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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00062793 ID=TCONS_00062793|Name=TCONS_00062793|organism=Clytia hemisphaerica|type=transcript|length=751bp
AAGGAAAGTCAAGACTCGTTAATCTCGTCAATGCAACATCAAACTTCTGG
GATTTGGACAACAtaatcaaattaaattcaaatcaaatcaatcttctTAA
CCAGTCAATTTCGAACCAGACTTTCCAATATCAATACTGGCGAAAGAAAC
AATCAAATATTATTGGAAACTCAGACGAAGTAATTGATTTGGTGACAAGG
TCTGTAGAATATAAAGGGAATACATTTGGTGTGGCCAAAACAGATGCTTC
TAATTATATCACACTGGTACCACTACTGTTTATTAAACGCTTTGACCAGG
ATGGAACTGGTGGTGATGGATATTCAAAACTGGAATATCGTGTTTACGAA
TATAACGAAGTTTTAAACCAAACTCAAACTGATATGATTAATAAATTGAC
TAAAACATTCGATTGCAAAATATAATACACAGCAAGCTCGTATCCAGTTC
CTTAGATCGCTTGTCTGATGATTCGGATAGTGTTAACAAAATGTTTGTAA
GACATCCATcagtaaatcaaaaataatgcaAGTGTCACTGGGTACGGGAT
TGGATACACAGTACAGTTGAGATATAAAATtcaaatacagggtgtccgga
aaaaagtatCAAGCTcaaacatgattctgagtagaaggtttttgcgtgtg
tttaacaaaatgtaacaaatatataccaacacaataattgtttttacaac
attCATTGTAAATTGATTAaaataattaactttttttacaattttcatga
c Run BLAST on NCBI transcript from alignment at scaffold_372:80925..82202+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00062793 ID=TCONS_00062793|Name=TCONS_00062793|organism=Clytia hemisphaerica|type=transcript|length=1278bp|location=Sequence derived from alignment at scaffold_372:80925..82202+ (Clytia hemisphaerica)
AAGGAAAGTCAAGACTCGTTAATCTCGGTAAGTTTATTCACTCACAGGAT
AAGAATCTAACTGTTTTAGACACTTTGGTAAGGTACAAATTTATTCCGGA
TTATAATTTCCAGCGTAGTGttttaaaatgaagaaaaaaaaatagaccTT
TCACAAATAACATCAACTTGCATCGAGTTCGAAGTAATTTTATGACAACT
TCTACCTAAAAGATTATTTCAATTGCGCAATATTTTTTATGTACCATAAa
tatcacagctcgaataaatatcGACCTCTGAAGACGAGGTTTTTAtaata
caagatcttgtattaaAACGCTCGCAAAGTAGATATATTTCAGCATTTGG
CTTAGATGAGGCTTGTGAATCATGTTTGATTTGCTTTTTTAGACAAGTGg
tgagaaaatgaaaacttggcctctggtaCCCAGGGTACTTTTTATTATCG
TTTCAAATTGACGGAAGTGTTGGGTGATTTATCTCGAGAAGTGTGTATTA
GTTACAGTAATTTCATAAACCATTTTTCTCTAGATCTTAATCAATTCACC
TTAGTCAATGCAACATCAAACTTCTGGGATTTGGACAACAtaatcaaatt
aaattcaaatcaaatcaatcttctTAACCAGTCAATTTCGAACCAGACTT
TCCAATATCAATACTGGCGAAAGAAACAATCAAATATTATTGGAAACTCA
GACGAAGTAATTGATTTGGTGACAAGGTCTGTAGAATATAAAGGGAATAC
ATTTGGTGTGGCCAAAACAGATGCTTCTAATTATATCACACTGGTACCAC
TACTGTTTATTAAACGCTTTGACCAGGATGGAACTGGTGGTGATGGATAT
TCAAAACTGGAATATCGTGTTTACGAATATAACGAAGTTTTAAACCAAAC
TCAAACTGATATGATTAATAAATTGACTAAAACATTCGATTGCAAAATAT
AATACACAGCAAGCTCGTATCCAGTTCCTTAGATCGCTTGTCTGATGATT
CGGATAGTGTTAACAAAATGTTTGTAAGACATCCATcagtaaatcaaaaa
taatgcaAGTGTCACTGGGTACGGGATTGGATACACAGTACAGTTGAGAT
ATAAAATtcaaatacagggtgtccggaaaaaagtatCAAGCTcaaacatg
attctgagtagaaggtttttgcgtgtgtttaacaaaatgtaacaaatata
taccaacacaataattgtttttacaacattCATTGTAAATTGATTAaaat
aattaactttttttacaattttcatgac
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00062793-exon-scaffold_372-1491911889:80925..80951 | TCONS_00062793-exon-scaffold_372-1491911889:80925..80951 | Clytia hemisphaerica | exon |
| TCONS_00062793-exon-scaffold_372-1510915933:80925..80951 | TCONS_00062793-exon-scaffold_372-1510915933:80925..80951 | Clytia hemisphaerica | exon |
| TCONS_00062793-exon-scaffold_372-1575043694:80925..80951 | TCONS_00062793-exon-scaffold_372-1575043694:80925..80951 | Clytia hemisphaerica | exon |
| TCONS_00062793-exon-scaffold_372-1491911889:81479..82202 | TCONS_00062793-exon-scaffold_372-1491911889:81479..82202 | Clytia hemisphaerica | exon |
| TCONS_00062793-exon-scaffold_372-1510915933:81479..82202 | TCONS_00062793-exon-scaffold_372-1510915933:81479..82202 | Clytia hemisphaerica | exon |
| TCONS_00062793-exon-scaffold_372-1575043694:81479..82202 | TCONS_00062793-exon-scaffold_372-1575043694:81479..82202 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_372 | supercontig | scaffold_372:80925..82202 + |
Blast
The following BLAST results are available for this feature:
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