TCONS_00063054 (transcript) - C. hemisphaerica

Overview
NameTCONS_00063054
Unique NameTCONS_00063054
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1089

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00063054 ID=TCONS_00063054|Name=TCONS_00063054|organism=Clytia hemisphaerica|type=transcript|length=1089bp
CGATAATTGACACGTGACTTGTCGGAATTACCGTCTGTTTGAATGTCATA
AAAGTTCCAAACGCGTCGGTCTCTGTGCCCTGCCCAACATCATCATCCtt
taatctattttcaaaaggACAAAATTTCCGTTCCTCTATTCCTTAGCGCG
GATAATGTTataattaataattaataatttcGACCTACTTTGATTGACCT
AAAAGTATCgcgaaatttctaaatttattttcgcgaatcagcAAAAAATT
AGTCGAAAGTGGTCCTAAGAACTCCAAAAAACTGTGTTTTTACACTGAAT
ATCTGAAATTCGAAATTATCACGTCTGGGTTAAGCTTGGTTAAGCTTTTG
CGAGTCTGCAATCTCACGCGATTTCGAGAAATGTATTTTCACGAAATGGT
AAAAATTCGATTTAAATCTCGCGGAAATCGATCCGATTAAAGAGTAAAGA
TTCAAGAAATTCATCGCCTCTGTGGTAGATGATTATCTTAATTTGATCTT
TGTTTATCGCTTTTTTAGGGTGTCTTCTGTTCGAGAggtcaaaaaatttt
aatggtGGATGCAGATGGTGCTACCAAATTCTCTGATCTTCAACATGTAG
ACAAAGCCTTAGATGAGTTGAAAGGAGGTAAAAATGGGATGGCATTTTGT
GTTGGATCGAGAGCACATCTTCAGGATGATGCAGTTGCACAGagATCCTT
CTTCAGGAACATTTTGATGTTTGGGTTTCATTTCTTAGTTTCATTTCTTT
GCGTCAAAGATATAAAAGACACACAGTGTGGTTTCAAATTGTTCACACGA
AAAGCTGCACTGACATTATTCTCAAGCTTGCATGTGGAACGCTGGGCATT
TGATGTCGAACTTCTGTACATAGCGCAAAGACTAGGAATACCAATCGAAG
AAAAAGCTGTCAATTGGCAAGAAATTGATGGTTCCAAGATGGTACCTATT
TTTAGTTGGATTCAAATGGGCAAAGATTTGTTATTGATCCGAGCACGTTA
TGTGATAGGGGCATGGGCACTACAGCCATCTGGTCAACCCAATTTAGTTG
ATGTTGATGAGGATTAGGATCTATTTATATTTTTCCCAA
Run BLAST on NCBI

transcript from alignment at scaffold_379:2671..31926+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00063054 ID=TCONS_00063054|Name=TCONS_00063054|organism=Clytia hemisphaerica|type=transcript|length=29256bp|location=Sequence derived from alignment at scaffold_379:2671..31926+ (Clytia hemisphaerica)
CGATAATTGACACGTGACTTGTCGGAATTACCGTCTGTTTGAATGTCATA
AAAGTTCCAAACGCGTCGGTCTCTGTGCCCTGCCCAACATCATCATCCtt
taatctattttcaaaaggACAAAATTTCCGTTCCTCTATTCCTTAGCGCG
GATAATGTTataattaataattaataatttcGACCTACTTTGATTGACCT
AAAAGTATCgcgaaatttctaaatttattttcgcgaatcagcAAAAAATT
AGTCGAAAGTGGTCCTAAGAACTCCAAAAAACTGTGTTTTTACACTGAAT
ATCTGAAATTCGAAATTATCACGTCTGGGTTAAGCTTGGTTAAGCTTTTG
CGAGTCTGCAATCTCACGCGATTTCGAGAAATGTATTTTCACGAAATGGT
AAAAATTCGATTTAAATCTCGCGGAAATCGATCCGATTAAAGAGTAAAGA
TTCAAGAAATTCATCGCCTCTGTGGTAGATGATTATCTTAATTTGATCTT
TGTTTATCGCTTTTTTAGGGTGTCTTCTGTTCGAGAggtcaaaaaatttt
aatggtGGATGCAGATGGTGCTACCAAATTCTCTGATCTTCAACATGTAG
ACAAAGCCTTAGATGAGTTGAAAGGAGGTAAAAATGGGATGGCATTTTGT
GTTGGATCGAGAGCACATCTTCAGGATGATGCAGTTGCACAGGTACTACC
AGTGGTTTgttaaattaattttgaatgaGTCATTTCATGCACCAAATTAT
CCCGCttcaggcacgacggaagctttttggacctaccccggtaaGGGTCC
TATAAAATTAACCTCTATCTGTTCAACCGTCCatccgttcgttaccaact
tttctcgagattggttaattagttttttgcacaacaatgtgtaactataa
accctcgaatgtgacggagcccgattttcaaaaaaaaaattttggcccaa
aaaacggctaaaaaacgggttttttggactttgtgaaaaattgaatcatt
aatttttttgcatgaaagtagggtaacatcacaggtaaaagatggctcaa
