TCONS_00062925 (transcript) - C. hemisphaerica

Overview
NameTCONS_00062925
Unique NameTCONS_00062925
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1734

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00062925 ID=TCONS_00062925|Name=TCONS_00062925|organism=Clytia hemisphaerica|type=transcript|length=1734bp
gcatGGTAGACTCGCAAAGACGATGATTGAGAATGGagttatgataaaaa
attattgtttgGAATTCCGAAACAATGTAACCGTAAAAGAATGGTTTTAC
TCTCTTGACCACGTGATAGAAGCGAAATCGTATAGCAAGGGGTGTTTGAA
GGATTATCATGTGGTACCGATTATCGATTCCAATCTTTTATTGTTGTATG
TTAATGATCGATGTGATGTTAAAGAGAAATGTACTTGCAGAGAACCGATA
AACGGGGAAAGATTTGGAAATTGTTCGAACGATATCAGCGAAACAAATTG
TGAATGTCCTTGCATACAACCCGTTACTTGTCTCAGTGATCTTCGAATTA
CATCCAATACGCTTGAATGCAATCCAgaagataaaagaaaaacagaTTTC
TCAGGGATATGGTACACAGGTGATGAAACTCAGTTAGATCTTTGTATGGA
TCCCGAATGCAAAACACGttATACTTTGAGCGAATGTAATCGTTTCAAAG
CTGGTTGCAATTGGTGTCATAAATATCCGAACGGAGCGTCTGCGACTGAC
GATAAAAAATATTGTGAATACTCCGACAAACCATGCTTCCCAGATTTAAT
TCCTAAAACAAGCCCTTCACCCCCAAAGAAACCTGGAGATAAAGATGGAC
TTTCCAAAGAAGAACTAGCTGGAATAATAGTTGGCTGTTTGATATTCATT
TTCATTATCTTGGCAATTGTTTACTTTAAACGGAAGAGCATCAATTGTGA
ACCATCAGCAAAATCTGAATCAACAATCGAAACGAATAACAACGCTGTCA
GTAACGCACCAACACTACCTCGACAACAAAAAGCTTTTACCAACTTTGCT
TATGTTGATCAGAATGACCCTGATTCGTTTTCACCGACTGGTGCACCAAA
AACACCGCTCCCACCAGAGGAAGATCCAGTTGCGCAAGTTGACGAGGACC
AATCTAATAATAAAGATGGCAAACTTCCCGATGTTGTTATGAAAAATTCT
AATGACAGTGAATTTGGAGCTTGAATTGAAACCAAATTTCAAGAGTTTCA
AATACAAAACAATATCATCATTAAAATTGAGCATGAACTTTAGTTAAAAG
ATGTGTATACCTCCCTCTACAGATGTGTAGGCTATCTGGATCCACATATC
TTTATAAATCGGAAAATCTTTCCTTTGAGCTGGAACGAGGTCCCGGGGAG
GGGGAATgtacgtgcggcccaaaataAGGCCTTTAAAATTGgaaccttac
agtgcagagaagaTTTATCCAACCAATgcatttgtttgaattttttttac
cattttaaggcaaaatatgATCAAGTTTTTAAATTGTATACCCTTAGAGC
AGTACTGccttagagtgcactttggcaagcttggaaaagggacccttaag
ggCTCCTCGTACGGTCATTTACCTCTAGCGCCCCCCCCCCATCGGAAATG
TGGAGTTAGATCACTTGATGACAACACTGTTAACGAAAAGTAAAACTCAA
GTCGAAAGAATGGATGGTTTGAGAAGCAAAAGGCTGAGAAACTAGGCTCA
AAGACCTTGCAACGTGTAAAAAAGATTTACACTCGATGAATTATAAGCGA
CAGGGCTTAAATCACATCAAATGAAGGGTATGCCtggagggggggggtac
ttaggcaaatggagggtacagtgtgtgccgcccttaagggtacctatttt
