TCONS_00062841 (transcript) - C. hemisphaerica

Overview
NameTCONS_00062841
Unique NameTCONS_00062841
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4647

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00062841 ID=TCONS_00062841|Name=TCONS_00062841|organism=Clytia hemisphaerica|type=transcript|length=4647bp
TGATATTTTGAACAAAAGTTGTTATCCCCCTATTTTTACTTGATCCCCCA
TAAAATCTCAAAACCCCCCAAACTTGGTCTGAAAGAATGTCTTGCAATAT
TTAGGCCCAAACATGACCAGGCAGTTTTGTGGGTCATTGCTGGAGGGGAC
TGGCCCTACCCTACCCCTGTCATCTTGCAACTAATCCTAATGCACAACCT
ATGCTACATTTAATTTACTAAAAAAGACCAATTAATTAAGGAAGTATGTT
CCGCTTTCAAAAAAACATACAATGGTATTTCTCACTAACCCACCTGGGAT
GGAAATTTGAAGATTTCAACCCCTGAAAGtaaatcttgttaaaaaagGGC
CAGAAAACAAGTAATGCTGTACTTAAAAGAAAATGTTGGTTTGCTGTCAA
GGGTTCAAAGAAATTCTGGAATTTCCAAGGGGTAAACCCTCATTTTACTG
GTAATAAAGTAGAATTATCCGGGACCAATAGAATTCCTTTTCCAGGGCGC
AGGGGATTATtgcaaaatttgccatttttccTGGAGGTATCCACACAATT
CAAAATATGTTGATTGTTTTTGAAAAGGTTTGCTTGCCCCTATATGGATA
TCTATAATGGAGCAGCCTACAGcttctaaacttttttgaatGTTAAAAAT
TGCGTTTATTAATGGGTTAAAGAGGTATTGATTTATTAAGACCACTGTTC
CTTACATTTCCAGTAACATTAAGTTAAgcataaaaattgaatatacaaGG
ACAAGAATAGATACAAAGATGAAAGAAATGGAGAATAACAATGAAACACA
AATTGAGGAAAAGAGTGCTGATAATAATGCCTGGGATAAAGCTCAAAATG
CATTGAAAGATTTGCAAGCTAATAAGAATAAACCAAAACATAATGGTATG
AATGGTGGTTATGCAAACCCTTATTCAAACGGAATGATTGGGAATGGATA
CCCACCATACAATAATTTTAATCCTCACTTTAATGGTCCACCACCTGGTA
GCTATTATAATCAACCACCACCTGGACCGTACCAAAGaatgCCTTATAAT
CCTAGCTACCAAGGttatcaaaataattacatGCCTCAGTATGGAAATCA
TGGTCCTTACAATGGTCGCCCACGATTCAATGGACCACCTCCTGCTAATT
ACATTAACAATAACATTCAAGGTGGTTATTATGGTGCTCCTATAAATCAA
CAAAATGGAGGACCTCCGCTTAAAAACATTCAGAACCAAAATAACATGAA
AGACAAATCAAAACAAgaagaatttaaagaaaaagtcATCGAAAAACCAA
AATCTTTTGCAGATGCTCTCAAACATAACAAGATGTGGAAACAAAAGTct
ACAATGaatttcaaacaatcaaatgaTATGAACCCTCAAAATAAAGGATG
GGCATCTGGGGGATTCCTCAAGGTTGGAGAAAAACCCAATGACGGAGAAC
CTGATGCTAATACAAATGTTGAAAAACGTGAAAGAGAAGACTTGAAAAAT
GGTGATCAAAACACAGATGAGCCTAAAGCAAAGCACACCAAGCCCACAAC
TCCTTTAAAAAGCGAGAACAATAAAAAGAAGGAATGGCCTGAAGCAATGA
AAACATGGGTCAGAGAATCATTTGAGCAGTGTGGTAGTGAACGAATTAAG
GATAAAATGGAAGAGAAATTGAAAACCTttgtaaatcaagttatcaGTGA
TGGTAGTGCATGGACTATCAACTGGCAGTTAAAGGCTCTTTTCAAAACTC
CACCAAAAGGATACGAACGTAGCTCAAGAAGTTCATATCGTAACACTGGC
AGTCGGTCGCGCTCCAGAAGTCGTTCGAGGAGTAATACACCTACTCGTAG
ACCGTCCCATAGGCGCTCTTCAAGTAGTGGTGGCTCCTCTAACGACAGTC
TGGAGAACGTTCGACCTGCATTCAGTAAGAAAATGAAGAACAGACTTGGt
aagaaaatgatcaaaaattcCAATAACAACATCATGGCCAAAAGCAAAAG
TACACCTAACATGAAACAATTTAAGATTGAAAACGATACAGAGGTTACAC
AGAAGAAACAAGATCGAGCTGCACGATTTCAGAAAGACTTCAAGAAGTCT
TCGAGCTTCAATTCGTCCAATTTAATACCGAAAGGAGAATCACCAATGGA
