TCONS_00063055 (transcript) - C. hemisphaerica

Overview
NameTCONS_00063055
Unique NameTCONS_00063055
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length597

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00063055 ID=TCONS_00063055|Name=TCONS_00063055|organism=Clytia hemisphaerica|type=transcript|length=597bp
TTGATCTTTGTTTATCGCTTTTTTAGGGTGTCTTCTGTTCGAGAggtcaa
aaaattttaatggtGGATGCAGATGGTGCTACCAAATTCTCTGATCTTCA
ACATGTAGACAAAGCCTTAGATGAGTTGAAAGGAGGTAAAAATGGGATGG
CATTTTGTGTTGGATCGAGAGCACATCTTCAGGATGATGCAGTTGCACAG
agATCCTTCTTCAGGAACATTTTGATGTTTGGGTTTCATTTCTTAGTTTC
ATTTCTTTGCGTCAAAGATATAAAAGACACACAGTGTGGTTTCAAATTGT
TCACACGAAAAGCTGCACTGACATTATTCTCAAGCTTGCATGTGGAACGC
TGGGCATTTGATGTCGAACTTCTGTACATAGCGCAAAGACTAGGAATACC
AATCGAAGAAAAAGCTGTCAATTGGCAAGAAATTGATGGTTCCAAGATGG
TACCTATTTTTAGTTGGATTCAAATGGGCAAAGATTTGTTATTGATCCGA
GCACGTTATGTGATAGGGGCATGGGCACTACAGCCATCTGGTCAACCCAA
TTTAGTTGATGTTGATGAGGATTAGGATCTATTTATATTTTTCCCAA
Run BLAST on NCBI

protein sequence of TCONS_00063055-protein

>TCONS_00063055-protein ID=TCONS_00063055-protein|Name=TCONS_00063055-protein|organism=Clytia hemisphaerica|type=polypeptide|length=171bp
MVDADGATKFSDLQHVDKALDELKGGKNGMAFCVGSRAHLQDDAVAQRSF
FRNILMFGFHFLVSFLCVKDIKDTQCGFKLFTRKAALTLFSSLHVERWAF
DVELLYIAQRLGIPIEEKAVNWQEIDGSKMVPIFSWIQMGKDLLLIRARY
VIGAWALQPSGQPNLVDVDED
Run BLAST on NCBI

transcript from alignment at scaffold_379:3163..31926+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00063055 ID=TCONS_00063055|Name=TCONS_00063055|organism=Clytia hemisphaerica|type=transcript|length=28764bp|location=Sequence derived from alignment at scaffold_379:3163..31926+ (Clytia hemisphaerica)
TTGATCTTTGTTTATCGCTTTTTTAGGGTGTCTTCTGTTCGAGAggtcaa
aaaattttaatggtGGATGCAGATGGTGCTACCAAATTCTCTGATCTTCA
ACATGTAGACAAAGCCTTAGATGAGTTGAAAGGAGGTAAAAATGGGATGG
CATTTTGTGTTGGATCGAGAGCACATCTTCAGGATGATGCAGTTGCACAG
GTACTACCAGTGGTTTgttaaattaattttgaatgaGTCATTTCATGCAC
CAAATTATCCCGCttcaggcacgacggaagctttttggacctaccccggt
aaGGGTCCTATAAAATTAACCTCTATCTGTTCAACCGTCCatccgttcgt
taccaacttttctcgagattggttaattagttttttgcacaacaatgtgt
aactataaaccctcgaatgtgacggagcccgattttcaaaaaaaaaattt
tggcccaaaaaacggctaaaaaacgggttttttggactttgtgaaaaatt
gaatcattaatttttttgcatgaaagtagggtaacatcacaggtaaaaga
tggctcaagcatatttttgcaaaaaacatTTGTTGGCTCacaaaacgcat
gtttatctataagaatcactattaataagcatatatcaatgttcttagtc
aacttactcaatttttttatgagatagatgttttttttttgcttaatttt
gaagaatatatgtgtgttgcttggcgtgtttttatagaaaaactggccaa
attcgatattNATTAATAagcatatatcaatgttcttagtcaacttactc
aatttttttatgagatagatgtttttttttgctcatgagggcttaatttt
gaagaatatgtgtgttgcttggcgtgtttttatagaaaaactggccaaat
tcgatatttttttataagcacattatcaattacttaagtattagcttttc
tcgagattggctctttcattcttNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNggctctttcattct
ttatgattttttgcataaagatgcataactataaaccctcgaatgtgacg
gagcccgattttcgaaaaaaaaattatttgggcaaaaaaaacggctaaaa
aacgggttttttggactttgtgaaaattgaatcattagttttttctaatt
tttcgcatgaaagtagataaaagatggctcaagcagatttttgtaaaaaa
agaatttttcagctcaaaaaacgcatctttatctataagactattaataa
gcatacatcaatgttcttagccaaattactcaattttttgatgagataga
tgttttttttaatcacgaagtcttgaatatgaaagaatatttcaagagca
tgaaattttggtttctaaacgttttttttataagaaacaaacgactaatt
ttaatagatcgtcactatttgtgttctgaatgattgtttaatggtcacgt
cacgtagatatcaattactaggtcacagtgtggatgtaaaccacactgaa
acaactgccttccatcacgcatatCACGCTCGCTAAAaaagcgcgcgcac
