TCONS_00062899 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00062899
Unique Name	TCONS_00062899
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1526

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at scaffold_373:72012..82761-

transcript sequence

>TCONS_00062899 ID=TCONS_00062899|Name=TCONS_00062899|organism=Clytia hemisphaerica|type=transcript|length=1526bp
AAGAAGAGTTCCCAAAGTCCAAGAAACTGATAAGTAAATAATATACAGgt
acaaagaaaataaatcgaTAAGATGTCAAGAAAGTGTTGTCCCTGCTGTT
CAGTCCTTATTGCATCAATTTGCCTGGCAGTTGTTGGAATCTTGATAGCG
TGTCTGAATTTTGGTGCTATGCCATTATATAAAGGTATTGTAAAGAAGAA
ATTGGTGATGAAAAAAGGTTCAATGACCTACAAAAATTGGGAACATGCAC
CACTACCAGTGTACATGAATTATTACATCTTTAATTACACAAATTTGGAG
GAGATTAAGAATGGAAGCAAACCAATTATTAAAGAGCTGGGACCTTATGC
ATACAGGTGGGAATCTATTTTATGCACAAGTNATGATCTTCAAAGAATTG
TTAAATGGAGAGGTTCTGaTGAAGTGCCTCATTGGTTGACAAAATATGGT
CGAATGATCAATGGTACAGATGGAACACACTTCAAACCTTTTGTTACCAA
GTCAGATCAACTTTATGCATTCATCCCTGATATATGCAGGTCTATTTACA
TCGTGTACGACCAAGAAGATTCAGTACAAAATATCGATCTCTACCGATAT
ACAACAGATGAATATTCCATGTTGAACCATACTGCTAACCCTGACAATGA
AGCATTTTGTGTTGGTGGTTGTGGACCATCAGGAATCATTCCAATCGGAC
AGTGCCAAGACGGAGACCCACCAGTTTATGCATCTGGTGTTCACTTTTAT
CAATCTGATCCCGCCTTGTTTGAAGCTGTTGATGGCTTGAGCAATCCTGA
CAAAGAAAAACACGCCACTTTGATCAGCGTTGAACCTGATACTGGTACCA
CAATGAAAGCAAACAAGCGATTGCAAATCAATGTCAAAGCTGAATACGTT
GAATTCTTCCCaaaaacttatggGTTCCCAAAAGGTGATGGTATCTACTT
TCCAGTGTTTTATGTTGATGAAGAGTTCAAATTAGATGAGGCGAATGCGA
AGACGTTTGAAGATGAAGTGACAAACCCTAAGAAGTACATTGTGGTTTTC
CGATGGGTGTTGGTTGGTCTTGGTGGATTCCTCATCTTGCTCGGTGTTAC
AATGTATGTGTGTCATGCCGTTCGCAATAACGACGCCGAAGACGGATATA
AGAAGTTTTCTGGTCGTTGAGGATGCATTGTTCAAATGgatgatttttct
tcttcaaacaGCTCTGAATTCGAGCAATTTGGCCAATCTTTCGGTGGAGA
TCAATTACTCCACAATGAATTATAGTTAGGGCAGATTAGGGGTATGATTG
TATTACAAATCTCATGTTTATCTTaagaattttagaaaaatgtagGAGTT
ATTGTATGATTATTGTTGATATTTGATAGAGTatttttcttatatatttt
gtattttcgagttGATGGAAGTTGTGCTCGATGGCATAAACTTTGGATGC
TCTTTATTGTTACTGGTTAACTTTTCAAGAGCTGGCAAAGGGAAAGGCTT
GCCTTTTCATAAATATGAGAGATCCC

