TCONS_00062842 (transcript) - C. hemisphaerica

Overview
NameTCONS_00062842
Unique NameTCONS_00062842
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length6392

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00062842 ID=TCONS_00062842|Name=TCONS_00062842|organism=Clytia hemisphaerica|type=transcript|length=6392bp
NACATACAGTACACAGTAACATGGTGGGTCGACCAAAAATAGtgcaaact
ggggaggcaatttttCTGCGATTCTAATTCTAAAATTCACAACCCATAGC
TATATccttttaaaagtaaaatatattgtagaaATTATAGGAGCACAGAA
ATTGTTGAATGTTGAATTGTTGAtgcaatcgatcacaatcctaatataaa
gcactacaaggaagcccctcttgatttttttcatgtccgctatttttctt
tttgagacgcttttgttgggaggtcgtcagtagtccgacactttctagtc
cgagagtaaaaatgtccgacgttggatttgacgaatgcgtcagtattccg
acaacaattttgtccgacaacgagtaaaaaaaaacatataaaaaacgaaa
tatgaatcgcggaagaggaggcacatcttttatttgaaaatccaGAGTCC
CGATTTTGAGGTTAGGCCCCTgaacccgacttttcttaaattttggccCC
Tgaacccgacttttcttaaattttgggaagcttgttaggattaggctttt
aagagtcaagaaattggatttggctgttttacgacccttctttaTTGATT
TACAACCCTGGTCGGTCTTTTATTTCTAATTACCTAATTACCTATTCCTA
ATGCCgccaaaatgaaattttattaaaatattatctcagtgaaaaaccct
tattcaacattcgacactctaaaatctttcgttttcggacaaaagtgacg
tcggaaaaaaagacttgcaaattctaaatttattttatagattcgaacta
ttttactgtcggactagaaagtgtcggactagtgacatgcaccccttttg
ttcagaagacagattcttacttctgattggttcttatggattgttagaat
tgtgattgattccaccggtggatttttctgaaaatcaccatTATGGTCAC
CatttttgtgctctttccaaTGGGAGCAACCAAATTATGCGCAGTTTCTT
CGTTCAaattaggagacgtgaacctcctgattaggagacgggtctcctaa
tcaggaggcgtctcctaataaggcgactgttcctgactgaCGGACGACGT
GCATTCTAAAATTTTTTCTAGctttggaaataatttttcttttccagtgg
tggtcgcaaattctgataaaaatccatgtatatacttttgcaaaatgcat
cggaaattccactcttttttgccttttttaattcaattgccttggaaatt
tcgaattttggtgaatttttggtggcaatcacaaatatcttcatttcccg
tcctcgttgggtctataAAGTGAGTCCGATCGGTCGTAAAAGTTTCTGGG
CTTCTTCTTCTCGTCCGAcctccatcatccattttttgagtatattCTTG
aagccagccagccagcagccaaaacaaccgcttgttatgggtggtttcaa
attatgacctttgaacaatGTGACCCAAACTGGCACActtaatgataaac
aaagtcaaaataccgcgaatgcgctagaaatcgcttgcaaaaaatcagca
ataataaaatttttgaacgaagaaAACGTCATCGACAAAAAAGTCTGACA
ATAAATTTACTAAATCACcgactcaattttcgagagttgGTAGGGCAACg
caaaacaaagatatttgtgattgccgccttaaaAGGAGCTCTACCGTTTC
TCTGCAGGGTTTCCTCATGAGAACCAGATTATTCAAAGGCCTGATTGTCC
CAAAAGatcgttttggcaaaaacgtcCTAATGCcctaaaaatcagatttt
ttgaaaaaaggagaaaaaaaacatccagatattcacctaaggaacaagtg
tgccaaatttcagccaaatccgccAATTTTTCAAGTCTCCAGgttgcccc
aaaattttagccttgttttggtgaaaaactcgatCCCAGgccctaaaatt
caaaatttttgaaaatgagaaaaaacaccCTCAGATATTCACGCAAGGAA
CAAGTgagccaaatttcagccaaaactgacaatttttgaagtctccaggc
tgccccaaagttttaaaaCATGCACACAGATgtattctcagattctagct
caactgaagaaCTATATTGTGTACCCCCCTCccctattttagtgaaattt
cgaaCCCATGCCATTTACAGCAGCAGTCCACTGGtcattcaaaaccaaaa
acattgaaatttgtgtttaaaattatatgaaaaaaagaGTTCAACATGGT
GCGACAGGCAAAAATTTAGCTATCTACACTTGTTTCTAAGTTGTCCCACA
CCAAATATCAATTTCAATATAAAATATGATTGATATTTTGAACAAAAGTT
GTTATCCCCCTATTTTTACTTGATCCCCCATAAAATCTCAAAACCCCCCA
AACTTGGTCTGAAAGAATGTCTTGCAATATTTAGGCCCAAACATGACCAG
GCAGTTTTGTGGGTCATTGCTGGAGGGGACTGGCCCTACCCTACCCCTGT
CATCTTGCAACTAATCCTAATGCACAACCTATGCTACATTTAATTTACTA
AAAAAGACCAATTAATTAAGGAAGTATGTTCCGCTTTCAAAAAAACATAC
AATGGTATTTCTCACTAACCCACCTGGGATGGAAATTTGAAGATTTCAAC
CCCTGAAAGtaaatcttgttaaaaaagGGCCAGAAAACAAGTAATGCTGT