attattaacgcctacatgtcatctccagtacattttagattattcattga
aaacaaatGACAATATAGTCaattttcatgtctcgattattcaattccga
ataaaagacattcagggaagaaaaaagagaaagacctgggtaatctagtt
aaaaaaaccaaaagtaaatggtagacaaagtaatgagccaaggcaaaatg
agattagcgtaccactatgaaagaaaccgccttcGGCGGTcgataaatgt
gttaaatgcataaccaggtaggtccataaaagtattacttgttatatctg
gtacggcgaatgaggaaatttaagtgattttatagcgattttaccgacga
agaggaaaatttcggtttttttttgtgaaaatcttgtACGGCAGTCGctg
tacctgccgtacccgtcgCGTCGTGCCTACGCTTGGTGAATTATTTCCAG
TCATGTGCAAATCGAAAATTTCTATCATACTAGGAAGTTAAGTTGGGTCT
GTGACAACGATTTCTCCATAAATTTATTCgtgacttttttctttgtttca
gagATCCTTCTTCAGGAACATTTTGATGTTTGGGTTTCATTTCTTAGTTT
CATTTCTTTGCGTCAAAGATATAAAAGACACACAGGtaatcaattcatga
tattcatgacgtaatgttttctacggaaataccccggttttagccagttg
TGATAAATTTagactagacaaaagttgtataaaatttaccACTACTGGCA
AAGACCGGGGTCTTTTTCCGTAgataacattacatcatgaacATCATGAA
TTAGCTTCATAATAAATATAACAGGGTTTTTATGGATCCTGAAAATGTTT
GGAGATGAATCTTCAAACccttgaaaactttgaaacctaaaaattttcaa
gagaaagctttgaaaaggttggttAATTTCATGTATTCGAATAAACTAAT
AATCCACAAACAAGTGGTAAGTAAAACCTTGAATACCATGAAATAAGATT
TAAGACAAAGTTCATAGACAAAACAGACTGTATACATATTGGTTTCGATT
CAATCCGATATTTGTTTCCATAAAAAGTTTCACTACTTTCAATTCACTAC
GGcaaagtcaagaaaaatttacaaaaaaatacgaatttaaatcgCCTTTC
TCaattttcctttattttgtATTAAATTAAAAACAGAAGATAAGTTTTAT
CCTTGAAGTAATCTTTTAAACGTGAGGTTTTCTTGGAATTTGGTTATTTT
ATTTATCACTACGCTTCATTCAGACTAagaaaaatcgctaaaaagggGAA
ATTTTTGACATATCTTTAGTAGAAGATTAGAAAGACGggcttttttttgt
ttaaatcaGATTAAAATACACAATGTGGGTGATTATGTAGACCCTGTTTT
CATAGAGATTAAAGAAACGTTGTATTTGACCCTGTTTTCTGTAtatgtca
aaaatatatttttgttctGTACTTTTTTTGTCCCGTGTTATTGTCCATAT
TTGATTGTCAGAAATTTCCCATGAGCTCCTCATTTTAATCagtttcaatt
aaaaaaagaaattcaaacctCATCAGAATTTGCTGATATAGCAAATAAAA
AATGGTAGCcaatatgaaataaaaatccTATAGAACAGTCAACTAAAAGT
TGTATTGGTCGATTTTTATGTCTGACATCGAAATCAAACTTATAGCTTAC
TCAATGATAACCGTTAAAATGAAGGCCTTGGGTTTTCCCCTCAACGGTAT
TTAAACCTTTTATTTTTCAGGAGGGTAAATAAAGTCTTCCAAAAAATGAC
ATTCCGTACTTTTTGAGGGGTAAAAGAAATACCTCGTTGTAAAGGTAATT
TTGAGTGGCTTGATGTAATAGAATTGGCACCACGTTGTCACCGCAAGTAA
ACTTCAATCCTTTTAATTCTCCTCTTATTATTTAGTGTGGTTTCAAATTG
TTCACACGAAAAGCTGCACTGACATTATTCTCAAGCTTGCATGTGGAACG
CTGGTAAGTCCAGCTTTCTTCTTTATTCTAACATCTGACCCTTCCCTAGT
CTTGATGAAGATTTTTCTTCGTTCAAAGCTCCAGATCAGGTATGGCTTCT
TCTATTGACATTTattctaaaaagaaaagaattcgTGTAATGCTTTGCTA
GTTGCTACCTTTGAAAGTAAGTTTTCAATCTATATTCTTAAAGAGACATC
ATGATTAGTAGTGTTCGGTGTACAGTATATCAATTATCAAATCATCAGAT
AAAAAAGTTTACTTTGTAATTCTGACGAAACTAGAAATTGACACTCTTAC
ATAGACCTTGCATTGGTTTATGCGGGAGGTCAATTATTTCGCTACTTAAC
TTAAACGTTAAAAGTTCTTTCTTCGAAACTGAATTTACACAAATTAATGT
TCATaccgtttttattttttcacttctcTATTGCAAGGAAGCAATTCAAG
AAGTTCATttcatattttgagttttgagagatgaaaaattaatgttttca
aaaattaacgaCTATTGGAGCCAACCAGTTTGGCGCTGTAGttgtagaaa
agaaaaacaaaattttaaaaatgaaaatcactTGTATTAAGTGCTGATAA
CACTGGCAACCCACTAACTTTATAAGGAAGAATCATTCCTAATAACTTca
cagaaaaagtgttttgatttACACTTTAGAAGAAGAATTTTGTTCTGACG
TACCCATAAaacagtcggaggcgacccgaaggcttctctttcgatagcta
tctatccGAAGGTATAGAAgagcgccactctttctccctggattactcca
cttacccttgatccttctcttaattgttGAGTATCAGAGTATCAGCAGAG
AGGCAGCAAGTACCATTTTCGGAATCTTTGTTATGACTTACAACCTTGcc
caccgtagccggatgctctaccactgaacTAAGGTCGcttagaaaaaata
taaaacctaCCTTAAAAACATAAGCGGAACAAATTCAAAAACCAATCTTG
TCTAATATTATtgcaaaagtaaaaataattttattttgttttttgaaaag
aaagctGGTACTACTGTAGAGGATCGAGGAAAATAAAATCAAGAaggttg
tttttgtttttttctcaacgcttgaaaatatttttgaagtgaATGTGGAC
CGACACACCTTGTGGAATACTGGCAcataaactttttataaaatcaatat