Run BLAST on NCBI

transcript from alignment at scaffold_373:72012..82761-

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00062899 ID=TCONS_00062899|Name=TCONS_00062899|organism=Clytia hemisphaerica|type=transcript|length=10750bp|location=Sequence derived from alignment at scaffold_373:72012..82761- (Clytia hemisphaerica)
AAGAAGAGTTCCCAAAGTCCAAGAAACTGATAAGTAAATAATATACAGGT
ATACGTTATCATGTGTTTTTTTATACAGTAATCATTGAATAAATAAATGC
TGAATAATTTTAAAGAACATGCGTTTTAAGGCTGCAAGAAACTATGACTG
GTAAGAACTCTTAGCAGACTCCAGGCATCAGAAGAATGATGGGAAAAAAC
TGGAGATGTAAAACACATATATGTTACAGTATACTTCCAAAACACAAAAA
TAGTTTTTCATAGCTTTTCATTAGACCTGACCCAATCAATCGAACCTGTT
GCACCAATCGAAACAATCAAACTAATCGAACTCCATCGAAATTAATCATC
AAATTAATCATTAAATGTAGTAAATTCATAAACAACAAAACTAATGATAA
TCCTAATGTAAACCAGGTCAATTTCAAACCGTTGAGTATCCAAAATTTAT
TTAAACTTGAAGCATGTAAACTTGTATATAAATTCTTGAATTGTACATTA
AACAAATCATCTTCAGATTTATTCACTCGTCATCCCCGTCTCCATGACAT
CAACCATCCAGCTAGGAGAGACAGTAGCAACAGTGTGGCTGTAACCCATT
TTGATCAAACTGACTGTTCTGTTATGTACAACGCCCCCTTAGCTTGGCAC
CAGTTTGATTGCTACAAAACCACTAAATTCTCTATTCATACTATGAGTCA
TAATCTAAAAAAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAACGGCTTTGA
AAGCTTAGTATTTATGAGCTAATCGTTCTTAGTTTTTTATTCACTGTACA
TATCTTAAAAACGAGAAGAGACTTATCTTATCTTATCTTATCTTATCTTA
GAACGATTAAAGTTCAATTAAAAAATTCAATCAAACTCTAAAAGATTTTT
TAAAAGATTGTGAGTGTTCGATTAAGTACGATCAATGGGTTTTGGTTCGA
TCAGTTCGATAAACCAATTTTGTTTGACAAGTTTGTACTCTGCTCCGCCA
CCATATATTAGCTTCTTTTCAAAGCCAAATTCGGAATGCAAATCAGGAAA
TTACTTCCGATAACGGATTACACACTTTTCCAGTATCCTTTTAGCGCCAG
AGGTGGTTTGTTGAGGGGGGGAGGGCTGCGTAGCATTCTCCCCCTTTGTC
GCACGCAAAATTGCAAAAGAGGTTCTACAGACTTTATTCTGGATAGACAA
ATATCCGGGTACAATAAACGTCAAGCTGTTAGTTAAGTTTGGGAACTGTC
GAAATGGCAATCGCGTGGCAGGATAAAGTTTTTGCAAGCGAGAGAAGATA
TGAGGATTTAATATCATCAAACTACAATCAAAGTTTTTACTGACGGAACT
AATAGAACTGCTATTGCCTCAAAAATTGTGAGTGTTCGATTAGGTTCGAT
TAATTTTTTTAATCGAACTTTAATCCTTCGATGGAGTTCAATTAGTTCGA
TTGTTCGATTGGTTCAACAAGTTCGATTGATCGGGTCTGGATTAGATTTT
CAGGGATTTCCTCCAGTGTGTTTGACATTATTGAGTGTGGTGTTGGATTC
GGCTTTCAATATAAATGTCAATTGTTATTTATATAATCCATATAATAACT
ACGACTTCTCCAGCTCGATACAATCAATAAGGCCTATAAGTGGCTAAGTA
AAAGGGCCTAAAAGTCCACTAAAAAAAGTTTGTTAAGTTTTTAAAGAGGC
CTACCTAGAGGTCTAGACCTAATCTAATTGAATTGCAAAATGGGCCTATA