ggatttccaaagtcctgctaagggtcggaaaaat
Run BLAST on NCBI

protein sequence of TCONS_00062925-protein

>TCONS_00062925-protein ID=TCONS_00062925-protein|Name=TCONS_00062925-protein|organism=Clytia hemisphaerica|type=polypeptide|length=340bp
HGRLAKTMIENGVMIKNYCLEFRNNVTVKEWFYSLDHVIEAKSYSKGCLK
DYHVVPIIDSNLLLLYVNDRCDVKEKCTCREPINGERFGNCSNDISETNC
ECPCIQPVTCLSDLRITSNTLECNPEDKRKTDFSGIWYTGDETQLDLCMD
PECKTRYTLSECNRFKAGCNWCHKYPNGASATDDKKYCEYSDKPCFPDLI
PKTSPSPPKKPGDKDGLSKEELAGIIVGCLIFIFIILAIVYFKRKSINCE
PSAKSESTIETNNNAVSNAPTLPRQQKAFTNFAYVDQNDPDSFSPTGAPK
TPLPPEEDPVAQVDEDQSNNKDGKLPDVVMKNSNDSEFGA
Run BLAST on NCBI

transcript from alignment at scaffold_374:199..5554-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00062925 ID=TCONS_00062925|Name=TCONS_00062925|organism=Clytia hemisphaerica|type=transcript|length=5356bp|location=Sequence derived from alignment at scaffold_374:199..5554- (Clytia hemisphaerica)
GCATGGTAGACTCGCAAAGACGATGATTGAGAATGGAGTTATGATAAAAA
ATTATTGTTTGGAATTCCGAAACAATGTAACCGTAAAAGAATGGTTTTAC
TCTGTAAGTTTCAAAAACCAACTCAATTAAGAAAATCGTCTACTTAAGTT
TAGCTTTATGATTAAAATATGATTTCTGATTTCTACGTACCGCGCTCTAC
CTAAAGAGATATTGTGAATGTGACGATCTGACCTGGTTGTTCAACCAAAA
CNGTACGTACCGCGCTCTATCTAAAGAGATATTGCGAATGTGACGATCTG
ACCTGGTTGTTCAACCAAAACATTCGAAACTGCGTTTGCCTTTTACTTGG
AAACAAATGTATATTGTTTATGTATTTGATTGACAGTTGATTTTGGTGCG
ACTGTTTGTTTTAGCCAATCACTGTGCGGAAAAGCTCATTTAAAATTATT
CGAAATCTGAATGAAAAAGATCAAATCCGTGCGACAACCTGAGCAGATTA
TCTTACGGAGCGATGGCCTTTAGAGTGAATGCGTGCCATGCGTGGAGTAT
CAGAATCTGCTCGGAGATTAGTTGTAACCTATTTATCACTTTCCTTCCTC
TTTTTCAGCTTGACCACGTGATAGAAGCGAAATCGTATAGCAAGGGGTGT
TTGAAGGATTATCATGTGGTACCGATTATCGATTCCAATCTTTTATTGTT
GTATGTTAATGATCGATGTGATGTTAAAGAGAAATGTACTTGCAGAGAAC
CGATAAACGGGGTAATTGTCAATGTCGAACAAAATACCACATATGTTTTA
GTATGGGAAGCAGTTTGTGATTTACATTCTTTCAAACAACATTCATTTTC
AATTAATTTCCGCCGGGGAAAAATCAATTTTTCGGTTTGACATTTAAAGT
CTAAAACTTGCGGCGATCTCCAAGGACCCTTCAAGAAAGTGGATATTATT
TTCACCACCTACTTAATTTTATGTTATATTTTTCAGGAAAGATTTGGAAA
TTGTTCGAACGATATCAGCGAAACAAATTGTGAATGTCCTTGCATACAAC
CCGTTACTTGTCTCAGTGATCTTCGAATTACGTAAGTAAACGAGTGTTCT
GGTGATATGCCGGACACAAGCTCTCCCGCGCAGTTCGAGTGGCGTTACCA
