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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00062926 ID=TCONS_00062926|Name=TCONS_00062926|organism=Clytia hemisphaerica|type=transcript|length=1337bp
aagttattggtcggttgaaaatgaagcaattccattgggcaaatctgacg
taacggtttacaaaagttgaacttctttcaacattttatttttatcgctt
gaaactttttaatgacgtaatcttttctgtAGGCAAAAACGAACAATcca
gcaattaaagagaatgatcaaggCTTCAGGTAATTTTGGGCTATGGAGAT
CATGTGTATCATCTACATCGTTTCGTAATGGCGTTAGAAAATGCACAGAA
ATTCCAGAGAAGCAGGTTAATCCCAAATTTCAACTAACAAGAGGCTGTAA
TGTGATGGCAACAATTGCGAGTATCGTGGCAGTCATTATGGCTTTCATCA
ATATCACACAAAATGGTAACTCCATAAAAAATGGAGGTATTGGAATGGCT
TGCGCTTCCGGTCTAGGAATTGTAGCAGGAGTGATTTTTACAATATATCT
TGAACATATTAAAgacgaatttcaaaatggttcATTTTTAGTATGGAAGT
ATGGATGGGCATATTTCTTGAATTGGGCAGGTGCTGGAGTTGCCTTATTT
TTGGCTCTTATTTCACTCTATGACAGTCGAACGAAAAAAACAGGACCACC
CGGAGCAATTAGGATGCCAGAAGTAACACCTTAGAATGAGAAAGCTCACA
ATGGCTGTTATTGGGTTCAtcaatagatttttaaaaacGTTGGGATTaca
attcaatttttataaggTGTTTGatcattaaaaaattattttattaaaat
gGTTATGTGCATATACCCCACCTATGTAATTCAATCCAATTTTTCTAGCA
ATGTTTACTGCAAAACATCATCCAATACCAGGGTATAATCACCCAGCCGG
TACACAACGTccaaacaacgtccatttgacattcataaggtccaaataac
gttatttgaacgttaaaacaacgttttgtACCAGCTGGGCAAGGAACTTA
GTGGTTATGTTAGGATTCTGTATAgtaatgattgacagattagcGTGAAT
ATATTAATGACTGGACGTCCATCTTCTATTATTTCTTTGAAGCGAgtttc
gttgccgcctgtatatCCAATTTGCTATAAAAAACctacaatattccgtc
ataattttatttctttgaatcaCTTAGCTAAataggattgatagagcttg
aagattactcgtaattcacaaaagaattattctCGAATTTTTTCATAAGT
TTGCAACGTATTTCgtcaacatttttcaacactgaaatgcagaattttaa
ctgcatgtatacttttgaatcacttttgtcgctccaataattgttttttt
gtgtgACTGGAAAAACATAGTATGCCAAATTTGAGAG Run BLAST on NCBI transcript from alignment at scaffold_374:24967..26441- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00062926 ID=TCONS_00062926|Name=TCONS_00062926|organism=Clytia hemisphaerica|type=transcript|length=1475bp|location=Sequence derived from alignment at scaffold_374:24967..26441- (Clytia hemisphaerica)
AAGTTATTGGTCGGTTGAAAATGAAGCAATTCCATTGGGCAAATCTGACG
TAACGGTTTACAAAAGTTGAACTTCTTTCAACATTTTATTTTTATCGCTT
GAAACTTTTTAATGACGTAATCTTTTCTGTAGGCAAAAACGAACAATCCA
GCAATTAAAGAGAATGATCAAGGGTAAGTGGGTGCCCTCTTACCTCTAGT
ATATAGCAATCGAAAGAGAACCCTTTTATTCACCTCCGACTGAGGACGCA
TACTTTATGCGTTTTGAGATTAAGCTGTCGATTTAATCTTTATCCTTTGA
TTATTAATTAGCTTCAGGTAATTTTGGGCTATGGAGATCATGTGTATCAT
CTACATCGTTTCGTAATGGCGTTAGAAAATGCACAGAAATTCCAGAGAAG
CAGGTTAATCCCAAATTTCAACTAACAAGAGGCTGTAATGTGATGGCAAC
AATTGCGAGTATCGTGGCAGTCATTATGGCTTTCATCAATATCACACAAA
ATGGTAACTCCATAAAAAATGGAGGTATTGGAATGGCTTGCGCTTCCGGT
CTAGGAATTGTAGCAGGAGTGATTTTTACAATATATCTTGAACATATTAA
AGACGAATTTCAAAATGGTTCATTTTTAGTATGGAAGTATGGATGGGCAT
ATTTCTTGAATTGGGCAGGTGCTGGAGTTGCCTTATTTTTGGCTCTTATT
TCACTCTATGACAGTCGAACGAAAAAAACAGGACCACCCGGAGCAATTAG
GATGCCAGAAGTAACACCTTAGAATGAGAAAGCTCACAATGGCTGTTATT
GGGTTCATCAATAGATTTTTAAAAACGTTGGGATTACAATTCAATTTTTA
TAAGGTGTTTGATCATTAAAAAATTATTTTATTAAAATGGTTATGTGCAT
ATACCCCACCTATGTAATTCAATCCAATTTTTCTAGCAATGTTTACTGCA
AAACATCATCCAATACCAGGGTATAATCACCCAGCCGGTACACAACGTCC
AAACAACGTCCATTTGACATTCATAAGGTCCAAATAACGTTATTTGAACG
TTAAAACAACGTTTTGTACCAGCTGGGCAAGGAACTTAGTGGTTATGTTA
GGATTCTGTATAGTAATGATTGACAGATTAGCGTGAATATATTAATGACT
GGACGTCCATCTTCTATTATTTCTTTGAAGCGAGTTTCGTTGCCGCCTGT
ATATCCAATTTGCTATAAAAAACCTACAATATTCCGTCATAATTTTATTT
CTTTGAATCACTTAGCTAAATAGGATTGATAGAGCTTGAAGATTACTCGT
AATTCACAAAAGAATTATTCTCGAATTTTTTCATAAGTTTGCAACGTATT
TCGTCAACATTTTTCAACACTGAAATGCAGAATTTTAACTGCATGTATAC
TTTTGAATCACTTTTGTCGCTCCAATAATTGTTTTTTTGTGTGACTGGAA
AAACATAGTATGCCAAATTTGAGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00062926-exon-scaffold_374-1575043694:26269..26441 | TCONS_00062926-exon-scaffold_374-1575043694:26269..26441 | Clytia hemisphaerica | exon |
| TCONS_00062926-exon-scaffold_374-1575043694:24967..26130 | TCONS_00062926-exon-scaffold_374-1575043694:24967..26130 | Clytia hemisphaerica | exon |
| TCONS_00062926-exon-scaffold_374-1510915933:26269..26441 | TCONS_00062926-exon-scaffold_374-1510915933:26269..26441 | Clytia hemisphaerica | exon |
| TCONS_00062926-exon-scaffold_374-1510915933:24967..26130 | TCONS_00062926-exon-scaffold_374-1510915933:24967..26130 | Clytia hemisphaerica | exon |
| TCONS_00062926-exon-scaffold_374-1491911889:26269..26441 | TCONS_00062926-exon-scaffold_374-1491911889:26269..26441 | Clytia hemisphaerica | exon |
| TCONS_00062926-exon-scaffold_374-1491911889:24967..26130 | TCONS_00062926-exon-scaffold_374-1491911889:24967..26130 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_374 | supercontig | scaffold_374:24967..26441 - |
Blast
The following BLAST results are available for this feature:
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