ACTTAAAAGAAAATGTTGGTTTGCTGTCAAGGGTTCAAAGAAATTCTGGA
ATTTCCAAGGGGTAAACCCTCATTTTACTGGTAATAAAGTAGAATTATCC
GGGACCAATAGAATTCCTTTTCCAGGGCGCAGGGGATTATtgcaaaattt
gccatttttccTGGAGGTATCCACACAATTCAAAATATGTTGATTGTTTT
TGAAAAGGTTTGCTTGCCCCTATATGGATATCTATAATGGAGCAGCCTAC
AGcttctaaacttttttgaatGTTAAAAATTGCGTTTATTAATGGGTTAA
AGAGGTATTGATTTATTAAGACCACTGTTCCTTACATTTCCAGTAACATT
AAGTTAAgcataaaaattgaatatacaaGGACAAGAATAGATACAAAGAT
GAAAGAAATGGAGAATAACAATGAAACACAAATTGAGGAAAAGAGTGCTG
ATAATAATGCCTGGGATAAAGCTCAAAATGCATTGAAAGATTTGCAAGCT
AATAAGAATAAACCAAAACATAATGGTATGAATGGTGGTTATGCAAACCC
TTATTCAAACGGAATGATTGGGAATGGATACCCACCATACAATAATTTTA
ATCCTCACTTTAATGGTCCACCACCTGGTAGCTATTATAATCAACCACCA
CCTGGACCGTACCAAAGaatgCCTTATAATCCTAGCTACCAAGGttatca
aaataattacatGCCTCAGTATGGAAATCATGGTCCTTACAATGGTCGCC
CACGATTCAATGGACCACCTCCTGCTAATTACATTAACAATAACATTCAA
GGTGGTTATTATGGTGCTCCTATAAATCAACAAAATGGAGGACCTCCGCT
TAAAAACATTCAGAACCAAAATAACATGAAAGACAAATCAAAACAAgaag
aatttaaagaaaaagtcATCGAAAAACCAAAATCTTTTGCAGATGCTCTC
AAACATAACAAGATGTGGAAACAAAAGTctACAATGaatttcaaacaatc
aaatgaTATGAACCCTCAAAATAAAGGATGGGCATCTGGGGGATTCCTCA
AGGTTGGAGAAAAACCCAATGACGGAGAACCTGATGCTAATACAAATGTT
GAAAAACGTGAAAGAGAAGACTTGAAAAATGGTGATCAAAACACAGATGA
GCCTAAAGCAAAGCACACCAAGCCCACAACTCCTTTAAAAAGCGAGAACA
ATAAAAAGAAGGAATGGCCTGAAGCAATGAAAACATGGGTCAGAGAATCA
TTTGAGCAGTGTGGTAGTGAACGAATTAAGGATAAAATGGAAGAGAAATT
GAAAACCTttgtaaatcaagttatcaGTGATGGTAGTGCATGGACTATCA
ACTGGCAGTTAAAGGCTCTTTTCAAAACTCCACCAAAAGGATACGAACGT
AGCTCAAGAAGTTCATATCGTAACACTGGCAGTCGGTCGCGCTCCAGAAG
TCGTTCGAGGAGTAATACACCTACTCGTAGACCGTCCCATAGGCGCTCTT
CAAGTAGTGGTGGCTCCTCTAACGACAGTCTGGAGAACGTTCGACCTGCA
TTCAGTAAGAAAATGAAGAACAGACTTGGtaagaaaatgatcaaaaattc
CAATAACAACATCATGGCCAAAAGCAAAAGTACACCTAACATGAAACAAT
TTAAGATTGAAAACGATACAGAGGTTACACAGAAGAAACAAGATCGAGCT
GCACGATTTCAGAAAGACTTCAAGAAGTCTTCGAGCTTCAATTCGTCCAA
TTTAATACCGAAAGGAGAATCACCAATGGATGAAGATGTCGACATGAACT
TTCACATCAACGGATACTGCCAAGATTTGACAAAACCATATTTACGTTTA
ACTTCGGCGCCTGATCCATCGACAGTCCGTCCCGTCAACATTTTGAAGAA
GTCATTGGAACACGTCGAAACGCAATGGAAGAAGAAGAACGACTACCATT
TCGCTTGCGAACAGATGAAGTCCATCCGTCAAGATTTGACCGTCCAAGGA
ATTGAAAACGAATTCACAGTTACAGTATATGAAACCCACGCTAGAATTGC
TCTCGAAAAAGGTGATCGAGAGGAATTCAATCAATGCCAAACGTGTTTAC
GTAGGCTTTACAGCAAAGGAATCAACGGTCAAGTAGCCGAGTTTACGGCC
TACAGTATTCTCTACTATATTTACACAAAAAGCACTTTGGACTTAAATTC
TTGTCTTGCCTCACTGACCAAAGATCTGAAGAAAGACGCGCTTGTTCAAC
ACGCCCTGTCGGTGCGCTCTGCATTGGCACTAGATAATTATCgttcattt
ttcaagttttatttacaAGCACCAAAAATGGGTGGATCTCTCATTGACCT
TTTTATAGCTAGGGAACGTAAAGAAGCACTCAAACGGCTAGTGAAGGCGT
ATCGGCCAAGTTTAAGTGTCGCACATATAACAACCCAATTAGCCTTCAAA
TCTGAAGACGAATGCCTCGCTTGGCTTCAAGAATTGAATATCACATTCCT
TGCTAACGACCCCACTAAAGTTGATTGTAAAGCATCTGTTGTTACATAAG
GGAGAGAGCATACAGCTCGTTCGAGTTTTTTCATGGCTGTGAAAGTTGGT
TGAGTGCCTCATCCAATGAAAAGCAAAGGAGGAAAGAAGCCTGATTTTCA
TGTCAAGGTCCTCTCATTTTACCAAGAAGGTTTTATTCGCACCCCCTACA
CGGTAGTAGTAGTTCAGTCACTACACAAAAAGAGACTaagctttaaaaaa
tgaaaaataaggtCCTGTTCATAGATCCTGCCCTATATCTTATCCTGTTC
GCTGTGCTGTCACTATGTCAATTCATCCTACATGGTGTTTCTACCTACCC
TTTAATTCAGTTAAATTTACAGCATTTTCAACACGTAGCACGCATTATAT
ATGGTATCCCTTATGAACTATATTATGAAAGTCACGGTAGGTTGGTGGTT
CTTAATAAATGAACAGTAAATGGTTATTTCCTTGAAATTGAAAGGTTTGT
