TCONS_00063081 (transcript) - C. hemisphaerica

Overview
NameTCONS_00063081
Unique NameTCONS_00063081
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2890

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00063081 ID=TCONS_00063081|Name=TCONS_00063081|organism=Clytia hemisphaerica|type=transcript|length=2890bp
TTCCTATCGTTTCAAGCACTTCAGATACGGCGAGATATCGATACAGTAAG
GACACGCAATAGAGCGATTTCCAGTTCTGCTGGAGAGTGGCTTGACAACT
CGCAGTTCTAGGATTGTATCAATATTGTGTGTGGCGATTTAGAATCTGTT
CAAATACTATCGTTTAACTTGTTTAAATCTTTTTATACCGTGAAAGCGTC
GATTCTAGATTTCACTAAAattcaatttgttgtttttgttggtatttTTA
TCTCTTGCTTTACGTGAGACGGCAAAAAATTTCGTGATATAAGTTTCCGC
ATTACTTTGACATAAGTTCAAGTCAATAACTAGGAAACGATTAAGTATCT
CAACAGAAAGGAATTTCTACACAAGATAATATGATTTTACTCAGTACCTG
gcattttttatagaaatttaaagaattattgaaaaattagAGTCCGTCGA
TTAACCAAATCAAACCATGAAGATTTTAATATCGCTCGTTTTGATTTTAC
CTTGCTTATGTCAAGGGTTGGAGTTTATTGGTAAACGGAATTTAACAGGT
GGTGATACCATCAAAAATTGTGAAGAAGGGTTATTGGGGACTGTTGATGG
ATGCAAATGTCGTTTAGATAAACCCATTTTCCATGTGTTGAACAATGAGA
GTTATGGATGTACTAATTTCAAACAGATTTGTAAAGTATGCAAAAACAGT
GGCAAAGGATACATTAAAGGTGAGAACGAAACATTGACAATGGAACTCCA
ACTTCCTCTTGAATCGATCGAGCAAAAAACCAAAGAGAATTGTTCTATAT
CGGATTGGATGGTGGCTTTTCGgGTCAATCAACAACACGAGAtgatagag
ctatttcaaaagaaagcAAACATCACTTGGAGTTCTTCTTATCTCAAACT
CATGATTGACATTGACAATATTCCATTCAACTTGAGAGGGAAGCTTGGTA
AAATACAAATCTGGTGCATGAAAGAAAACCAAACAGAGAATGAGGTTCTT
GCAACCAAAAAGGAAAACAGTTTTTTGGTGAAGCTAGATGGAGAATTCAC
CCTTCCAGATAACACAACCTACTTTTTCATCACCACGCCACTACCGCCTA
CTACTACCATTCCCATTTCTACCATGGCGCCCGATGAGGACTCCAAAAAC
ATGATATTTTACGTCGTCATCCCAGTTGCTATCTTCTTGATCCTCATCTG
CATCATCGTTTTGTGCATTAACAAAAGGGATAAGAAGCAACGAGAGAACA
GCTATAATTTCAAAGATCCAAGACTTAGTGGTGACTCAGCTTTCGGAATG
TATAACGAAGCATATGTAAATGATACGTTGGACGGCAAAGCGAAAAAAAA
ACCAAACAACAACGATTCTTTAAAAGATTCAAAAGGGCCTACAAATGATG
ACGGTATAAACATTTACACTATCGTTGATTTATCATCACAAAACGTAGCG
GAAAGACCCGTCCCTGCAGAACGGCCAGTTCATCAAATGGGCAACGAGAA
ACAAGCAGAGAATGCGCTATATGAATCACCATATGAATCACCAGTCGATT
TCCAACGAAAACCGAGCTCCGATACTGATTCCGATATTCCGGACGGAAAA
TATCGGATTTTATCGAATACAAACTCGGGATCAGATATGAGTGACCAGGG
ATCAGAAAAAGGGCCGGAAGTGGAACCAGAGAAAGTGAAAGAAGAAGATC
TGAAAGAGGAGTGTGATGAAATCGTTCGGGAATGTGAAGAAAACTACAAA
CAAATGAAAGGCGATGGAACGTTGAAACGTTTGAAGCGCAAGAGCAAACA
ATACAAATTTACTGATTTCGATCATTTGAATGTTTCAACGGAAgaacaaa
aaattgatgacaGTGACGACGACGATTCGTCGAATGATGAGAATAGTGAC
TCCGATGATAACGATTCGGTCGGCGACAGTTCACATATCTATGAAACAGA
TGAAGATAGACAACAATCTTTTCCTAACGTCACTATCCTCCACTAACtgt
aaacattttatttttcatactaaacaatagaccttttcataaattacatt
aCGAACaccacttgcctcgttttgaaattatttccatggtgattaaatcc
cagcggattttattaaaactattttttatttataaataaatcatttaatg
tctcgagagacataatcaccatggtaattgtttgaatacgaggcaagtga
tgttcgtgacgtaatttacgGAAAGGTCTATCTACTAATTCaaatcgaaa
attgaaaattctcaaagtacaaaaacctttttaaacctgCATCTTTTAAC
CATTGTAGCTcttaagtgaaaaatttaaaaagtgtgaaACTGGTAGAACG
