TCONS_00062759 (transcript) - C. hemisphaerica

Overview
NameTCONS_00062759
Unique NameTCONS_00062759
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2262

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00062759 ID=TCONS_00062759|Name=TCONS_00062759|organism=Clytia hemisphaerica|type=transcript|length=2262bp
GGCTAATCAACTTAGTGGATGAAAGTGAGTGGCTGAGCAGGTTGTGGGAA
TCCTGGCATGTCATCAAATCAATCTTTGGTTATGCAACTTCAGCACGCAA
CACAAATGTCCAATATCACTGGAACTGCAACAACAGCGACTTCATCATCA
ACACAACCAGGGGCCACTGATacacaacaacagcaacaacaacagcaaac
AAATACTGCCACACCTTTGACAGAGTACACTATGTACCACCATTTACCAT
CTACAGTCATGAACCAACAAAATAATACAGATGATGGAGATGGTGCTGGT
TCATACGATGACAGCCCACGTGAAATGAGAGAACAAGAATTAAGGGAACA
AGACCGTTTTCTACCCATCGCCAATGTGGCTCGAATTATGAAACGTGGTG
TCCCTGAGACAGGAAAGATTGCAAAAGATGCCAAGGAGTGTGTTCAAGAA
TGTGTATCAGAGTTCATCAGTTTCATCACTAGCGAAGCAAGCGAACGATG
TCAAcaagaaaaacgaaaaacaatTAATGGAGAAGACATCTTGTTTGCAA
TGACAACCCTAGGTTTCGATAATTACGTTGAGCCTTTGAAAGTTTACTTG
ACCAAATATCGAGAGAGTTTGAAAGGCGAGAAAGTTTTGAACGTTGCGGA
ATATGCTCACCATGTAGATAGCGAAGAACAAGCCAGTGGATTATCGGCTA
TACAATATCAAATCGCTGGTAGCAACCTTCATCCGAGCATGGTTTCTGCT
GATGGAACACCGTACGCTGCGTACACTCAAGCTCAAATTAATCAAGTCAA
TTCACAGATTCAATTCAACACGTGACAAGAAAAATCTATGAACATGTAAA
TTTGGATCAATCACAGAGAAGCTACCAGTTTGGGGATATTTGCAGTGAAG
TTGCCACAAGGGGGTTGTTGTGTTTGATATGGATGGAGGATGGGATGGTT
AACGTGTCAAAGCTTTACAACAAAAGCTAGTTTTAAGCAAGACTCGATTA
TCATCATAACAACTTTAATGTCTTCAGGCCCAAAAACAATCTGTTGTGTG
TCCAATTGTCAACTTGACGTATGTCGGACATTTTTAGAAGGAAGTTAGTC
CACCTAAAATATAGTATAGATCTTTGCGTCGCCTGGCAGAATCGCCCAAG
TAACAAATATTTATGCCCCCATAGATATTTCTAGGTTTTTCTCGGACGCT
CCGGATTTTTTAAACATCTCAAGATCCATATAGAATACAAATCAAAAGGT
TCAAGCTGTCCGCAGTAATTTACATGCCCACCTATTTTGCGTTATTATTT
TGCCACGTAAATGTGagcaaatttatttatttttaaacttaTTCATCGtt
tttagatgttttttttttgtaaataatcaAACTACAACGTACCTTACTTT
AATAGTTAGAAGTGAAATACAGTTTATCAGTTAAATTCTAAGTGACTAAC
GTTTCTAACGTCGTTTTGCATAATATTCCACTTCCCGCTCTAAGATTCTC
CTGACTTTCCGGGATTTTTCCGCTATTTTACCCACGAGAACCGACGTGAG
ATTGGAAAcggttttttaaaaatcttttgttcaCTTTTGAAACTGtctaa
ctttccgaagctcatttttcaactacccagagtcctggtctttttccgct
agaaaagttGAATCTTATGCCAAATGACGGTAATAATATGATCTGTTATA