AAGTCTCAATAAACCGAGTGCTATTGGAGCAGATTCAGACATTTCAAGTA
TTACAATATTAACATTGCATTTTACGGCAAGAAGAAATTGTTACGACTGC
TCTATGCAGCATGTCACAATGAAAGATATACAACAAACATGATTGGATAC
GATTTTGACAGTGCTTATATGCTTGTCAAATCGTACACAGAGCAAATAGA
CTGATACTAGCTAGAGTTAGCTCTGTTTTGATGTCTTGGATTACCTAAGG
AAAAACAATTCATGgagaaattttgatgaaaatactCTGATTTCGTTTTG
TTTTatgattaattttttcactagaTGTAGGCGGTATTGTTGCTTATATT
TTATGAATTGTATTCATATGACATGACGACTTAAACCCTGGACCCTGTTC
CCTTATCCTTTTCCCCTGATCTTTTATAATGTCAATTTCAGTTTTGAATC
TTTGTTATCGATTAGATGCTTGATTTGCACCCTGTTACGCCAGTTCCCCA
CTCTGACAAAGACGATTACGAAATTGCAATTCCATTATTGTCTCTGCAGT
CTTCTTTTAGAGTTAGTTAGAATTCAGTGACaatctttttgtatttattt
tgtacAAATTGTATATATGATTTATGAAATTATTATTCTTTTTTCTTACT
AAAAGATTCAGATCTACGATTCGAAGAAATCGAACTCTCAat
Run BLAST on NCBI

transcript from alignment at scaffold_372:306681..319794-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00062842 ID=TCONS_00062842|Name=TCONS_00062842|organism=Clytia hemisphaerica|type=transcript|length=13114bp|location=Sequence derived from alignment at scaffold_372:306681..319794- (Clytia hemisphaerica)
NACATACAGTACACAGTAACATGGTGGGTCGACCAAAAATAGTGCAAACT
GGGGAGGCAATTTTTCTGCGATTCTAATTCTAAAATTCACAACCCATAGC
TATATCCTTTTAAAAGTAAAATATATTGTAGAAATTATAGGAGCACAGAA
ATTGTTGAATGTTGAATTGTTGATGCAATCGATCACAATCCTAATATAAA
GCACTACAAGGAAGCCCCTCTTGATTTTTTTCATGTCCGCTATTTTTCTT
TTTGAGACGCTTTTGTTGGGAGGTCGTCAGTAGTCCGACACTTTCTAGTC
CGAGAGTAAAAATGTCCGACGTTGGATTTGACGAATGCGTCAGTATTCCG
ACAACAATTTTGTCCGACAACGAGTAAAAAAAAACATATAAAAAACGAAA
TATGAATCGCGGAAGAGGAGGCACATCTTTTATTTGAAAATCCAGAGTCC
CGATTTTGAGGTTAGGCCCCTGAACCCGACTTTTCTTAAATTTTGGCCCC
TGAACCCGACTTTTCTTAAATTTTGGGAAGCTTGTTAGGATTAGGCTTTT
AAGAGTCAAGAAATTGGATTTGGCTGTTTTACGACCCTTCTTTATTGATT
TACAACCCTGGTCGGTCTTTTATTTCTAATTACCTAATTACCTATTCCTA
ATGCCGCCAAAATGAAATTTTATTAAAATATTATCTCAGTGAAAAACCCT
TATTCAACATTCGACACTCTAAAATCTTTCGTTTTCGGACAAAAGTGACG
TCGGAAAAAAAGACTTGCAAATTCTAAATTTATTTTATAGATTCGAACTA
TTTTACTGTCGGACTAGAAAGTGTCGGACTAGTGACATGCACCCCTTTTG
TTCAGAAGACAGATTCTTACTTCTGATTGGTTCTTATGGATTGTTAGAAT
TGTGATTGATTCCACCGGTGGATTTTTCTGAAAATCACCATTATGGTCAC
CATTTTTGTGCTCTTTCCAATGGGAGCAACCAAATTATGCGCAGTTTCTT
CGTTCAAATTAGGAGACGTGAACCTCCTGATTAGGAGACGGGTCTCCTAA
TCAGGAGGCGTCTCCTAATAAGGCGACTGTTCCTGACTGACGGACGACGT
GCATTCTAAAATTTTTTCTAGCTTTGGAAATAATTTTTCTTTTCCAGTGG
TGGTCGCAAATTCTGATAAAAATCCATGTATATACTTTTGCAAAATGCAT
CGGAAATTCCACTCTTTTTTGCCTTTTTTAATTCAATTGCCTTGGAAATT
TCGAATTTTGGTGAATTTTTGGTGGCAATCACAAATATCTTCATTTCCCG
TCCTCGTTGGGTCTATAAAGTGAGTCCGATCGGTCGTAAAAGTTTCTGGG
CTTCTTCTTCTCGTCCGACCTCCATCATCCATTTTTTGAGTATATTCTTG
AAGCCAGCCAGCCAGCAGCCAAAACAACCGCTTGTTATGGGTGGTTTCAA
ATTATGACCTTTGAACAATGTGACCCAAACTGGCACACTTAATGATAAAC
AAAGTCAAAATACCGCGAATGCGCTAGAAATCGCTTGCAAAAAATCAGCA
ATAATAAAATTTTTGAACGAAGAAAACGTCATCGACAAAAAAGTCTGACA
ATAAATTTACTAAATCACCGACTCAATTTTCGAGAGTTGGTAGGGCAACG
CAAAACAAAGATATTTGTGATTGCCGCCTTAAAAGGAGCTCTACCGTTTC
TCTGCAGGGTTTCCTCATGAGAACCAGATTATTCAAAGGCCTGATTGTCC
CAAAAGATCGTTTTGGCAAAAACGTCCTAATGCCCTAAAAATCAGATTTT
TTGAAAAAAGGAGAAAAAAAACATCCAGATATTCACCTAAGGAACAAGTG
TGCCAAATTTCAGCCAAATCCGCCAATTTTTCAAGTCTCCAGGTTGCCCC
AAAATTTTAGCCTTGTTTTGGTGAAAAACTCGATCCCAGGCCCTAAAATT
CAAAATTTTTGAAAATGAGAAAAAACACCCTCAGATATTCACGCAAGGAA