TGAAGATGTCGACATGAACTTTCACATCAACGGATACTGCCAAGATTTGA
CAAAACCATATTTACGTTTAACTTCGGCGCCTGATCCATCGACAGTCCGT
CCCGTCAACATTTTGAAGAAGTCATTGGAACACGTCGAAACGCAATGGAA
GAAGAAGAACGACTACCATTTCGCTTGCGAACAGATGAAGTCCATCCGTC
AAGATTTGACCGTCCAAGGAATTGAAAACGAATTCACAGTTACAGTATAT
GAAACCCACGCTAGAATTGCTCTCGAAAAAGGTGATCGAGAGGAATTCAA
TCAATGCCAAACGTGTTTACGTAGGCTTTACAGCAAAGGAATCAACGGTC
AAGTAGCCGAGTTTACGGCCTACAGTATTCTCTACTATATTTACACAAAA
AGCACTTTGGACTTAAATTCTTGTCTTGCCTCACTGACCAAAGATCTGAA
GAAAGACGCGCTTGTTCAACACGCCCTGTCGGTGCGCTCTGCATTGGCAC
TAGATAATTATCgttcatttttcaagttttatttacaAGCACCAAAAATG
GGTGGATCTCTCATTGACCTTTTTATAGCTAGGGAACGTAAAGAAGCACT
CAAACGGCTAGTGAAGGCGTAAGTATATAAACACCCCTCCCCTCCCCTTC
TTTCTGAAACCAGCCAGCCTATCCTAGAAATCAGTCGCCTTTCCTCACAT
CTAATGAGCAGTTTAAACTTATCTCTTCAACCATTATCCTTTTAGTATAT
AAAGTCAACCCCATCTAAGCACATACATTTCTTTATAATTACCTCCTCTG
TATAGTAGTACTGTTAACACATCCTGTATTTCTTTTTAAGGCACTTTAAg
tgttaaaattttcttattaaaaaaatctaagCTCCCCATTGAGgattttt
tagccagtgggCGACAGTATCGGTAAGAATGTGATTGGATTTGGAGAAAC
TTCGACTTAAATATATGAGAATCTCAAATATCTTTACAAAACAATTTGCC
CCAAAAAGTTTACTATTTTTCGCTGGGATAAATTCTCGGGACTCTGGGAA
TTTTTTCACCGATGCGCAGGTAAGTTTTAACCCTCGGGATAGACCTTGAG
ACTAAATCTGTCCTCTGTAACTTCAGTCCTTTACAAAGCTCAATCTACCT
TTTCTCTGtatattcatgtttttttttctttctttttcaaccgTGGTTGA
TAGGTATCGGCCAAGTTTAAGTGTCGCACATATAACAACCCAATTAGCCT
TCAAATCTGAAGACGAATGCCTCGCTTGGCTTCAAGAATTGAATATCACA
TTCCTTGCTAACGACCCCACTAAAGTTGATTGTAAAGCATCTGTTGTTAC
ATAAGGGAGAGAGCATACAGCTCGTTCGAGTTTTTTCATGGCTGTGAAAG
TTGGTTGAGTGCCTCATCCAATGAAAAGCAAAGGAGGAAAGAAGCCTGAT
TTTCATGTCAAGGTCCTCTCATTTTACCAAGAAGGTTTTATTCGCACCCC
CTACACGGTAGTAGTAGTTCAGTCACTACACAAAAAGAGACTaagcttta
aaaaatgaaaaataaggtCCTGTTCATAGATCCTGCCCTATATCTTATCC
TGTTCGCTGTGCTGTCACTATGTCAATTCATCCTACATGGTGTTTCTACC
TACCCTTTAATTCAGTTAAATTTACAGCATTTTCAACACGTAGCACGCAT
TATATATGGTATCCCTTATGAACTATATTATGAAAGTCACGGTAGGTTGG
TGGTTCTTAATAAATGAACAGTAAATGGTTATTTCCTTGAAATTGAAAGG
TTTGTAAGTCTCAATAAACCGAGTGCTATTGGAGCAGATTCAGACATTTC
AAGTATTACAATATTAACATTGCATTTTACGGCAAGAAGAAATTGTTACG
ACTGCTCTATGCAGCATGTCACAATGAAAGATATACAACAAACATGATTG
GATACGATTTTGACAGTGCTTATATGCTTGTCAAATCGTACACAGAGCAA
ATAGACTGATACTAGCTAGAGTTAGCTCTGTTTTGATGTCTTGGATTACC
TAAGGAAAAACAATTCATGgagaaattttgatgaaaatactCTGATTTCG
TTTTGTTTTatgattaattttttcactagaTGTAGGCGGTATTGTTGCTT
ATATTTTATGAATTGTATTCATATGACATGACGACTTAAACCCTGGACCC
TGTTCCCTTATCCTTTTCCCCTGATCTTTTATAATGTCAATTTCAGTTTT
GAATCTTTGTTATCGATTAGATGCTTGATTTGCACCCTGTTACGCCAGTT
CCCCACTCTGACAAAGACGATTACGAAATTGCAATTCCATTATTGTCTCT
GCAGTCTTCTTTTAGAGTTAGTTAGAATTCAGTGACaatctttttgtatt
tattttgtacAAATTGTATATATGATTTATGAAATTATTATTCTTTTTTC
TTACTAAAAGATTCAGATCTACGATTCGAAGAAATCGAACTCTCAat
Run BLAST on NCBI

