TCONS_00062908 (transcript) - C. hemisphaerica

Overview
NameTCONS_00062908
Unique NameTCONS_00062908
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length122

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00062908 ID=TCONS_00062908|Name=TCONS_00062908|organism=Clytia hemisphaerica|type=transcript|length=122bp
NNCAATTCTCCAGCTCATCATCATGGCTGTTGTGTTTCGCATTGCTGTGA
AGCAAAGGAAGAACGCGTACTATAGAAATGATCCTAAAAAGTACGGTCTT
GTCCTCTAGAAAGCTGCATAGT
Run BLAST on NCBI

transcript from alignment at scaffold_373:28574..28695

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00062908 ID=TCONS_00062908|Name=TCONS_00062908|organism=Clytia hemisphaerica|type=transcript|length=122bp|location=Sequence derived from alignment at scaffold_373:28574..28695 (Clytia hemisphaerica)
ACTATGCAGCTTTCTAGAGGACAAGACCGTACTTTTTAGGATCATTTCTA
TAGTACGCGTTCTTCCTTTGCTTCACAGCAATGCGAAACACAACAGCCAT
GATGATGAGCTGGAGAATTGNN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_039398XLOC_039398Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00062908-exon-scaffold_373-1491911889:28574..28695TCONS_00062908-exon-scaffold_373-1491911889:28574..28695Clytia hemisphaericaexon
TCONS_00062908-exon-scaffold_373-1510915933:28574..28695TCONS_00062908-exon-scaffold_373-1510915933:28574..28695Clytia hemisphaericaexon
TCONS_00062908-exon-scaffold_373-1575043694:28574..28695TCONS_00062908-exon-scaffold_373-1575043694:28574..28695Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_373supercontigscaffold_373:28574..28695 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00062908 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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