ATCTGGAAGCCCCTAACAGTCCTTTTCGCCATTAACTTTAGTCTTTTTTG
TTCTTGTTTATCTCCAGATAACCTGACAACAGATTCTGCACTTTCTGACT
cagtacgctgaagctctaaataTATGCATGCATATATACTTCTCAGAGGT
TTTAAAGCTTCAGCGTGTCACGTTAATAAAACTCCACATTTGTTATTGAT
CTCCAGATAGCTCAAAAATAAAAGTAGTTGAAGACCAAACCTAAAGCTGA
TGGATCCATCGTGAATTTTAAGCATAAAATATTGGATTGAGCTGATGTGT
CTATGAACCAAAAACTCaaagcattttttttttaattcaaaatatttaat
tgtaaataaaatatatctacttgtaaatattttttaatcttcttattttc
ttttcaatatttcgCATTTTTCATACTTCTTTATACTGTaccttcttttg
aaaaaaatatatcacaaTGAATCTACCGACGTTGTgtgcagatttgtaat
aaatgcgcagatttgtaatacctgcgccaatacacctttt
Run BLAST on NCBI

transcript from alignment at scaffold_38:39149..52637+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00063081 ID=TCONS_00063081|Name=TCONS_00063081|organism=Clytia hemisphaerica|type=transcript|length=13489bp|location=Sequence derived from alignment at scaffold_38:39149..52637+ (Clytia hemisphaerica)
TTCCTATCGTTTCAAGCACTTCAGATACGGCGAGATATCGATACAGTAAG
GACACGCAATAGAGCGATTTCCAGTTCTGCTGGAGAGTGGCTTGACAACT
CGCAGTTCTAGGATTGTATCAATATTGTGTGTGGCGATTTAGAATCTGTT
CAAATACTATCGTTTAACTTGTTTAAATCTTTTTATACCGTGAAAGCGTC
GATTCTAGATTTCACTAAAattcaatttgttgtttttgttggtatttTTA
TCTCTTGCTTTACGTGAGACGGCAAAAAATTTCGTGATATAAGTTTCCGC
ATTACTTTGACATAAGTTCAAGTCAATAACTAGGAAACGATTAAGTATCT
CAACAGAAAGGAATTTCTACACAAGATAATATGATTTTACTCAGTACCTG
gcattttttatagaaatttaaagaattattgaaaaattagAGTCCGTCGA
TTAACCAAATCAAACCATGAAGATTTTAATATCGCTCGTTTTGATTTTAC
CTTGCTTATGTCAAGGGTTGGAGTTTATTGGTAAACGGAATTTAACAGGT
GGTGATACCATCAAAAATTGTGAAGAAGGGTTATTGGGGACTGTTGATGG
ATGCAAATGTCGTTTAGATAAACCCATTTTCCATGTGTTGAACAATGAGA
GTTATGGATGTACTAATTTCAAACAGATTTGTAAAGGTAAGTGTCAAATA
CTTCTTTaactgttttcaaatctttcgtTTAAAGCATTCTTCCTGGCCTA
AAAAGCgaaaaacataaggctttaaTCAAAACTCAGATAGCACGAAAACT
CAACGTACATAACTATGTTATGTCCAAACTGGTTGACgctgaaattttct
taaatttacgAAGGAAagtattttccccattttcccTGTATGGGTATCTA
ATGCAAGGCGGTTGTTTATGCCAAGAGGGCGGTATCTTTCTTTCGCATGC
ATTCTAAATACAGTCAATTTGAGTTTTAAAGGGGGAGGTTTCATTATAAA
GATCCAGTCTGGACCCTGCTGTAGGTCAAggaagatgaaatgaaaagtgc
AAGGAAACGTATAGCGTAACCCGCATCCCAGCTGGCTCTCAACGTTaatt
caacgttcatctaacgttacatGAACgctatgaacattagataaacgttg
aaacaacgttatgtgcagCTGGGTTATCTTAATGAAAGAGATTGACTTTG
AAACCTCTCATCCCAAATATTCAAGTACAGAACGGCCtgaatttcacttt
ttcccTCCTATGAAAAATATAACATTGTAATAGCTACATAATCACTGTGG
TTTTACAATCCTTCTTTCTCtagcaatagaccttatcgggttttttattt
ttctaaaaaagcgatgcattgtgggattgtttcgagtgtgttacaataga
aatctcttaggaactCCTTgaggaaattctattgtaatacactcgaaaca
atcccacaatgcatcgcttttttagaaaaatcaaaaactccgataaggtc
tattgttcCACAAAATTTGCACAAAACTGACgttattcaatttgaaaata
tcaacCGGCTAAAATGATGTCAAAATAGCACTTAGATGAAGGTTGATGGA
ATGTATAGCTTAGTACTTATCAGTTTCAAAAGGTTATGGATTAggtattt
caaaaaaagatacatTCATATGCGTAAGAATACAAGACTATCATGTCGTG
ACATATTCTGACTATTGCTTTATCTATTTCCTAGTTTTTCAAATCTATAT
CGCATTTCATCACAATACTGTATGGGAAGTGTTTCAACATATAGATGTGG