CAAGTGAGCCAAATTTCAGCCAAAACTGACAATTTTTGAAGTCTCCAGGC
TGCCCCAAAGTTTTAAAACATGCACACAGATGTATTCTCAGATTCTAGCT
CAACTGAAGAACTATATTGTGTACCCCCCTCCCCTATTTTAGTGAAATTT
CGAACCCATGCCATTTACAGCAGCAGTCCACTGGTCATTCAAAACCAAAA
ACATTGAAATTTGTGTTTAAAATTATATGAAAAAAAGAGTTCAACATGGT
GCGACAGGCAAAAATTTAGCTATCTACACTTGTTTCTAAGTTGTCCCACA
CCAAATATCAATTTCAATATAAAATATGATTGATATTTTGAACAAAAGTT
GTTATCCCCCTATTTTTACTTGATCCCCCATAAAATCTCAAAACCCCCCA
AACTTGGTCTGAAAGAATGTCTTGCAATATTTAGGCCCAAACATGACCAG
GCAGTTTTGTGGGTCATTGCTGGAGGGGACTGGCCCTACCCTACCCCTGT
CATCTTGCAACTAATCCTAATGCACAACCTATGCTACATTTAATTTACTA
AAAAAGACCAATTAATTAAGGAAGTATGTTCCGCTTTCAAAAAAACATAC
AATGGTATTTCTCACTAACCCACCTGGGATGGAAATTTGAAGATTTCAAC
CCCTGAAAGTAAATCTTGTTAAAAAAGGGCCAGAAAACAAGTAATGCTGT
ACTTAAAAGAAAATGTTGGTTTGCTGTCAAGGGTTCAAAGAAATTCTGGA
ATTTCCAAGGGGTAAACCCTCATTTTACTGGTAATAAAGTAGAATTATCC
GGGACCAATAGAATTCCTTTTCCAGGGCGCAGGGGATTATTGCAAAATTT
GCCATTTTTCCTGGAGGTATCCACACAATTCAAAATATGTTGATTGTTTT
TGAAAAGGTTTGCTTGCCCCTATATGGATATCTATAATGGAGCAGCCTAC
AGCTTCTAAACTTTTTTGAATGTTAAAAATTGCGTTTATTAATGGGTTAA
AGAGGTATTGATTTATTAAGACCACTGTTCCTTACATTTCCAGTAACATT
AAGTTAAGCATAAAAATTGAATATACAAGGACAAGAATAGATACAAAGAT
GAAAGAAATGGAGAATAACAATGAAACACAAATTGAGGAAAAGAGTGCTG
ATAATAATGCCTGGGATAAAGCTCAAAATGCATTGAAAGATTTGCAAGCT
AATAAGAATAAACCAAAACATAATGGTATGAATGGTGGTTATGCAAACCC
TTATTCAAACGGAATGATTGGGAATGGATACCCACCATACAATAATTTTA
ATCCTCACTTTAATGGTCCACCACCTGGTAGCTATTATAATCAACCACCA
CCTGGACCGTACCAAAGGTAATGATATGATGCTAACTAGCTTATCTTTTA
AAAATAAAAAAAATGCTGCTTCTCCAAAAGGATTGCTGCTTTTTTATTAA
AGGATTTTTGCCGATTGCCAAAGTTACTTATTATATAATAGTATACATCT
CTGGGTTTTAAATTTAGCTTAGACATGGCCTGAAGTAACAATTCAAGTGG
ATCCAAATGTCCCATCAGGGATTACTTTAACTTATTATTATTGTCTTGAT
ACCCAGAGATTACCTTTCAAAGAGATTACCCTTTAAAGAGATGATGACAA
AGAAATAATCAATATTTAAAGCCTGACTGACATGCTGCTAACGAGTTCAG
TCATGATTCTTGTCTCATGTGTAATCCCATTATATTTTATAAAATTAATG
TCTTTTATTTTTATTTTAGAATGCCTTATAATCCTAGCTACCAAGGTTAT
CAAAATAATTACATGCCTCAGTATGGAAATCATGGTCCTTACAATGGTCG
CCCACGATTCAATGGACCACCTCCTGCTAATTACATTAACAATAACATTC
AAGGTGGTTATTATGGTGCTCCTATAAATCAACAAAATGGAGGACCTCCG
CTTAAAAACATTCAGGTGCGTTAAAGTACATTTTGAAAAGCTCCTTATTG
TGTACAGTTCTGGCAGGAGGTCTGTACTACAGTTGCATAAAGTGCAAAGG
GGGTCCCCCAGCAATTTTTTATGGGAGGGGAAAATTGATAAAAGAAAAAT
TATCCTTGGAAGTTGTTAAACAAAACAAGTTCACCTAAATAAGAAAGTTT
TTCCTATCAAAAAATATCAACATGATGCATGGTCACACAAGGAAAAAATG
ATTGAAAATTAAAAATTATTTGAAATCAGCTCATCCTCCAGTACAAGTAC
TCAAAACATAGCCCCAAAAATTTCCCCAAACAAAAATAAAAGATCCCCAC
TCCTTGAGCTCAGGGATGAATCTATGGAGCTGTACAGTACAGACAACTGA
TCAGTCTAAATTCAACCCTTAAATGTTTCTAAACCCTTTCAAAATTTGAT
TAGTTACACCTTTTGTATTTTCTTCGCCAATACAGAACCAAAATAACATG
AAAGACAAATCAAAACAAGAAGAATTTAAAGAAAAAGTCATCGAAAAACC
AAAATCTTTTGCAGATGCTCTCAAACATAACAAGATGTGGAAACAAAAGT
GTAAGCATTATAACTTGTACTGGCATTATTAGCCTAATATGACTACCTTA
AAGGAAGAAAATTTGGCGGATTTAGCCAAATTCTGCCAAATTAAGTTCCG
GCCAAATTTATATTTTCCTCCATTCGCCAAATTAAATTCCCGCCAAATTT
GATTTATTTCACGCATTCCCCAAATTCATGCTATTTCAAGCCTTAAAACT
TTTTTTTTTTGCCTATTTAATAACGCTTTTGGCCAAAAATATCCTGCAAC
CGCAAAATTTAGCTCCCGTCAAATTTAATTTATCCAGCTATCCGCCAAAT
TAAATTCCCCCCAAAAATTCTTCCTTTAAGGTACCTAAATTTTTTTCAAT
CCTTTGTAGCTATTCATCCAATCCATATTTTAGCAAACTTAAATTGATGA
AGAAATGCTTGTGTTGTCCAATTAAAGTGAACTTAAGATTGTCAGCGTTC