TCGTAACTGTTTGTCGCGTGCAAAAAACTAGCAGTATCTGGACAGCGCTG
AATGTATTTGAAAAAGGAAGAGTTGCTGCTTTGTAAAGAATATATGCGTT
TTTTTATAAGAATGGTGTTTTTTTTCCGTTTCACAATTGATATTCTTAAC
TTTTTACGAAAAATCATCCTGAAATATTTTTTACGGTATTCTAACGAAAA
TCCAACCATAAATTTACCTTGTATTACACGCCTGAAGCAAAAAATGGCCT
TTTTTAAAAGTATTGAGCCTTACTTCGGGATATTTGGCTATTTACAGTTA
AAAAGCTCTGAAAATGACGATCATGTTGCCGAATTACATGATGGTACTCT
AAAGGTCCCAAATAGTAGGGGGAGGGGGGGGGTCTGAATAAAAGGGGGTC
CGAAATTTTTTCAAAATCTTATGAACGGGGGAAGTTCGAATAAAAGCGGC
TAAAACCAGGCTATTTGCTATTTAGAGCAATTCTTTTTAAGATAATCTAA
CCATGGAAGACGATAGCCTTTAAACCAAAGAGCATAAATACGTTATAATA
TCAGGGGTTGTCAAAGCAAATTTTTCAGAAAACGAGCTCAAATGCAACCC
TTTGAGTTGCTACCATAGTATCAGAGATTGAGTTTTCAAAGAATATACTG
TAATGATTTTGGCCTGTGCTTTTCACGGTATGGAGTTGCTTAAAAAATTG
TGTATTCACATTAAATTTCCTTTTTTAACAGATCCAATACGCTTGAATGC
AATCCAGAAGATAAAAGAAAAACAGATTTCTCAGGGATATGGTACACAGG
TGATGAAACTCAGTTAGATCTTTGTATGGATCCCGAATGCAAAACACGGT
AAGTACAAAGTGCATAGTTTTCTCTTTCCTACAGAAATTTTCACCAATAT
CTAATGGTGATTGAAAAATGAAATTCTGAAAGCTGTTAACGTCGGCCATT
TTCCGATCACAAGCTATTTTCTATGCCTTTAGAAGTAATCTTCTGATATT
TTAACTGGTTATATGGAGCGGAAAAGGGGGTAATAGAAAGATAGTGATAG
TAGCATGAAGGTAGAGCATTCAGCCAGGTCATCCCAAAATGGTACTTGAT
GCATCTCTGCTTGATGCTCATCAACTAAAGAGACGGATCAAGGGTAAGTG
GAAAAATCCATGGAAAGGAGGGGCGTCCTCCCATATCTTAGGGTGGACAG
CTAGACTGTGGTCGCACATTTACTTAAAATATTGACCATTGATAATGGGG
AAAAAAAGAAGTAGCTATTCTAATATTAACAAGAAGCCGAAGCGGCATGA
AGGCCCAGCTGACGTGGCAATAACCAGATGTCGTTCGTATCGGAGCCCCC
CCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
CGGACCCTCAATTCACGCAATCACGCAATTTTTTTTTGAAATTCACACAT
TCATGCAAATTTACCTCGAGTTTCACGCAATAACCCGATTTTTCAGGAAG
TCGGGAAGAATCGGGGAAACATTGAAAAATCGGGAAAACTGCACATGATC
GGTGGAAAAAAGGGAAAATTCACGTATTCACGCACAAAATGGCCCAGAAT
CACGCATTCATGCAATCAAAAAGTGAATTTTCACGTTCACGCAAATTTTT
TCAATTCAAGCATTCACGCATTTTTTTTCCAATTTTCACGCATTCACGCA
ACCGAAAATGCCCATTCACACATTCACACAAACCACTGGGGGGGGGGCGT
ATCGGGTACCTTAAGAGAACCAATATTTGCGGAATCTTATTGTTGCAATT
TTAGGGTTTGAAAGAAAACATCGAGTCTTAGAATCCTAATTAACATTTTC
GGCAGAGATTGAAATACGGAACATTCAAAAATTTAAAAAAGTTCGAAAAT
TGGCTGAATGAAAAAAAAAGAAAAGATACCAGCTGCGCTGGAAGGTCAGA
AATGATAAATGATACGCAATATATGTATATAATAGATTTACTTTATGTTT