TGGTTTTATCATATTTAAACGTCTGCGTTGATTCATTCGCGAGAAATCCT
ggaatcccagctggcacataaaaacgttgttttaacgtttatctaatgtt
cacaacgtccatataacgttagatgaacgttgaaacaacgctgcATGTCA
GCTTGATCCATAAACTCCAGGGTACCCGATTTTATCAGCTCTTTAGGAAA
CTCCCTGCGTGACTAAAACAAAGAGTTTCAATTGAACACTGATAAAAAAC
AGAGACATATTGAACCTTATGAAATACTTGTAAAATTAATACTTTTTATG
ATACAATTAGTTTATGGTCAATAGGTTGTAATTAACAGATACCTTGCTAA
CGAGTCGATTAGTTTGAGTTTATTAGATATTTCATTCTCTATAATACATA
TATTATGAGAAAGCCATTACATACCTCTTTAATTAAGCGATTAAATTATA
CAGTTAGGAGTATGGATAATGAGccacacacttttttataagaacaaact
atataagaacatggccaaaatattaagaacaagttatgaACATTTCAATT
AATTTCATTTTGTGGGCTCTCAATcactcaatttcttaggaaaatggagc
AAATTACtcacaaaaggtgaaaataagaacatgttataataggcttgaaa
ctcaaaaagttaagaacatccgaaggcttcaaatattttggatgttctta
caacaaaaaacgtgtacagtatTAAAAATGTAACCTATTGTTAAATTGAA
CTTCTGCTCAAATTCAACCTCGTACCAGTTTGTCGGTGTGTCGGTATCGA
CCTTTtttgcgtcggtatttcggtgattaacaaaaaatgtgtcggtattt
cggtgtttgagatgcttttcggtgacggaaaatgttaaatttttaaTCGG
TGATACGGTAATTTTTCTCGAAACGTCAGAGAAACGGTGCTAAAATCAAG
GTTTATTTCTCAGAAATCCCTCCAGTGTGATATGTCatattagaattttg
aaaaaaacatgatATCAAGGAAAATGTTGTATAACATTTTTTATCTACTT
GGAAATACTATTCATCTTTTGTCGACAGCTTGAAAAAAATGTCGGTGTCG
GTATTTCGTAAAAAATGTGTCGGTATTGCGgtaattttgtgaaaaactgt
cggtatttcggtgtccagGACCCTCCCCCCCACCTCTGGTAGAATAACGT
TTTAATTACCAATTTTTTCTTATATCAGCGAAACTTCTTTGATAGAAGtt
cgaaaaattagaaaattgactccaaagaaagacaaaataacGAAAACAGC
CTATTTGAAGGTTGCGATATAGGGTCGTCAAAAGGTTTGATTCGCGAAAA
AGAttctcaaaaactttttgttcgGTCAGgtataaagattttgaaataat
ttgcgAGGTATGTTTCGTTAATTAGAATGTTCACTCAGCAAATTTGAATA
ACTAAAAAATTAGGTAGTATTTAGCGGTTTGTAACAACATTTTTCCAATA
ATCTATTTGTGGTTGACCAAGAGTGAATAATTTCACTTTTGATGAGATAT
GCAGGTtaaaaatttggggaaaattgtcattaaatCAATATTAAAAGTCT
TTAGTGGTGATAATCACCTTTTGTTAACTCTTATAAATCAAGAACgggta
aaaaaacatttttttccgttCTTGATTTTCTATATTATATATTGCACTTA
TAATTATACTGCTAAAGTtgtacacgtttctttttttataacaatcacct
aaaattctttaaaccttctgatgttcttattaaccttttaagttttaagc
cttaagATGATCTTGTTTTCACTAATTTGCGAATGTTTCCTAATAAATTT
GGTGTTCTAGAGTCCAGAGCCTAAGGTTCCCATCATATAGGGTTTGTTCT
TTTAAATTCTGTGTATTCTACTAAATTGGTCCAAGTATACTTTCACAATA
CCAGCTTTACTGAATTGCTTCCTCATTTAAAACGCTTTGACGTACAAAAG
TTTCCTTGAAAAACTCTTTGATGAGCTTCCTTTCTTATTTCTGTTCCTTT
GGTGGAAGCTAATGACGGTCTAAAATTTTTTAGTATTTGACGTGAATGGc
ctgtacacattttttttcttttataagaacaattctatAAGAGCAATGAG
GCTTAAGATcgcaaagaaaaaagaacaatttaagaacaacgcTGAGAACA
ATGCCAATTAAttaatttcaaacaatttaggggccaaagtagtaaaaatt
gggtatagcACTttaaatacctcaattacaccctataaataagaacaaga
taacaaaaatttgaggctgaaagtgccaaaaaataggAACAGTCATCGAG
CCTTAGCAAAATTTTACTTGctcttataaacaaaaaaagagtGTAGAAGA
TGTAACAACGTCCATCTGAAGCCCCTGACATCCATTCAACGTTAGATTGA
CGTTATTATAACATTCGGTGACGGCTGGCTTTGGATGAATAGCGTGCCAG
TGTCGGAAAAATGGTAATTAGGTTaagcaaaacaaaatattaaaaaaaca
tatttcattAAGAAAGAGATTGATCGAAAACTGACTAATAATAGATTCTT
CAATTGTCCTTGTAAAAAGGAAATCTtaaatttctgatatttttggaaag