TGTTATTGAACCATAAAAGACTAAGTGGAATAAGTAAGAATAAGTGGTCT
ATCATCAGCTTTTTCTCAGAACAATATCTAACTCACACTTAGTACAACTA
ACAATGTTGAGATTTGACGTCATGTTGTCCTATCCACCCACTTACGAACC
CTTTGCTGAATTTTTGTTTTAGCTACAATGAATTTCAAACAATCAAATGA
TATGAACCCTCAAAATAAAGGATGGGCATCTGGGGGATTCCTCAAGGTTG
GAGAAAAACCCAATGACGGAGAACCTGATGCTAATACAAATGTTGAAAAA
CGTGAAAGAGAAGACTTGAAAAATGGTGATCAAAACACAGATGAGCCTAA
AGCAAAGCACACCAAGCCCACAACTCCTTTAAAAAGGTATGTATTCTAAA
ATACATTGGTTTGGAAGTGTGCACTCTCTTTAGAAGGAATTACTTTGAAT
GGGATAAAATCTTGGTGTCATCTGCAAAGGAAATTTGGAAAGGCATCATC
TGCACAATATTTTTCAACAAAACTCAAAATTGTCAAATAAACAATTTTTG
AATGCTTACTGACATCAGAGAAGCGCTAATGATGTTTATTTCAACAACCA
GCTGGTAGGATTTGGCGGTAGAAGGCATAAAATCGTGACAATATTGTCTC
CCAATAGCGCAATCTGCGAAATAAAGTCCCTACGAACATTTATCCCACTA
AGTATTGAATTACACTTACATGGCTCTAGAGTGTGCATACTTATGTAAAT
GACCTTAAAGGTAAAAAAACCCTTCAAATTGCTAAGTTGATCGTACTGCT
TTTCATGTTAACAATAGATTTAAATAGATTTTCATTTGAATTATTGTCAA
TACCGCTGTCTTTACAGGTCTTTATTATTTTAAAAATTTAATAATTCTTT
TCAGCGAGAACAATAAAAAGAAGGAATGGCCTGAAGCAATGAAAACATGG
GTCAGAGAATCATTTGAGCAGTGTGGTAGTGAACGAATTAAGGATAAAAT
GGAAGAGAAATTGAAAACCTTTGTAAATCAAGTTATCAGTGATGGTAGTG
CATGGACTATCAACTGGCAGTTAAAGGCTCTTTTCAAGTAAGATTTCTAA
ACTGAGCTGAAAAACCTAGGAATTGTTTTCTTTAATCCATCTTACTAAAT
GTACTCTATAACACTTGAAAATGTTTCTTTTAGAAGTCATGTATGGTTTT
GGACATTCTATTTGACTCCCTTAATCGTTTTTGTTTAGAACTCCACCAAA
AGGATACGAACGTAGCTCAAGAAGTTCATATCGTAACACTGGCAGTCGGT
CGCGCTCCAGAAGTCGTTCGAGGAGTAATACACCTACTCGTAGACCGTCC
CATAGGCGCTCTTCAAGTAGTGGTGGCTCCTCTAACGACAGTCTGGAGAA
CGTTCGACCTGCATTCAGTAAGAAAATGAAGAACAGACTTGGTAAGAAAA
TGATCAAAAATTCCAATAACAACATCATGGCCAAAAGCAAAAGTACACCT
AACATGAAACAATTTAAGATTGAAAACGATACAGAGGTTACACAGAAGAA
ACAAGATCGAGCTGCACGATTTCAGAAAGACTTCAAGAAGTCTTCGAGCT
TCAATTCGTCCAATTTAATACCGAAAGGAGAATCAGTAAGTTTTTCTCTA
CTGGTTTCCTAAAGATTTCAATACTGAAACTTTGGCAAACTTTATGGCGT
AAATGGCTTTTTGGGGAGTCTCCATTACATCAACAACCGGTGCTAAGTTT
CACTCCTAAATTTATTATTGGCAAATATTTTATTAACTCAATGGTTAACT
AGGAACCTGTCATACCAATTTTCTACCAATCGTACAGACCATTCAACTCT
ATAACAATACATCTTGTTTTCTTTTGCAGCCAATGGATGAAGATGTCGAC
ATGAACTTTCACATCAACGGATACTGCCAAGATTTGACAAAACCATATTT
ACGTTTAACTTCGGTGGGTAATATGTTTTAACCCCTTTTAACATGACATT
TTCCATTTTACGTTAGATTTTTTTACAAGGTTCTGTAAAGGAAACATTGT
TAAGTTCTTACATAAATTTTAACATGCATGCAAAACTTACGGAAGGGTTT
TAAGTAGGTGCTTGCTTGCATTACACTTAGGGGAGACTAATAGTTAACTG
GAAGAGCTATCTTTGATTCCTAGTCATGTATGGTTTCAAATACATTACAG
TTGATTTCTCGGTTCTATGATTTCCCCATTTTTCCTTCGCAGGCGCCTGA
TCCATCGACAGTCCGTCCCGTCAACATTTTGAAGAAGTCATTGGAACACG
TCGAAACGCAATGGAAGAAGAAGAACGACTACCATTTCGCTTGCGAACAG
ATGAAGTCCATCCGTCAAGATTTGACCGTCCAAGGAATTGAAAACGAATT
CACAGTTACAGTATATGAAACCCACGCTAGAATTGCTCTCGAAAAAGTAA
GTTTTAGGCAGACATTCCCCTCTTCATAATTGTATCCCATCCTTTTTAAA
TATTTTTAAGCCATTTAATATGACCCATCCTTTTATAATAACCACAACTT
GNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNGGTAAGAAAATGATCAAAAATTCCAATAACAACA
TCATGGCCAAAAGCAAAAGTACACCTAACATGAAACAATTTAAGATTGAA
AACGATACAGAGGTTACACAGAAGAAACAAGATCGAGCTGCACGATTTCA
GAAAGACTTCAAGAAGTCTTCGAGCTTCAATTCGTCCAATTTAATACCGA
AAGGAGAATCAGTAAGTTTTTCTCTACTGGTTTCCTAAAGATTTCAATAC
TGAAACTTTGGCAAACTTTATGGCGTAAATGGCTTTTTGGGGAGTCTCCA
TTACATCAACAACCGGTGCTAAGTTTCACTCCTAAATTTATTATTGGCAA
ATATTTTATTAACTCAATGGTTAACTAGGAACCTGTCATACCAGTTTTCT
