TCONS_00062931 (transcript) - C. hemisphaerica

Overview
NameTCONS_00062931
Unique NameTCONS_00062931
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2856

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00062931 ID=TCONS_00062931|Name=TCONS_00062931|organism=Clytia hemisphaerica|type=transcript|length=2856bp
CCTAACTAGAAATTGACTCATTCCTGCTTTACGATCGATGGTGCTTTCTG
TCGAAAAGGACTACTACTTCAAAGGACAAAATTCTTCAAGAATATGGATG
GCGGAAAAATTGCTTCACTTATAATTTCACTATGCGCCTTTCTTTTCATA
ACAATGAGTATGGCTGGACCTGAGTGGTCGATAAGATACGGTCATAACGA
TGATAAGGTGGGCTATTCAGGGCTATGGAGAGCATGCAGCCGAATTTACA
CAACTATGACAGCTTACACAACTCAATGTAAATCTATAGATGACGCACCA
AGACAACAATTCAAAGGAGCAACCTATTTTAGGGCAACTCGTGCATTTAT
GTGTTTGGCCTTCATATCAAGTCTGTTTGGTGTTGTATTATCTGGATTGC
ATATTAAGTTCATGCAAATTAATTATAAGCACTTGGTTTTCAACCAATCC
ATCACAGCTTTTTGTGCAATAACTGGTCTTTCAATCTATTCATCATTAGA
AGAGGATAGCATAAAATCAACAGCGGGATACGAGTTAGGCTGGTCATATG
CGCTTGGTTGGGTCGGAGTATTTTTCACCTTCCTCTCGGTAGGAATCATA
CAGATATGGCCACATATTTGTGATTGTCAATTCCAGTGTGATTGTACACA
AGTTCCGGCACAACCAAATGTACAAAATGATCTGCAACCCAGTCTACAAA
GTGCCAGTCATTACGGCAACATGCCACCACCTTATATCAGTGGAAAAGAA
TCAGGAGAAGGTCAGGTTAATATCGCGGTTAATGCTGATAATCCAGAAAA
GCAAAATCTTGAAGGCGCCATGGCATAAAAAAGGCCGACAAAATAGTAAG
ATTGTGTTCaatagttctatttatactgagacagttaatttgtctgagac
gagcaatttagaaaatgagaattatggaggagtgtactttccattcatgt
ttcaatagATAGGATCTCCTCCAAAGATCACATTTTATAAATTACTcgtc
tcagacgatttttccgtctcagtataaatggaactaaTGTAATACAAAAC
AGCATGGTACAGCAATTTAATTTAGCTTGTATAGTTACacatcatttcat
ttttttgtaaatcttgaaaaacgccACTTTAGGCGTACAACATTTCCCAA
GCAGAAAGAATgcaaggaaaaaatctttttcacgAGCGTTCACGAGCATA
AACTTCCACAAATCAAAACTTTCATCgaacattttcaaacaaacaaatag
CTTAGAgagacaaatacttcttgaattaGATTGAGTCTTTTGACTTGAAC
CTTTTaccagattttctattttgtcaaaagtttttcacaagcataaactt
tcgcaaatagCCCTGGACGAAAGGATTTGCGAATACATTAACTTTCGGAA
AAAGGATAAAACTCGAAaaaattgcgaaagtttctacttgcgaaaatttt
caatctcGTATCAGGGCCAATTGcacaactttttgattttactgactGAC
AATGGTACAATCGTTGGTATCTTTTGTGAGCGCTATCAGTTCTATAAAAA
AGAGCAAATAGGCTATTCCACAGTCAAAATGGATCATGGGttatcaggac
tgattgcgcctagATAACGGTTTCcctcttcaaaaaatttcaaactttgg
accaatagtaagtcgtcttTAGcacgcagtggtcctgattacccattacg
ctttgcgactgtgaaatggcctattagGGGACTGGGTTCGACTTtggaaa
gtttgtacgcctccATTGCTCCGAATGTCAACTTTACTATTGAGTTTTCA
GAAAGTTTAAGATAACaaataaaagaacaattttacttttaatttcCCCT