ctaaccGTTTGTCATTATGTCGTCAAGATTTTGACATATTTGCACTTGCA
AACAATTTTGACGGAGACAAGGGGCAGAAGTAAACAATCTTCAATAGCTT
CCTGGAGAAGGAAAGATTAAAATAGGAAAGACGGGTTATgttatgaaatt
ttaaaatatcagTGCTGAAGAGTTCTATGTCTTTGATTAGGTGCTTTGGA
ATAATTAAAGAGAATTTTTCAGGTGACTGGATTTGTGTTTGTTTCCAAAT
CGATCATGAATTGATCTTAGCATTGATCACAAAAGCTTTACTACCTTATc
gaccctttttacgccggcccttattggcgttatttttaggaCCTTGGCGT
AATAAAAGGGctggtgtaaaaagggccaaaatgttgcaaattttatttaa
aagtggcgttaatcttttatcattatttctcaatttaaaggattttagta
tgatttgaagacaaaaattatccattgttttactccatatctaaaacttt
gcaaaaatcagtgattttcaatggaattttcaacagattactactgaaaa
atgatattttaatgtaaattgaagcataaatagccattctaacaaatttt
ggcgttatttaccgCCCTAATTAGCGTAAGCCTAAAatcaggctgtggcg
taataagggccagcGTTAAAGGAGCCTAAAAAGGGCCGtatataaaaata
agaacatttgttaagagcatttttaggcttaaaactcaaataattaagaa
tatccgaaggcttcaaaaatgttggatattcttattaaaaaaatgtgtat
acaTTTCATTTGCATCGACTGCTTCATTTTCTTATGTTCACTAGATACAA
AATCTTGACGTCAATCGCAAACAAAACATTGCAAAGGTTCATTAATTATT
TCCTGGCACTAATTGaacaaaaaatccaaaagagaaagactttttcattt
catgtaatccaaaataattaattttttcttcgttttcgGTATTGCATTAT
tgcaaaaataagattttctgaATGATAAGGTCGTTTAGCATGAGAATAAA
TTCAGCCTAGTAATGAGATGACGTTTTGCCAATTCCTAATTGTCAGTACC
GTAAAGTTTTTCTCTgacaaatcaaaaataaatacagTGTTTTGGAAATA
CTTTTATAGCTTCAAGTTCAATATTAATGccaaaagataccccaaaagtA
GTACCCGAACTTTTTAGTTTATTCCTCattatttatttgaaatttcggAC
TAACAAAGTCAGAATTGTGTAGGTATTGCGCAATTTTAGCTCAAATATGG
AAATTACACCTCATGGGTGAAAaatatttggaactttgaaatATAGGTTA
TATAGGAAATTAAGCTGTGTAGGAGTCTATTTTCATCGCTACCATAATTT
GAGATACGCCATGGCAGTCATTATAAAAcgatttatgaaaaatttcaatt
tttgaaaatatcgatTCCTACTCGAATGGTACAAACATATTCCCGATACT
CTAGCGGATACTAAAGAactgaaaatttctttcaattcaCTTTCCTGAAT
ATAATTAGTACTCCTATGGACAACCCATGTGGTAAAATTGCACCACCTAA
ATGTTTTTCATATCACATTATATCTATGCAAGGTAAACATTTCATTAAGA
CGCAACTTATGTATAAACAAAGtgtaaaacaaaaacagaatgaaaatttt
tcaggaaatcggaTTGGAGAGTTGAACTTGATGTTCGGATTAGATAAGGA
TGCGATCAGGAGTCAGGTAAGATTAAAAGTGATACTGCCTTccagaaatt
gagaaaaaaaaaaaaagaatagcaACTTTCAATTGTTGATACATAGTGCT
TGCTCCATATACCATAAGGTACATCACTTATAATCGATCAGAATAGCGCA
GTGCCCACCCGGGGGGGGGCTGAGCTTGACGGCCGACGGTGACGTGCCGc
tagagtttgaaaagtggaccctgtgagaaaatcgaaaaaaatttcccatt
ttcaccctaaAAAGTGGCAAAATGTAGACAAAAGATTGAAAACTTTTCTA
ATGTCCAACCTGAAAATTATCCAGAATAACCAAAAGACGACCATACCAgg
taaaaatgttgaaattagtaaatttggaaccctgtcagatatcttcagag
cctaaaaaagggaccctgaccagcagcACGTCTCCGTTCCCAATTTCGCA
CGTGCCTCCCCCGGGAGTGCCCGCCCTGATCTTTCTATATCAACTTAACT
ACTATAACTTTGTGTAAAAAACTTTAAATGACCTTATTAAAGGTTTTTAA
CTGCTTAAGTTTAAAGTAGCAGGACGTCACCAATGCACTAATAAACGGAA
ATctgtaaaaattgtaaaacatACCTACATAGAAACAAATTTAAAGATCA
TCCGAGCGTTAGGCGTAAACGAAGAATGAGAATTAGCAACAAGCCTCTCC
CTTACGTAGTACAAAAACGTGATTTAAACTATGTCCTAAATTGATTCACC
ATGGAGGATGATCTCTAGTTGATCGAAGTCAGCACTTTCATccaattttt
tcttgaaattcacACAAATCTATCGGTTCGCTTTGAGCACAAATAATCAT
TCAAGTAAAGCTGCAATTAAGTATACTTTGACACTCTAGATTCATGAATT