ACCAATCGTACAGACCATTCAACTCTATAACAATACATCTTGTTTTCTTT
TGCAGCCAATGGATGAAGATGTCGACATGAACTTTCACATCAACGGATAC
TGCCAAGATTTGACAAAACCATATTTACGTTTAACTTCGGTGGGTAATAT
GTTTTAACCCCTTTTAACATGACATTTTCCATTTTACGTTAGATTTTTTT
ACAAGGTTCTGTAAAGGAAACATTGTTAAGTTCTTACATAAATTTTAACA
TGCATGCAAAACTTACGGAAGGGTTTTAAGTAGGTGCTTGCTTGCATTAC
ACTTAGGGGAGACTAATAGTTAACTGGAAGAGCTATCTTTGATTCCTAGT
CATGTATGGTTTCAAATACATTACAGTTGATTTCTCGGTTCTATGATTTC
CCCATTTTTCCTTCGCAGGCGCCTGATCCATCGACAGTCCGTCCCGTCAA
CATTTTGAAGAAGTCATTGGAACACGTCGAAACGCAATGGAAGAAGAAGA
ACGACTACCATTTCGCTTGCGAACAGATGAAGTCCATCCGTCAAGATTTG
ACCGTCCAAGGAATTGAAAACGAATTCACAGTTACAGTATATGAAACCCA
CGCTAGAATTGCTCTCGAAAAAGTAAGTTTTAGGCAGACATTCCCCTCTT
CATAATTGTATCCCATCCTTTTTAAATATTTTTAAGCCATTTAATATGAC
CCATCCTTTTATAATAACCACAACTTGNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNTTTGTCTCTCTCTTTTTCCAGGGTGATCGAGAGGAATT
CAATCAATGCCAAACGTGTTTACGTAGGCTTTACAGCAAAGGAATCAACG
GTCAAGTAGCCGAGTTTACGGCCTACAGTATTCTCTACTATATTTACACA
AAAAGCACTTTGGACTTAAATTCTTGTCTTGCCTCACTGACCAAAGATCT
GAAGAAAGACGCGCTTGTTCAACACGCCCTGTCGGTGCGCTCTGCATTGG
CACTAGATAATTATCGTTCATTTTTCAAGTTTTATTTACAAGCACCAAAA
ATGGGTGGATCTCTCATTGACCTTTTTATAGCTAGGGAACGTAAAGAAGC
ACTCAAACGGCTAGTGAAGGCGTAAGTATATAAACACCCCTCCCCTCCCC
TTCTTTCTGAAACCAGCCAGCCTATCCTAGAAATCAGTCGCCTTTCCTCA
CATCTAATGAGCAGTTTAAACTTATCTCTTCAACCATTATCCTTTTAGTA
TATAAAGTCAACCCCATCTAAGCACATACATTTCTTTATAATTACCTCCT
CTGTATAGTAGTACTGTTAACACATCCTGTATTTCTTTTTAAGGCACTTT
AAGTGTTAAAATTTTCTTATTAAAAAAATCTAAGCTCCCCATTGAGGATT
TTTTAGCCAGTGGGCGACAGTATCGGTAAGAATGTGATTGGATTTGGAGA
AACTTCGACTTAAATATATGAGAATCTCAAATATCTTTACAAAACAATTT
GCCCCAAAAAGTTTACTATTTTTCGCTGGGATAAATTCTCGGGACTCTGG
GAATTTTTTCACCGATGCGCAGGTAAGTTTTAACCCTCGGGATAGACCTT
GAGACTAAATCTGTCCTCTGTAACTTCAGTCCTTTACAAAGCTCAATCTA
CCTTTTCTCTGTATATTCATGTTTTTTTTTCTTTCTTTTTCAACCGTGGT
TGATAGGTATNATACCTTTTCTCTGTATATTCATGTTCATTTTATTTTCT
TTTTCAACCGTGGTTGATAGGTATCGGCCAAGTTTAAGTGTCGCACATAT
AACAACCCAATTAGCCTTCAAATCTGAAGACGAATGCCTCGCTTGGCTTC
AAGAATTGAATATCACATTCCTTGCTAACGACCCCACTAAAGTTGATTGT
AAAGCATCTGTTGTTACATAAGGGAGAGAGCATACAGCTCGTTCGAGTTT
TTTCATGGCTGTGAAAGTTGGTTGAGTGCCTCATCCAATGAAAAGCAAAG
GAGGAAAGAAGCCTGATTTTCATGTCAAGGTCCTCTCATTTTACCAAGAA
GGTTTTATTCGCACCCCCTACACGGTAGTAGTAGTTCAGTCACTACACAA
AAAGAGACTAAGCTTTAAAAAATGAAAAATAAGGTCCTGTTCATAGATCC
TGCCCTATATCTTATCCTGTTCGCTGTGCTGTCACTATGTCAATTCATCC
TACATGGTGTTTCTACCTACCCTTTAATTCAGTTAAATTTACAGCATTTT
CAACACGTAGCACGCATTATATATGGTATCCCTTATGAACTATATTATGA
AAGTCACGGTAGGTTGGTGGTTCTTAATAAATGAACAGTAAATGGTTATT
TCCTTGAAATTGAAAGGTTTGTAAGTCTCAATAAACCGAGTGCTATTGGA
GCAGATTCAGACATTTCAAGTATTACAATATTAACATTGCATTTTACGGC
AAGAAGAAATTGTTACGACTGCTCTATGCAGCATGTCACAATGAAAGATA
TACAACAAACATGATTGGATACGATTTTGACAGTGCTTATATGCTTGTCA
AATCGTACACAGAGCAAATAGACTGATACTAGCTAGAGTTAGCTCTGTTT
TGATGTCTTGGATTACCTAAGGAAAAACAATTCATGGAGAAATTTTGATG
AAAATACTCTGATTTCGTTTTGTTTTATGATTAATTTTTTCACTAGATGT
AGGCGGTATTGTTGCTTATATTTTATGAATTGTATTCATATGACATGACG
ACTTAAACCCTGGACCCTGTTCCCTTATCCTTTTCCCCTGATCTTTTATA
ATGTCAATTTCAGTTTTGAATCTTTGTTATCGATTAGATGCTTGATTTGC
ACCCTGTTACGCCAGTTCCCCACTCTGACAAAGACGATTACGAAATTGCA
ATTCCATTATTGTCTCTGCAGTCTTCTTTTAGAGTTAGTTAGAATTCAGT
GACAATCTTTTTGTATTTATTTTGTACAAATTGTATATATGATTTATGAA