gcatatttttgcaaaaaacatTTGTTGGCTCacaaaacgcatgtttatct
ataagaatcactattaataagcatatatcaatgttcttagtcaacttact
caatttttttatgagatagatgttttttttttgcttaattttgaagaata
tatgtgtgttgcttggcgtgtttttatagaaaaactggccaaattcgata
ttNATTAATAagcatatatcaatgttcttagtcaacttactcaatttttt
tatgagatagatgtttttttttgctcatgagggcttaattttgaagaata
tgtgtgttgcttggcgtgtttttatagaaaaactggccaaattcgatatt
tttttataagcacattatcaattacttaagtattagcttttctcgagatt
ggctctttcattcttNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNggctctttcattctttatgatt
ttttgcataaagatgcataactataaaccctcgaatgtgacggagcccga
ttttcgaaaaaaaaattatttgggcaaaaaaaacggctaaaaaacgggtt
ttttggactttgtgaaaattgaatcattagttttttctaatttttcgcat
gaaagtagataaaagatggctcaagcagatttttgtaaaaaaagaatttt
tcagctcaaaaaacgcatctttatctataagactattaataagcatacat
caatgttcttagccaaattactcaattttttgatgagatagatgtttttt
ttaatcacgaagtcttgaatatgaaagaatatttcaagagcatgaaattt
tggtttctaaacgttttttttataagaaacaaacgactaattttaataga
tcgtcactatttgtgttctgaatgattgtttaatggtcacgtcacgtaga
tatcaattactaggtcacagtgtggatgtaaaccacactgaaacaactgc
cttccatcacgcatatCACGCTCGCTAAAaaagcgcgcgcacattattaa
cgcctacatgtcatctccagtacattttagattattcattgaaaacaaat
GACAATATAGTCaattttcatgtctcgattattcaattccgaataaaaga
cattcagggaagaaaaaagagaaagacctgggtaatctagttaaaaaaac
caaaagtaaatggtagacaaagtaatgagccaaggcaaaatgagattagc
gtaccactatgaaagaaaccgccttcGGCGGTcgataaatgtgttaaatg
cataaccaggtaggtccataaaagtattacttgttatatctggtacggcg
aatgaggaaatttaagtgattttatagcgattttaccgacgaagaggaaa
atttcggtttttttttgtgaaaatcttgtACGGCAGTCGctgtacctgcc
gtacccgtcgCGTCGTGCCTACGCTTGGTGAATTATTTCCAGTCATGTGC
AAATCGAAAATTTCTATCATACTAGGAAGTTAAGTTGGGTCTGTGACAAC
GATTTCTCCATAAATTTATTCgtgacttttttctttgtttcagagATCCT
TCTTCAGGAACATTTTGATGTTTGGGTTTCATTTCTTAGTTTCATTTCTT
TGCGTCAAAGATATAAAAGACACACAGGtaatcaattcatgatattcatg
acgtaatgttttctacggaaataccccggttttagccagttgTGATAAAT
TTagactagacaaaagttgtataaaatttaccACTACTGGCAAAGACCGG
GGTCTTTTTCCGTAgataacattacatcatgaacATCATGAATTAGCTTC
ATAATAAATATAACAGGGTTTTTATGGATCCTGAAAATGTTTGGAGATGA
ATCTTCAAACccttgaaaactttgaaacctaaaaattttcaagagaaagc
tttgaaaaggttggttAATTTCATGTATTCGAATAAACTAATAATCCACA
AACAAGTGGTAAGTAAAACCTTGAATACCATGAAATAAGATTTAAGACAA
AGTTCATAGACAAAACAGACTGTATACATATTGGTTTCGATTCAATCCGA
TATTTGTTTCCATAAAAAGTTTCACTACTTTCAATTCACTACGGcaaagt
caagaaaaatttacaaaaaaatacgaatttaaatcgCCTTTCTCaatttt
cctttattttgtATTAAATTAAAAACAGAAGATAAGTTTTATCCTTGAAG
TAATCTTTTAAACGTGAGGTTTTCTTGGAATTTGGTTATTTTATTTATCA
CTACGCTTCATTCAGACTAagaaaaatcgctaaaaagggGAAATTTTTGA
CATATCTTTAGTAGAAGATTAGAAAGACGggcttttttttgtttaaatca
GATTAAAATACACAATGTGGGTGATTATGTAGACCCTGTTTTCATAGAGA
TTAAAGAAACGTTGTATTTGACCCTGTTTTCTGTAtatgtcaaaaatata
tttttgttctGTACTTTTTTTGTCCCGTGTTATTGTCCATATTTGATTGT
CAGAAATTTCCCATGAGCTCCTCATTTTAATCagtttcaattaaaaaaag
aaattcaaacctCATCAGAATTTGCTGATATAGCAAATAAAAAATGGTAG
CcaatatgaaataaaaatccTATAGAACAGTCAACTAAAAGTTGTATTGG
TCGATTTTTATGTCTGACATCGAAATCAAACTTATAGCTTACTCAATGAT
AACCGTTAAAATGAAGGCCTTGGGTTTTCCCCTCAACGGTATTTAAACCT