AGCAGCTATAAGTCCCTTTGTGGCTTTATTTCCAGGCAATATCAACCAAA
CCCTATTGCTATTGAACTGATTTTCGTAATCGAACCATCGAATTTCATCA
AACAAAATCGATTACTTATCGCAGTTCAATTAAGTTTGATCAGTGTTTTT
GTAGCTCAAATGGTTCCAGTTATGTGCTCCGAGAATGATTTGTGAATAAA
AACTGTAAATCGAACACATCAAACTTATCAATCAAACTAATCGAACTTTA
CCGAAATTTCTCGGTTCAATGACTGTTCGATTTGGTTTGGTAATCGAACA
CCTATCGTTCCATTAAGCTCGATTGAGTTTGATTGGTTGTAATCGAAAAG
TTCGATTGATATCGCCTGGTTATTTTGTTGTGTCATAAGTGAAGGTTTTG
AACTTCAAAAGGCAGAAATTTTTCAAAATTCATGTTTTATTTAACAGCTT
GGTAAAATCTGTGTGTTTCCATTTCTAGAAATTTTGCGCAAGTCATCGAT
GGCGCAAGAAATCAACAAAAGAAACCAATAAAAGATCAAAGAGAAAAGGC
ATAAGTGGGAAAAAGTGATTGTTTGCCAATCTCAAGATTAAGTTGGCGGT
TTTTATGAGTTTTCCTGTGGTATAAATGAAGACTTGCCAGATTGGCAAAC
ATGAAGAAATAGAAGAAACTAAGAATTCATCCCCTGGAAAATATATTTAG
ATTGTTTTATTTTGTTCAATCGCAAACGCTCTTGAAAGCGCCAAATATTT
TATTATCCAATCATAGCGATATCAATTGATTTATTTTATGCAATCAAAAA
ATTGCCGTACCATTGTTAAAAAGAAGTATCCAATCAAATGAAGGTAAAAT
TGGTGCCGTGGTATAGTGGTAGTCGACCTTGGCTTCTGTGCAGGAGGCCA
GGGTTCGATTCCCACTCACGGCAGTTCACTTGGCAAGTGAACGTTCCTTC
GCCCAGGTCAACCCATGCCATGTGAGGGGAATTGGACGTGCTGACGGGAT
GCTCATTAGTAAGCGTCTATAGTTGCCAGAATAGGCCTCTAAAGCCTCCT
GCAACTCAACCAAATAGAAATAGAAATAGAAAACACTTTCATCCAATCAG
AAAGGATTCTTTGAAAAAATAACACTCGCATTAAATTCCCACTTTCGTTT
GCGAACTAAAGATAAGAAAAAAATTCATCCCTTAGAATCAACAATTGAAA
CAAATAAAGTTAAATGACTACTCGTTATCCAAGGTGCTGAAAAGCCATTC
ATCATACACGGCAATCTTATTGGTTGAAATTTAAAAAAGACACTCTAATG
GAGCGAATTATGGAAGCAACTGAGAAGAAGGGACCACTTTCGTTTTTACT
GCAGATTTCGATATAAAAATTGCATAGTTAATACTTCTGTTAATATGTAT
TATGTGTCAACTATGTAAGCATTTTATTGTTGGAATAGAAAAGAGAAGAG
AGGTAAGTCTAGCCTAGCCTAATTGTCAGGGGGTGTAAAAAGAATGTGAG
AGCTTATTTGTATCAAAAGCAAATCACATGGATTTTACCAAGCTGTTTAA
GTCCACTCTGCAAGATTTACTAAGTCTGAAGTTGCACCTGTTACGTACAA
AGATATCTTTTTATTGAAAAAACATCCTCATGGCTTTAAGAAGACATTTA
CTTCAAAGCTTTACAATCAAAAATGGTTTCAGAATCAAGGAAAAACTTTA
ATTGCAATTTTCTCAAAATGACCAAAATGGCCTTAGGCCCCTTTTGAATT
AATAGGGCTCACAGAACTTAGGCCCCTTTTTTTAATTGAGGTAGTGAATT
GATCGACTGACTCTAAAATGATCCATTGATCGCCAATTGATGAAAAAAAC
AAATAGATGATCAATCGATACTCAAGATTTTAGAAGAGGGTTGATATCCA
TTCAATCAATGTATAGCCCTAACTCTCCATTCAAAAATTACGGAAAACTC
ATATTTGGACTTTGTACCCAATGCTCCACACAAGCACTTGAGCTAAAGTC
CTGCAATAGCATTTTTTTTACCCCATTGAAACGCTAAAAAATGCCAATAA
TATAATAATGTCACAACCAAAATCTTTTTGATAATTTTTATAAAGTTGAA