TGAGCGGAAATCTTTCATATTTTACAcattcattgggcttttccagttAA
AATCCGTACCCCCCACGTTGAGGATatccattttcaaaattgttaagATG
CAAGATGTGACTCAAGGAACtcttttctcacagacccactgggaaccctt
ccaaCTGGATAAATTGTCCAATTTATCGTCCCCGGTGtgaaattatcctc
caattttcgTCCCCACTGATGATAATCAAATAGGCCAATCCTTACAGTAA
AATGCTATGCTATTTTCCTATATCCACTGTATTTTCTGActaacaaaata
attgaaatccctAGGCATGGAAAATATGGGAGTatcatcgagtttcagtc
cgttatttttatccccgctggctgactaaatcctaccgggtctgtgagaa
ggggtgttcaAGGGCAGATAGAACAAAGAAAATTCAGATTTGATAAAATT
ACTTTCTTCCCTCTTTACAGTATGCAAAAACAGTGGCAAAGGATACATTA
AAGGTGAGAACGAAACATTGACAATGGAACTCCAACTTCCTCTTGAATCG
ATCGAGCAAAAAACCAAAGAGAATTGTTCTATATCGGATTGGATGGTGGC
TTTTCGggtaattttgtttttatcatttaCAAGTTTCTTGATAGCAAAGA
TTCGTTATTTTAGGTGACGGCTGTTAAGTAATCGTAGGTATAGGAGAATA
ATTATTCCTTGTAATTTTATTAACAGTCCCCTAAAAACCGACTGTGTGGC
TAAGCAGGGTTGATGGGTGTTTACTGGAAATCTGGAAAGATATTCATTTC
ATTAGAGCTAAANTCATTTACAAGTTTCTTGATAGCAAAGATTCGTTATT
TTAGGTGACGGCTGTTAAGTAATCATAGGTATAGGAGAATAATTATTCCT
TGTAATTTTATTAACAGTCCCCTAAAAACCGACTGTGTGGCTAAGCAGGG
TTGATGGGTGTTTACTGGAAATCTGCAAAGATAGTCATTTcattggagct
aaattttatgaCCTAAACGAGAAAATCTTTGAGATTGTTTGCTTTGATTT
TAGGTCAATCAACAACACGAGAtgatagagctatttcaaaagaaagcAAA
CATCACTTGGAGTTCTTCTTATCTCAAACTCATGGTAAGTAAGCGTTGTC
GGCAAACAAtgtcgtttcaacgtttatctaatgttcacatcgtacatata
acgttagatggacgttaaaATCAACATTGCGTGTTAGCTGCTGGGAAGCA
TTGAAGTTTCTCACTTCCTTGTATTGACTAGACGGGTGCTCAAAAGTTAA
GATATTGATAACGGAATCAGGGAAAATAATTGTTCTAAGAAATAACAGAA
GAATATCCATAACTCGAACGGACACAAGGTTTGAGTAATGAAAGTTTCGA
GTTTCGGagtttcgagttaaagagactccaatTGTACTATAATATTCCTG
ATTTGTAAAGTGGGTTTCTAAAGCATATTATATATTGACCACTTGGCCAC
AAGgaagtttcaaaaattaagGAAATCATAACAAGAATAACATCATGCTG
TAACATGGTAATATCATGTTATCCATAATTACCGGAATTCGTGAATGATA
TTGTTCACTGCGTTTAGtataatttcattcaaaatcatATTGATGTCACc
tacaaaatttttatttttccaacgCTAGGAGTGGGAGTAACTTCTTAATC
ATAATATTTTGGAGTATGAAAATTAAACGATTAGTCCTACATTAAAAGAT
AGTTATtgaacaattttttatttcgCAAAACTCAAATTTTGTAAGCCGTT
TACTTCTAAGAGTTTAATTAGTTAAAAAGGCAGACAGTTTTATGACTCAT
TGGAGCGCGAATTGGACAAACGTAAAATCTCTCAGCAAGACAAAACAGTA
TAATTAATAACCTGTTGCATAAGAAATGCTTatgaaattaaagaaattga
tACAATTTAGCTTATAGCAAACTGATCTATCGTAACATCATTAAAGGTCA
TTTAATTAGGTTCATTAACTATGGAAAGTTCATTAAGAAGTTACTTTTCC
TACTAACACTAAAATGACCACACGTATAGTTCACTAAATCATAGATTTAG
ATCGTAAGATATTTCATACATATTAACACCCCCTGTATCACAGCCCTGGT
GGTACTCCTTATCACAGCAATTTCTATCAGAATCCCAGGGGGAGGGGTAG
AATTTCTATTTTTCCCAGGTCGAATCCAGTTTTGGAGTGCagtttttcca
tataatttcaaatggggataaaaataaaatcaattttctaattGCATGGG
GTCCTGCggggtctgtgacacatgggTTTTAAATTATGACCGTCTTTCGC
AGTCTGACCACTGACCAAAAtttttaacatctttttaactAAAGGAAAAG
CATccaaaaagtgttttaaaatgaaaataaaattcactTGTGTCTTTCAA
CGATTGAAGCCAAAATGAAATCGTTATTACTTTGAGATTTTAAAGCtaaa
ttttatgatatgcccCCACAAACCGATTTATAAtcgtaaaattcagaaaa
cctGTTGTAATATGTTTTTGTCGaagtttaaaaagtttcaaTACTCAAAG
TTTTTAGTACGATCCAGGCCAGGGTGATGGAAACCGTCTTCCTCTGATCA