TTTATTTTTCAGGAGGGTAAATAAAGTCTTCCAAAAAATGACATTCCGTA
CTTTTTGAGGGGTAAAAGAAATACCTCGTTGTAAAGGTAATTTTGAGTGG
CTTGATGTAATAGAATTGGCACCACGTTGTCACCGCAAGTAAACTTCAAT
CCTTTTAATTCTCCTCTTATTATTTAGTGTGGTTTCAAATTGTTCACACG
AAAAGCTGCACTGACATTATTCTCAAGCTTGCATGTGGAACGCTGGTAAG
TCCAGCTTTCTTCTTTATTCTAACATCTGACCCTTCCCTAGTCTTGATGA
AGATTTTTCTTCGTTCAAAGCTCCAGATCAGGTATGGCTTCTTCTATTGA
CATTTattctaaaaagaaaagaattcgTGTAATGCTTTGCTAGTTGCTAC
CTTTGAAAGTAAGTTTTCAATCTATATTCTTAAAGAGACATCATGATTAG
TAGTGTTCGGTGTACAGTATATCAATTATCAAATCATCAGATAAAAAAGT
TTACTTTGTAATTCTGACGAAACTAGAAATTGACACTCTTACATAGACCT
TGCATTGGTTTATGCGGGAGGTCAATTATTTCGCTACTTAACTTAAACGT
TAAAAGTTCTTTCTTCGAAACTGAATTTACACAAATTAATGTTCATaccg
tttttattttttcacttctcTATTGCAAGGAAGCAATTCAAGAAGTTCAT
ttcatattttgagttttgagagatgaaaaattaatgttttcaaaaattaa
cgaCTATTGGAGCCAACCAGTTTGGCGCTGTAGttgtagaaaagaaaaac
aaaattttaaaaatgaaaatcactTGTATTAAGTGCTGATAACACTGGCA
ACCCACTAACTTTATAAGGAAGAATCATTCCTAATAACTTcacagaaaaa
gtgttttgatttACACTTTAGAAGAAGAATTTTGTTCTGACGTACCCATA
AaacagtcggaggcgacccgaaggcttctctttcgatagctatctatccG
AAGGTATAGAAgagcgccactctttctccctggattactccacttaccct
tgatccttctcttaattgttGAGTATCAGAGTATCAGCAGAGAGGCAGCA
AGTACCATTTTCGGAATCTTTGTTATGACTTACAACCTTGcccaccgtag
ccggatgctctaccactgaacTAAGGTCGcttagaaaaaatataaaacct
aCCTTAAAAACATAAGCGGAACAAATTCAAAAACCAATCTTGTCTAATAT
TATtgcaaaagtaaaaataattttattttgttttttgaaaagaaagctGG
TACTACTGTAGAGGATCGAGGAAAATAAAATCAAGAaggttgtttttgtt
tttttctcaacgcttgaaaatatttttgaagtgaATGTGGACCGACACAC
CTTGTGGAATACTGGCAcataaactttttataaaatcaatatCAACATAA
AAAGAGAGATAAATAGAAATGGTTTCTTTCTAGCCTTCTGGTGTCCAGTA
ACTTAGCCTGGACCCAATTCTTGAATCTGAATTTGAAGTAAAAATCAATC
GATTTCGATTGGTGCATCCAAAATTGTTACATAAAAATACTTAAGTTaca
taaatattttgataaattttactcTTATGCTCTCGAACCTATATAgctgt
ttttttcttcaaaattcctAATTTTAGGTGTGAAGGAGGAAAAATAAGAT
ACGAATTTTTGGAAACCTTCGTTTTATTTTCCCCCAAAAAATTTGTGTCG
GCGAAACACGAATTATAAACTTCTGGCGAAATCACAGAAAGGCGTCATGT
ATTTTatgcttgaaaattttttctttacaatCAACTAATATTACTTGGCT
ATTCGCAGCCTAACGAGAATCTTCAACCCACTATTGATCCTCGTGATCGA
AGTATAGACataattgggctattccagaaatactatgtaccccctatgtt
gaggagttgtgacgtccagggtgacCTTGGAAATATAAAATCCAGGGGTC
TGGTTTTTGTAGTGTAAAAATGAGAAGCtaccaaaaaatgaaaacaataa
tcCAAGTTGGTCCtgaaaaatcgagaaaaaaaataaatgggAGTCACCTT
TCCCAGGCCTCTTTTGACGCTCCTTAAAATTCGACGCTCTTCTATTAGAT
atgttctattattcgataatattgaaagtcaccatcaacaagaaactctc
ataaacgacgctctactattggTCCCTTaattgatgaaaatccaattccc
tttgaaaatataattatggatCGTCCACTTGCTTATGATTTTCTATTGAT
TTGGTAGTTTATAACTTCTTTTATTCTAAAAGGCTTTTACGGACCTATTC
TGTTTCATAAAAAAGACTAGCAGAGAACGTCAAAGTCTCCTTATCATCAT
CGTTCTGACGTCAGTGACGTTAAATTGACATACGAGCCGCACGTCGGGCA
ACACGAGTTCCGTTCTAAAAGCGGACTATTCGATctagaatttaaaaatt
gatcaGCTGGAATCAGTGAGCTCTCAGCATCAAGCATCAAACTGTCATGG
CTGTTCGTTTCTTTTGGGTAAACCCCTTTCTTAAGATTGTAATCAACCAC
TGATTTAGAGATTGACGCATACAACTCTTTAATGTTATGCGATGAATTGC
CTCCACCACCGCTTGAAGAATCTTGTGTGATCCTATAGAAAAACAACAGT
TTTCTTTTCACCTTTTTGTTCACACGGTTCACTAAATATTGAGTCGGTTG
