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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00062774 ID=TCONS_00062774|Name=TCONS_00062774|organism=Clytia hemisphaerica|type=transcript|length=1018bp
CTTTAAAATATAAGCTTTTTTAATGTAAACTCTactttaaaaaccttttt
tcaaactctttattaaaaatattttctttaattttttattgaaacaggAA
AGATGGATAAATCCAtcattttggtcaaaaaatgatTGGTATAATGcatc
atttttcagaaaatagttCTTTTCTATCAATGTTTTTAATGAGAccaaaa
aagtcaagtctatcTGTCCCATGGGGAACAGTCAGAGGCCTTTAGATAAT
ATCCCAAAGATCAAACATATCTTCATCAGGTGGCAAATGTTTGGGGTGTC
TTCTAAAAGGGTTCCCTTGGTTTTAAACAGGTTATTAACAAGCTTATCTA
TGATTCCATTCTTTTCCTCTAAGAATCTTCTTTTGACTTTTGCAATGTAA
agggttttgttttttttgccatTGAAAATAACAGCAAACCATTTCCCAAC
AATTTCATCCTCTTTGACAGGCCAACTGAATGACAACCAGACTCTACTCA
GTGTAATTACTTCACTTTCGTCTTCATCAacctcatcttcatcttcatca
tcttcAAGGAAATCATCATCACTTTTACCATCATGAATAGGTTTTCTTTT
AGTCCCTTTGTTATTGGCTGAATGATTAGCTGCAGCTCCAAGAATCATCT
GTGGACACTTCCCATCAATTCTACAGCCAGCTTTGCTGCATACAGAGGGA
AGGATGTTGTGGCAGTTTCGAATTCTTTCAAGCTGGCAGCTTCACACTTT
GATTGCATGTACACGCGTATTGTCTTACATTTATAAAAACACTCTCTTTA
CTGCCTCTTCCTTTCACTATTTGCTTCTTTTGCTTGAGCTTTCTCCTCCT
TTTCCTTCTTCAAACTTTCCACAACTTACAATACATCTTTCCCCTCCATT
GAACCACAAATTTGTGTCCCTCTCAAGTTCTCAACATTCTTTTACGGCTT
CACCTTTGCAATAGGTAAAAGACCAAGAACTTCTTCAAGCTTCAAGGACC
TCTTGCTGGCTTCTCGAT Run BLAST on NCBI protein sequence of TCONS_00062774-protein >TCONS_00062774-protein ID=TCONS_00062774-protein|Name=TCONS_00062774-protein|organism=Clytia hemisphaerica|type=polypeptide|length=138bp
MILGAAANHSANNKGTKRKPIHDGKSDDDFLEDDEDEDEVDEDESEVITL
SRVWLSFSWPVKEDEIVGKWFAVIFNGKKNKTLYIAKVKRRFLEEKNGII
DKLVNNLFKTKGTLLEDTPNICHLMKICLIFGILSKGL Run BLAST on NCBI transcript from alignment at scaffold_371:328675..329692 Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00062774 ID=TCONS_00062774|Name=TCONS_00062774|organism=Clytia hemisphaerica|type=transcript|length=1018bp|location=Sequence derived from alignment at scaffold_371:328675..329692 (Clytia hemisphaerica)
ATCGAGAAGCCAGCAAGAGGTCCTTGAAGCTTGAAGAAGTTCTTGGTCTT
TTACCTATTGCAAAGGTGAAGCCGTAAAAGAATGTTGAGAACTTGAGAGG
GACACAAATTTGTGGTTCAATGGAGGGGAAAGATGTATTGTAAGTTGTGG
AAAGTTTGAAGAAGGAAAAGGAGGAGAAAGCTCAAGCAAAAGAAGCAAAT
AGTGAAAGGAAGAGGCAGTAAAGAGAGTGTTTTTATAAATGTAAGACAAT
ACGCGTGTACATGCAATCAAAGTGTGAAGCTGCCAGCTTGAAAGAATTCG
AAACTGCCACAACATCCTTCCCTCTGTATGCAGCAAAGCTGGCTGTAGAA
TTGATGGGAAGTGTCCACAGATGATTCTTGGAGCTGCAGCTAATCATTCA
GCCAATAACAAAGGGACTAAAAGAAAACCTATTCATGATGGTAAAAGTGA
TGATGATTTCCTTgaagatgatgaagatgaagatgaggtTGATGAAGACG
AAAGTGAAGTAATTACACTGAGTAGAGTCTGGTTGTCATTCAGTTGGCCT
GTCAAAGAGGATGAAATTGTTGGGAAATGGTTTGCTGTTATTTTCAatgg
caaaaaaaacaaaaccctTTACATTGCAAAAGTCAAAAGAAGATTCTTAG
AGGAAAAGAATGGAATCATAGATAAGCTTGTTAATAACCTGTTTAAAACC
AAGGGAACCCTTTTAGAAGACACCCCAAACATTTGCCACCTGATGAAGAT
ATGTTTGATCTTTGGGATATTATCTAAAGGCCTCTGACTGTTCCCCATGG
GACAgatagacttgacttttttggTCTCATTAAAAACATTGATAGAAAAG
aactattttctgaaaaatgatgCATTATACCAatcattttttgaccaaaa
tgaTGGATTTATCCATCTTTcctgtttcaataaaaaattaaagaaaatat
ttttaataaagagtttgaaaaaaggtttttaaagtAGAGTTTACATTAAA
AAAGCTTATATTTTAAAG Coding sequence (CDS) from alignment at scaffold_371:328675..329692 >TCONS_00062774 ID=TCONS_00062774|Name=TCONS_00062774|organism=Clytia hemisphaerica|type=CDS|length=417bp|location=Sequence derived from alignment at scaffold_371:328675..329692 (Clytia hemisphaerica)
ATGATTCTTGGAGCTGCAGCTAATCATTCAGCCAATAACAAAGGGACTAA
AAGAAAACCTATTCATGATGGTAAAAGTGATGATGATTTCCTTgaagatg
atgaagatgaagatgaggtTGATGAAGACGAAAGTGAAGTAATTACACTG
AGTAGAGTCTGGTTGTCATTCAGTTGGCCTGTCAAAGAGGATGAAATTGT
TGGGAAATGGTTTGCTGTTATTTTCAatggcaaaaaaaacaaaaccctTT
ACATTGCAAAAGTCAAAAGAAGATTCTTAGAGGAAAAGAATGGAATCATA
GATAAGCTTGTTAATAACCTGTTTAAAACCAAGGGAACCCTTTTAGAAGA
CACCCCAAACATTTGCCACCTGATGAAGATATGTTTGATCTTTGGGATAT
TATCTAAAGGCCTCTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00062774-exon-scaffold_371-1491911889:328675..329692 | TCONS_00062774-exon-scaffold_371-1491911889:328675..329692 | Clytia hemisphaerica | exon |
| TCONS_00062774-exon-scaffold_371-1510915933:328675..329692 | TCONS_00062774-exon-scaffold_371-1510915933:328675..329692 | Clytia hemisphaerica | exon |
| TCONS_00062774-exon-scaffold_371-1575043694:328675..329692 | TCONS_00062774-exon-scaffold_371-1575043694:328675..329692 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_371 | supercontig | scaffold_371:328675..329692 . |
Blast
The following BLAST results are available for this feature:
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