TCTCTTTCACACTTCTAAGTGGTTTTTCAACATTCTTGAGCTCTTCAATT
GGGCTATATGGCTAAAATAGGTAAAACATAAGTAAATATAGCAATTTTAC
CCCCTGAAATGTAAAAAGTGCAAATAAAATATCACAACCTGGAAATTTTT
AATGATTTTAGTGAAGTTCAATCTTTTCCACACTTCTATGAGGTTTTGAA
CCTTTTTGAGCTCTTATGGCGTTATGTGGCTGAAAGAGGTAAAAATAGCA
TTTCTTACGCCCTGAAATGTTAAAAAGTGCCAGTGACAATATAACCTAAA
TTTTTTAACGGTTTCGATAAAGTCCAACATCTCGAAAATCTTTTGTGTCG
GTCATGATGTTCGAATGAAAAGAGAATAAACCATTGACTTGAGAGTTGAA
AATAAATCTCTTATATTCCTGTCTCTTACTTAGCCTATTCTTTTAAAATA
CTCGCTTCCTTTGTAGCTTTCAAGAGTGTTTCTAAAGTTTACTTTAATTT
ACTGCGTTCTTGGTAATTTTATTAACGGTTGTTTCTAAGATTGCTTTTTA
TTGATTTTTTATTGGTTTTCTCCGTAACTTTCAAGAGTGTTTCTAAGATC
ACTTTTATTGATTAGTGTTCTTTATATCTTTCAAGAGTGTTTCTAAGTTA
ACTTTTATCAACTCGCTATCTTTGTAACTTTAAAGGGGTGTTTCTAAGAT
CTATTTTATCAAATCAATTTCTCTGTTACAGTAACGAAAGGTCACTTTTA
TTTTACCTCATAGTGTGCAGAGGGGTCTGAACCCCCCATTAATATTTCAT
CCCCCCCCTATAAAGGTATCCCCCCTATTTTTAAAATTATTTGATCCCGC
ACCATTTACAGGGGTCCGAGCCCCCAGCATATAATTTGTACTCCCAGTAT
TGGGAAGAATTTTGATCTGATTCAAAACAGAGTGCAGTGAGAATAAATCA
GATAAGTCGAAATTATGTGATATTAAATTTTATTGACTTAAATCAACATA
CANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCC
CGCCCCCCCCCCCCCCTTAGAAAAGGGGGGGGTTCATACTATGTAACCTA
CTCGCTTTCTCCATAACTTTCAAGACTGTATAATTTTAGAAAAAATATAC
ACTGAATTTATCGTCAGGATTTTGAGATTTCATTTCTGTTGGACATGATG
TCCGATTGACTAAAAATATTTATTTGCAACCCTGCTGATTGACTATTAAC
AAGCAACATAATCACACAAAATCAACTGTCAATCATATACTCAAACAATT
CATAAAAATTAGAACCCAGGTGCTTTTGCTTTCTTTTTCAAGAAAAATAC
AACACGGTTTTGAATGTTTTAGCTGAACAACCAGACCAGATTATTACATT
CGCTATATCCCTTTAGAGCAGAGCATGGTTTTTGCATAATGGATGGTCTG
TTATGAGATTACATCTACCAAGCCATGTTCAAAATCATCGTTTGTTGGTG
TTTAGGTACAAAGAAAATAAATCGATAAGATGTCAAGAAAGTGTTGTCCC
TGCTGTTCAGTCCTTATTGCATCAATTTGCCTGGCAGTTGTTGGAATCTT
GATAGCGTGTCTGAATTTTGGTGCTATGCCATTATATAAAGGTATTGTAA
AGAAGGTATGATTATTTTTATTTATATTTTGTATCCAAACTTTTTCCTGA
TTATGAATTGATGGTAGTTGTCTTTAAATCAACCTTGATTTTTCTTGGAA
ACTTATTAATTTCAACTTCTAATTGAATTTCTATTNATTATTTTTATTTA
TATTTTGTATCCAAACTTCTTCCTGATTATGAATTGATGGTAGTTGTCTT
TTAATCAACCTTGATTTTTCTTGGAAACTTATTAATTTCAACCTCTAATT
GAATTTCTATCACAGAAATTGGTGATGAAAAAAGGTTCAATGACCTACAA
AAATTGGGAACATGCACCACTACCAGTGTACATGAATTATTACATCTTTA
ATTACACAAATTTGGAGGAGATTAAGAATGGAAGCAAACCAATTATTAAA