CAACATAAAAAGAGAGATAAATAGAAATGGTTTCTTTCTAGCCTTCTGGT
GTCCAGTAACTTAGCCTGGACCCAATTCTTGAATCTGAATTTGAAGTAAA
AATCAATCGATTTCGATTGGTGCATCCAAAATTGTTACATAAAAATACTT
AAGTTacataaatattttgataaattttactcTTATGCTCTCGAACCTAT
ATAgctgtttttttcttcaaaattcctAATTTTAGGTGTGAAGGAGGAAA
AATAAGATACGAATTTTTGGAAACCTTCGTTTTATTTTCCCCCAAAAAAT
TTGTGTCGGCGAAACACGAATTATAAACTTCTGGCGAAATCACAGAAAGG
CGTCATGTATTTTatgcttgaaaattttttctttacaatCAACTAATATT
ACTTGGCTATTCGCAGCCTAACGAGAATCTTCAACCCACTATTGATCCTC
GTGATCGAAGTATAGACataattgggctattccagaaatactatgtaccc
cctatgttgaggagttgtgacgtccagggtgacCTTGGAAATATAAAATC
CAGGGGTCTGGTTTTTGTAGTGTAAAAATGAGAAGCtaccaaaaaatgaa
aacaataatcCAAGTTGGTCCtgaaaaatcgagaaaaaaaataaatgggA
GTCACCTTTCCCAGGCCTCTTTTGACGCTCCTTAAAATTCGACGCTCTTC
TATTAGATatgttctattattcgataatattgaaagtcaccatcaacaag
aaactctcataaacgacgctctactattggTCCCTTaattgatgaaaatc
caattccctttgaaaatataattatggatCGTCCACTTGCTTATGATTTT
CTATTGATTTGGTAGTTTATAACTTCTTTTATTCTAAAAGGCTTTTACGG
ACCTATTCTGTTTCATAAAAAAGACTAGCAGAGAACGTCAAAGTCTCCTT
ATCATCATCGTTCTGACGTCAGTGACGTTAAATTGACATACGAGCCGCAC
GTCGGGCAACACGAGTTCCGTTCTAAAAGCGGACTATTCGATctagaatt
taaaaattgatcaGCTGGAATCAGTGAGCTCTCAGCATCAAGCATCAAAC
TGTCATGGCTGTTCGTTTCTTTTGGGTAAACCCCTTTCTTAAGATTGTAA
TCAACCACTGATTTAGAGATTGACGCATACAACTCTTTAATGTTATGCGA
TGAATTGCCTCCACCACCGCTTGAAGAATCTTGTGTGATCCTATAGAAAA
ACAACAGTTTTCTTTTCACCTTTTTGTTCACACGGTTCACTAAATATTGA
GTCGGTTGGAACGAACATGGACCCACTCCAGCTAAGATGATGATAACTGG
CTCGTCACTCAAGTCTGATAAATATTTCTCAAATTCACTTTCATCGTTAC
TGACCCCGTCTGTTACGATCAACATCACATAAAATACATCACTCGAACTT
TCTCGAACCTCTCCAATTTCAACCAAGTTGGATTTATCATAAAGTTTCGA
CATAATCTGTTTAAAGTATGTTGGACCACCTGGTTCTACCATGGGGATAA
TATCTTTATAGCTTAGAATAATGGCGTCTAGATCCGcattatttttattg
atttcaaaacaatagTCGTCAATTTCACCCTTTGTTAAAATGTTGTcgtt
attgttgttgttgttaccCACGAGTTGAAATTCGTTATTACCATCTATCG
CCTTTAGATTATTTAATGTGCTTTCTATGAAGCATTGACTTGATCTGTTA
TTGGGTTGACTTTCCAATACTTTCGAATATAATTTCCCACCGAACCCATA
CAAAGGGATTCGCTTGCAATAATATGATAACCATGTTCCTACTTGCTTCA
GAGCGGTGATGTAATCAttgctaccattttgtttttgaagatgaTGTAAC
GAACGCTCATTGGTCAATGGGCAACCGTTGGAGAGAGTGAAATCGATGCC
GATGctacatttgatttgagttcCACTGCGAATGTAATCGACCAATGAGA
ATTGTTCATCCACTGACACGTGATACAGTTTCAAATAGCCTGCATTCGAT
TCCTTGTTTTTAGCACGGCCTAACGAACGTTTTGAGCTTGACATTCTACG
CAAGTTGATCTCCTTTACCAGTCCCTTATAGCTTTGCAATTGGTGTAATG
TTGTCACAAGCTGACCTTTAATCTCTGGTTCACCTTTTGCGTTGTGTGCT
AAAATTTGAAAGAGTAAATTTCCATCCCTGTCTCCATTACAAAGCTTCTG
TATGTTAATACTGAATAGTTTCCAACGCGGATAGTTTGCTTTGAAAATGA
CTTCACTCCGATAGACAGGATGGTAGGTATCCTCGAAAATCTCTCGATTA
ATTTGAAGAAATACACTTGCTCGATTAAAGAAATGTTTCTTGGCCAGTTT
ACCAGCACCTAGACTTAAGCGTActtcttttttgctttcaattGAGTTCC
GAACCGGTATAGCACACATTGACAGTGTCCCAGTCTTCTTACCGCTTTCA
tgtttaaaatgaaaatctttgaaatctaGGTCACCTCGAAGTAAATTCTC
AACCTCTAAATCATCTGTTGTACCTAGAAGTTTACATTTTTGTAAATCTC
TAGAACTCAAATTATCACCATCATACAAAGACGCCTTTAAACGTCTATTG
TCCGTATTGTTTGTATCGACATAAAAGGTTTCAGTGAACAAGGGTCTGTG
ACAATTCGCTATAGTTTCCGTTCTGCCGTACTCAAACCATTTCCCGTAAC
GGCGGACGTGTAGTACGACAAATGGATCAGTTTTGCTGAACATATCAACA
GATATGATGTCACGGCACTTGATAAATAACTCGATGTACATTTTATCGCT
CTTACTCGCCTCTTTGGCGATGTTTTCAACGCGCGTTTTCGTTGGTGATT
TTGGCAGGTAGATTGTTGGTGACTGTGGAAGACTCGTTGTTGAAGCAATC
ATTAAGTCTGGCATCACTTGtgatcttttctttttgaacaTTGTTCAAAT
TTATTCTGAAAATTCGATTATATGTTAAAGTCACTCTTCTTCANNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGT
ACGGCAGTCGctgtacctgccgtacccgtcgCGTCGTGCCTACGCTTGGT
GAATTATTTCCAGTCATGTGCAAATAGAAAATTTCTATCATACTAGGAAG