TTGTTACTAGTATAAAAGAAAAAATCGGTTTAGATTGATTCACAAACTTC
AAATATTAAATGTTGACCGTCAACGTTCAGAAGTATAGATTTAACGCATA
GCATCATGAAAAAACATTCCAATTCAAATTTACACGTGAGCTGCATTTTA
GTATTCTTTAATGAGTTTACTTGGGAAAATTCTCTGTCAGGTTTGAAAAA
TCCAACCACCGACCGTTTTTAGTTCAGAGCGATAAATCCAAAATTGACCA
TTTTCACGGGTAGCATCATGAAAAAGATTCCAAACTTATTCAAAATTACA
CATGAGCTGCATTTTAGTATCCTTTAATAAGTTACAGCATAACTTTACTT
GAAGAAATTCTCTGCAAGGTTTGAAAAATCCAGCCACCGACCGTTTAGAG
CGATCGATCCAAAATTGACCATTTTCACGGGTAGCATGATGAAAAACTTT
CCAAACTTATTCAAATTTACACATGAACTGCATTTTAGTATCCTTTAATG
ACTTACAACATAAGTTTACGTGGAAAAATTCTCTGTCAAGCTTGAAATAT
AAAACTCCAACATCCAAATGCTCCCTGACCTGACTCCATCTGTCCATCCA
TCTCGAAAACCTTGAAAAATACTTTGCCATAAAGAGAATGAAATTTGACT
TTACTGCCAATTCAATCCAATATAAGAGTAGGTCAAACATCGTGCGGGTA
GGCGAGGCAAAAATTCTAAATCGGCCGCTGGTTTAGCCTGGACTACTGGA
CTTGTTAATTTATTGCGCGCACAGGCCCCGACAAAGCCAAAATCTTTTCG
GTCAGTTGCTTTTTAAAGGCCCACTGGGCCAAAAAGGATTTTATTTCACT
AAAATCCTTTTTAATCATATCAAATTTTTATTTTTTACAGTTATACTTTG
AGCGAATGTAATCGTTTCAAAGCTGGTTGCAATTGGTGTCATAAATATCC
GAACGGAGCGTCTGCGACTGACGATAAAAAATATTGTGAATACTCCGACA
AACCATGCTTCCCAGATTTAATTCCTAAAACAAGCCCTTCACCCCCAAAG
AAACCTGGAGATAAAGATGGACTTTCCAAAGAAGAACTAGCTGGAATAAT
AGTTGGCTGTTTGATATTCATTTTCATTATCTTGGCAATTGTTTACTTTA
AACGGAAGAGCATCAATTGTGAACCATCAGCAAAATCTGAATCAACAATC
GAAACGAATAACAACGCTGTCAGTAACGCACCAACACTACCTCGACAACA
AAAAGCTTTTACCAACTTTGCTTATGTTGATCAGAATGACCCTGATTCGT
TTTCACCGACTGGTGCACCAAAAACACCGCTCCCACCAGAGGAAGATCCA
GTTGCGCAAGTTGACGAGGACCAATCTAATAATAAAGATGGCAAACTTCC
CGATGTTGTTATGAAAAATTCTAATGACAGTGAATTTGGAGCTTGAATTG
AAACCAAATTTCAAGAGTTTCAAATACAAAACAATATCATCATTAAAATT
GAGCATGAACTTTAGTTAAAAGATGTGTATACCTCCCTCTACAGATGTGT
AGGCTATCTGGATCCACATATCTTTATAAATCGGAAAATCTTTCCTTTGA
GCTGGAACGAGGTCCCGGGGAGGGGGAATGTACGTGCGGCCCAAAATAAG
GCCTTTAAAATTGGAACCTTACAGTGCAGAGAAGATTTATCCAACCAATG
CATTTGTTTGAATTTTTTTTACCATTTTAAGGCAAAATATGATCAAGTTT
TTAAATTGTATACCCTTAGAGCAGTACTGCCTTAGAGTGCACTTTGGCAA
GCTTGGAAAAGGGACCCTTAAGGGCTCCTCGTACGGTCATTTACCTCTAG
CGCCCCCCCCCCATCGGAAATGTGGAGTTAGATCACTTGATGACAACACT
GTTAACGAAAAGTAAAACTCAAGTCGAAAGAATGGATGGTTTGAGAAGCA
AAAGGCTGAGAAACTAGGCTCAAAGACCTTGCAACGTGTAAAAAAGATTT
ACACTCGATGAATTATAAGCGACAGGGCTTAAATCACATCAAATGAAGGG