GTTACTTTCTCAACCATTTTGATTTATCATATTTGCAGGttagttctttt
gtttatactTTTGCTACCATTTTGCTAGATCCAAACCATTTCTTGTACAT
ATACTATTTTTAAACTATTTCAAGCACATTTATGATGACATTAATATTTT
ACCTAACTAAAACGAATCAGACTTCAACACTTAACTCGGGTGGGGAGGGG
GTGTGATATTTAGGCTAATGGAGGGTACGTGTATGTGCTGCCCTTAAAAG
TACCTTTTCAAACTTCCAAAGTCCCACGTAGTgtcagaaaaatagaaaaa
tttcagCTTTTTGCTCTTAAAAAGtccgaaatttggtcaaattagtctca
acaagggtcgtaaaattaacaattttttccccttttttctcctttttaat
cTCTATAAGGGTTTCGAGGGTCAAAAGTTGGGAGGCACATAAGTacctgt
cagctcgcaaccctaatACCCTCTGGGCACTTAACattaaaacattcatt
tttagtCTTCCATTCCAGCTATCATTTCCCGATTCTAGTATGTCTTTATG
ATGTTTTATCTTTTGTATTGCGTTTTACCCGCCAAGGTCAGGGACATAAA
TGACCAGTATTTTTCATGAATCATATTCACGATTCGACTTATAATTAGCC
CATACTTTAGCCTTATTTAAATGTACTTATTTATTAATTTGTATATTTTG
CACTGTTATTCGTAATACACcatttgtatcttttttttcCGTTTGAATTT
TATGATTAAACACTAATTAATCACTTCAGAAACGCTATGTATATTTATTC
GAACACCAATGGCTACAACCCGTGTCTCgatgccccggtggaacttttct
gTCTTAGTGTGAATCCAAATAGGCGATAAAAAAAACGATTTTTGCACCTT
CCAATTCAATTTCCAATGAGCATTTCCCAGTGTGAGGTATTTTTCCAGCG
GCGAGGATTTTTCGGACAAGTGTGGGCTCAAaagggtctgtgacacgggg
tGTAGG
Run BLAST on NCBI

protein sequence of TCONS_00062931-protein

>TCONS_00062931-protein ID=TCONS_00062931-protein|Name=TCONS_00062931-protein|organism=Clytia hemisphaerica|type=polypeptide|length=244bp
MDGGKIASLIISLCAFLFITMSMAGPEWSIRYGHNDDKVGYSGLWRACSR
IYTTMTAYTTQCKSIDDAPRQQFKGATYFRATRAFMCLAFISSLFGVVLS
GLHIKFMQINYKHLVFNQSITAFCAITGLSIYSSLEEDSIKSTAGYELGW
SYALGWVGVFFTFLSVGIIQIWPHICDCQFQCDCTQVPAQPNVQNDLQPS
LQSASHYGNMPPPYISGKESGEGQVNIAVNADNPEKQNLEGAMA
Run BLAST on NCBI

transcript from alignment at scaffold_374:53347..60019-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00062931 ID=TCONS_00062931|Name=TCONS_00062931|organism=Clytia hemisphaerica|type=transcript|length=6673bp|location=Sequence derived from alignment at scaffold_374:53347..60019- (Clytia hemisphaerica)
CCTAACTAGAAATTGACTCATTCCTGCTTTACGATCGATGGTGCTTTCTG TCGAAAAGGACTACTACTTCAAAGGACAAAATTCTTCAAGGTATTTAGTT TTTATCTAATCTCGAAAGATATTTTCTTGAAATACACCTACAATAAAGGT CATAATATTTTGATAATTTTGGTTATTTTAACGTTTTTCATAATTTAAAG TTCCGGCGAGAAAGTCGATTTTGGGCTATCTCTTTAATTTAATCGAATAT TTCAATTCGGAAGGGGTTGGCAGACTTACAGGCTATATTTTGAGCCTTAT TGGACTATTTTTGAACTTTTGGATCCACAGATCCTAAGGTCCTAAGGCTT AAGTCTCATGTTAAAACTCAAAGTTAAAACTCTACCCTTCAAACCTACTT TAGAGCACTTACAAATCGCTTGTGGTTCAAAAACTTCCCGGTGTATTTCC