TTTTGTTTGGCTCAATTACTGTACTAGTTCAGGCATTTCACAACTTTAGA
ACAATCACAATgatcaaaatttcgaaagaaAGAGAACAAAGCCAAAGGTT
TCTTACAgtgtaaaaatatatatattgcaaataatttcaaaaaaataact
aTTATAATTcaatataattaaaaaaaaaactattttacaTGTTACATTTA
GATTTTCTCACAATCGTTGTTTTTGAAATTGGCTAGGtcaactgaaatat
tttaaagCTTTAGCGGTCTTGTCTAAAATAAAGTCGGTACGATCTCAACA
ATTGTAATTTTCGGGTACTACTTTTGTCGGGTTGCACGAAAGCGACGTTT
ATGTAAGTTTCCATTTGGGATCCCTGTTTAACATCTTCCAAATCCTTGCt
tcttcaaacaaaagaaaagaggcCTTGTTCTTCCCCTCCAAATTCTTCGT
CCTGCAAAACTGTTTGAATACGCATTCGCTGTTCCACTTTTTGATAGAGT
TCAAATGATATTTCTTCTTCGGAAAGAAAGCTCAAAATTCCTTTGGCGCC
CTGTAAATGGCA
Run BLAST on NCBI

transcript from alignment at scaffold_371:551935..560437-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00062759 ID=TCONS_00062759|Name=TCONS_00062759|organism=Clytia hemisphaerica|type=transcript|length=8503bp|location=Sequence derived from alignment at scaffold_371:551935..560437- (Clytia hemisphaerica)
GGCTAATCAACTTAGTGGATGAAAGTGAGTGGCTGAGCAGGTTGTGGGTA
AATTTAAATTCTTTTTTATGATTTCTCGGAAATAATAAACAAGCACATGT
TAAACACATGTTTACTTCATTGCCTAACCCTGAACAAGTTCACCCCATTA
GTTCAATCCATCTCTGACATGTCTTTCTCATGACTGATGACCTGCAGAAA
TCCAAACCTCTTCTCCCCAAAACAGCAGAGACTGCTATAAGACTGCTAAG
GTCTATTCAGGGTGTTCAGCACTTACATACTTTTTCACCCAACGTTAATT
TGGTGGTGGGAAACTGAAACCCAATTTCAAATTGATGGTACAAAATTTTG
AAGAAAAATCAACTCAAGTAGATGTTTTGGGCTATTCCAAAATGATATAT
ATACAAGAGTATTGGCAAACTTTTTTCACCTGCCCTCCCCCTGAAATTTT
GAATGACAAATTATCCCGCCTTGAAATCTAGGATATACCATGAAGTCGGG
TAACTTGCATCAGTGGAGGCTAACATGCATAGCCCTCAAATGAATGACCT
GTCTGGTCCTTAAAATACAAAGTTAAATCTAAAGAAAAATGGTAGAGTAA
AGCTGGAAGCGAAACTGCGTAGTTCTTGTTGTTTTGAAATTTTGCTGCTT
TGATTGGTTAGTCATTTGAGGGCTATGCATCATGTGAACCTCCACTGATG
CAAGTTACCCAACTTCATGGTAGTATCCTGTCAGTCCTGTGGAAGTTGAA
ATTTTGTGAAAAAGGGGCTGGAAAACAACTATTGATGTCATTTTATGAAG
AGGGCTCTCTAGAGAGAAAGCCCTGAGAAATTGCTGAGATATCATATTAT
TTCCATGAATTATACACACATAGAAAAATATTGAACCCCCCTCCCCCTTA
AAAAAAAAAAAAGGAAAAAAGTTTTGATTAGTAACTGGGCATAAAATGAC
CAATCAGACACGATTGCATATGCATACGAGTGATATAGGTTCACGTTCTG
GAAATCCAGCTTAAACAATGGCAGGCGAAATTTGAAATAACAGCATTGAA
ACTCAACTTTTAAGAATTTTTTTTGTTGTATTACCATAGGCTGTTCCAGA
TAATTTTTCAAGCAGAACAAGTTAACTTTTTTCAAAATGAAAAGATATTT