TTAAGTTGGGTCTGTGACAACGATTTCTCCATAAATTTATTCgtgacttt
tttctttgtttcagagATCCTTCTTCAGGAACATTTTGATGTTTGGGTTT
CATTTCTTAGTTTCATTTCTTTGCGTCAAAGATATAAAAGACACACAGGt
aatcaattcatgatattcatgacgtaatgttttctacggaaataccccgg
ttttagccagttgTGATAAATTTagactagacaaaagttgtataaaattt
accACTACTGGCAAAGACCGGGGTCTTTTTCCGTAGAGAACATTACATCA
TGAACATCATGAATTAGCTTCATAATAAATATAACAGGGTTTTTATGGAT
CCTGAAAATGTTTGGAGATGAATCTTCAAACccttgaaaactttgaaacc
tAAAACTTTTCAAGAGAAAgctttgaaaaggttggttAATTTCATGTATT
CGAATAAACTAATAATCCACAAACAAGTGGTAAGTAAAACCTTGAATACC
ATGAAATAAGATTTAAGACAAAGTTCATAGACAAAACAGACTGTATACAT
ATTGTTTTCGATTCAATCCGATATTTGTTTCCATAAAAAGTTTCAATACT
TTCAATTCACTACGGcaaagtcaagaaaaatttacaaaaaaatacgaatt
taaatcgactttctcaattttcctttattttgtATGAAATTAAAAACAGA
AGATAAGTTTTATCCTTGAAGTAATCTCTTAAACGTGAGGTTTTCTTGGA
ATTTggttattttaattttatttatcaCTACGCTTCATTCAGACTAagaa
aaatcgctaaaaagggGAAATTTTTGACATATCTTTAGTCGAAGATTAGA
AAAACGggcttttttttgtttaaatcaGATTAAAATACACAATGTGGGTG
ATTATGTAGACCCTGTTTTCATAGAGATTAAAGAAACGTTGTATTTGACC
CTGTTTTCTGTatatctcaaaaatatatttttgctcTGTACTTTTTTTGT
CCCGTGTTATTGTCCATATTTGACTGTCAGAAATTTCCCATGAGCTCCTC
ATTTTAATCagtttcaatttaaaaaaagaaattcaaacctCATCAGAATT
TGCTGATATAGCAAATAAAAAATGGTAGCcaatatgaaataaaaatccTA
TAGAACAGTCAACTAAAAGTTGTATTGGTCGATTTTTATGTCTGACATCG
AAATCAAACTTATAGCTTACTCAATGATAACCGTTAAAATGAAGGCCTTG
GGTTTTCCCCTCAACGGTATTTAAACCTTTTATTTTTCAGGAGGGTAAAT
AAAGTCTTCCAAAAAATGACATTCCGTACTTTTTGAGGGGTAAAAGAAAT
ACCTCGTTGTAAAGGTAATTTTGAGTGGCTTGATGTAATAGAATTGGCAC
CACGTTGTCACCGCAAGTAAACTTCAATCCTTTTAATTCTCCTCTTATTA
TTTAGTGTGGTTTCAAATTGTTCACACGAAAAGCTGCACTGACATTATTC
TCAAGCTTGCATGTGGAACGCTGGTAAGTCCAGCTTTCTTCTTTATTCTA
ACATCTGACCCTTCCCTAGTCTTGATGAAGATTTTTCTTCGTTCAAAGCT
CCAGATCAGGTATGGCTTCTTCTATTGACATTTattctaaaaagaaaaga
attcgTGTAATGCTTTGCTAGTTGCTACCTTTGAAAGTAAGTTTTCAATC
TATATTCTTAAAGAGACATCATGATTAGTAGTGTTCGGTGTACAGTATAT
CAATTATCAAATCATCAGATAAAAAAGTTTACTTTGTAATTCTGACGAAA
CTAGAAATTGACACTCTTACATAGACCTTGCATTGGTTTATGCGGGAGGT
CAATTATTTCGCTACTTAACTTAAACGTTAAAAGTTCTTTCTTCGAAACT
GAATTTACACAAATTAATGTTCATaccgtttttattttttcacttctcTA
TTGCAAGGAAGCAATTCAAGAAGTTCATttcatattttgagttttgagag
attcaaaaaattaacgacTATTGGAGCCAACCAGTTTGGCGCTGTAGttg
tagaaaagaaaaacaaaattttaaaaatgaaaatcactTGTATTAAGTGC
TGATAACACTGGCAACCCACTAACTTTATAAGGAAGAATCATTCCTAATA
ACTTcacagaaaaagtgttttgatttACACTTTAGAAGAAGAATTTTGTT
CTGACGTACCCATAAaacagtcggaggcgacccgaaggcttctctttcga
tagctatctatccGAAGGTATAGAAgagcgccactctttctccctggatt
actccacttacccttgatccttctcttaattgttGAGTATCAGAGTATCA
GCAGAGAGGCAGCAAGTACCATTTTCGGAATCTTTGTTATGACTTACAAC
CTTGcccaccgtagccggatgctctaccactgaacTAAGGTCGcttagaa
aaaatataaaacctaCCTTAAAAACATAAGCGGAACAAATTCAAAAACCA
ATCTTGTCTAATATTATtgcaaaagtaaaaataattttattttgtttttt
gaaaagaaagctGGTACTACTGTAGAGGATCGAGGAAAATAAAATCAAGA
aggttgtttttgtttttttctcaacgcttgaaaatatttttgaagtgaAT
GTGGACCGACACACCTTGTGGAATACTGGCAcataaactttttataaaat
caatatCAACATAAAAAGAGAGATAAATAGAAATGGTTTCTTTCTAGCCT
TCTGGTGTCCAGTAACTTAGCCTGGACCCAATTCTTGAATCTGAATTTGA
AGTAAAAATCAATCGATTTCGATTGGTGCATCCAAAATTGTTACATAAAA
ATACTTAAGTTacataaatattttgataaattttactcTTATGCTCTCGA
ACCTATATAgctgtttttttcttcaaaattcctAATTTTAGGTGTGAAGG
AGGAAAAATAAGATACGAATTTTTGGAAACCTTCGTTTTATTTTCCCCCA
AAAAATTTGTGTCGGCGAAACACGAATTATAAACTTCTGGCGAAATCACA
GAAAGGCGTCATGTATTTTatgcttgaaaattttttctttacaatCAACT
AATATTACTTGGCTATTCGCAGCCTAACGAGAATCTTCAACCCACTATTG
ATCCTCGTGATCGAAGTATAGACataattgggctattccagaaatactat