GAAAAGAGTTAATAAAATCAATGTAATCAAATATCTTTACTTGAACCATG
TAGATTGACATTGACAATATTCCATTCAACTTGAGAGGGAAGCTTGGTAA
AATACAAATCTGGTGCATGAAAGAAAACCAAACAGAGAATGAGGTTCTTG
CAACCAAAAAGGAAAACAGTTTTTTGGTGAAGCTAGATGGAGAATGTAAG
TGGGCCTCTTTCCTTTATCTTTTAGATTATTGGTGACACTAATAAACCCC
TTAATTTAGTGCTAAATCTTGTGCCAGTGCCAGAGCTTAATGCCTTAGCT
ATCTACAAATCCAAGTCATACTACAGGACCTTTATGTCACCATTTTACGT
CAACTTTCAAAGACTAATTTTATAATTGAATTCTAAAATTCTAatcattt
attaaattaagtttCTCTAAGGAGTTGGAGCCCATCAAAGAATGAAACCC
ATTAAAATTAATATCTTCCTTCTTTAAACAGTCACCCTTCCAGATAACAC
AACCTACTTTTTCATCACCACGCCACTACCGCCTACTACTACCATTCCCA
TTTCTACCATGGCGCCCGATGAGGACTCCAAAAACATGATATTTTACGTC
GTCATCCCAGTTGCTATCTTCTTGATCCTCATCTGCATCATCGTTTTGTG
CATTAACAAAAGGTTACAAAAAAGGTTTCAgtttttgtcttttattttca
aagtttctttcTCGAGTACTATAACTTTATACCGTCTTTATCATAAGAGG
CTGAAAGGCAGATTGTGTTGAAAGTCTGaaagtgaaaacaaaagtaCATC
AACTCTTTCCGATTCGGGCCTTTTTTTCGGATTCTTGTTGTTCAATTTGC
AATATTGGTTTGGGTTCAGCTGGAAAATCGTATAAAATACTTTTTGTAAT
CAGGATCACTCTGCACttcgaagaaaattctaagccgtcccttgaagatc
gaattaaaaTCGACTGTATTTTCTTGTCATAATGATTCAGAAATGGTTCT
ACTCCTTCTGCAATTAACCTATAAACCTGTGAATTGAGCactgaattgaa
attttaacattttttcatatttttcttcgcaTTTTCAGGGATAAGAAGCA
ACGAGAGAACAGCTATAATGTAAGTAAAGCAACATGCAGTGCAAATATTT
CGGACGTTGATCTGTCTaaattgattctttttttttgaaagatccAAAAC
ATTGTATTATCTAAAATCTCTCTCGGAAGTTTCCTTAAGATGAAATTGGC
CATTAATCAAAAAATGAACTACTTGACGAGCCAATGTAAACTATCTTAAA
AGATAGTCAAAGTCGTGTATCGTGTATGTAATGAATTGTAACTTTTGGTT
TTTTAGTTCAAAGATCCAAGACTTAGTGGTGACTCAGCTTTCGGAATGTA
TAACGAAGCATATGTAAATGGTAAGTAGACTGGAATATCATTCCTCGCCT
TAGTTTAACGTTATTATTTGCTTACAAGCAAGCTTAAACCCCCCCTGAAA
AGAGATATATATGTAAATATATTTAAGGACAAAACAATTCTAGAATACCT
CTGCCCATTGCAgtaaaatcacgaaaattatTCAAGTTTAATGATTATCA
CCGTTTGAAGGttctttgtcatttttttcgagcgttttgaaatattttat
ttcaaatgttTGTTCTTACAGATACGTTGGACGGCAAAGCGAAAAAAAAA
CCAAACAACAACGATTCTTTAAAAGATTCAAAAGGGGTAAAGATCGAAAA
TTTGTTTCTGAGAAAGTTCTGTCACGTGATTATGATATAATACAATTCAT
TCAAGAGTATTGACAAATTTAACCTCCCaaagtaaaatatttattttttg
gagGTCAATTTTACAGATTTAGGCAATCTTGTACAAAAAGTCTGTATATA
TACACCCCTCTCTCACaaccccggtgaaacttttttttaccagtggaata
aatattttgatcgaaatctcaatggggatagaagttCTTCTGTTCTCAGG
ACATAAAATCCTGCGGGGAtagttttggagtacaattttttttccattga
atttcaattgTGAATGGtaagaaagtcaattttctagTGGGGCTGAAAAT
ATTGGGTATTCTTCCCACTGGGGACAAAATATTGGCCATGTTTTCCAGGG
GAGCTGAGGTGCCACCGATACTGTGACACATGGGTGTACATAAGAagatg
gatatctttatttaagattttcatatttattttcagCCTACAAATGATGA
CGGTATAAACATTTACACTATCGTTGATTTATCATCACAAAACGTAGCGG
AAAGACCCGTCCCTGCAGAACGGCCAGTTCATCAAATGGGCAACGAGAAA
CAAGCAGAGAATGCGCTATATGAATCACCATATGAATCACCAGTCGATTT
CCAACGAAAACCGAGCTCCGATACTGATTCCGATATTCCGGACGGAAAAT
ATCGGATTTTATCGAATACAAACTCGGGATCAGATATGAGTGACCAGGGA
TCAGAAAAAGGGCCGGAAGTGGAACCAGAGAAAGTGAAAGAAGAAGATCT
GAAAGAGGAGTGTGATGAAATCGTTCGGGAATGTGAAGAAAACTACAAAC
AAATGAAAGGCGATGGAACGTTGAAACGTTTGAAGCGCAAGAGCAAACAA