GAACGAACATGGACCCACTCCAGCTAAGATGATGATAACTGGCTCGTCAC
TCAAGTCTGATAAATATTTCTCAAATTCACTTTCATCGTTACTGACCCCG
TCTGTTACGATCAACATCACATAAAATACATCACTCGAACTTTCTCGAAC
CTCTCCAATTTCAACCAAGTTGGATTTATCATAAAGTTTCGACATAATCT
GTTTAAAGTATGTTGGACCACCTGGTTCTACCATGGGGATAATATCTTTA
TAGCTTAGAATAATGGCGTCTAGATCCGcattatttttattgatttcaaa
acaatagTCGTCAATTTCACCCTTTGTTAAAATGTTGTcgttattgttgt
tgttgttaccCACGAGTTGAAATTCGTTATTACCATCTATCGCCTTTAGA
TTATTTAATGTGCTTTCTATGAAGCATTGACTTGATCTGTTATTGGGTTG
ACTTTCCAATACTTTCGAATATAATTTCCCACCGAACCCATACAAAGGGA
TTCGCTTGCAATAATATGATAACCATGTTCCTACTTGCTTCAGAGCGGTG
ATGTAATCAttgctaccattttgtttttgaagatgaTGTAACGAACGCTC
ATTGGTCAATGGGCAACCGTTGGAGAGAGTGAAATCGATGCCGATGctac
atttgatttgagttcCACTGCGAATGTAATCGACCAATGAGAATTGTTCA
TCCACTGACACGTGATACAGTTTCAAATAGCCTGCATTCGATTCCTTGTT
TTTAGCACGGCCTAACGAACGTTTTGAGCTTGACATTCTACGCAAGTTGA
TCTCCTTTACCAGTCCCTTATAGCTTTGCAATTGGTGTAATGTTGTCACA
AGCTGACCTTTAATCTCTGGTTCACCTTTTGCGTTGTGTGCTAAAATTTG
AAAGAGTAAATTTCCATCCCTGTCTCCATTACAAAGCTTCTGTATGTTAA
TACTGAATAGTTTCCAACGCGGATAGTTTGCTTTGAAAATGACTTCACTC
CGATAGACAGGATGGTAGGTATCCTCGAAAATCTCTCGATTAATTTGAAG
AAATACACTTGCTCGATTAAAGAAATGTTTCTTGGCCAGTTTACCAGCAC
CTAGACTTAAGCGTActtcttttttgctttcaattGAGTTCCGAACCGGT
ATAGCACACATTGACAGTGTCCCAGTCTTCTTACCGCTTTCAtgtttaaa
atgaaaatctttgaaatctaGGTCACCTCGAAGTAAATTCTCAACCTCTA
AATCATCTGTTGTACCTAGAAGTTTACATTTTTGTAAATCTCTAGAACTC
AAATTATCACCATCATACAAAGACGCCTTTAAACGTCTATTGTCCGTATT
GTTTGTATCGACATAAAAGGTTTCAGTGAACAAGGGTCTGTGACAATTCG
CTATAGTTTCCGTTCTGCCGTACTCAAACCATTTCCCGTAACGGCGGACG
TGTAGTACGACAAATGGATCAGTTTTGCTGAACATATCAACAGATATGAT
GTCACGGCACTTGATAAATAACTCGATGTACATTTTATCGCTCTTACTCG
CCTCTTTGGCGATGTTTTCAACGCGCGTTTTCGTTGGTGATTTTGGCAGG
TAGATTGTTGGTGACTGTGGAAGACTCGTTGTTGAAGCAATCATTAAGTC
TGGCATCACTTGtgatcttttctttttgaacaTTGTTCAAATTTATTCTG
AAAATTCGATTATATGTTAAAGTCACTCTTCTTCANNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTACGGCAGT
CGctgtacctgccgtacccgtcgCGTCGTGCCTACGCTTGGTGAATTATT
TCCAGTCATGTGCAAATAGAAAATTTCTATCATACTAGGAAGTTAAGTTG
GGTCTGTGACAACGATTTCTCCATAAATTTATTCgtgacttttttctttg
tttcagagATCCTTCTTCAGGAACATTTTGATGTTTGGGTTTCATTTCTT
AGTTTCATTTCTTTGCGTCAAAGATATAAAAGACACACAGGtaatcaatt
catgatattcatgacgtaatgttttctacggaaataccccggttttagcc
agttgTGATAAATTTagactagacaaaagttgtataaaatttaccACTAC
TGGCAAAGACCGGGGTCTTTTTCCGTAGAGAACATTACATCATGAACATC
ATGAATTAGCTTCATAATAAATATAACAGGGTTTTTATGGATCCTGAAAA
TGTTTGGAGATGAATCTTCAAACccttgaaaactttgaaacctAAAACTT
TTCAAGAGAAAgctttgaaaaggttggttAATTTCATGTATTCGAATAAA
CTAATAATCCACAAACAAGTGGTAAGTAAAACCTTGAATACCATGAAATA
AGATTTAAGACAAAGTTCATAGACAAAACAGACTGTATACATATTGTTTT
CGATTCAATCCGATATTTGTTTCCATAAAAAGTTTCAATACTTTCAATTC
ACTACGGcaaagtcaagaaaaatttacaaaaaaatacgaatttaaatcga
ctttctcaattttcctttattttgtATGAAATTAAAAACAGAAGATAAGT
TTTATCCTTGAAGTAATCTCTTAAACGTGAGGTTTTCTTGGAATTTggtt
attttaattttatttatcaCTACGCTTCATTCAGACTAagaaaaatcgct
aaaaagggGAAATTTTTGACATATCTTTAGTCGAAGATTAGAAAAACGgg
cttttttttgtttaaatcaGATTAAAATACACAATGTGGGTGATTATGTA