gtaccccctatgttgaggagttgtgacgtccagggtgacCTTGGAAATAT
AAAATCCAGGGGTCTGGTTTTTGTTGTGTAAAAATGAGaagctctcaaaa
aatgaaaacaataatcCAAGTTGGTCCtgaaaaatcgagaaaaaaaataa
atgggAGTCACCTTTCCCAGGCCTCTTTTGACGCTCCTTAAAATTCGACG
CTCTTCTATTAGATatgttctattattcgataatattgaaagtcaccatc
aacaagaaactctcataaacgacgctctactattggTCCCTTaattgatg
aaaatccaattccctttgaaaatataattatggatCGTCCACTTGCTTAT
GATTTTCTATTGATTTGGTAGTTTATAACTTCTTTTATTCTAAAAGGCTT
TTACGGACCTATTCTGTTTCATAAAAAAGACTAGCAGAGAACGTCAAAGT
CTCCTTATCATCATCGTTCTGACGTCAGTGACGTTAAATTGACATACGAG
CCGCACGTCGGGCAACACGAGTTCCGTTCTAAAAGCGGACTATTCGATct
agaatttaaaaattgatcaGCTGGAATCAGTGAGCTCTCAGCATCAAGCA
TCAAACTGTCATGGCTGTTCGTTTCTTTTGGGTAAACCCCTTTCTTAAGA
TTGTAATCAACCACTGATTTAGAGATTGACGCATACAACTCTTTAATGTT
ATGCGATGAATTGCCTCCACCACCGCTTGAAGAATCTTGTGTGATCCTAT
AGAAAAACAACAGTTTTCTTTTCACCTTTTTGTTCACACGGTTCACTAAA
TATTGAGTCGGTTGGAACGAACATGGGCCCACTCCAGCTAAGATGATGAT
AACTGGCTCGTCACTCAAGTCTGATAAATATTTCTCAAATTCACTTTCAT
CGTTACTGACCCCGTCTGTTACGATCAACATCACATAAAATACATCACTC
GAACTTTCTCGAACCTCTCCAATTTCAACCAAGTTGGATTTATCATAAAG
TTTCGACATAATCTGTTTAAAGTATGTTGGACCACCTGGTTCTACCATGG
GGATAATATCTTTATAGCTTAGAATAATGGCGTCTAGATCCgcattgttt
ttattgatttcaaaacaatagTCGTCAATTTCACCCTTTGTTAAAATGTT
GTcgttattgttgttgttgttaccCACGAGTTGAAATTCGTTATTACCAT
CTATCGCCTTTAGATTATTTAATGTGCTTTCTATGAAGCATTGACTTGAT
CTGTTATTGGGTTGACTTTCCAATACTTTCGAATATAATTTCCCACCGAA
CCCATACAAAGGGATTCGCTTGCAATAATATGATAACCATGTTCCTACTT
GCTTCAGAGCGGTGATGTAATCAttgctaccattttgtttttgaagatga
TGTAACGAACGCTCATTGGTCAATGGGCAACCGTTGGAGAGAGTGAAATC
GATGCCGATGctacatttgatttgagttcCACTGCGAATGTAATCGACCA
ATGAGAATTGTTCATCCACTGACACGTGATACAGTTTCAAATAGCCTGCA
TTCGATTCCTTGTTTTTAGCACGGCCTAACGAACGTTTTGAGCTTGACAT
TCTACGCAAGTTGATCTCCTTTACCAGTCCCTTATAGCTTTGCAATTGGT
GTAATGTTGTCACAAGCTGACCTTTAATCTCTGGTTCACCTTTTGCGTTG
TGTGCTAAAATTTGAAAGAGTAAATTTCCATCCCTGTCTCCATTACAAAG
CTTCTGTATGTTAATACTGAATAGTTTCCAACGCGGATAGTTTGCTTTGA
AAATGACTTCACTCCGATAGACAGGATGGTAGGTATCCTCGAAAATCTCT
CGATTAATTTGAAGAAATACACTTGCTCGATTAAAGAAATGTTTCTTGGC
CAGTTTACCAGCACCTAGACTTAAGCGTActtcttttttgctttcaattG
AGTTCCGAACCGGTATAGCACACATTGACAGTGTCCCAGTCTTCTTACCG
CTTTCAtgtttaaaatgaaaatctttgaaatctaGGTCACCTCGAAGTAA
ATTCTCAACCTCTAAATCATCTGTTGTACCTAGAAGTTTACATTTTTGTA
AATCTCTAGAACTCAAATTATCACCATCATACAAAGACGCCTTTAAACGT
CTATTGTCCGTATTGTTTGTATCGACATAAAAGGTTTCAGTGAACAAGGG
TCTGTGACAATTCGCTATAGTTTCCGTTCTGCCGTACTCAAACCATTTCC
CGTAACGGCGGACGTGTAGTACGACAAATGGATCAGTTTTGCTGAACATA
TCAACAGATATGATGTCACGGCACTTGATAAATAACTCGATGTACATTTT
ATCGCTCTTACTCGCCTCTTTGGCGATGTTTTCAACGCGCGTTTTCGTTG
GTGATTTTGGCAGGTAGATTGTTGGTGACTGTGGAAGACTCGTTGTTGAA
GCAATCATTAAGTCTGGCATCACTTGtgatcttttctttttgaacaTTGT
TCAAATTTATTCTGAAAATTCGATTATATGTTAAAGTCACTCTTCTTCAN
AATCGACCAATGAGAATTGTTCATCCACTGACACGTGATACAGTTTCAAA
TAGCCTGCATTCGATTCCTTGTTTTTAGCACGGCCTAACGAACGTTTTGA
GCTTGACATTCTACGCAAGTTGATCTCCTTTACCAGTCCCTTATAGCTTT
GCAATTGGTGTAATGTTGTCACAAGCTGACCTTTAATCTCTGGTTCACCT
TTTGCGTTGTGTGCTAAAATTTGAAAGAGTAAATTTCCATCCCTGTCTCC
ATTACAAAGCTTCTGTATGTTAATACTGAATAGTTTCCAACGCGGATAGT
TTGCTTTGAAAATGACTTCACTCCGATAGACAGGATGGTAGGTATCCTCG
AAAATCTCTCGATTAATTTGAAGAAATACACTTGCTCGATTAAAGAAATG
TTTCTTGGCCAGTTTACCAGCACCTAGACTTAAGCGTActtcttttttgc
tttcaattGAGTTCCGAACCGGTATAGCACACATTGACAGTGTCCCAGTC
TTCTTACCGCTTTCAtgtttaaaatgaaaatctttgaaatctaGGTCACC
TCGAAGTAAATTCTCAACCTCTAAATCATCTGTTGTACCTAGAAGTTTAC