TACAAATTTACTGATTTCGATCATTTGAATGTTTCAACGGAAgaacaaaa
aattgatgacaGTGACGACGACGATTCGTCGAATGATGAGAATAGTGACT
CCGATGATAACGATTCGGTCGGCGACAGTTCACATATCTATGAAACAGAT
GAAGATAGACAACAATCTTTTCCTAACGTCACTATCCTCCACTAACtgta
aacattttatttttcatactaaacaatagaccttttcataaattacatta
CGAACaccacttgcctcgttttgaaattatttccatggtgattaaatccc
agcggattttattaaaactattttttatttataaataaatcatttaatgt
ctcgagagacataatcaccatggtaattgtttgaatacgaggcaagtgat
gttcgtgacgtaatttacgGAAAGGTCTATCTACTAATTCaaatcgaaaa
ttgaaaattctcaaagtacaaaaacctttttaaacctgCATCTTTTAACC
ATTGTAGCTcttaagtgaaaaatttaaaaagtgtgaaACTGGTAGAACGA
TCTGGAAGCCCCTAACAGTCCTTTTCGCCATTAACTTTAGTCTTTTTTGT
TCTTGTTTATCTCCAGATAACCTGACAACAGATTCTGCACTTTCTGACTc
agtacgctgaagctctaaataTATGCATGCATATATACTTCTCAGAGGTT
TTAAAGCTTCAGCGTGTCACGTTAATAAAACTCCACATTTGTTATTGATC
TCCAGATAGCTCAAAAATAAAAGTAGTTGAAGACCAAACCTAAAGCTGAT
GGATCCATCGTGAATTTTAAGCATAAAATATTGGATTGAGCTGATGTGTC
TATGAACCAAAAACTCaaagcattttttttttaattcaaaatatttaatt
gtaaataaaatatatctacttgtaaatattttttaatcttcttattttct
tttcaatatttcgCATTTTTCATACTTCTTTATACTGTaccttcttttga
aaaaaatatatcacaaTGAATCTACCGACGTTGTgtgcagatttgtaata
aatgcgcagatttgtaatacctgcgccaatacacctttt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_039512XLOC_039512Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00063081-exon-scaffold_38-1491911889:39149..39834TCONS_00063081-exon-scaffold_38-1491911889:39149..39834Clytia hemisphaericaexon
TCONS_00063081-exon-scaffold_38-1510915933:39149..39834TCONS_00063081-exon-scaffold_38-1510915933:39149..39834Clytia hemisphaericaexon
TCONS_00063081-exon-scaffold_38-1575043694:39149..39834TCONS_00063081-exon-scaffold_38-1575043694:39149..39834Clytia hemisphaericaexon
TCONS_00063081-exon-scaffold_38-1491911889:46719..46855TCONS_00063081-exon-scaffold_38-1491911889:46719..46855Clytia hemisphaericaexon
TCONS_00063081-exon-scaffold_38-1510915933:46719..46855TCONS_00063081-exon-scaffold_38-1510915933:46719..46855Clytia hemisphaericaexon
TCONS_00063081-exon-scaffold_38-1575043694:46719..46855TCONS_00063081-exon-scaffold_38-1575043694:46719..46855Clytia hemisphaericaexon
TCONS_00063081-exon-scaffold_38-1491911889:47302..47382TCONS_00063081-exon-scaffold_38-1491911889:47302..47382Clytia hemisphaericaexon
TCONS_00063081-exon-scaffold_38-1510915933:47302..47382TCONS_00063081-exon-scaffold_38-1510915933:47302..47382Clytia hemisphaericaexon
TCONS_00063081-exon-scaffold_38-1575043694:47302..47382TCONS_00063081-exon-scaffold_38-1575043694:47302..47382Clytia hemisphaericaexon
TCONS_00063081-exon-scaffold_38-1491911889:48952..49093TCONS_00063081-exon-scaffold_38-1491911889:48952..49093Clytia hemisphaericaexon
TCONS_00063081-exon-scaffold_38-1510915933:48952..49093TCONS_00063081-exon-scaffold_38-1510915933:48952..49093Clytia hemisphaericaexon
