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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00062763 ID=TCONS_00062763|Name=TCONS_00062763|organism=Clytia hemisphaerica|type=transcript|length=1344bp
CAAAAAGAAACagtagaaaaaaatgaacatgtATGAAATATTTGGCATTC
TACTCGTGGTGAAATGTCATCTTTCATTGGGAAAAGAACGAATTAAACAT
AAATGTACTATATCATATAGAGGTGAGCCGTTTTGTGAATACACTGAAGG
AGACTGTCAATCACGTATTGTTATCAATTCACCACACGGTGGAGATTTAC
AGCCACCTGATGTCCCAGAGCGTGACGGAGGGTGTTTTGTTGACGGGAAA
TGTAAATGGGAGCATTTTTGTTCACCGAAGAATGTTAAGAAATGTCCTGG
AATTGTTGAAGTTACAAATGATGATCATACACAAACTATTACAAGATATA
TTGTCAATTTTATTAAAGATTTAACAGGAGCTAGACCTCATTTCACCAGG
AATAACTTACATCGAAGCCGCATAGATGCGAATCGGGAAATTCACGAATC
GACTTATGATTTCCCGAGCATGGTTGAGACTTATGGTGAATATCATGAAA
TCATTCAAAAGGCATGTGATAAAATCCAGGGACCCGGTATCTTCATTGAT
ATGCACGGACATACCGGGCAAGACTTTACAAACCCGTTTTTTGTTCTTGG
TTATAATATCGAGCAGGTAGACTTTGCCAATGAAACATTAACAGATTCTA
GCGAATGTACGATAAAGAATCTTATAAAACGTTCAGAGAGTTCTATGGAA
GAGATTATAAGAGGTGAAAAAAGTCTGGGTTATTTTTTAGCCGATAAGGG
CTATACCCGCGTGATGCCTAGTCCGGCTGTTAAAGACCCTTCTAAATACA
TGGGTTATTTTAAAGGAGGTTATAATGTACAAAAGTACGGGTCTATAGAC
GGTGGAGAAATTGATGCAATACAAATTGAAATTCATGCTTATTATaataa
tgagaaaaaaaaagtggcaaaaataatAGCAGAATCTATCATTGAATGGA
CTAATTTACATTATGGGAATCTTCCGAAGCAAGATTGCTCCGTTGACAGT
GAAGATGACTCGAGTTcttgacggaaaaaaaatattgaattttacCAACG
AAAAAAGTATTTGAAGGTGCTTTTGTAAAATGCTGATATTGCAGTCGCTG
TACCTGCCGTACTTATGCCTGACTCTACAACTTGAAGGATGTCTATGGGG
AAATTTCAATGGTGTAAAAAGTGGGAATCAAGGTGTATATGTATGTAATG
TATAATCATTTTTATAATGTTAAAAAGACATTGCattgggaacttgaact
tgacGGTGTTTTTGCCGTACCTGCCGTAACCGATTTGTCGTACCTGGATA
TTTTTACACTTTAAATTAATTGCACTAAAATAAtaatcatgaaa Run BLAST on NCBI protein sequence of TCONS_00062763-protein >TCONS_00062763-protein ID=TCONS_00062763-protein|Name=TCONS_00062763-protein|organism=Clytia hemisphaerica|type=polypeptide|length=332bp
MNMYEIFGILLVVKCHLSLGKERIKHKCTISYRGEPFCEYTEGDCQSRIV
INSPHGGDLQPPDVPERDGGCFVDGKCKWEHFCSPKNVKKCPGIVEVTND
DHTQTITRYIVNFIKDLTGARPHFTRNNLHRSRIDANREIHESTYDFPSM
VETYGEYHEIIQKACDKIQGPGIFIDMHGHTGQDFTNPFFVLGYNIEQVD
FANETLTDSSECTIKNLIKRSESSMEEIIRGEKSLGYFLADKGYTRVMPS
PAVKDPSKYMGYFKGGYNVQKYGSIDGGEIDAIQIEIHAYYNNEKKKVAK
IIAESIIEWTNLHYGNLPKQDCSVDSEDDSSS Run BLAST on NCBI transcript from alignment at scaffold_371:29188..30531 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00062763 ID=TCONS_00062763|Name=TCONS_00062763|organism=Clytia hemisphaerica|type=transcript|length=1344bp|location=Sequence derived from alignment at scaffold_371:29188..30531 (Clytia hemisphaerica)
tttcatgattaTTATTTTAGTGCAATTAATTTAAAGTGTAAAAATATCCA
GGTACGACAAATCGGTTACGGCAGGTACGGCAAAAACACCgtcaagttca
agttcccaatGCAATGTCTTTTTAACATTATAAAAATGATTATACATTAC
ATACATATACACCTTGATTCCCACTTTTTACACCATTGAAATTTCCCCAT
AGACATCCTTCAAGTTGTAGAGTCAGGCATAAGTACGGCAGGTACAGCGA
CTGCAATATCAGCATTTTACAAAAGCACCTTCAAATACTTTTTTCGTTGg
taaaattcaatattttttttccgtcaagAACTCGAGTCATCTTCACTGTC
AACGGAGCAATCTTGCTTCGGAAGATTCCCATAATGTAAATTAGTCCATT
CAATGATAGATTCTGCTattatttttgccactttttttttctcattattA