GACCCTGTTTTCATAGAGATTAAAGAAACGTTGTATTTGACCCTGTTTTC
TGTatatctcaaaaatatatttttgctcTGTACTTTTTTTGTCCCGTGTT
ATTGTCCATATTTGACTGTCAGAAATTTCCCATGAGCTCCTCATTTTAAT
CagtttcaatttaaaaaaagaaattcaaacctCATCAGAATTTGCTGATA
TAGCAAATAAAAAATGGTAGCcaatatgaaataaaaatccTATAGAACAG
TCAACTAAAAGTTGTATTGGTCGATTTTTATGTCTGACATCGAAATCAAA
CTTATAGCTTACTCAATGATAACCGTTAAAATGAAGGCCTTGGGTTTTCC
CCTCAACGGTATTTAAACCTTTTATTTTTCAGGAGGGTAAATAAAGTCTT
CCAAAAAATGACATTCCGTACTTTTTGAGGGGTAAAAGAAATACCTCGTT
GTAAAGGTAATTTTGAGTGGCTTGATGTAATAGAATTGGCACCACGTTGT
CACCGCAAGTAAACTTCAATCCTTTTAATTCTCCTCTTATTATTTAGTGT
GGTTTCAAATTGTTCACACGAAAAGCTGCACTGACATTATTCTCAAGCTT
GCATGTGGAACGCTGGTAAGTCCAGCTTTCTTCTTTATTCTAACATCTGA
CCCTTCCCTAGTCTTGATGAAGATTTTTCTTCGTTCAAAGCTCCAGATCA
GGTATGGCTTCTTCTATTGACATTTattctaaaaagaaaagaattcgTGT
AATGCTTTGCTAGTTGCTACCTTTGAAAGTAAGTTTTCAATCTATATTCT
TAAAGAGACATCATGATTAGTAGTGTTCGGTGTACAGTATATCAATTATC
AAATCATCAGATAAAAAAGTTTACTTTGTAATTCTGACGAAACTAGAAAT
TGACACTCTTACATAGACCTTGCATTGGTTTATGCGGGAGGTCAATTATT
TCGCTACTTAACTTAAACGTTAAAAGTTCTTTCTTCGAAACTGAATTTAC
ACAAATTAATGTTCATaccgtttttattttttcacttctcTATTGCAAGG
AAGCAATTCAAGAAGTTCATttcatattttgagttttgagagattcaaaa
aattaacgacTATTGGAGCCAACCAGTTTGGCGCTGTAGttgtagaaaag
aaaaacaaaattttaaaaatgaaaatcactTGTATTAAGTGCTGATAACA
CTGGCAACCCACTAACTTTATAAGGAAGAATCATTCCTAATAACTTcaca
gaaaaagtgttttgatttACACTTTAGAAGAAGAATTTTGTTCTGACGTA
CCCATAAaacagtcggaggcgacccgaaggcttctctttcgatagctatc
tatccGAAGGTATAGAAgagcgccactctttctccctggattactccact
tacccttgatccttctcttaattgttGAGTATCAGAGTATCAGCAGAGAG
GCAGCAAGTACCATTTTCGGAATCTTTGTTATGACTTACAACCTTGccca
ccgtagccggatgctctaccactgaacTAAGGTCGcttagaaaaaatata
aaacctaCCTTAAAAACATAAGCGGAACAAATTCAAAAACCAATCTTGTC
TAATATTATtgcaaaagtaaaaataattttattttgttttttgaaaagaa
agctGGTACTACTGTAGAGGATCGAGGAAAATAAAATCAAGAaggttgtt
tttgtttttttctcaacgcttgaaaatatttttgaagtgaATGTGGACCG
ACACACCTTGTGGAATACTGGCAcataaactttttataaaatcaatatCA
ACATAAAAAGAGAGATAAATAGAAATGGTTTCTTTCTAGCCTTCTGGTGT
CCAGTAACTTAGCCTGGACCCAATTCTTGAATCTGAATTTGAAGTAAAAA
TCAATCGATTTCGATTGGTGCATCCAAAATTGTTACATAAAAATACTTAA
GTTacataaatattttgataaattttactcTTATGCTCTCGAACCTATAT
AgctgtttttttcttcaaaattcctAATTTTAGGTGTGAAGGAGGAAAAA
TAAGATACGAATTTTTGGAAACCTTCGTTTTATTTTCCCCCAAAAAATTT
GTGTCGGCGAAACACGAATTATAAACTTCTGGCGAAATCACAGAAAGGCG
TCATGTATTTTatgcttgaaaattttttctttacaatCAACTAATATTAC
TTGGCTATTCGCAGCCTAACGAGAATCTTCAACCCACTATTGATCCTCGT
GATCGAAGTATAGACataattgggctattccagaaatactatgtaccccc
tatgttgaggagttgtgacgtccagggtgacCTTGGAAATATAAAATCCA
GGGGTCTGGTTTTTGTTGTGTAAAAATGAGaagctctcaaaaaatgaaaa
caataatcCAAGTTGGTCCtgaaaaatcgagaaaaaaaataaatgggAGT
CACCTTTCCCAGGCCTCTTTTGACGCTCCTTAAAATTCGACGCTCTTCTA
TTAGATatgttctattattcgataatattgaaagtcaccatcaacaagaa
actctcataaacgacgctctactattggTCCCTTaattgatgaaaatcca
attccctttgaaaatataattatggatCGTCCACTTGCTTATGATTTTCT
ATTGATTTGGTAGTTTATAACTTCTTTTATTCTAAAAGGCTTTTACGGAC
CTATTCTGTTTCATAAAAAAGACTAGCAGAGAACGTCAAAGTCTCCTTAT