TCONS_00063081-exon-scaffold_38-1575043694:48952..49093TCONS_00063081-exon-scaffold_38-1575043694:48952..49093Clytia hemisphaericaexon
TCONS_00063081-exon-scaffold_38-1491911889:49380..49560TCONS_00063081-exon-scaffold_38-1491911889:49380..49560Clytia hemisphaericaexon
TCONS_00063081-exon-scaffold_38-1510915933:49380..49560TCONS_00063081-exon-scaffold_38-1510915933:49380..49560Clytia hemisphaericaexon
TCONS_00063081-exon-scaffold_38-1575043694:49380..49560TCONS_00063081-exon-scaffold_38-1575043694:49380..49560Clytia hemisphaericaexon
TCONS_00063081-exon-scaffold_38-1491911889:49987..50017TCONS_00063081-exon-scaffold_38-1491911889:49987..50017Clytia hemisphaericaexon
TCONS_00063081-exon-scaffold_38-1510915933:49987..50017TCONS_00063081-exon-scaffold_38-1510915933:49987..50017Clytia hemisphaericaexon
TCONS_00063081-exon-scaffold_38-1575043694:49987..50017TCONS_00063081-exon-scaffold_38-1575043694:49987..50017Clytia hemisphaericaexon
TCONS_00063081-exon-scaffold_38-1491911889:50255..50318TCONS_00063081-exon-scaffold_38-1491911889:50255..50318Clytia hemisphaericaexon
TCONS_00063081-exon-scaffold_38-1510915933:50255..50318TCONS_00063081-exon-scaffold_38-1510915933:50255..50318Clytia hemisphaericaexon
TCONS_00063081-exon-scaffold_38-1575043694:50255..50318TCONS_00063081-exon-scaffold_38-1575043694:50255..50318Clytia hemisphaericaexon
TCONS_00063081-exon-scaffold_38-1491911889:50570..50634TCONS_00063081-exon-scaffold_38-1491911889:50570..50634Clytia hemisphaericaexon
TCONS_00063081-exon-scaffold_38-1510915933:50570..50634TCONS_00063081-exon-scaffold_38-1510915933:50570..50634Clytia hemisphaericaexon
TCONS_00063081-exon-scaffold_38-1575043694:50570..50634TCONS_00063081-exon-scaffold_38-1575043694:50570..50634Clytia hemisphaericaexon
TCONS_00063081-exon-scaffold_38-1491911889:51135..52637TCONS_00063081-exon-scaffold_38-1491911889:51135..52637Clytia hemisphaericaexon
TCONS_00063081-exon-scaffold_38-1510915933:51135..52637TCONS_00063081-exon-scaffold_38-1510915933:51135..52637Clytia hemisphaericaexon
TCONS_00063081-exon-scaffold_38-1575043694:51135..52637TCONS_00063081-exon-scaffold_38-1575043694:51135..52637Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_38supercontigscaffold_38:39149..52637 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0396648	0.0257646	0.0601974	0.17581	0.0177689	0.042176	0.0847119	0.127196	0.0668717	0.123885	0	0.0264673	6.57463	5.25369	7.58499	9.70874	4.2548	5.3159	0	0	0.0513533	0.0187613	0.0760352	0.0415347	0.0141818	0.0126476	0.583169	0.215187	0.236734	0.225879
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00063081 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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