GAGCTGGGACCTTATGCATACAGGTGGGAATCTATTTTATGCACAAGTNA
TGATCTTCAAAGAATTGTTAAATGGAGAGGTTCTGAGTAAGTTTTCAATT
TTTTATTTCTCATGCCCTTATCTTATTTCCCATCATCCTTTTCTTCATCC
CTTTTGTATCCTACAAATTTTTAAATTGTTTAAAAACTTTCAAGATTCTT
TTTTTTTTGAAATACTCTTAAAACTGATAGCGCAATCAAAATATAACAAT
TAAAACGAATTTGGAAATGATTCAAAAGTAAAAATATGAAAATAATAAAA
CTGTTAGAAGTGCTGTTCGCACGTATGTCAAAAGCAGAAAGAAGAGAACT
TTGACTGATTACAGGGAAGTGAAATATTATGATCTACGTAACCAAATGAC
TTTAAACATCATATGTAGATCTGTTGTTTTCACGCTAAATGAATTGAAAT
ATGGTATCAAATAATTCCTTACCTGTATGGTTTGAGGGAATTAATCAATT
TCAATAACCTTTAAAAATTGGGGTTTGAATACTAATAGTGTAACAACAAT
AAACACACATACAATTTATGCAAATAATCATTATTGAAATATATGATGTC
ATTCTGTTACAGTGAAGTGCCTCATTGGTTGACAAAATATGGTCGAATGA
TCAATGGTACAGGTAATGAAAATGATATTTGTTTTTAGAAAAACTGTTTC
AATTTTGCTAAAAGGCTCTTATTAAAATTGTCAGTGATATTACTAGGAAA
TGGTAAACTCCAGAAATTTAAACATTTCCTAAATCGCCCTCTAGGAATAT
TACCCCTTGGAGAATTAGTCTCTTTAGAAGGCGTTTTGATATTACTTTAC
TCATTTTTAATTTTTTTTTACTATCTATCATTCTATTGTATTGTCAGATG
GAACACACTTCAAACCTTTTGTTACCAAGTCAGATCAACTTTATGCATTC
ATCCCTGATATATGCAGGTACAACCTTATTTTGACCACAATTCAGATGTG
TAATTTGAATTGAAAAACTAGGAATATTTTGAAGATGTAGTGCTTGGGAC
CATTATCAACTGTGTCTAGGTATGAATGTGACAAGAACAAAAATGTTTCT
CCTCTTCACTTTCACCATGCAAGTAAAAAGCTATTTATTTGGCATTTTTT
TAGGTCTATTTACATCGTGTACGACCAAGAAGATTCAGTACAAAATATCG
ATCTCTACCGATATACAACAGATGAATATTCCATGTTGAACCATACTGCT
AACCCTGACAATGAAGCATTTTGTGTTGGTGGTTGTGGACCATCAGGAAT
CATTCCAATCGGACAGTGCCAAGACGGAGGTATAATGAAAATTTGAACAC
TCTTCTATCATCTTTGTTTGTGTCTATTATTATTATAGGGCAAACGAATT
TTTTACCTTCAAAACGATGGAGATCCACTTTCCTCATTTACTTTTTTTAT
GTTTCCAGACCCACCAGTTTATGCATCTGGTGTTCACTTTTATCAATCTG
ATCCCGCCTTGTTTGAAGCTGTTGATGGCTTGAGCAATCCTGACAAAGAA
AAACACGCCACTTTGATCAGCGTTGAACCTGTAAGACTTTTATTACAAGT
TACGCAGATCTAGAAAACTCCCTAAAACTTAGTAAGACTTTTTATTCTCA
CTCACAGGATTTTTCTCTCTGCAAGACCTTTTTTGGCAAGGTGAATTGGT
ATAGAAATGCCAATTTCAAATCGATTGTTTTTATAGTTGATGATAAACTC
NTTTTTTGGCAAGGTGAATTGGTATAGAAATGCCAATTTCAAATCGATTG
GTTTTATAGTTGATGATAAACTCAATATTTATATCTAACCCATCAGGATA
CTGGTACCACAATGAAAGCAAACAAGCGATTGCAAATCAATGTCAAAGCT
GAATACGTTGAATTCTTCCCGTGAGTTTGTTTTGATACCAACTTTCCTAT
CTTCATAGAAAAATCCAAAACATCTATCACTGAACTCACATATTATTTTC
TTTTGTTTTCAGAAAAACTTATGGGTTCCCAAAAGGTGATGGTATCTACT
TTCCAGTGTTTTATGTTGATGAAGTAAGTCAATCTTGTAATTTAATGTTT