TATGCCTGGAGGGGGGGGGTACTTAGGCAAATGGAGGGTACAGTGTGTGC
CGCCCTTAAGGGTACCTATTTTGGATTTCCAAAGTCCTGCTAAGGGTCGG
AAAAAT

Coding sequence (CDS) from alignment at scaffold_374:199..5554-

>TCONS_00062925 ID=TCONS_00062925|Name=TCONS_00062925|organism=Clytia hemisphaerica|type=CDS|length=5115bp|location=Sequence derived from alignment at scaffold_374:199..5554- (Clytia hemisphaerica)
TTATACTTTGAGCGAATGTAATCGTTTCAAAGCTGGTTGCAATTGGTGTC
ATAAATATCCGAACGGAGCGTCTGCGACTGACGATAAAAAATATTGTGAA
TACTCCGACAAACCATGCTTCCCAGATTTAATTCCTAAAACAAGCCCTTC
ACCCCCAAAGAAACCTGGAGATAAAGATGGACTTTCCAAAGAAGAACTAG
CTGGAATAATAGTTGGCTGTTTGATATTCATTTTCATTATCTTGGCAATT
GTTTACTTTAAACGGAAGAGCATCAATTGTGAACCATCAGCAAAATCTGA
ATCAACAATCGAAACGAATAACAACGCTGTCAGTAACGCACCAACACTAC
CTCGACAACAAAAAGCTTTTACCAACTTTGCTTATGTTGATCAGAATGAC
CCTGATTCGTTTTCACCGACTGGTGCACCAAAAACACCGCTCCCACCAGA
GGAAGATCCAGTTGCGCAAGTTGACGAGGACCAATCTAATAATAAAGATG
GCAAACTTCCCGATGTTGTTATGAAAAATTCTAATGACAGTGAATTTGGA
GCTTGAATCCAATACGCTTGAATGCAATCCAGAAGATAAAAGAAAAACAG
ATTTCTCAGGGATATGGTACACAGGTGATGAAACTCAGTTAGATCTTTGT
ATGGATCCCGAATGCAAAACACGGAAAGATTTGGAAATTGTTCGAACGAT
ATCAGCGAAACAAATTGTGAATGTCCTTGCATACAACCCGTTACTTGTCT
CAGTGATCTTCGAATTACCTTGACCACGTGATAGAAGCGAAATCGTATAG
CAAGGGGTGTTTGAAGGATTATCATGTGGTACCGATTATCGATTCCAATC
TTTTATTGTTGTATGTTAATGATCGATGTGATGTTAAAGAGAAATGTACT
TGCAGAGAACCGATAAACGGGCATGGTAGACTCGCAAAGACGATGATTGA
GAATGGAGTTATGATAAAAAATTATTGTTTGGAATTCCGAAACAATGTAA
CCGTAAAAGAATGGTTTTACTCTTTATACTTTGAGCGAATGTAATCGTTT
CAAAGCTGGTTGCAATTGGTGTCATAAATATCCGAACGGAGCGTCTGCGA
CTGACGATAAAAAATATTGTGAATACTCCGACAAACCATGCTTCCCAGAT
TTAATTCCTAAAACAAGCCCTTCACCCCCAAAGAAACCTGGAGATAAAGA
TGGACTTTCCAAAGAAGAACTAGCTGGAATAATAGTTGGCTGTTTGATAT
TCATTTTCATTATCTTGGCAATTGTTTACTTTAAACGGAAGAGCATCAAT
TGTGAACCATCAGCAAAATCTGAATCAACAATCGAAACGAATAACAACGC
TGTCAGTAACGCACCAACACTACCTCGACAACAAAAAGCTTTTACCAACT
TTGCTTATGTTGATCAGAATGACCCTGATTCGTTTTCACCGACTGGTGCA
CCAAAAACACCGCTCCCACCAGAGGAAGATCCAGTTGCGCAAGTTGACGA
GGACCAATCTAATAATAAAGATGGCAAACTTCCCGATGTTGTTATGAAAA
ATTCTAATGACAGTGAATTTGGAGCTTGAATCCAATACGCTTGAATGCAA
TCCAGAAGATAAAAGAAAAACAGATTTCTCAGGGATATGGTACACAGGTG