ATTTTTGTAAATCTCTAGAACTCAAATTATCACCATCATACAAAGACGCC
TTTAAACGTCTATTGTCCGTATTGTTTGTATCGACATAAAAGGTTTCAGT
GAACAAGGGTCTGTGACAATTCGCTATAGTTTCTGTTCTGCCGTACTCAA
ACCATTTCCCGTAACGGCGGACGTGTAGTACGACAAATGGATCAGTTTTG
CTGAACATATCAACAGATATGATGTCACGGCACTTGATAAATAACTCGAT
GTACATTTTATCGCTCTTACTCGCCTCTTTGGCGATGTTTTCAACGCGCG
TTTTCGTTGGTGATTTTGGCAGGTAGATTGTTGGTGACTGTGGAAGACTC
GTTGTTGAAGCAATCATTAAGTCTGGCATCACTTGtgatcttttcttttt
gaacaTTGTTCAAATTTATTCTGAAAATTCGATTATATGTTAAAGTCACT
CTTCTTCATATTCAAAATGTATCTCTAGTAAAAACAGGTTTCTACATAAA
CGAACCAGTTAGTTATGAAGGTTCTTCTTTCAAATGTGcgaattcttttc
aatactACACAGTAGTGCTCGTTTCTTTTTTTCCAACCGTTTCATTAATT
GCTCGTGAACGTCTGGTACCAAAACTTTCATGTACATTTTGATGAAAGCT
CTATTGtaaagaaaagtaaaagaataaGTTAATTATGACAGTTTTCTCAA
AATTGTTTTCATCGCGTTACCATAGTAACTACAATTATTATTATGGTACa
agatttttcacaaaatgtaATAATTTCTAATGTCATTATTTGATAATTTG
CACCAGGGAATTTACATAATAATGTGAATTTTCTTTGTGTTATTCCTCTT
TGAAGTTTCGAAATCGTTATATTACTTGCAAATTTTCGAGGGCCGCCCCT
TTCAAAAGATATATGGGAtgtttaaggctttttcttgaAAGGGTACTGCT
GGACTCAAGGGGCTTCTTGTGCATAGTTTTACCAAGGCCCTAATGGACCT
TGTATGTAAACCGACCCGATATCTactaaaatttcgaaatttattgCCGT
AAGGGCAATATTATACGTGAAATACACACTGCTGTATGGACCTTATAATG
CAAACCCTGCAAAGATATAGAATTTCAATGCAGAATTTGATATGCTTAAT
tagaaaagtaagaaaaatctaGCTTTTCACCTAGTTTTCCAAGTACCAAG
TTTTCTATCTATCCGCCTATACTACACCCACTTTTGCATTTTAATGTCAT
CCTATAAGACTAGACAGTCATGGTTTCAATAAAAGAGGAGGAATACGCAA
GGACTCATTGGGAGCGTCCATATTCTACATCAAATGTTTCAGTTTATATT
GTATATTGTAAAAGGATCTGGTTAATAGCGGTTGTttaaaaggatatttt
ttcAGAAAGGAGCCACGAATTATGCcaggcaaaagtttttatgaccaaaa
aacTGAAGTTCAGGCAAAACCCCTCAGCCCCCAAAATATGTAAGGGTTGG
CCCCTTACTATATAAGGGGAATTTGAAAATGGTCGTCAGAACTTTACATA
TTCTCCTCTTGTATCAATTTTATCAGGGCATTTGATGTCGAACTTCTGTA
CATAGCGCAAAGACTAGGAATACCAATCGAAGAAAAAGCTGTCAATTGGC
AAGAAATTGATGGTAAGAAACCTTTTACGGCATATTTGGTTAGATTTATC
AGGTCTTATCCctgtttactttatttttttcatatagaGTTTCATGGAGT
TTCGATCGGATGATTCTATCCACAAGAAACTACATCATTCGTTTTTTTAC
TACTCAGTTTCCCTTATGATTTTTCTAATTGGGTATTTAATGCCTCATAT
GACCAACTAATCCATTGTTACTAtcataatcttttttttcattcacgATT
TTTAGGTTCCAAGATGGTACCTATTTTTAGTTGGATTCAAATGGGCAAAG
ATTTGTTATTGATCCGAGCACGTTATGTGATAGGGGCATGGGCACTACAG
CCATCTGGTCAACCCAATTTAGTTGATGTTGATGAGGATTAGGATCTATT
TATATTTTTCCCAA

Coding sequence (CDS) from alignment at scaffold_379:3163..31926+

>TCONS_00063055 ID=TCONS_00063055|Name=TCONS_00063055|organism=Clytia hemisphaerica|type=CDS|length=3096bp|location=Sequence derived from alignment at scaffold_379:3163..31926+ (Clytia hemisphaerica)
atggtGGATGCAGATGGTGCTACCAAATTCTCTGATCTTCAACATGTAGA
CAAAGCCTTAGATGAGTTGAAAGGAGGTAAAAATGGGATGGCATTTTGTG
TTGGATCGAGAGCACATCTTCAGGATGATGCAGTTGCACAGagATCCTTC
TTCAGGAACATTTTGATGTTTGGGTTTCATTTCTTAGTTTCATTTCTTTG
CGTCAAAGATATAAAAGACACACAGTGTGGTTTCAAATTGTTCACACGAA
AAGCTGCACTGACATTATTCTCAAGCTTGCATGTGGAACGCTGGGCATTT
GATGTCGAACTTCTGTACATAGCGCAAAGACTAGGAATACCAATCGAAGA
AAAAGCTGTCAATTGGCAAGAAATTGATGGTTCCAAGATGGTACCTATTT
TTAGTTGGATTCAAATGGGCAAAGATTTGTTATTGATCCGAGCACGTTAT
GTGATAGGGGCATGGGCACTACAGCCATCTGGTCAACCCAATTTAGTTGA
TGTTGATGAGGATTAGatggtGGATGCAGATGGTGCTACCAAATTCTCTG
ATCTTCAACATGTAGACAAAGCCTTAGATGAGTTGAAAGGAGGTAAAAAT
GGGATGGCATTTTGTGTTGGATCGAGAGCACATCTTCAGGATGATGCAGT
TGCACAGagATCCTTCTTCAGGAACATTTTGATGTTTGGGTTTCATTTCT
TAGTTTCATTTCTTTGCGTCAAAGATATAAAAGACACACAGTGTGGTTTC
AAATTGTTCACACGAAAAGCTGCACTGACATTATTCTCAAGCTTGCATGT
GGAACGCTGGGCATTTGATGTCGAACTTCTGTACATAGCGCAAAGACTAG
GAATACCAATCGAAGAAAAAGCTGTCAATTGGCAAGAAATTGATGGTTCC