ATTATTATTCTTTTTTCTTACTAAAAGATTCAGATCTACGATTCGAAGAA
ATCGAACTCTCAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_039362XLOC_039362Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00062842-exon-scaffold_372-1575043694:316428..319794TCONS_00062842-exon-scaffold_372-1575043694:316428..319794Clytia hemisphaericaexon
TCONS_00062842-exon-scaffold_372-1575043694:315830..316025TCONS_00062842-exon-scaffold_372-1575043694:315830..316025Clytia hemisphaericaexon
TCONS_00062842-exon-scaffold_372-1575043694:315245..315359TCONS_00062842-exon-scaffold_372-1575043694:315245..315359Clytia hemisphaericaexon
TCONS_00062842-exon-scaffold_372-1575043694:314409..314622TCONS_00062842-exon-scaffold_372-1575043694:314409..314622Clytia hemisphaericaexon
TCONS_00062842-exon-scaffold_372-1575043694:313708..313890TCONS_00062842-exon-scaffold_372-1575043694:313708..313890Clytia hemisphaericaexon
TCONS_00062842-exon-scaffold_372-1575043694:313160..313556TCONS_00062842-exon-scaffold_372-1575043694:313160..313556Clytia hemisphaericaexon
TCONS_00062842-exon-scaffold_372-1575043694:312832..312915TCONS_00062842-exon-scaffold_372-1575043694:312832..312915Clytia hemisphaericaexon
TCONS_00062842-exon-scaffold_372-1575043694:310973..311176TCONS_00062842-exon-scaffold_372-1575043694:310973..311176Clytia hemisphaericaexon
TCONS_00062842-exon-scaffold_372-1575043694:308624..308961TCONS_00062842-exon-scaffold_372-1575043694:308624..308961Clytia hemisphaericaexon
TCONS_00062842-exon-scaffold_372-1575043694:306681..307974TCONS_00062842-exon-scaffold_372-1575043694:306681..307974Clytia hemisphaericaexon
TCONS_00062842-exon-scaffold_372-1510915933:316428..319794TCONS_00062842-exon-scaffold_372-1510915933:316428..319794Clytia hemisphaericaexon
TCONS_00062842-exon-scaffold_372-1510915933:315830..316025TCONS_00062842-exon-scaffold_372-1510915933:315830..316025Clytia hemisphaericaexon
TCONS_00062842-exon-scaffold_372-1510915933:315245..315359TCONS_00062842-exon-scaffold_372-1510915933:315245..315359Clytia hemisphaericaexon
TCONS_00062842-exon-scaffold_372-1510915933:314409..314622TCONS_00062842-exon-scaffold_372-1510915933:314409..314622Clytia hemisphaericaexon
TCONS_00062842-exon-scaffold_372-1510915933:313708..313890TCONS_00062842-exon-scaffold_372-1510915933:313708..313890Clytia hemisphaericaexon
TCONS_00062842-exon-scaffold_372-1510915933:313160..313556TCONS_00062842-exon-scaffold_372-1510915933:313160..313556Clytia hemisphaericaexon
TCONS_00062842-exon-scaffold_372-1510915933:312832..312915TCONS_00062842-exon-scaffold_372-1510915933:312832..312915Clytia hemisphaericaexon
TCONS_00062842-exon-scaffold_372-1510915933:310973..311176TCONS_00062842-exon-scaffold_372-1510915933:310973..311176Clytia hemisphaericaexon
TCONS_00062842-exon-scaffold_372-1510915933:308624..308961TCONS_00062842-exon-scaffold_372-1510915933:308624..308961Clytia hemisphaericaexon
TCONS_00062842-exon-scaffold_372-1510915933:306681..307974TCONS_00062842-exon-scaffold_372-1510915933:306681..307974Clytia hemisphaericaexon