ATGAAACTCAGTTAGATCTTTGTATGGATCCCGAATGCAAAACACGGAAA
GATTTGGAAATTGTTCGAACGATATCAGCGAAACAAATTGTGAATGTCCT
TGCATACAACCCGTTACTTGTCTCAGTGATCTTCGAATTACCTTGACCAC
GTGATAGAAGCGAAATCGTATAGCAAGGGGTGTTTGAAGGATTATCATGT
GGTACCGATTATCGATTCCAATCTTTTATTGTTGTATGTTAATGATCGAT
GTGATGTTAAAGAGAAATGTACTTGCAGAGAACCGATAAACGGGCATGGT
AGACTCGCAAAGACGATGATTGAGAATGGAGTTATGATAAAAAATTATTG
TTTGGAATTCCGAAACAATGTAACCGTAAAAGAATGGTTTTACTCTTTAT
ACTTTGAGCGAATGTAATCGTTTCAAAGCTGGTTGCAATTGGTGTCATAA
ATATCCGAACGGAGCGTCTGCGACTGACGATAAAAAATATTGTGAATACT
CCGACAAACCATGCTTCCCAGATTTAATTCCTAAAACAAGCCCTTCACCC
CCAAAGAAACCTGGAGATAAAGATGGACTTTCCAAAGAAGAACTAGCTGG
AATAATAGTTGGCTGTTTGATATTCATTTTCATTATCTTGGCAATTGTTT
ACTTTAAACGGAAGAGCATCAATTGTGAACCATCAGCAAAATCTGAATCA
ACAATCGAAACGAATAACAACGCTGTCAGTAACGCACCAACACTACCTCG
ACAACAAAAAGCTTTTACCAACTTTGCTTATGTTGATCAGAATGACCCTG
ATTCGTTTTCACCGACTGGTGCACCAAAAACACCGCTCCCACCAGAGGAA
GATCCAGTTGCGCAAGTTGACGAGGACCAATCTAATAATAAAGATGGCAA
ACTTCCCGATGTTGTTATGAAAAATTCTAATGACAGTGAATTTGGAGCTT
GAATCCAATACGCTTGAATGCAATCCAGAAGATAAAAGAAAAACAGATTT
CTCAGGGATATGGTACACAGGTGATGAAACTCAGTTAGATCTTTGTATGG
ATCCCGAATGCAAAACACGGAAAGATTTGGAAATTGTTCGAACGATATCA
GCGAAACAAATTGTGAATGTCCTTGCATACAACCCGTTACTTGTCTCAGT
GATCTTCGAATTACCTTGACCACGTGATAGAAGCGAAATCGTATAGCAAG
GGGTGTTTGAAGGATTATCATGTGGTACCGATTATCGATTCCAATCTTTT
ATTGTTGTATGTTAATGATCGATGTGATGTTAAAGAGAAATGTACTTGCA
GAGAACCGATAAACGGGCATGGTAGACTCGCAAAGACGATGATTGAGAAT
GGAGTTATGATAAAAAATTATTGTTTGGAATTCCGAAACAATGTAACCGT
AAAAGAATGGTTTTACTCTTTATACTTTGAGCGAATGTAATCGTTTCAAA
GCTGGTTGCAATTGGTGTCATAAATATCCGAACGGAGCGTCTGCGACTGA
CGATAAAAAATATTGTGAATACTCCGACAAACCATGCTTCCCAGATTTAA
TTCCTAAAACAAGCCCTTCACCCCCAAAGAAACCTGGAGATAAAGATGGA
CTTTCCAAAGAAGAACTAGCTGGAATAATAGTTGGCTGTTTGATATTCAT
TTTCATTATCTTGGCAATTGTTTACTTTAAACGGAAGAGCATCAATTGTG
AACCATCAGCAAAATCTGAATCAACAATCGAAACGAATAACAACGCTGTC
AGTAACGCACCAACACTACCTCGACAACAAAAAGCTTTTACCAACTTTGC
TTATGTTGATCAGAATGACCCTGATTCGTTTTCACCGACTGGTGCACCAA
AAACACCGCTCCCACCAGAGGAAGATCCAGTTGCGCAAGTTGACGAGGAC
CAATCTAATAATAAAGATGGCAAACTTCCCGATGTTGTTATGAAAAATTC
TAATGACAGTGAATTTGGAGCTTGAATCCAATACGCTTGAATGCAATCCA
GAAGATAAAAGAAAAACAGATTTCTCAGGGATATGGTACACAGGTGATGA