transcript from alignment at scaffold_372:306681..317464-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00062841 ID=TCONS_00062841|Name=TCONS_00062841|organism=Clytia hemisphaerica|type=transcript|length=10784bp|location=Sequence derived from alignment at scaffold_372:306681..317464- (Clytia hemisphaerica)
TGATATTTTGAACAAAAGTTGTTATCCCCCTATTTTTACTTGATCCCCCA
TAAAATCTCAAAACCCCCCAAACTTGGTCTGAAAGAATGTCTTGCAATAT
TTAGGCCCAAACATGACCAGGCAGTTTTGTGGGTCATTGCTGGAGGGGAC
TGGCCCTACCCTACCCCTGTCATCTTGCAACTAATCCTAATGCACAACCT
ATGCTACATTTAATTTACTAAAAAAGACCAATTAATTAAGGAAGTATGTT
CCGCTTTCAAAAAAACATACAATGGTATTTCTCACTAACCCACCTGGGAT
GGAAATTTGAAGATTTCAACCCCTGAAAGTAAATCTTGTTAAAAAAGGGC
CAGAAAACAAGTAATGCTGTACTTAAAAGAAAATGTTGGTTTGCTGTCAA
GGGTTCAAAGAAATTCTGGAATTTCCAAGGGGTAAACCCTCATTTTACTG
GTAATAAAGTAGAATTATCCGGGACCAATAGAATTCCTTTTCCAGGGCGC
AGGGGATTATTGCAAAATTTGCCATTTTTCCTGGAGGTATCCACACAATT
CAAAATATGTTGATTGTTTTTGAAAAGGTTTGCTTGCCCCTATATGGATA
TCTATAATGGAGCAGCCTACAGCTTCTAAACTTTTTTGAATGTTAAAAAT
TGCGTTTATTAATGGGTTAAAGAGGTATTGATTTATTAAGACCACTGTTC
CTTACATTTCCAGTAACATTAAGTTAAGCATAAAAATTGAATATACAAGG
ACAAGAATAGATACAAAGATGAAAGAAATGGAGAATAACAATGAAACACA
AATTGAGGAAAAGAGTGCTGATAATAATGCCTGGGATAAAGCTCAAAATG
CATTGAAAGATTTGCAAGCTAATAAGAATAAACCAAAACATAATGGTATG
AATGGTGGTTATGCAAACCCTTATTCAAACGGAATGATTGGGAATGGATA
CCCACCATACAATAATTTTAATCCTCACTTTAATGGTCCACCACCTGGTA
GCTATTATAATCAACCACCACCTGGACCGTACCAAAGGTAATGATATGAT
GCTAACTAGCTTATCTTTTAAAAATAAAAAAAATGCTGCTTCTCCAAAAG
GATTGCTGCTTTTTTATTAAAGGATTTTTGCCGATTGCCAAAGTTACTTA
TTATATAATAGTATACATCTCTGGGTTTTAAATTTAGCTTAGACATGGCC
TGAAGTAACAATTCAAGTGGATCCAAATGTCCCATCAGGGATTACTTTAA
CTTATTATTATTGTCTTGATACCCAGAGATTACCTTTCAAAGAGATTACC
CTTTAAAGAGATGATGACAAAGAAATAATCAATATTTAAAGCCTGACTGA
CATGCTGCTAACGAGTTCAGTCATGATTCTTGTCTCATGTGTAATCCCAT
TATATTTTATAAAATTAATGTCTTTTATTTTTATTTTAGAATGCCTTATA
ATCCTAGCTACCAAGGTTATCAAAATAATTACATGCCTCAGTATGGAAAT
CATGGTCCTTACAATGGTCGCCCACGATTCAATGGACCACCTCCTGCTAA
TTACATTAACAATAACATTCAAGGTGGTTATTATGGTGCTCCTATAAATC
AACAAAATGGAGGACCTCCGCTTAAAAACATTCAGGTGCGTTAAAGTACA
TTTTGAAAAGCTCCTTATTGTGTACAGTTCTGGCAGGAGGTCTGTACTAC
AGTTGCATAAAGTGCAAAGGGGGTCCCCCAGCAATTTTTTATGGGAGGGG
AAAATTGATAAAAGAAAAATTATCCTTGGAAGTTGTTAAACAAAACAAGT
TCACCTAAATAAGAAAGTTTTTCCTATCAAAAAATATCAACATGATGCAT
GGTCACACAAGGAAAAAATGATTGAAAATTAAAAATTATTTGAAATCAGC
TCATCCTCCAGTACAAGTACTCAAAACATAGCCCCAAAAATTTCCCCAAA
CAAAAATAAAAGATCCCCACTCCTTGAGCTCAGGGATGAATCTATGGAGC
TGTACAGTACAGACAACTGATCAGTCTAAATTCAACCCTTAAATGTTTCT
AAACCCTTTCAAAATTTGATTAGTTACACCTTTTGTATTTTCTTCGCCAA
TACAGAACCAAAATAACATGAAAGACAAATCAAAACAAGAAGAATTTAAA