CATCATCGTTCTGACGTCAGTGACGTTAAATTGACATACGAGCCGCACGT
CGGGCAACACGAGTTCCGTTCTAAAAGCGGACTATTCGATctagaattta
aaaattgatcaGCTGGAATCAGTGAGCTCTCAGCATCAAGCATCAAACTG
TCATGGCTGTTCGTTTCTTTTGGGTAAACCCCTTTCTTAAGATTGTAATC
AACCACTGATTTAGAGATTGACGCATACAACTCTTTAATGTTATGCGATG
AATTGCCTCCACCACCGCTTGAAGAATCTTGTGTGATCCTATAGAAAAAC
AACAGTTTTCTTTTCACCTTTTTGTTCACACGGTTCACTAAATATTGAGT
CGGTTGGAACGAACATGGGCCCACTCCAGCTAAGATGATGATAACTGGCT
CGTCACTCAAGTCTGATAAATATTTCTCAAATTCACTTTCATCGTTACTG
ACCCCGTCTGTTACGATCAACATCACATAAAATACATCACTCGAACTTTC
TCGAACCTCTCCAATTTCAACCAAGTTGGATTTATCATAAAGTTTCGACA
TAATCTGTTTAAAGTATGTTGGACCACCTGGTTCTACCATGGGGATAATA
TCTTTATAGCTTAGAATAATGGCGTCTAGATCCgcattgtttttattgat
ttcaaaacaatagTCGTCAATTTCACCCTTTGTTAAAATGTTGTcgttat
tgttgttgttgttaccCACGAGTTGAAATTCGTTATTACCATCTATCGCC
TTTAGATTATTTAATGTGCTTTCTATGAAGCATTGACTTGATCTGTTATT
GGGTTGACTTTCCAATACTTTCGAATATAATTTCCCACCGAACCCATACA
AAGGGATTCGCTTGCAATAATATGATAACCATGTTCCTACTTGCTTCAGA
GCGGTGATGTAATCAttgctaccattttgtttttgaagatgaTGTAACGA
ACGCTCATTGGTCAATGGGCAACCGTTGGAGAGAGTGAAATCGATGCCGA
TGctacatttgatttgagttcCACTGCGAATGTAATCGACCAATGAGAAT
TGTTCATCCACTGACACGTGATACAGTTTCAAATAGCCTGCATTCGATTC
CTTGTTTTTAGCACGGCCTAACGAACGTTTTGAGCTTGACATTCTACGCA
AGTTGATCTCCTTTACCAGTCCCTTATAGCTTTGCAATTGGTGTAATGTT
GTCACAAGCTGACCTTTAATCTCTGGTTCACCTTTTGCGTTGTGTGCTAA
AATTTGAAAGAGTAAATTTCCATCCCTGTCTCCATTACAAAGCTTCTGTA
TGTTAATACTGAATAGTTTCCAACGCGGATAGTTTGCTTTGAAAATGACT
TCACTCCGATAGACAGGATGGTAGGTATCCTCGAAAATCTCTCGATTAAT
TTGAAGAAATACACTTGCTCGATTAAAGAAATGTTTCTTGGCCAGTTTAC
CAGCACCTAGACTTAAGCGTActtcttttttgctttcaattGAGTTCCGA
ACCGGTATAGCACACATTGACAGTGTCCCAGTCTTCTTACCGCTTTCAtg
tttaaaatgaaaatctttgaaatctaGGTCACCTCGAAGTAAATTCTCAA
CCTCTAAATCATCTGTTGTACCTAGAAGTTTACATTTTTGTAAATCTCTA
GAACTCAAATTATCACCATCATACAAAGACGCCTTTAAACGTCTATTGTC
CGTATTGTTTGTATCGACATAAAAGGTTTCAGTGAACAAGGGTCTGTGAC
AATTCGCTATAGTTTCCGTTCTGCCGTACTCAAACCATTTCCCGTAACGG
CGGACGTGTAGTACGACAAATGGATCAGTTTTGCTGAACATATCAACAGA
TATGATGTCACGGCACTTGATAAATAACTCGATGTACATTTTATCGCTCT
TACTCGCCTCTTTGGCGATGTTTTCAACGCGCGTTTTCGTTGGTGATTTT
GGCAGGTAGATTGTTGGTGACTGTGGAAGACTCGTTGTTGAAGCAATCAT
TAAGTCTGGCATCACTTGtgatcttttctttttgaacaTTGTTCAAATTT
ATTCTGAAAATTCGATTATATGTTAAAGTCACTCTTCTTCANAATCGACC
AATGAGAATTGTTCATCCACTGACACGTGATACAGTTTCAAATAGCCTGC
ATTCGATTCCTTGTTTTTAGCACGGCCTAACGAACGTTTTGAGCTTGACA
TTCTACGCAAGTTGATCTCCTTTACCAGTCCCTTATAGCTTTGCAATTGG
TGTAATGTTGTCACAAGCTGACCTTTAATCTCTGGTTCACCTTTTGCGTT
GTGTGCTAAAATTTGAAAGAGTAAATTTCCATCCCTGTCTCCATTACAAA
GCTTCTGTATGTTAATACTGAATAGTTTCCAACGCGGATAGTTTGCTTTG
AAAATGACTTCACTCCGATAGACAGGATGGTAGGTATCCTCGAAAATCTC
TCGATTAATTTGAAGAAATACACTTGCTCGATTAAAGAAATGTTTCTTGG
CCAGTTTACCAGCACCTAGACTTAAGCGTActtcttttttgctttcaatt
GAGTTCCGAACCGGTATAGCACACATTGACAGTGTCCCAGTCTTCTTACC
GCTTTCAtgtttaaaatgaaaatctttgaaatctaGGTCACCTCGAAGTA
AATTCTCAACCTCTAAATCATCTGTTGTACCTAGAAGTTTACATTTTTGT
AAATCTCTAGAACTCAAATTATCACCATCATACAAAGACGCCTTTAAACG
TCTATTGTCCGTATTGTTTGTATCGACATAAAAGGTTTCAGTGAACAAGG