CTTTTTTCTCAAATATTATGACCTTGATTGTACCTTCTCACAGACCCGGT AGGTTTTTTTAGCCAGTGGGGATGAAAATAACGGGTGGAGATTGATGCTA CCAATATTTTTTATGGCTGGAGATTTCAATTCTTTTGTTTATTTCAAGTC AGAAAATTCAGTGGGGGGTGGGGAAAATAGCATAATCTTTTGCAGTGAGT ACACGTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTCTTAATTTTTCAGACTAC TCTAAATCGACAATATGATACAAAATAAAGAGCACTTAAATTTGACAAAA TTTGGACAATATTTGACTCTCGACTTTTGAAGATCCACCCCTAAATTTGG TTAAAACTGCTTAAAAAGAGGAAAAAATTGTAGTTTCTTGTCATTTTTTT CCAAACTGAGGCTAGGCATGTTCTTAAGATGTTCTTAATTTTTCGACGAA TTTCAGCCTCTTATAAACTAGGTTCTAATAAAAAAAAAAACGTGTATTGC TTTAAGTATTTGATTGTTTTCAGTGAGGACAAAAGTTGAAGGATGATTTT CCACCGGGGGCGATATTAAAAAAATTCCAATGGGAATGGGTCCCAGTGGG TCTGTGATAAGGGGGTGTTGAAATAGAAATTTAGTCCAAAAAATTTTAGC TTTCAAGTGGATTTATTTTATTTTTTTTATAATTATTTATTACCGTCAAC ACCATAGTTTAGCTTTCTCTAAAATTAAGCTATGGAGACAAAATGCAAGA ATTCTATTGCGCATGTCAACCACATTAATTTCCAAAGAATACACGGGTTG CAAAATTATATCGATGCAGTCAGAACATGTGATTACTCGAAAAAGTTCAC GTGATTTTATTCCCATGTTACTTGCTTTGCAACTTACAATTAATTACTTT ATTAGTGTCAATAAATTCGAACCTATCGGGAATATATGTCATGTAACAAA GCACATAGAAATTTCGAGTAAAAGCTTGACTGTTTCTTCAGAATTTAATT TAGCAACCTGTGTATCGAAGATGGGCACATATGCTCATGTAGATTAAATA TTCGATTACAATCCCATGAAAATACACGTTATTTTATAAGAAAATACAAA ATTTTTGAAGCCTTCAGATCTTCTTAACTTTTTGAGTTTTAAGCCTAAAA ATGTTCTTAACATGTTCTTATTTTCACCATTTTTCGAGCTTTTTTGCCCA TTTTGCTAAGAAATCGGGTGTTTTAGAGTCTGTAAAGCGTTAGAATGTTC TTAACTTGTCTATTCACACTTTGGCCATCGAAGCCTTTTTATGTTCTTAT ATAGTTTGTTCTTATAAAAGTACGTGTAAATTCCTGCCAAATTTTTTTTC ACCTTTCAAGGAAGAATTCAGGCAATAAATGATATCTATAAAATTTGATA TTTTTAATCCTAGCTGTCTTCCATATATCAGACACATTTCAAAATTTCGA AAGTTTTAACTATAATAATTAATAAACTGAAAATTGAAAGATGAAGATGA AAAAAACTGAAGATTTTTCTAACTTATTGAAAATTTATGATTTTTAACAC CCGTCTCACAGCTCCGGTATAACTTCTGGGGGGACTGACCTTGACATCCG ACAGGGCATACCACTGTCGATTGGAAAACGAACCCTGTCAGATATGAACG CTTGGTAAATTAGGTAACGGGGGTAGGGGGAGGTTGGTAACCTGTCACAA AACAAAACAAAAAGTCGAATTATTTCCCATTCTCACCCTAAAAATTGGCA AAAATGACTAAAAGTAGACGAAAAATTATTGGCTTTTAAAATGTAAACCT TGAAAGTTGCCCAAAATACTTAAGAGTTGACCATGTCAGATACATATCTT GAAATAATTAACCAACAAGTAAGAAAACAAATGTTGAGATACAGTCTCTA TACATAAGTAGAACTTTTCAATATATTTCAATTTGTTAAAATTAAAATAT ATTGAAACCCCTGTATTTGAGTTATTTTTAGAGCCTACCTTATTGGAACT AATTTTCGCAGGTTTTAATTTTAGCGTTTTTCGCGGTTTTTCGTCAAAAT CGCGAAAATTTGATCCCGCGAACAATTTTGAGAGTTGAAAACCGCGAAAA TTAATTCCCGCAAAATACAATTTTTTCCAATTTTATCGAAAAATTTGAAA