GAAAAAGTCATCGAAAAACCAAAATCTTTTGCAGATGCTCTCAAACATAA
CAAGATGTGGAAACAAAAGTGTAAGCATTATAACTTGTACTGGCATTATT
AGCCTAATATGACTACCTTAAAGGAAGAAAATTTGGCGGATTTAGCCAAA
TTCTGCCAAATTAAGTTCCGGCCAAATTTATATTTTCCTCCATTCGCCAA
ATTAAATTCCCGCCAAATTTGATTTATTTCACGCATTCCCCAAATTCATG
CTATTTCAAGCCTTAAAACTTTTTTTTTTTGCCTATTTAATAACGCTTTT
GGCCAAAAATATCCTGCAACCGCAAAATTTAGCTCCCGTCAAATTTAATT
TATCCAGCTATCCGCCAAATTAAATTCCCCCCAAAAATTCTTCCTTTAAG
GTACCTAAATTTTTTTCAATCCTTTGTAGCTATTCATCCAATCCATATTT
TAGCAAACTTAAATTGATGAAGAAATGCTTGTGTTGTCCAATTAAAGTGA
ACTTAAGATTGTCAGCGTTCTGTTATTGAACCATAAAAGACTAAGTGGAA
TAAGTAAGAATAAGTGGTCTATCATCAGCTTTTTCTCAGAACAATATCTA
ACTCACACTTAGTACAACTAACAATGTTGAGATTTGACGTCATGTTGTCC
TATCCACCCACTTACGAACCCTTTGCTGAATTTTTGTTTTAGCTACAATG
AATTTCAAACAATCAAATGATATGAACCCTCAAAATAAAGGATGGGCATC
TGGGGGATTCCTCAAGGTTGGAGAAAAACCCAATGACGGAGAACCTGATG
CTAATACAAATGTTGAAAAACGTGAAAGAGAAGACTTGAAAAATGGTGAT
CAAAACACAGATGAGCCTAAAGCAAAGCACACCAAGCCCACAACTCCTTT
AAAAAGGTATGTATTCTAAAATACATTGGTTTGGAAGTGTGCACTCTCTT
TAGAAGGAATTACTTTGAATGGGATAAAATCTTGGTGTCATCTGCAAAGG
AAATTTGGAAAGGCATCATCTGCACAATATTTTTCAACAAAACTCAAAAT
TGTCAAATAAACAATTTTTGAATGCTTACTGACATCAGAGAAGCGCTAAT
GATGTTTATTTCAACAACCAGCTGGTAGGATTTGGCGGTAGAAGGCATAA
AATCGTGACAATATTGTCTCCCAATAGCGCAATCTGCGAAATAAAGTCCC
TACGAACATTTATCCCACTAAGTATTGAATTACACTTACATGGCTCTAGA
GTGTGCATACTTATGTAAATGACCTTAAAGGTAAAAAAACCCTTCAAATT
GCTAAGTTGATCGTACTGCTTTTCATGTTAACAATAGATTTAAATAGATT
TTCATTTGAATTATTGTCAATACCGCTGTCTTTACAGGTCTTTATTATTT
TAAAAATTTAATAATTCTTTTCAGCGAGAACAATAAAAAGAAGGAATGGC
CTGAAGCAATGAAAACATGGGTCAGAGAATCATTTGAGCAGTGTGGTAGT
GAACGAATTAAGGATAAAATGGAAGAGAAATTGAAAACCTTTGTAAATCA
AGTTATCAGTGATGGTAGTGCATGGACTATCAACTGGCAGTTAAAGGCTC
TTTTCAAGTAAGATTTCTAAACTGAGCTGAAAAACCTAGGAATTGTTTTC
TTTAATCCATCTTACTAAATGTACTCTATAACACTTGAAAATGTTTCTTT
TAGAAGTCATGTATGGTTTTGGACATTCTATTTGACTCCCTTAATCGTTT
TTGTTTAGAACTCCACCAAAAGGATACGAACGTAGCTCAAGAAGTTCATA
TCGTAACACTGGCAGTCGGTCGCGCTCCAGAAGTCGTTCGAGGAGTAATA
CACCTACTCGTAGACCGTCCCATAGGCGCTCTTCAAGTAGTGGTGGCTCC
TCTAACGACAGTCTGGAGAACGTTCGACCTGCATTCAGTAAGAAAATGAA
GAACAGACTTGGTAAGAAAATGATCAAAAATTCCAATAACAACATCATGG
CCAAAAGCAAAAGTACACCTAACATGAAACAATTTAAGATTGAAAACGAT
ACAGAGGTTACACAGAAGAAACAAGATCGAGCTGCACGATTTCAGAAAGA
CTTCAAGAAGTCTTCGAGCTTCAATTCGTCCAATTTAATACCGAAAGGAG
AATCAGTAAGTTTTTCTCTACTGGTTTCCTAAAGATTTCAATACTGAAAC
TTTGGCAAACTTTATGGCGTAAATGGCTTTTTGGGGAGTCTCCATTACAT
CAACAACCGGTGCTAAGTTTCACTCCTAAATTTATTATTGGCAAATATTT
TATTAACTCAATGGTTAACTAGGAACCTGTCATACCAATTTTCTACCAAT
CGTACAGACCATTCAACTCTATAACAATACATCTTGTTTTCTTTTGCAGC
CAATGGATGAAGATGTCGACATGAACTTTCACATCAACGGATACTGCCAA
GATTTGACAAAACCATATTTACGTTTAACTTCGGTGGGTAATATGTTTTA