TCACCCAGCCAAAAATCAGATGACAGAACAGACTAGAAATGTAGATGTTG
TTAGAAAAATGCAATGCCATTTTGTGTATAATAATTTTTAAAAATTCCAA
TGCCTCAAGGAGGCCTCCACAAGCGCTTTTCGGGATGACGTGATAGGGAC
TTTTTGCAGCGTGATTATGTGATTTAGAAATTTTTTCTTTGTGATTGCGT
GATGAGAGGTCAAAACGTGTGATTTGAAAGATTTTAAGCTGCGTGATACG
TGAATTGGACTTTTTCAAAGGGATGCATGATTGTCCAATTTTCTTTTGCT
GATTTGCCTGTTTGTGATTGCCTGAGGTTAAATAATTGTGTGATATCGTG
ATCAGAGTTACCGCTGGGGAGCCTCCTCAAGCATCAATGATAAAAATACT
TAGTATGTTCATTCACTAGTTACGATTCTGGGTGTTATTGTGTGATTCTG
GAGTTTATTACTCAACATGACATCCTATGAAAGCTCTATTGGTCAAGCTC
TATTGGTCAAGCTCAGTATTTAGTTTGAAGTACAGTTTTTATGGGAGGGG
GTGTTAAGATAGGCAAAAAATGTCCAGGATTCATTTTATACAAACTATAG
GGCCAAATCAAAAAACAATGAAACTTGTTGAGGAATAATTTTGTCAGTTG
ACCAAAAAAATTAAAAAAATTTTGTCATTTTTAAGGCGATTTATGGGATT
TACCAAAGTTTCTTCTTTATAAAAAGTTCTCCAATTTCATTGTTTTGTTT
TAAACCTCATTAATATTAGATCAATTTTTCAAAGATATTTATCAAAATGG
AAGAGAAACCTAAAATGAAAACATTGGGAGACGAGGCACCTTCTAAAGTG
ACACCAATGTCAGTCCTTGGACAAGATAAAGCATCTACATCATCTTTAAG
GAATCCTGGCATGTCATCAAATCAATCTTTGGTTATGCAACTTCAGCACG
CAACACAAATGTCCAATATCACTGGAACTGCAACAACAGCGACTTGTATG
TTTTTTAATTTTCTTTTTTTTTATCTTACTTGACAACCAAAATTAAAAAT
TAAATTAAATTTAAGTTAAGTTTTCTAACCTATAATTTCAAAATGATATA
TACAATCTATCTCTTTTTACTTTGAATTTCTAAAGAAAGAAATTTGGATA
AAACTCAATTTTGTGCCTGTAATATTTCTCATTTTTGACCAGCATCATCA
ACACAACCAGGGGCCACTGATACACAACAACAGCAACAACAACAGCAAAC
AAATACTGCCACACCTTTGACAGAGTACACTATGTACCACCATTTACCAT
CTACAGTCATGAACCAACAAAATAATACAGGTATATATTGCAAAGGTTAT
ACAGAGCTTTTTTTCCTGTGTTTTGTTAGTTCTTTGGTAAATATTCTGTT
TTTTTTCTATTAGGAGAAATGAAGAAAGTTTTAACTCAGAATGTTTTAGT
AATTCAAAGTTATTCAGCTTATTAATAATTAAGTTTAACAGCTATTCTCA
CTGTCAGAGTTTTGGCAGTGATTTATTTACTTTTGATTTTAAAAAGGCTC
TTTCTATAGTCTATGTTTAAAAAAAATGTTCCAAAATAAGAAGTTTAGAC
AGATTTGTCATGTTCAAAAGAGTAATTTTTTTTCCACCTGTAGATGATGG
AGATGGTGCTGGTTCATACGATGACAGCCCACGTGAAATGAGAGAACAAG
AATTAAGGGAACAAGACCGTTTTCTACCCATCGCCAATGTGGCTCGAATT
ATGAAACGTGGTGTCCCTGAGACAGGAAAGGTTTGTTGCTAAAGTAATAA
CAGTTATACAGTATGTTTGGGCATTTCTCTTTTTTTTTGGATTTTAGAAG
GGTGTTTATACAGTACATTTATAAGTTATACAGTATGCTCATTTTACTTT
ATAACCATTCGGGTCGAGGCTTATTAGTTTTTTCAAAACATTGTCAGTTT
TGGCTGATTTTCATTCTCATTTCTATTTTTTCTCTCTGATTGTTGATATT