AATTCAATTTTTTTGGCCATGAGTTTAAACAACAAAGAAATAATTATTTT
AACTATTTTCGCTTGAAAACTTAGGAGTTCAAATTAGATGAGGCGAATGC
GAAGACGTTTGAAGATGAAGTGACAAACCCTAAGAAGTACATTGTGGTTT
TCCGATGGGTGTTGGTTGGTCTTGGTGGATTCCTCATCTTGCTCGGTGTT
ACAATGTATGTGTGTCATGCCGTTCGCAATAACGACGCCGAAGACGGATA
TAAGAAGGTCAGTGTGTGATTCTCTCCATTACAGATTCGATTGAACTTTC
TAATAAAGTCTCTTTTTTATTAAGTTTTTCTAAAACAACTTCTGTTACTT
AATTTGAAGTCACAAATATATTGGAAGATAGATTTCTTGGATATGTGCTC
TTGATAAATTTCTTCAATAATTTCGTTCCTTGTTTTAGTTTTCTGGTCGT
TGAGGATGCATTGTTCAAATGGATGATTTTTCTTCTTCAAACAGCTCTGA
ATTCGAGCAATTTGGCCAATCTTTCGGTGGAGATCAATTACTCCACAATG
AATTATAGTTAGGGCAGATTAGGGGTATGATTGTATTACAAATCTCATGT
TTATCTTAAGAATTTTAGAAAAATGTAGGAGTTATTGTATGATTANTTAT
AGGGCAAACGAATTTTTTACCTTCAAAACGATGGAGATCCACTTTCCTCA
TTTACTTTTTTTATGTTTCCAGACCCACCAGTTTATGCATCTGGTGTTCA
CTTTTATCAATCTGATCCCGCCTTGTTTGAAGCTGTTGATGGCTTGAGCA
ATCCTGACAAAGAAAAACACGCCACTTTGATCAGCGTTGAACCTGTAAGA
CTTTTATTAGAAGTTACGCAGATCTAGAAAACTCCCTAAAACTTAGTAAG
ACTTTTTATTCTCACTCACAGGATTTTTCTCTCTGCAAGACCTTTTTTGG
CAAGGTGAATTGGTATAGAAATGCCAATTTCAAATCGATTGGTTTTATAG
TTGATGATAAACTCAATATTTATATCTAACCCATCAGGATACTGGTACCA
CAATGAAAGCAAACAAGCGATTGCAAATCAATGTCAAAGCTGAATACGTT
GAATTCTTCCCGTGAGTTTGCTTTGATACCAACTTTCCTATCTTCATAGA
AAAATCCAAAACATCTATCACTGAACTCACATATTATTTTCTTTTGTTTT
CAGAAAAACTTATGGGTTCCCAAAAGGTGATGGTATCTACTTTCCAGTGT
TTTATGTTGATGAAGTAAGTCAATCTTGTAATTTAATGTTTAATTCCATT
TTTTTGGCCATGAGTTTAAACAACAAAGAAATAATTATTTTAACTATTTT
CGCTTGAAAATTTAGGAGTTCAAATTAGATGAGGCGAATGCGAAGACGTT
TGAAGATGAAGTGACAAACCCTAAGAAGTACATTGTGGTTTTCCGATGGG
TGTTGGTTGGTCTTGGTGGATTCCTCATCTTGCTCGGTGTTACAATGTAT
GTGTGTCATGCCGTTCGCAATAACGACGCCGAAGACGGATATAAGAAGGT
CAGTGTGTGATTCTCTCCATTACAGATTCGATTGAACTTTCTAATAAAGT
CTCTTTTTTATTAAGTTTTTCTAAAACAACTTCTGTTACTTAATTTGAAG
TCACAAATATATTGGAAGATAGATTTCTTGGATATGTGCTCTTGATAAAT
TTCTTCAATAATTTCGTTCCTTGTTTTAGTTTTCTGGTCGTTGAGGATGC
ATTGTTCAAATGGATGATTTTTCTTCTTCAAACAGCTCTGAATTCGAGCA
ATTTGGCCAATCTTTCGGTGGAGATCAATTACTCCACAATGAATTATAGT
TAGGGCAGATTAGGGGTATGATTGTATTACAAATCTCATGTTTATCTTAA
GAATTTTAGAAAAATGTAGGAGTTATTGTATGATTATTGTTGATATTTGA
TAGAGTATTTTTCTTATATATTTTGTATTTTCGAGTTGATGGAAGTTGTG
CTCGATGGCATAAACTTTGGATGCTCTTTATTGTTACTGGTTAACTTTTC
AAGAGCTGGCAAAGGGAAAGGCTTGCCTTTTCATAAATATGAGAGATCCC