ACCCCTTTTAACATGACATTTTCCATTTTACGTTAGATTTTTTTACAAGG
TTCTGTAAAGGAAACATTGTTAAGTTCTTACATAAATTTTAACATGCATG
CAAAACTTACGGAAGGGTTTTAAGTAGGTGCTTGCTTGCATTACACTTAG
GGGAGACTAATAGTTAACTGGAAGAGCTATCTTTGATTCCTAGTCATGTA
TGGTTTCAAATACATTACAGTTGATTTCTCGGTTCTATGATTTCCCCATT
TTTCCTTCGCAGGCGCCTGATCCATCGACAGTCCGTCCCGTCAACATTTT
GAAGAAGTCATTGGAACACGTCGAAACGCAATGGAAGAAGAAGAACGACT
ACCATTTCGCTTGCGAACAGATGAAGTCCATCCGTCAAGATTTGACCGTC
CAAGGAATTGAAAACGAATTCACAGTTACAGTATATGAAACCCACGCTAG
AATTGCTCTCGAAAAAGTAAGTTTTAGGCAGACATTCCCCTCTTCATAAT
TGTATCCCATCCTTTTTAAATATTTTTAAGCCATTTAATATGACCCATCC
TTTTATAATAACCACAACTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGTAAGAAAATGAT
CAAAAATTCCAATAACAACATCATGGCCAAAAGCAAAAGTACACCTAACA
TGAAACAATTTAAGATTGAAAACGATACAGAGGTTACACAGAAGAAACAA
GATCGAGCTGCACGATTTCAGAAAGACTTCAAGAAGTCTTCGAGCTTCAA
TTCGTCCAATTTAATACCGAAAGGAGAATCAGTAAGTTTTTCTCTACTGG
TTTCCTAAAGATTTCAATACTGAAACTTTGGCAAACTTTATGGCGTAAAT
GGCTTTTTGGGGAGTCTCCATTACATCAACAACCGGTGCTAAGTTTCACT
CCTAAATTTATTATTGGCAAATATTTTATTAACTCAATGGTTAACTAGGA
ACCTGTCATACCAGTTTTCTACCAATCGTACAGACCATTCAACTCTATAA
CAATACATCTTGTTTTCTTTTGCAGCCAATGGATGAAGATGTCGACATGA
ACTTTCACATCAACGGATACTGCCAAGATTTGACAAAACCATATTTACGT
TTAACTTCGGTGGGTAATATGTTTTAACCCCTTTTAACATGACATTTTCC
ATTTTACGTTAGATTTTTTTACAAGGTTCTGTAAAGGAAACATTGTTAAG
TTCTTACATAAATTTTAACATGCATGCAAAACTTACGGAAGGGTTTTAAG
TAGGTGCTTGCTTGCATTACACTTAGGGGAGACTAATAGTTAACTGGAAG
AGCTATCTTTGATTCCTAGTCATGTATGGTTTCAAATACATTACAGTTGA
TTTCTCGGTTCTATGATTTCCCCATTTTTCCTTCGCAGGCGCCTGATCCA
TCGACAGTCCGTCCCGTCAACATTTTGAAGAAGTCATTGGAACACGTCGA
AACGCAATGGAAGAAGAAGAACGACTACCATTTCGCTTGCGAACAGATGA
AGTCCATCCGTCAAGATTTGACCGTCCAAGGAATTGAAAACGAATTCACA
GTTACAGTATATGAAACCCACGCTAGAATTGCTCTCGAAAAAGTAAGTTT
TAGGCAGACATTCCCCTCTTCATAATTGTATCCCATCCTTTTTAAATATT
TTTAAGCCATTTAATATGACCCATCCTTTTATAATAACCACAACTTGNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTGTCTCTCTCTTTTTC
CAGGGTGATCGAGAGGAATTCAATCAATGCCAAACGTGTTTACGTAGGCT
TTACAGCAAAGGAATCAACGGTCAAGTAGCCGAGTTTACGGCCTACAGTA
TTCTCTACTATATTTACACAAAAAGCACTTTGGACTTAAATTCTTGTCTT
GCCTCACTGACCAAAGATCTGAAGAAAGACGCGCTTGTTCAACACGCCCT
GTCGGTGCGCTCTGCATTGGCACTAGATAATTATCGTTCATTTTTCAAGT
TTTATTTACAAGCACCAAAAATGGGTGGATCTCTCATTGACCTTTTTATA
GCTAGGGAACGTAAAGAAGCACTCAAACGGCTAGTGAAGGCGTAAGTATA
TAAACACCCCTCCCCTCCCCTTCTTTCTGAAACCAGCCAGCCTATCCTAG
AAATCAGTCGCCTTTCCTCACATCTAATGAGCAGTTTAAACTTATCTCTT
CAACCATTATCCTTTTAGTATATAAAGTCAACCCCATCTAAGCACATACA
TTTCTTTATAATTACCTCCTCTGTATAGTAGTACTGTTAACACATCCTGT
ATTTCTTTTTAAGGCACTTTAAGTGTTAAAATTTTCTTATTAAAAAAATC
TAAGCTCCCCATTGAGGATTTTTTAGCCAGTGGGCGACAGTATCGGTAAG
AATGTGATTGGATTTGGAGAAACTTCGACTTAAATATATGAGAATCTCAA
