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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00062767 ID=TCONS_00062767|Name=TCONS_00062767|organism=Clytia hemisphaerica|type=transcript|length=1232bp
TAAAATTAACAGATGTTTTTTTACTCCCAGTTATGTAGAAGGATCTTGCT
TTTTACGATGTAAAACTAAGGTAAACATAGTTTCCTGGGGGTTAAGAACT
CCCTCCTAAATAATCAAACCTTCCTAAAGGGatataaatttttgatgaaa
ccCCCCTAAAAAATCAAGGGGTTAAGATTCCATCCtgtttacatattttt
ttcagtgggcaaaaactttgagatttttcaaCCCAACATAGGGGGTATCT
ATGTTGAGGAAGTCAGCTTTTCCATCCAAGGGGGGTACCCCTCAAAAATC
TAATCTCCTCCTAAGCACTTTTGAGAATAAAGAATGTTAACGTCCCATca
tcgaaagcagccggcgaggcgaccttttttccgatgtgttctgagagtat
gTTTTCATCTAGAAATTTCGATTCGTTCTGATACGATcttgaaaattaat
cagctagaaataatgatgtgttctgacgagacagggatATAATCAAGTCA
TCAaatgtgttcttgttgtctaggtaaccctagaaagcttcagaacacat
cttttaaggagacagggggtataatcaagagaaaattgacGTGATATTca
tgttgcctagtaaccctggaaagtttcagaacacatctttcgtggaaaaa
aaaatatcttacaagtatatcttggaaaaatgtttttcctagattttaga
acacatccaaCCATAAAGTAGTAATACGGTATATAAAGTTTAGGGAGACA
CATAGTGCGAttaaggtttcctagaaatcagaacatatcatttgtataag
aaaattgaaggtcatatcatgtggtctcctagaagataagaacacatatt
tctgaaaaatctcTCCACCGGCTGCTTCTGCCCAAtatgttccaaaattt
ttgatggGGCAGATGGAGCCATGGCATTGCAATAAAAACTGTGTAGtcca
ctttgaaaaagtaaccggttgtTAGCAGTAGAAAATAACAGTGATGCTGG
TGGTACCTTTCcattttccattatttttcttttcactgGGTATTTCAAGC
TTTCAAGAAATCCATCGTCTATAAACAGAGCATATCAACAAACTTAAGCA
CACAAACTTGGGAAAAGAAAGTTTTGTGAAGTAAATATCACAACAAAATT
CGatataaagtttgaaaaaaaatctaaaaaattcaataaagcttttaaaa
acatttgtgAATCACGAATTAGATATAATTTG Run BLAST on NCBI transcript from alignment at scaffold_371:100239..101470 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00062767 ID=TCONS_00062767|Name=TCONS_00062767|organism=Clytia hemisphaerica|type=transcript|length=1232bp|location=Sequence derived from alignment at scaffold_371:100239..101470 (Clytia hemisphaerica)
CAAATTATATCTAATTCGTGATTcacaaatgtttttaaaagctttattga
attttttagattttttttcaaactttatatCGAATTTTGTTGTGATATTT
ACTTCACAAAACTTTCTTTTCCCAAGTTTGTGTGCTTAAGTTTGTTGATA
TGCTCTGTTTATAGACGATGGATTTCTTGAAAGCTTGAAATACCcagtga
aaagaaaaataatggaaaatgGAAAGGTACCACCAGCATCACTGTTATTT
TCTACTGCTAacaaccggttactttttcaaagtggaCTACACAGTTTTTA
TTGCAATGCCATGGCTCCATCTGCCccatcaaaaattttggaacataTTG
GGCAGAAGCAGCCGGTGGAgagatttttcagaaatatgtgttcttatctt
ctaggagaccacatgatatgaccttcaattttcttatacaaatgatatgt
tctgatttctaggaaaccttaaTCGCACTATGTGTCTCCCTAAACTTTAT
ATACCGTATTACTACTTTATGGttggatgtgttctaaaatctaggaaaaa
catttttccaagatatacttgtaagatatttttttttccacgaaagatgt
gttctgaaactttccagggttactaggcaacatgAATATCACgtcaattt
tctcttgattataccccctgtctccttaaaagatgtgttctgaagctttc
tagggttacctagacaacaagaacacattTGATGACTTGATTATatccct
gtctcgtcagaacacatcattatttctagctgattaattttcaagATCGT
ATCAGAACGAATCGAAATTTCTAGATGAAAAcatactctcagaacacatc
ggaaaaaaggtcgcctcgccggctgctttcgatgATGGGACGTTAACATT
CTTTATTCTCAAAAGTGCTTAGGAGGAGATTAGATTTTTGAGGGGTACCC
CCCTTGGATGGAAAAGCTGACTTCCTCAACATAGATACCCCCTATGTTGG
GttgaaaaatctcaaagtttttgcccactgaaaaaaatatgtaaacaGGA
TGGAATCTTAACCCCTTGATTTTTTAGGGGggtttcatcaaaaatttata
tCCCTTTAGGAAGGTTTGATTATTTAGGAGGGAGTTCTTAACCCCCAGGA
AACTATGTTTACCTTAGTTTTACATCGTAAAAAGCAAGATCCTTCTACAT
AACTGGGAGTAAAAAAACATCTGTTAATTTTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00062767-exon-scaffold_371-1491911889:100239..101470 | TCONS_00062767-exon-scaffold_371-1491911889:100239..101470 | Clytia hemisphaerica | exon |
| TCONS_00062767-exon-scaffold_371-1510915933:100239..101470 | TCONS_00062767-exon-scaffold_371-1510915933:100239..101470 | Clytia hemisphaerica | exon |
| TCONS_00062767-exon-scaffold_371-1575043694:100239..101470 | TCONS_00062767-exon-scaffold_371-1575043694:100239..101470 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_371 | supercontig | scaffold_371:100239..101470 . |
Blast
The following BLAST results are available for this feature:
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