GTCTGTGACAATTCGCTATAGTTTCTGTTCTGCCGTACTCAAACCATTTC
CCGTAACGGCGGACGTGTAGTACGACAAATGGATCAGTTTTGCTGAACAT
ATCAACAGATATGATGTCACGGCACTTGATAAATAACTCGATGTACATTT
TATCGCTCTTACTCGCCTCTTTGGCGATGTTTTCAACGCGCGTTTTCGTT
GGTGATTTTGGCAGGTAGATTGTTGGTGACTGTGGAAGACTCGTTGTTGA
AGCAATCATTAAGTCTGGCATCACTTGtgatcttttctttttgaacaTTG
TTCAAATTTATTCTGAAAATTCGATTATATGTTAAAGTCACTCTTCTTCA
TATTCAAAATGTATCTCTAGTAAAAACAGGTTTCTACATAAACGAACCAG
TTAGTTATGAAGGTTCTTCTTTCAAATGTGcgaattcttttcaatactAC
ACAGTAGTGCTCGTTTCTTTTTTTCCAACCGTTTCATTAATTGCTCGTGA
ACGTCTGGTACCAAAACTTTCATGTACATTTTGATGAAAGCTCTATTGta
aagaaaagtaaaagaataaGTTAATTATGACAGTTTTCTCAAAATTGTTT
TCATCGCGTTACCATAGTAACTACAATTATTATTATGGTACaagattttt
cacaaaatgtaATAATTTCTAATGTCATTATTTGATAATTTGCACCAGGG
AATTTACATAATAATGTGAATTTTCTTTGTGTTATTCCTCTTTGAAGTTT
CGAAATCGTTATATTACTTGCAAATTTTCGAGGGCCGCCCCTTTCAAAAG
ATATATGGGAtgtttaaggctttttcttgaAAGGGTACTGCTGGACTCAA
GGGGCTTCTTGTGCATAGTTTTACCAAGGCCCTAATGGACCTTGTATGTA
AACCGACCCGATATCTactaaaatttcgaaatttattgCCGTAAGGGCAA
TATTATACGTGAAATACACACTGCTGTATGGACCTTATAATGCAAACCCT
GCAAAGATATAGAATTTCAATGCAGAATTTGATATGCTTAATtagaaaag
taagaaaaatctaGCTTTTCACCTAGTTTTCCAAGTACCAAGTTTTCTAT
CTATCCGCCTATACTACACCCACTTTTGCATTTTAATGTCATCCTATAAG
ACTAGACAGTCATGGTTTCAATAAAAGAGGAGGAATACGCAAGGACTCAT
TGGGAGCGTCCATATTCTACATCAAATGTTTCAGTTTATATTGTATATTG
TAAAAGGATCTGGTTAATAGCGGTTGTttaaaaggatattttttcAGAAA
GGAGCCACGAATTATGCcaggcaaaagtttttatgaccaaaaaacTGAAG
TTCAGGCAAAACCCCTCAGCCCCCAAAATATGTAAGGGTTGGCCCCTTAC
TATATAAGGGGAATTTGAAAATGGTCGTCAGAACTTTACATATTCTCCTC
TTGTATCAATTTTATCAGGGCATTTGATGTCGAACTTCTGTACATAGCGC
AAAGACTAGGAATACCAATCGAAGAAAAAGCTGTCAATTGGCAAGAAATT
GATGGTAAGAAACCTTTTACGGCATATTTGGTTAGATTTATCAGGTCTTA
TCCctgtttactttatttttttcatatagaGTTTCATGGAGTTTCGATCG
GATGATTCTATCCACAAGAAACTACATCATTCGTTTTTTTACTACTCAGT
TTCCCTTATGATTTTTCTAATTGGGTATTTAATGCCTCATATGACCAACT
AATCCATTGTTACTAtcataatcttttttttcattcacgATTTTTAGGTT
CCAAGATGGTACCTATTTTTAGTTGGATTCAAATGGGCAAAGATTTGTTA
TTGATCCGAGCACGTTATGTGATAGGGGCATGGGCACTACAGCCATCTGG
TCAACCCAATTTAGTTGATGTTGATGAGGATTAGGATCTATTTATATTTT
TCCCAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_039498XLOC_039498Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00063054-exon-scaffold_379-1491911889:2671..3362TCONS_00063054-exon-scaffold_379-1491911889:2671..3362Clytia hemisphaericaexon
TCONS_00063054-exon-scaffold_379-1510915933:2671..3362TCONS_00063054-exon-scaffold_379-1510915933:2671..3362Clytia hemisphaericaexon
TCONS_00063054-exon-scaffold_379-1575043694:2671..3362TCONS_00063054-exon-scaffold_379-1575043694:2671..3362Clytia hemisphaericaexon
TCONS_00063054-exon-scaffold_379-1491911889:5314..5397TCONS_00063054-exon-scaffold_379-1491911889:5314..5397Clytia hemisphaericaexon
TCONS_00063054-exon-scaffold_379-1510915933:5314..5397TCONS_00063054-exon-scaffold_379-1510915933:5314..5397Clytia hemisphaericaexon