AAGATGGTACCTATTTTTAGTTGGATTCAAATGGGCAAAGATTTGTTATT
GATCCGAGCACGTTATGTGATAGGGGCATGGGCACTACAGCCATCTGGTC
AACCCAATTTAGTTGATGTTGATGAGGATTAGatggtGGATGCAGATGGT
GCTACCAAATTCTCTGATCTTCAACATGTAGACAAAGCCTTAGATGAGTT
GAAAGGAGGTAAAAATGGGATGGCATTTTGTGTTGGATCGAGAGCACATC
TTCAGGATGATGCAGTTGCACAGagATCCTTCTTCAGGAACATTTTGATG
TTTGGGTTTCATTTCTTAGTTTCATTTCTTTGCGTCAAAGATATAAAAGA
CACACAGTGTGGTTTCAAATTGTTCACACGAAAAGCTGCACTGACATTAT
TCTCAAGCTTGCATGTGGAACGCTGGGCATTTGATGTCGAACTTCTGTAC
ATAGCGCAAAGACTAGGAATACCAATCGAAGAAAAAGCTGTCAATTGGCA
AGAAATTGATGGTTCCAAGATGGTACCTATTTTTAGTTGGATTCAAATGG
GCAAAGATTTGTTATTGATCCGAGCACGTTATGTGATAGGGGCATGGGCA
CTACAGCCATCTGGTCAACCCAATTTAGTTGATGTTGATGAGGATTAGat
ggtGGATGCAGATGGTGCTACCAAATTCTCTGATCTTCAACATGTAGACA
AAGCCTTAGATGAGTTGAAAGGAGGTAAAAATGGGATGGCATTTTGTGTT
GGATCGAGAGCACATCTTCAGGATGATGCAGTTGCACAGagATCCTTCTT
CAGGAACATTTTGATGTTTGGGTTTCATTTCTTAGTTTCATTTCTTTGCG
TCAAAGATATAAAAGACACACAGTGTGGTTTCAAATTGTTCACACGAAAA
GCTGCACTGACATTATTCTCAAGCTTGCATGTGGAACGCTGGGCATTTGA
TGTCGAACTTCTGTACATAGCGCAAAGACTAGGAATACCAATCGAAGAAA
AAGCTGTCAATTGGCAAGAAATTGATGGTTCCAAGATGGTACCTATTTTT
AGTTGGATTCAAATGGGCAAAGATTTGTTATTGATCCGAGCACGTTATGT
GATAGGGGCATGGGCACTACAGCCATCTGGTCAACCCAATTTAGTTGATG
TTGATGAGGATTAGatggtGGATGCAGATGGTGCTACCAAATTCTCTGAT
CTTCAACATGTAGACAAAGCCTTAGATGAGTTGAAAGGAGGTAAAAATGG
GATGGCATTTTGTGTTGGATCGAGAGCACATCTTCAGGATGATGCAGTTG
CACAGagATCCTTCTTCAGGAACATTTTGATGTTTGGGTTTCATTTCTTA
GTTTCATTTCTTTGCGTCAAAGATATAAAAGACACACAGTGTGGTTTCAA
ATTGTTCACACGAAAAGCTGCACTGACATTATTCTCAAGCTTGCATGTGG
AACGCTGGGCATTTGATGTCGAACTTCTGTACATAGCGCAAAGACTAGGA
ATACCAATCGAAGAAAAAGCTGTCAATTGGCAAGAAATTGATGGTTCCAA
GATGGTACCTATTTTTAGTTGGATTCAAATGGGCAAAGATTTGTTATTGA
TCCGAGCACGTTATGTGATAGGGGCATGGGCACTACAGCCATCTGGTCAA
CCCAATTTAGTTGATGTTGATGAGGATTAGatggtGGATGCAGATGGTGC
TACCAAATTCTCTGATCTTCAACATGTAGACAAAGCCTTAGATGAGTTGA
AAGGAGGTAAAAATGGGATGGCATTTTGTGTTGGATCGAGAGCACATCTT
CAGGATGATGCAGTTGCACAGagATCCTTCTTCAGGAACATTTTGATGTT
TGGGTTTCATTTCTTAGTTTCATTTCTTTGCGTCAAAGATATAAAAGACA
CACAGTGTGGTTTCAAATTGTTCACACGAAAAGCTGCACTGACATTATTC
TCAAGCTTGCATGTGGAACGCTGGGCATTTGATGTCGAACTTCTGTACAT
AGCGCAAAGACTAGGAATACCAATCGAAGAAAAAGCTGTCAATTGGCAAG
AAATTGATGGTTCCAAGATGGTACCTATTTTTAGTTGGATTCAAATGGGC
AAAGATTTGTTATTGATCCGAGCACGTTATGTGATAGGGGCATGGGCACT
ACAGCCATCTGGTCAACCCAATTTAGTTGATGTTGATGAGGATTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_039498XLOC_039498Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00063055-proteinTCONS_00063055-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00063055-exon-scaffold_379-1491911889:3163..3362TCONS_00063055-exon-scaffold_379-1491911889:3163..3362Clytia hemisphaericaexon
TCONS_00063055-exon-scaffold_379-1510915933:3163..3362TCONS_00063055-exon-scaffold_379-1510915933:3163..3362Clytia hemisphaericaexon
TCONS_00063055-exon-scaffold_379-1575043694:3163..3362TCONS_00063055-exon-scaffold_379-1575043694:3163..3362Clytia hemisphaericaexon
TCONS_00063055-exon-scaffold_379-1491911889:5314..5331TCONS_00063055-exon-scaffold_379-1491911889:5314..5331Clytia hemisphaericaexon
TCONS_00063055-exon-scaffold_379-1510915933:5314..5331TCONS_00063055-exon-scaffold_379-1510915933:5314..5331Clytia hemisphaericaexon
TCONS_00063055-exon-scaffold_379-1575043694:5314..5331TCONS_00063055-exon-scaffold_379-1575043694:5314..5331Clytia hemisphaericaexon