ATATCTTTACAAAACAATTTGCCCCAAAAAGTTTACTATTTTTCGCTGGG
ATAAATTCTCGGGACTCTGGGAATTTTTTCACCGATGCGCAGGTAAGTTT
TAACCCTCGGGATAGACCTTGAGACTAAATCTGTCCTCTGTAACTTCAGT
CCTTTACAAAGCTCAATCTACCTTTTCTCTGTATATTCATGTTTTTTTTT
CTTTCTTTTTCAACCGTGGTTGATAGGTATNATACCTTTTCTCTGTATAT
TCATGTTCATTTTATTTTCTTTTTCAACCGTGGTTGATAGGTATCGGCCA
AGTTTAAGTGTCGCACATATAACAACCCAATTAGCCTTCAAATCTGAAGA
CGAATGCCTCGCTTGGCTTCAAGAATTGAATATCACATTCCTTGCTAACG
ACCCCACTAAAGTTGATTGTAAAGCATCTGTTGTTACATAAGGGAGAGAG
CATACAGCTCGTTCGAGTTTTTTCATGGCTGTGAAAGTTGGTTGAGTGCC
TCATCCAATGAAAAGCAAAGGAGGAAAGAAGCCTGATTTTCATGTCAAGG
TCCTCTCATTTTACCAAGAAGGTTTTATTCGCACCCCCTACACGGTAGTA
GTAGTTCAGTCACTACACAAAAAGAGACTAAGCTTTAAAAAATGAAAAAT
AAGGTCCTGTTCATAGATCCTGCCCTATATCTTATCCTGTTCGCTGTGCT
GTCACTATGTCAATTCATCCTACATGGTGTTTCTACCTACCCTTTAATTC
AGTTAAATTTACAGCATTTTCAACACGTAGCACGCATTATATATGGTATC
CCTTATGAACTATATTATGAAAGTCACGGTAGGTTGGTGGTTCTTAATAA
ATGAACAGTAAATGGTTATTTCCTTGAAATTGAAAGGTTTGTAAGTCTCA
ATAAACCGAGTGCTATTGGAGCAGATTCAGACATTTCAAGTATTACAATA
TTAACATTGCATTTTACGGCAAGAAGAAATTGTTACGACTGCTCTATGCA
GCATGTCACAATGAAAGATATACAACAAACATGATTGGATACGATTTTGA
CAGTGCTTATATGCTTGTCAAATCGTACACAGAGCAAATAGACTGATACT
AGCTAGAGTTAGCTCTGTTTTGATGTCTTGGATTACCTAAGGAAAAACAA
TTCATGGAGAAATTTTGATGAAAATACTCTGATTTCGTTTTGTTTTATGA
TTAATTTTTTCACTAGATGTAGGCGGTATTGTTGCTTATATTTTATGAAT
TGTATTCATATGACATGACGACTTAAACCCTGGACCCTGTTCCCTTATCC
TTTTCCCCTGATCTTTTATAATGTCAATTTCAGTTTTGAATCTTTGTTAT
CGATTAGATGCTTGATTTGCACCCTGTTACGCCAGTTCCCCACTCTGACA
AAGACGATTACGAAATTGCAATTCCATTATTGTCTCTGCAGTCTTCTTTT
AGAGTTAGTTAGAATTCAGTGACAATCTTTTTGTATTTATTTTGTACAAA
TTGTATATATGATTTATGAAATTATTATTCTTTTTTCTTACTAAAAGATT
CAGATCTACGATTCGAAGAAATCGAACTCTCAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_039362XLOC_039362Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00062841-exon-scaffold_372-1575043694:316428..317464TCONS_00062841-exon-scaffold_372-1575043694:316428..317464Clytia hemisphaericaexon
TCONS_00062841-exon-scaffold_372-1575043694:315830..316025TCONS_00062841-exon-scaffold_372-1575043694:315830..316025Clytia hemisphaericaexon
TCONS_00062841-exon-scaffold_372-1575043694:315245..315359TCONS_00062841-exon-scaffold_372-1575043694:315245..315359Clytia hemisphaericaexon
TCONS_00062841-exon-scaffold_372-1575043694:314409..314622TCONS_00062841-exon-scaffold_372-1575043694:314409..314622Clytia hemisphaericaexon
TCONS_00062841-exon-scaffold_372-1575043694:313708..313890TCONS_00062841-exon-scaffold_372-1575043694:313708..313890Clytia hemisphaericaexon
TCONS_00062841-exon-scaffold_372-1575043694:313160..313556TCONS_00062841-exon-scaffold_372-1575043694:313160..313556Clytia hemisphaericaexon