AATCCCTAGGAAAATGAAAGAAATTTTTCCAAAAAAGGGCAAAACCGCGA AAATTAAAACCCGCCAAAATTCCAGAATGGAAAAAACCGTGAAGATTAAA ACCCGCGAAGTGCAATTTTTCGGATATTTTTTTTCGACCACGAATATTAG TTCCCGCGAAAATTAGTTCCAATAAGGTAAAAGTGGGACAAGAAACCATC AGCGTCGGCAGCACGTCCCCTTATCCAATCTCTTCTCAGGGCCCAGCAAC GTCACTCATCCCGGGAGCTTTTACTAAAATCCCGATGGGGATAAAAATTC TACTCAGCAGGGATGGTTTTAGAAGTGCAGACTTATTTCAAATGGGATCA AAGCAAAGTCAATTCCCCAGTGAGGCTGAAAATAAAGGGTATTCCTCCCC CAGGGACTAAATTTTGGCTAAGACTTCCAGTGGGGACGGGATCCCATCAG GTCTGTGACACAGGCCTCCAAAAAAGGTGCAAACCGGTAATAGCTTTATA AAAATAATCAATACTTTTGTGACTTTTGATTTTTGAACCAAAAGAGATAA GATAGGAAAAATCATCATTTGAAATTTTTGGATTTAACGCAGGTTAAATC GCGGTTTAAGTGATAAGCACTACAGTATTGGAATGACTAGGTGGCCACCC TCCGCCAACTGAGTCTATTTTACTAATGAGCCACGTGACGTCATGTTCAT AATGGCCATCACAACTCCCTCTTCCTCCCTGCAGTTATGGTTGAAGGTGA TCCTCCCTTATTTATACTAATATTGTATTTATCGGGACAATTTTTCCCCA AGACTTCTTATTCGAGGATTAGATATCTAGGTGATAGTCAAATTAACAGT TAAAATTGAGCTTTAACGTTTCCGAATAAAGTATATATCTAGGAAAAATC TTCTTTTTCATCTTCATGTTCAATTTTTTCAATCAATCTAATCGAAATCA TCCCAGCTGGCACACAACGTTGTTTTAACGTTCACCTAACGTTATATGGA CGTTGTGAACGTTAGATAAACGTTGAAAAAACGTTGTGTGCCAACTGGGA TCTTTTCAACGAGGTACTTTCAACATTAATCTCAAGAGCAATCGAAAAGG AACGGAATATTTTTGGAATAAACTTTAAATTGAATTTCTTTTTATTTACA ATTATAGAATATGGATGGCGGAAAAATTGCTTCACTTATAATTTCACTAT GCGCCTTTCTTTTCATAACAATGAGTATGGCTGGACCTGAGTGGTCGATA AGATACGGTCATAACGATGATAAGGTGGGCTATTCAGGGCTATGGAGAGC ATGCAGCCGAATTTACACAACTATGACAGCTTACACAACTCAATGTAAAT CTATAGATGACGCACCAAGACAACAATTCAAAGGAGCAACCTATTTTAGG GCAACTCGTGCATTTATGTGTTTGGCCTTCATATCAAGTCTGTTTGGTGT TGTATTATCTGGATTGCATATTAAGTTCATGCAAATTAATTATAAGCACT TGGTTTTCAACCAATCCATCACAGCTTTTTGTGCAATAACTGGTCTTTCA ATCTATTCATCATTAGAAGAGGATAGCATAAAATCAACAGCGGGATACGA GTTAGGCTGGTCATATGCGCTTGGTTGGGTCGGAGTATTTTTCACCTTCC TCTCGGTAGGAATCATACAGATATGGCCACATATTTGTGATTGTCAATTC CAGTGTGATTGTACACAAGTTCCGGCACAACCAAATGTACAAAATGATCT GCAACCCAGTCTACAAAGTGCCAGTCATTACGGCAACATGCCACCACCTT ATATCAGTGGAAAAGAATCAGGAGAAGGTCAGGTTAATATCGCGGTTAAT GCTGATAATCCAGAAAAGCAAAATCTTGAAGGCGCCATGGCATAAAAAAG GCCGACAAAATAGTAAGATTGTGTTCAATAGTTCTATTTATACTGAGACA GTTAATTTGTCTGAGACGAGCAATTTAGAAAATGAGAATTATGGAGGAGT GTACTTTCCATTCATGTTTCAATAGATAGGATCTCCTCCAAAGATCACAT TTTATAAATTACTCGTCTCAGACGATTTTTCCGTCTCAGTATAAATGGAA CTAATGTAATACAAAACAGCATGGTACAGCAATTTAATTTAGCTTGTATA GTTACACATCATTTCATTTTTTTGTAAATCTTGAAAAACGCCACTTTAGG