TAATAAGCATGAATTTCAATTTGTATTGCATCAATTTCTCCACCGTCTAT
AGACCCGTACTTTTGTACATTATAACCTCCTTTAAAATAACCCATGTATT
TAGAAGGGTCTTTAACAGCCGGACTAGGCATCACGCGGGTATAGCCCTTA
TCGGCTAAAAAATAACCCAGACTTTTTTCACCTCTTATAATCTCTTCCAT
AGAACTCTCTGAACGTTTTATAAGATTCTTTATCGTACATTCGCTAGAAT
CTGTTAATGTTTCATTGGCAAAGTCTACCTGCTCGATATTATAACCAAGA
ACAAAAAACGGGTTTGTAAAGTCTTGCCCGGTATGTCCGTGCATATCAAT
GAAGATACCGGGTCCCTGGATTTTATCACATGCCTTTTGAATGATTTCAT
GATATTCACCATAAGTCTCAACCATGCTCGGGAAATCATAAGTCGATTCG
TGAATTTCCCGATTCGCATCTATGCGGCTTCGATGTAAGTTATTCCTGGT
GAAATGAGGTCTAGCTCCTGTTAAATCTTTAATAAAATTGACAATATATC
TTGTAATAGTTTGTGTATGATCATCATTTGTAACTTCAACAATTCCAGGA
CATTTCTTAACATTCTTCGGTGAACAAAAATGCTCCCATTTACATTTCCC
GTCAACAAAACACCCTCCGTCACGCTCTGGGACATCAGGTGGCTGTAAAT
CTCCACCGTGTGGTGAATTGATAACAATACGTGATTGACAGTCTCCTTCA
GTGTATTCACAAAACGGCTCACCTCTATATGATATAGTACATTTATGTTT
AATTCGTTCTTTTCCCAATGAAAGATGACATTTCACCACGAGTAGAATGC
CAAATATTTCATacatgttcatttttttctactGTTTCTTTTTG Coding sequence (CDS) from alignment at scaffold_371:29188..30531 >TCONS_00062763 ID=TCONS_00062763|Name=TCONS_00062763|organism=Clytia hemisphaerica|type=CDS|length=999bp|location=Sequence derived from alignment at scaffold_371:29188..30531 (Clytia hemisphaerica)
tcaagAACTCGAGTCATCTTCACTGTCAACGGAGCAATCTTGCTTCGGAA
GATTCCCATAATGTAAATTAGTCCATTCAATGATAGATTCTGCTattatt
tttgccactttttttttctcattattATAATAAGCATGAATTTCAATTTG
TATTGCATCAATTTCTCCACCGTCTATAGACCCGTACTTTTGTACATTAT
AACCTCCTTTAAAATAACCCATGTATTTAGAAGGGTCTTTAACAGCCGGA
CTAGGCATCACGCGGGTATAGCCCTTATCGGCTAAAAAATAACCCAGACT
TTTTTCACCTCTTATAATCTCTTCCATAGAACTCTCTGAACGTTTTATAA
GATTCTTTATCGTACATTCGCTAGAATCTGTTAATGTTTCATTGGCAAAG
TCTACCTGCTCGATATTATAACCAAGAACAAAAAACGGGTTTGTAAAGTC
TTGCCCGGTATGTCCGTGCATATCAATGAAGATACCGGGTCCCTGGATTT
TATCACATGCCTTTTGAATGATTTCATGATATTCACCATAAGTCTCAACC
ATGCTCGGGAAATCATAAGTCGATTCGTGAATTTCCCGATTCGCATCTAT
GCGGCTTCGATGTAAGTTATTCCTGGTGAAATGAGGTCTAGCTCCTGTTA
AATCTTTAATAAAATTGACAATATATCTTGTAATAGTTTGTGTATGATCA
TCATTTGTAACTTCAACAATTCCAGGACATTTCTTAACATTCTTCGGTGA
ACAAAAATGCTCCCATTTACATTTCCCGTCAACAAAACACCCTCCGTCAC
GCTCTGGGACATCAGGTGGCTGTAAATCTCCACCGTGTGGTGAATTGATA
ACAATACGTGATTGACAGTCTCCTTCAGTGTATTCACAAAACGGCTCACC
TCTATATGATATAGTACATTTATGTTTAATTCGTTCTTTTCCCAATGAAA
GATGACATTTCACCACGAGTAGAATGCCAAATATTTCATacatgttcat
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00062763-exon-scaffold_371-1491911889:29188..30531 | TCONS_00062763-exon-scaffold_371-1491911889:29188..30531 | Clytia hemisphaerica | exon |
| TCONS_00062763-exon-scaffold_371-1510915933:29188..30531 | TCONS_00062763-exon-scaffold_371-1510915933:29188..30531 | Clytia hemisphaerica | exon |
| TCONS_00062763-exon-scaffold_371-1575043694:29188..30531 | TCONS_00062763-exon-scaffold_371-1575043694:29188..30531 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_371 | supercontig | scaffold_371:29188..30531 . |
Blast
The following BLAST results are available for this feature:
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