TCONS_00062841-exon-scaffold_372-1575043694:312832..312915TCONS_00062841-exon-scaffold_372-1575043694:312832..312915Clytia hemisphaericaexon
TCONS_00062841-exon-scaffold_372-1575043694:310973..311176TCONS_00062841-exon-scaffold_372-1575043694:310973..311176Clytia hemisphaericaexon
TCONS_00062841-exon-scaffold_372-1575043694:308039..308961TCONS_00062841-exon-scaffold_372-1575043694:308039..308961Clytia hemisphaericaexon
TCONS_00062841-exon-scaffold_372-1575043694:306681..307974TCONS_00062841-exon-scaffold_372-1575043694:306681..307974Clytia hemisphaericaexon
TCONS_00062841-exon-scaffold_372-1510915933:316428..317464TCONS_00062841-exon-scaffold_372-1510915933:316428..317464Clytia hemisphaericaexon
TCONS_00062841-exon-scaffold_372-1510915933:315830..316025TCONS_00062841-exon-scaffold_372-1510915933:315830..316025Clytia hemisphaericaexon
TCONS_00062841-exon-scaffold_372-1510915933:315245..315359TCONS_00062841-exon-scaffold_372-1510915933:315245..315359Clytia hemisphaericaexon
TCONS_00062841-exon-scaffold_372-1510915933:314409..314622TCONS_00062841-exon-scaffold_372-1510915933:314409..314622Clytia hemisphaericaexon
TCONS_00062841-exon-scaffold_372-1510915933:313708..313890TCONS_00062841-exon-scaffold_372-1510915933:313708..313890Clytia hemisphaericaexon
TCONS_00062841-exon-scaffold_372-1510915933:313160..313556TCONS_00062841-exon-scaffold_372-1510915933:313160..313556Clytia hemisphaericaexon
TCONS_00062841-exon-scaffold_372-1510915933:312832..312915TCONS_00062841-exon-scaffold_372-1510915933:312832..312915Clytia hemisphaericaexon
TCONS_00062841-exon-scaffold_372-1510915933:310973..311176TCONS_00062841-exon-scaffold_372-1510915933:310973..311176Clytia hemisphaericaexon
TCONS_00062841-exon-scaffold_372-1510915933:308039..308961TCONS_00062841-exon-scaffold_372-1510915933:308039..308961Clytia hemisphaericaexon
TCONS_00062841-exon-scaffold_372-1510915933:306681..307974TCONS_00062841-exon-scaffold_372-1510915933:306681..307974Clytia hemisphaericaexon
TCONS_00062841-exon-scaffold_372-1491911889:316428..317464TCONS_00062841-exon-scaffold_372-1491911889:316428..317464Clytia hemisphaericaexon
TCONS_00062841-exon-scaffold_372-1491911889:315830..316025TCONS_00062841-exon-scaffold_372-1491911889:315830..316025Clytia hemisphaericaexon
TCONS_00062841-exon-scaffold_372-1491911889:315245..315359TCONS_00062841-exon-scaffold_372-1491911889:315245..315359Clytia hemisphaericaexon
TCONS_00062841-exon-scaffold_372-1491911889:314409..314622TCONS_00062841-exon-scaffold_372-1491911889:314409..314622Clytia hemisphaericaexon