CGTACAACATTTCCCAAGCAGAAAGAATGCAAGGAAAAAATCTTTTTCAC GAGCGTTCACGAGCATAAACTTCCACAAATCAAAACTTTCATCGAACATT TTCAAACAAACAAATAGCTTAGAGAGACAAATACTTCTTGAATTAGATTG AGTCTTTTGACTTGAACCTTTTACCAGATTTTCTATTTTGTCAAAAGTTT TTCACAAGCATAAACTTTCGCAAATAGCCCTGGACGAAAGGATTTGCGAA TACATTAACTTTCGGAAAAAGGATAAAACTCGAAAAAATTGCGAAAGTTT CTACTTGCGAAAATTTTCAATCTCGTATCAGGGCCAATTGCACAACTTTT TGATTTTACTGACTGACAATGGTACAATCGTTGGTATCTTTTGTGAGCGC TATCAGTTCTATAAAAAAGAGCAAATAGGCTATTCCACAGTCAAAATGGA TCATGGGTTATCAGGACTGATTGCGCCTAGATAACGGTTTCCCTCTTCAA AAAATTTCAAACTTTGGACCAATAGTAAGTCGTCTTTAGCACGCAGTGGT CCTGATTACCCATTACGCTTTGCGACTGTGAAATGGCCTATTAGGGGACT GGGTTCGACTTTGGAAAGTTTGTACGCCTCCATTGCTCCGAATGTCAACT TTACTATTGAGTTTTCAGAAAGTTTAAGATAACAAATAAAAGAACAATTT TACTTTTAATTTCCCCTGTTACTTTCTCAACCATTTTGATTTATCATATT TGCAGGTTAGTTCTTTTGTTTATACTTTTGCTACCATTTTGCTAGATCCA AACCATTTCTTGTACATATACTATTTTTAAACTATTTCAAGCACATTTAT GATGACATTAATATTTTACCTAACTAAAACGAATCAGACTTCAACACTTA ACTCGGGTGGGGAGGGGGTGTGATATTTAGGCTAATGGAGGGTACGTGTA TGTGCTGCCCTTAAAAGTACCTTTTCAAACTTCCAAAGTCCCACGTAGTG TCAGAAAAATAGAAAAATTTCAGCTTTTTGCTCTTAAAAAGTCCGAAATT TGGTCAAATTAGTCTCAACAAGGGTCGTAAAATTAACAATTTTTTCCCCT TTTTTCTCCTTTTTAATCTCTATAAGGGTTTCGAGGGTCAAAAGTTGGGA GGCACATAAGTACCTGTCAGCTCGCAACCCTAATACCCTCTGGGCACTTA ACATTAAAACATTCATTTTTAGTCTTCCATTCCAGCTATCATTTCCCGAT TCTAGTATGTCTTTATGATGTTTTATCTTTTGTATTGCGTTTTACCCGCC AAGGTCAGGGACATAAATGACCAGTATTTTTCATGAATCATATTCACGAT TCGACTTATAATTAGCCCATACTTTAGCCTTATTTAAATGTACTTATTTA TTAATTTGTATATTTTGCACTGTTATTCGTAATACACCATTTGTATCTTT TTTTTCCGTTTGAATTTTATGATTAAACACTAATTAATCACTTCAGAAAC GCTATGTATATTTATTCGAACACCAATGGCTACAACCCGTGTCTCGATGC CCCGGTGGAACTTTTCTGTCTTAGTGTGAATCCAAATAGGCGATAAAAAA AACGATTTTTGCACCTTCCAATTCAATTTCCAATGAGCATTTCCCAGTGT GAGGTATTTTTCCAGCGGCGAGGATTTTTCGGACAAGTGTGGGCTCAAAA GGGTCTGTGACACGGGGTGTAGG

Coding sequence (CDS) from alignment at scaffold_374:53347..60019-

>TCONS_00062931 ID=TCONS_00062931|Name=TCONS_00062931|organism=Clytia hemisphaerica|type=CDS|length=735bp|location=Sequence derived from alignment at scaffold_374:53347..60019- (Clytia hemisphaerica)
ATGGATGGCGGAAAAATTGCTTCACTTATAATTTCACTATGCGCCTTTCT
TTTCATAACAATGAGTATGGCTGGACCTGAGTGGTCGATAAGATACGGTC
ATAACGATGATAAGGTGGGCTATTCAGGGCTATGGAGAGCATGCAGCCGA
ATTTACACAACTATGACAGCTTACACAACTCAATGTAAATCTATAGATGA