TCONS_00063055-exon-scaffold_379-1491911889:23595..23660TCONS_00063055-exon-scaffold_379-1491911889:23595..23660Clytia hemisphaericaexon
TCONS_00063055-exon-scaffold_379-1510915933:23595..23660TCONS_00063055-exon-scaffold_379-1510915933:23595..23660Clytia hemisphaericaexon
TCONS_00063055-exon-scaffold_379-1575043694:23595..23660TCONS_00063055-exon-scaffold_379-1575043694:23595..23660Clytia hemisphaericaexon
TCONS_00063055-exon-scaffold_379-1491911889:24968..25035TCONS_00063055-exon-scaffold_379-1491911889:24968..25035Clytia hemisphaericaexon
TCONS_00063055-exon-scaffold_379-1510915933:24968..25035TCONS_00063055-exon-scaffold_379-1510915933:24968..25035Clytia hemisphaericaexon
TCONS_00063055-exon-scaffold_379-1575043694:24968..25035TCONS_00063055-exon-scaffold_379-1575043694:24968..25035Clytia hemisphaericaexon
TCONS_00063055-exon-scaffold_379-1491911889:31439..31524TCONS_00063055-exon-scaffold_379-1491911889:31439..31524Clytia hemisphaericaexon
TCONS_00063055-exon-scaffold_379-1510915933:31439..31524TCONS_00063055-exon-scaffold_379-1510915933:31439..31524Clytia hemisphaericaexon
TCONS_00063055-exon-scaffold_379-1575043694:31439..31524TCONS_00063055-exon-scaffold_379-1575043694:31439..31524Clytia hemisphaericaexon
TCONS_00063055-exon-scaffold_379-1491911889:31768..31926TCONS_00063055-exon-scaffold_379-1491911889:31768..31926Clytia hemisphaericaexon
TCONS_00063055-exon-scaffold_379-1510915933:31768..31926TCONS_00063055-exon-scaffold_379-1510915933:31768..31926Clytia hemisphaericaexon
TCONS_00063055-exon-scaffold_379-1575043694:31768..31926TCONS_00063055-exon-scaffold_379-1575043694:31768..31926Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_379supercontigscaffold_379:3163..31926 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
146.21	153.411	62.4843	53.9668	57.9069	41.5499	71.1327	76.6587	83.9222	92.308	51.0649	52.0861	40.9217	36.2956	48.9579	56.1484	86.8486	75.3011	26.8991	53.114	49.3598	47.2762	87.8759	77.3982	40.1302	42.7155	60.7629	40.7994	86.1431	69.7417
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR029044Nucleotide-diphossugar_trans
Blast
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BLAST of TCONS_00063055 vs. Swiss-Prot (Human)
Match: ALG5 (Dolichyl-phosphate beta-glucosyltransferase OS=Homo sapiens GN=ALG5 PE=1 SV=1)

HSP 1 Score: 250.366 bits (638), Expect = 4.965e-82
Identity = 116/175 (66.29%), Postives = 142/175 (81.14%), Query Frame = 3 
Query:   27 GVFCSRGQKILMVDADGATKFSDLQHVDKALDELKGGKNGMAFCVGSRAHLQDDAVAQRSFFRNILMFGFHFLVSFLCVKDIKDTQCGFKLFTRKAALTLFSSLHVERWAFDVELLYIAQRLGIPIEEKAVNWQEIDGSKMVPIFSWIQMGKDLLLIRARYVIGAWALQPSGQPN 551
            G+F SRG+KILM DADGATKF D++ ++K L++L+   N MA   GSRAHL+ +++AQRS+FR +LM+GFHFLV FLCVK I+DTQCGFKLFTR+AA   FSSLHVERWAFDVELLYIAQ   IPI E AVNW EI+GSK+VP +SW+QMGKDLL IR RY+ GAW L+ + + N
Sbjct:  150 GIFSSRGEKILMADADGATKFPDVEKLEKGLNDLQPWPNQMAIACGSRAHLEKESIAQRSYFRTLLMYGFHFLVWFLCVKGIRDTQCGFKLFTREAASRTFSSLHVERWAFDVELLYIAQFFKIPIAEIAVNWTEIEGSKLVPFWSWLQMGKDLLFIRLRYLTGAWRLEQTRKMN 324
The following BLAST results are available for this feature:
BLAST of TCONS_00063055 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ALG54.965e-8266.29Dolichyl-phosphate beta-glucosyltransferase OS=Hom... [more]
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