TCONS_00062841-exon-scaffold_372-1491911889:313708..313890TCONS_00062841-exon-scaffold_372-1491911889:313708..313890Clytia hemisphaericaexon
TCONS_00062841-exon-scaffold_372-1491911889:313160..313556TCONS_00062841-exon-scaffold_372-1491911889:313160..313556Clytia hemisphaericaexon
TCONS_00062841-exon-scaffold_372-1491911889:312832..312915TCONS_00062841-exon-scaffold_372-1491911889:312832..312915Clytia hemisphaericaexon
TCONS_00062841-exon-scaffold_372-1491911889:310973..311176TCONS_00062841-exon-scaffold_372-1491911889:310973..311176Clytia hemisphaericaexon
TCONS_00062841-exon-scaffold_372-1491911889:308039..308961TCONS_00062841-exon-scaffold_372-1491911889:308039..308961Clytia hemisphaericaexon
TCONS_00062841-exon-scaffold_372-1491911889:306681..307974TCONS_00062841-exon-scaffold_372-1491911889:306681..307974Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_372supercontigscaffold_372:306681..317464 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	5.11767e-06	0	0	3.19978e-06	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.0700189	0	0	0	0	1.40632e-10	0
Blast
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BLAST of TCONS_00062841 vs. Swiss-Prot (Human)
Match: LENG8 (Leukocyte receptor cluster member 8 OS=Homo sapiens GN=LENG8 PE=1 SV=2)

HSP 1 Score: 278.87 bits (712), Expect = 1.792e-78
Identity = 147/257 (57.20%), Postives = 170/257 (66.15%), Query Frame = 1 
Query: 2035 DTEVTQKKQDRAARFQKDXXXXXXXXXXXLIPKGESPMDEDVD-MNFHINGYCQDLTKPYLRLTSAPDPSTVRPVNILKKSLEHVETQWKKKNDYHFACEQMKSIRQDLTVQGIENEFTVTVYETHARIALEKGDREEFNQCQTCLRRLYSKGINGQVAEFTAYSILYYIYTKSTLDLNSCLASLTKDLKKDALVQHALSVRSALALDNYRSFFKFYLQAPKMGGSLIDLFIARERKEALKRLVKA*VYKHPSPPLL 2802
            D E   KKQ RAARFQ    +        L          D D     I G C D+TK YLRLT APDPSTVRPV +LKKSL  V+  WK+K DY FACEQMKSIRQDLTVQGI  EFTV VYETHARIALEKGD EEFNQCQT L+ LY++ + G V EFTAY ILYYI+TK++ D+ + LA LT++LK D  V HAL++R+A AL NY  FF+ Y  AP M G L+D F  RERK ALK ++K  V      PLL
Sbjct:  465 DPERELKKQKRAARFQHGHSRRLRLEPLVLQMSSLESSGADPDWQELQIVGTCPDITKHYLRLTCAPDPSTVRPVAVLKKSLCMVKCHWKEKQDYAFACEQMKSIRQDLTVQGIRTEFTVEVYETHARIALEKGDHEEFNQCQTQLKSLYAENLPGNVGEFTAYRILYYIFTKNSGDITTELAYLTRELKADPCVAHALALRTAWALGNYHRFFRLYCHAPCMSGYLVDKFADRERKVALKAMIKTYVVPSSLLPLL 721
The following BLAST results are available for this feature:
BLAST of TCONS_00062841 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
LENG81.792e-7857.20Leukocyte receptor cluster member 8 OS=Homo sapien... [more]
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