CTTACATTATGGTTGAATGTGTATAAGTTAAAATATTCGTTTTCTTCTTC
CCTGTTTCATTGATCCCATTTTCAAAACAAAATTTTAATGATGAAAATTC
TCAGTAATAATACTTTGTTTATAAACGTTATTCTTATAAAAAAGAGAAAA
AAATTTTTCGGAAAAATAAGCATATCACAAACATAATTTGAGCTTGATTC
CAAAATTTAGCTAGGCATAACTGAATATGTTTTCCAAAAAAAATATGCTG
ATAAAACGAACATTTCTTTTGGAAAAAGGGCTTTAGTTTAAACTACAATT
TGTGATTTTTGTTTGTTACTTGTTACTCAACGTCAATAATACAATCATTT
TAAAGAGGTGTCAAATAACTGGGAAGTTTTTCTGAAGTCATTTTATTCAC
ACATACTCAGTTTTTCTGACGTCGTTTAGGGGCTACTTAAAAGACTACAC
AATAAACTGACGAACAATATTTGACAATATTGTTTTCGGACCGTAATGTA
CAAAGTAAATAACAGGTGCTCTTTTATAAAAAGGAATTTTCTTTCTGTGA
ATAATCCCCCTATATTGAAGGAAAATTGCAAATCAAGCTGACAATGTATT
GCGGACACCTTTTCAATATATTGCCGGCACTCAGCAGTATATCATCAATA
TATTGCCTGACAATATATTGTGTAGTGTATGTAGCCCTTTAGAACAAAGT
CCTTTGACGTTAGTGTCAGGCTTTATAGGTGTAATGTTCAGTCACATTTA
AAAATTTTATCACCCAATGCTGTCAGTCTGATCAAAAAGCTAACAACTAA
TCTTCTTTTCGATACTTTTTAGATTGCAAAAGATGCCAAGGAGTGTGTTC
AAGAATGTGTATCAGAGTTCATCAGTTTCATCACTAGCGAGTAAGTATCC
TTTTCCTCTTATGTTTGAAAGAGTATAGCATAAATTCATAATAAATAATT
TCATAGTTCGAAAGGGGGCACTACCTCCCCTACCCTAGGGGTTCTATCCC
CTTTTAATATGTGGTGCTACCCCCCCCCCCCCTCAAATTTGGTGTACCGG
GTGTGTCAAAAAAAACGCGCCTATTTTTCGATTTTTGGCGTACAAATTTC
TATTGGACAAAGACAAATGAAATTTTTAGGGAAGATTTAAAATTTTATTT
TTTACCCTTGGTGGAAATTATACATTTGTATGTTCATTTAAAGTGACTTT
ATGATAATTCCGCTGACTTAGGTCAATTTTTCATTTTCATAGTTAAATTT
TCCCTTATGGAACAAGGTACTAAACTATGCTTCGTTTTTACGCTCTTATT
TTGTCTCGCTACTACTCGCTACGGGCATCATTTTTTCATTTCATAGGTTA
AGTTTTGTTCCAAGGTCAATATTTGATAGATTCTAGCTAGTTCCAACCAA
GCCATTTTTTAACGTCAATTGCGACGACAAAAAAATACTTTCAAATCGTC
AATGGTGCAGAAATGAACCGATGTTATTACCTTTTGTACATCAAAATCCT
TAGGTTTTCAGTTCAACTGTTTTGCAGAATGTTAAAGAAGCAGAACAGAG
CTTGTATAATATAAATATGATCGATTAAATAATGGAAATGTAACAAATTG
ATGAAAATTTGTTTTGCTAAGAAATGCTTTACATTGCCTTGAACACCTTG
AGATGTTACGATAACACTGCGAAAAGCTTCCCAAAACCCCTTTAATTTGA
AAACAAGATAAGTTTGACATTAAAAATGTTTGGTTTAGTAGGAATATTCC
CTTCTACATCTAGCTTAAACTTCAATTTCACTTTAAAACGGTTTTTACAG
CTGATAGGAAAGCTAGAATGTAAAGGTTTGACGTCTTCTTTGACGCCAAT
TAATTGCTACTGTAAACAACACAAAAAGTAGTGATCTTGCGAGAATATTC
ATAACTTTAAATTCATTTGAGGTAACTCTGCCAAAATTTTAGAAATGTTT
GGAATTAGAATGTACAATACTCACAAAAAAATTCAAGCAGTTCAACTAAA
TAGAAAAATGTACGTCAAAGATTGTAAAATAGGGGCGTTTTTTTTTGACA