AACTCAGTTAGATCTTTGTATGGATCCCGAATGCAAAACACGGAAAGATT
TGGAAATTGTTCGAACGATATCAGCGAAACAAATTGTGAATGTCCTTGCA
TACAACCCGTTACTTGTCTCAGTGATCTTCGAATTACCTTGACCACGTGA
TAGAAGCGAAATCGTATAGCAAGGGGTGTTTGAAGGATTATCATGTGGTA
CCGATTATCGATTCCAATCTTTTATTGTTGTATGTTAATGATCGATGTGA
TGTTAAAGAGAAATGTACTTGCAGAGAACCGATAAACGGGCATGGTAGAC
TCGCAAAGACGATGATTGAGAATGGAGTTATGATAAAAAATTATTGTTTG
GAATTCCGAAACAATGTAACCGTAAAAGAATGGTTTTACTCTTTATACTT
TGAGCGAATGTAATCGTTTCAAAGCTGGTTGCAATTGGTGTCATAAATAT
CCGAACGGAGCGTCTGCGACTGACGATAAAAAATATTGTGAATACTCCGA
CAAACCATGCTTCCCAGATTTAATTCCTAAAACAAGCCCTTCACCCCCAA
AGAAACCTGGAGATAAAGATGGACTTTCCAAAGAAGAACTAGCTGGAATA
ATAGTTGGCTGTTTGATATTCATTTTCATTATCTTGGCAATTGTTTACTT
TAAACGGAAGAGCATCAATTGTGAACCATCAGCAAAATCTGAATCAACAA
TCGAAACGAATAACAACGCTGTCAGTAACGCACCAACACTACCTCGACAA
CAAAAAGCTTTTACCAACTTTGCTTATGTTGATCAGAATGACCCTGATTC
GTTTTCACCGACTGGTGCACCAAAAACACCGCTCCCACCAGAGGAAGATC
CAGTTGCGCAAGTTGACGAGGACCAATCTAATAATAAAGATGGCAAACTT
CCCGATGTTGTTATGAAAAATTCTAATGACAGTGAATTTGGAGCTTGAAT
CCAATACGCTTGAATGCAATCCAGAAGATAAAAGAAAAACAGATTTCTCA
GGGATATGGTACACAGGTGATGAAACTCAGTTAGATCTTTGTATGGATCC
CGAATGCAAAACACGGAAAGATTTGGAAATTGTTCGAACGATATCAGCGA
AACAAATTGTGAATGTCCTTGCATACAACCCGTTACTTGTCTCAGTGATC
TTCGAATTACCTTGACCACGTGATAGAAGCGAAATCGTATAGCAAGGGGT
GTTTGAAGGATTATCATGTGGTACCGATTATCGATTCCAATCTTTTATTG
TTGTATGTTAATGATCGATGTGATGTTAAAGAGAAATGTACTTGCAGAGA
ACCGATAAACGGGCATGGTAGACTCGCAAAGACGATGATTGAGAATGGAG
TTATGATAAAAAATTATTGTTTGGAATTCCGAAACAATGTAACCGTAAAA
GAATGGTTTTACTCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_039415XLOC_039415Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00062925-exon-scaffold_374-1575043694:5452..5554TCONS_00062925-exon-scaffold_374-1575043694:5452..5554Clytia hemisphaericaexon
TCONS_00062925-exon-scaffold_374-1575043694:4794..4946TCONS_00062925-exon-scaffold_374-1575043694:4794..4946Clytia hemisphaericaexon
TCONS_00062925-exon-scaffold_374-1575043694:4474..4568TCONS_00062925-exon-scaffold_374-1575043694:4474..4568Clytia hemisphaericaexon
TCONS_00062925-exon-scaffold_374-1575043694:3557..3673TCONS_00062925-exon-scaffold_374-1575043694:3557..3673Clytia hemisphaericaexon