TCONS_00063054-exon-scaffold_379-1575043694:5314..5397TCONS_00063054-exon-scaffold_379-1575043694:5314..5397Clytia hemisphaericaexon
TCONS_00063054-exon-scaffold_379-1491911889:6698..6765TCONS_00063054-exon-scaffold_379-1491911889:6698..6765Clytia hemisphaericaexon
TCONS_00063054-exon-scaffold_379-1510915933:6698..6765TCONS_00063054-exon-scaffold_379-1510915933:6698..6765Clytia hemisphaericaexon
TCONS_00063054-exon-scaffold_379-1575043694:6698..6765TCONS_00063054-exon-scaffold_379-1575043694:6698..6765Clytia hemisphaericaexon
TCONS_00063054-exon-scaffold_379-1491911889:31439..31524TCONS_00063054-exon-scaffold_379-1491911889:31439..31524Clytia hemisphaericaexon
TCONS_00063054-exon-scaffold_379-1510915933:31439..31524TCONS_00063054-exon-scaffold_379-1510915933:31439..31524Clytia hemisphaericaexon
TCONS_00063054-exon-scaffold_379-1575043694:31439..31524TCONS_00063054-exon-scaffold_379-1575043694:31439..31524Clytia hemisphaericaexon
TCONS_00063054-exon-scaffold_379-1491911889:31768..31926TCONS_00063054-exon-scaffold_379-1491911889:31768..31926Clytia hemisphaericaexon
TCONS_00063054-exon-scaffold_379-1510915933:31768..31926TCONS_00063054-exon-scaffold_379-1510915933:31768..31926Clytia hemisphaericaexon
TCONS_00063054-exon-scaffold_379-1575043694:31768..31926TCONS_00063054-exon-scaffold_379-1575043694:31768..31926Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_379supercontigscaffold_379:2671..31926 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
9.32613	9.70386	3.67406	3.75425	5.1539	4.53374	8.93085	9.51818	4.90172	4.76693	3.48235	2.97751	2.41387	1.62694	3.03	2.95872	5.14255	4.05031	1.66083	2.80744	3.11413	3.12861	4.32687	5.33687	5.83234	4.30698	4.15279	2.81395	5.14896	3.53356
Blast
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BLAST of TCONS_00063054 vs. Swiss-Prot (Human)
Match: ALG5 (Dolichyl-phosphate beta-glucosyltransferase OS=Homo sapiens GN=ALG5 PE=1 SV=1)

HSP 1 Score: 250.366 bits (638), Expect = 1.413e-79
Identity = 116/175 (66.29%), Postives = 142/175 (81.14%), Query Frame = 3 
Query:  519 GVFCSRGQKILMVDADGATKFSDLQHVDKALDELKGGKNGMAFCVGSRAHLQDDAVAQRSFFRNILMFGFHFLVSFLCVKDIKDTQCGFKLFTRKAALTLFSSLHVERWAFDVELLYIAQRLGIPIEEKAVNWQEIDGSKMVPIFSWIQMGKDLLLIRARYVIGAWALQPSGQPN 1043
            G+F SRG+KILM DADGATKF D++ ++K L++L+   N MA   GSRAHL+ +++AQRS+FR +LM+GFHFLV FLCVK I+DTQCGFKLFTR+AA   FSSLHVERWAFDVELLYIAQ   IPI E AVNW EI+GSK+VP +SW+QMGKDLL IR RY+ GAW L+ + + N
Sbjct:  150 GIFSSRGEKILMADADGATKFPDVEKLEKGLNDLQPWPNQMAIACGSRAHLEKESIAQRSYFRTLLMYGFHFLVWFLCVKGIRDTQCGFKLFTREAASRTFSSLHVERWAFDVELLYIAQFFKIPIAEIAVNWTEIEGSKLVPFWSWLQMGKDLLFIRLRYLTGAWRLEQTRKMN 324
The following BLAST results are available for this feature:
BLAST of TCONS_00063054 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ALG51.413e-7966.29Dolichyl-phosphate beta-glucosyltransferase OS=Hom... [more]
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