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_039392	XLOC_039392	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_373	supercontig	scaffold_373:72012..82761 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	3.67261e-05	0	0	0	0	0	0	0	0	0	0	0	1.87084e-06	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

Blast

[Close]

BLAST of TCONS_00062899 vs. Swiss-Prot (Human)
Match: SCRB2 (Lysosome membrane protein 2 OS=Homo sapiens GN=SCARB2 PE=1 SV=2)

HSP 1 Score: 124.79 bits (312), Expect = 6.109e-31
Identity = 71/215 (33.02%), Postives = 110/215 (51.16%), Query Frame = 1

Query:  385 DLQRIVKWRGSDEVPHWLTKYGRMINGTDGTHFKPFVTKSDQLYAFIPDICRSIYIVYDQEDSVQNIDLYRYTTDEYSMLNHTANPDNEAFCV-XXXXXXXXXXXXXXXDGDPPVYASGVHFYQSDPALFEAVDGLSNPDKEKHATLISVEPDTGTTMKANKRLQINVKAEYVEFFPKTYGFPKGD--GIYFPVFYVDEEFKLDEANAKTFEDEV 1020
            +  +IV+W G   +  W+T    MINGTDG  F P +TK + LY F  D CRS+YI +   +SVQ +  +RY      + N +   DN  FC+  G      +          P+  S  HFYQ+D     A++G+ +P++E H T + + P TG  +KA KR QIN+  + ++ F +T     GD   + FPV Y++E   +D+  A   +  +
Sbjct:  224 NFTKIVEWNGKTSLDWWITDKCNMINGTDGDSFHPLITKDEVLYVFPSDFCRSVYITFSDYESVQGLPAFRYKVPAEILANTS---DNAGFCIPEGNCLGSGVLNVSICKNGAPIIMSFPHFYQADERFVSAIEGM-HPNQEDHETFVDINPLTGIILKAAKRFQINIYVKKLDDFVET-----GDIRTMVFPVMYLNESVHIDKETASRLKSMI 429

The following BLAST results are available for this feature:

BLAST of TCONS_00062899 vs. Swiss-Prot (Human)

BLAST of TCONS_00062899 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
SCRB2	6.109e-31	33.02	Lysosome membrane protein 2 OS=Homo sapiens GN=SCA...	[more]

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TCONS_00062899 (transcript) - C. hemisphaerica