CGCACCAAGACAACAATTCAAAGGAGCAACCTATTTTAGGGCAACTCGTG
CATTTATGTGTTTGGCCTTCATATCAAGTCTGTTTGGTGTTGTATTATCT
GGATTGCATATTAAGTTCATGCAAATTAATTATAAGCACTTGGTTTTCAA
CCAATCCATCACAGCTTTTTGTGCAATAACTGGTCTTTCAATCTATTCAT
CATTAGAAGAGGATAGCATAAAATCAACAGCGGGATACGAGTTAGGCTGG
TCATATGCGCTTGGTTGGGTCGGAGTATTTTTCACCTTCCTCTCGGTAGG
AATCATACAGATATGGCCACATATTTGTGATTGTCAATTCCAGTGTGATT
GTACACAAGTTCCGGCACAACCAAATGTACAAAATGATCTGCAACCCAGT
CTACAAAGTGCCAGTCATTACGGCAACATGCCACCACCTTATATCAGTGG
AAAAGAATCAGGAGAAGGTCAGGTTAATATCGCGGTTAATGCTGATAATC
CAGAAAAGCAAAATCTTGAAGGCGCCATGGCATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_039420XLOC_039420Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00062931-proteinTCONS_00062931-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00062931-exon-scaffold_374-1575043694:59930..60019TCONS_00062931-exon-scaffold_374-1575043694:59930..60019Clytia hemisphaericaexon
TCONS_00062931-exon-scaffold_374-1575043694:53347..56112TCONS_00062931-exon-scaffold_374-1575043694:53347..56112Clytia hemisphaericaexon
TCONS_00062931-exon-scaffold_374-1510915933:59930..60019TCONS_00062931-exon-scaffold_374-1510915933:59930..60019Clytia hemisphaericaexon
TCONS_00062931-exon-scaffold_374-1510915933:53347..56112TCONS_00062931-exon-scaffold_374-1510915933:53347..56112Clytia hemisphaericaexon
TCONS_00062931-exon-scaffold_374-1491911889:59930..60019TCONS_00062931-exon-scaffold_374-1491911889:59930..60019Clytia hemisphaericaexon
TCONS_00062931-exon-scaffold_374-1491911889:53347..56112TCONS_00062931-exon-scaffold_374-1491911889:53347..56112Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_374supercontigscaffold_374:53347..60019 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0281246 0.0397241 0.0938896 0.0616063 0.0959401 0.25197 0.188632 0.107067 0.0239454 0.0773178 0.041989 0.0935936 35.4694 27.7888 0.0160959 0.273597 0.0713679 0.0313885 80.4248 65.9626 0.226187 0.23387 0.0176935 0.0480681 0.0588205 0.118263 0.0247593 0.0416886 0.0454208 0.0929971
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR004031PMP22/EMP/MP20/Claudin
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00062931 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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