TCONS_00062925-exon-scaffold_374-1575043694:199..1464TCONS_00062925-exon-scaffold_374-1575043694:199..1464Clytia hemisphaericaexon
TCONS_00062925-exon-scaffold_374-1510915933:5452..5554TCONS_00062925-exon-scaffold_374-1510915933:5452..5554Clytia hemisphaericaexon
TCONS_00062925-exon-scaffold_374-1510915933:4794..4946TCONS_00062925-exon-scaffold_374-1510915933:4794..4946Clytia hemisphaericaexon
TCONS_00062925-exon-scaffold_374-1510915933:4474..4568TCONS_00062925-exon-scaffold_374-1510915933:4474..4568Clytia hemisphaericaexon
TCONS_00062925-exon-scaffold_374-1510915933:3557..3673TCONS_00062925-exon-scaffold_374-1510915933:3557..3673Clytia hemisphaericaexon
TCONS_00062925-exon-scaffold_374-1510915933:199..1464TCONS_00062925-exon-scaffold_374-1510915933:199..1464Clytia hemisphaericaexon
TCONS_00062925-exon-scaffold_374-1491911889:5452..5554TCONS_00062925-exon-scaffold_374-1491911889:5452..5554Clytia hemisphaericaexon
TCONS_00062925-exon-scaffold_374-1491911889:4794..4946TCONS_00062925-exon-scaffold_374-1491911889:4794..4946Clytia hemisphaericaexon
TCONS_00062925-exon-scaffold_374-1491911889:4474..4568TCONS_00062925-exon-scaffold_374-1491911889:4474..4568Clytia hemisphaericaexon
TCONS_00062925-exon-scaffold_374-1491911889:3557..3673TCONS_00062925-exon-scaffold_374-1491911889:3557..3673Clytia hemisphaericaexon
TCONS_00062925-exon-scaffold_374-1491911889:199..1464TCONS_00062925-exon-scaffold_374-1491911889:199..1464Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00062925-proteinTCONS_00062925-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_374supercontigscaffold_374:199..5554 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.1658	0.440126	0.0874172	0.138259	0.282356	0.123957	0.567007	0.706595	1.87793	1.41278	0.657197	0.717701	0.998592	0.73063	0.316546	0.500072	1.64193	1.54861	4.68038	4.76616	9.27248	8.56288	6.5056	9.33195	17.2046	15.222	10.6634	17.1598	0.0516427	0.0861858
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00062925 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top