TCONS_00062842-exon-scaffold_372-1491911889:316428..319794TCONS_00062842-exon-scaffold_372-1491911889:316428..319794Clytia hemisphaericaexon
TCONS_00062842-exon-scaffold_372-1491911889:315830..316025TCONS_00062842-exon-scaffold_372-1491911889:315830..316025Clytia hemisphaericaexon
TCONS_00062842-exon-scaffold_372-1491911889:315245..315359TCONS_00062842-exon-scaffold_372-1491911889:315245..315359Clytia hemisphaericaexon
TCONS_00062842-exon-scaffold_372-1491911889:314409..314622TCONS_00062842-exon-scaffold_372-1491911889:314409..314622Clytia hemisphaericaexon
TCONS_00062842-exon-scaffold_372-1491911889:313708..313890TCONS_00062842-exon-scaffold_372-1491911889:313708..313890Clytia hemisphaericaexon
TCONS_00062842-exon-scaffold_372-1491911889:313160..313556TCONS_00062842-exon-scaffold_372-1491911889:313160..313556Clytia hemisphaericaexon
TCONS_00062842-exon-scaffold_372-1491911889:312832..312915TCONS_00062842-exon-scaffold_372-1491911889:312832..312915Clytia hemisphaericaexon
TCONS_00062842-exon-scaffold_372-1491911889:310973..311176TCONS_00062842-exon-scaffold_372-1491911889:310973..311176Clytia hemisphaericaexon
TCONS_00062842-exon-scaffold_372-1491911889:308624..308961TCONS_00062842-exon-scaffold_372-1491911889:308624..308961Clytia hemisphaericaexon
TCONS_00062842-exon-scaffold_372-1491911889:306681..307974TCONS_00062842-exon-scaffold_372-1491911889:306681..307974Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_372supercontigscaffold_372:306681..319794 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.597574	0.408991	0.785628	0.779998	0.859084	0.858097	0.566754	0.731017	0.600942	0.426158	0.406087	0.639067	0.389273	0.501987	0.285675	0.345705	0.299481	0.378013	0.281152	0.418385	0.612156	0.658715	0.113265	0.169851	0.620565	0.657502	0.568941	0.484397	0.316007	0.332532
Blast
[Close]
BLAST of TCONS_00062842 vs. Swiss-Prot (Human)
Match: LENG8 (Leukocyte receptor cluster member 8 OS=Homo sapiens GN=LENG8 PE=1 SV=2)

HSP 1 Score: 280.026 bits (715), Expect = 2.462e-78
Identity = 144/247 (58.30%), Postives = 167/247 (67.61%), Query Frame = 3 
Query: 4365 DTEVTQKKQDRAARFQKDXXXXXXXXXXXLIPKGESPMDEDVD-MNFHINGYCQDLTKPYLRLTSAPDPSTVRPVNILKKSLEHVETQWKKKNDYHFACEQMKSIRQDLTVQGIENEFTVTVYETHARIALEKGDREEFNQCQTCLRRLYSKGINGQVAEFTAYSILYYIYTKSTLDLNSCLASLTKDLKKDALVQHALSVRSALALDNYRSFFKFYLQAPKMGGSLIDLFIARERKEALKRLVKAY 5102
            D E   KKQ RAARFQ    +        L          D D     I G C D+TK YLRLT APDPSTVRPV +LKKSL  V+  WK+K DY FACEQMKSIRQDLTVQGI  EFTV VYETHARIALEKGD EEFNQCQT L+ LY++ + G V EFTAY ILYYI+TK++ D+ + LA LT++LK D  V HAL++R+A AL NY  FF+ Y  AP M G L+D F  RERK ALK ++K Y
Sbjct:  465 DPERELKKQKRAARFQHGHSRRLRLEPLVLQMSSLESSGADPDWQELQIVGTCPDITKHYLRLTCAPDPSTVRPVAVLKKSLCMVKCHWKEKQDYAFACEQMKSIRQDLTVQGIRTEFTVEVYETHARIALEKGDHEEFNQCQTQLKSLYAENLPGNVGEFTAYRILYYIFTKNSGDITTELAYLTRELKADPCVAHALALRTAWALGNYHRFFRLYCHAPCMSGYLVDKFADRERKVALKAMIKTY 711
The following BLAST results are available for this feature:
BLAST of TCONS_00062842 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
LENG82.462e-7858.30Leukocyte receptor cluster member 8 OS=Homo sapien... [more]
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