CACCCGGTATAACAAAGAAAGAAGATATTGCATTGTAAATAAAAAATCAA
ACTTCTAATTTGGGACAATTTGATACAAAAAAGCACCAACGCAGCTCAAC
CCTCCTTCTAAATGAACCCCCCCCCTATTTGAAAGCCGGGTACGAACAAT
GTATTTCTTTTATGTATAAAAAAGATGGTAGATTACTTCAAAAATTTGGA
AAACTACAGTCAATTAAGAAGACCTTGTACTATCAAATTACNAGCGATTC
CAAAAAATCGAACAAAATTCCCCCTACTACTTGTACTATCAAATAGAAAT
CTAGTGGTGATTCCTGGGAAGATTTTCCAGTACCTTAAAGGAAGAAATTT
TGGCGGGAATTTAATTTGGCGAATGGCCGAAAAAGTTTTTTAGAGGGAAT
TTAATTTGGCGGATGGACGAAAAAACTAAATTTGGCGGGAATTTAATTTG
GCGTTTGCTGAAAAGTTTATTCTTAAACAGCTACAAAAAAATGCAAAAAC
TCCTTAAAAGAGCATATTTTCAAAAAATTAAAAAAAAAGAAATTTTGGCG
GGAACTTAATTTGGCGGATTCTTGCCAAATCCGCCAAATTTTCTTTCCGC
CAAAATTTCTTCCTTTAAGGTAGATCGGTGCCAAAATAGGCTGCTACATC
GGGAACAATAATCTTTCAAAGGTCTATTGAGACCCATTATCTACACATTT
GGCTATGAAATAAATTTTTACAAAAAATAAAAAGATACTAAATCTTCAAA
AAGTCCTCAAAATAATTCCTTAATTTTTTTGACTTTTCACAACCTAGAGC
AAGCGAACGATGTCAACAAGAAAAACGAAAAACAATTAATGGAGAAGACA
TCTTGTTTGCAATGACAACCCTAGGTTTCGATAATTACGTTGAGCCTTTG
AAAGTTTACTTGACCAAATATCGAGAGGTTTGTCTTTTTAATTTTTAAAG
TTTTTTTTCATTCCAAAAGACACCAAAATCAGATTCTTACGTTTTACTTC
TTATTTCTACGTTACGTTACTAACTTCACTTATCATCCGGTCTAAAAACA
TGTTGTCTAAAGTATTCGTAGCTTTTTACTAAGTTGATGAAATACAAGAT
TTAACTAATATTTCTTTTCTCAAAAAGTGCTATCATTTCAGATTGTGCTA
TATACTCGAATTTACAGTTTCCCTCTTCCTCTGTAAGGTTAGCGAGCTCT
CAAATTAAGGGTATTCTCAGCAATCTTAGCTAAATTCTTATGTTTTTTTT
ATGTTCTTATTTTAAATTTTACCAGAGTTTGAAAGGCGAGAAAGTTTTGA
ACGTTGCGGAATATGCTCACCATGTAGATAGCGAAGAACAAGCCAGTGGA
TTATCGGCTATACAATATCAAATCGCTGGTAGCAACCTTCATCCGAGCAT
GGTTTCTGCTGATGGAACACCGTACGCTGCGTACACTCAAGCTCAAATTA
ATCAAGTCAATTCACAGGTAAGAATCCCGGATGATTTGATGTTTCATTTC
AACTTACTCTTGTGTGCTTANCCCCCCTGCTTATTCCCCCCCCCCCCCCC
CCCTACAATTAAGCACACAAGAGTAGTATTTCTAACACTCAAGGTTTGAA
AATTATAAAATAATCCTCTTTTGCCTATGCCATAAAGTTAAAGATAAAAA
AACCCCGATCCATACAAGGAACATACGTGAGTAGATTTAGCCAAACCCAA
CCTTTTTCGACAAGCTGAGAATTGCAGGTTGAAGTAATGAAACTGCTGTT
GTACTTTTCAGGAAAATTTTGGAAAAATGAAAGAAACCGTTGATATATTA
TTTTGTAACAAAACGTGTACGAAATTCTTATATAAATTTTGTTTCCAGAT
TCAATTCAACACGTGACAAGAAAAATCTATGAACATGTAAATTTGGATCA
ATCACAGAGAAGCTACCAGTTTGGGGATATTTGCAGTGAAGTTGCCACAA
GGGGGTTGTTGTGTTTGATATGGATGGAGGATGGGATGGTTAACGTGTCA
AAGCTTTACAACAAAAGCTAGTTTTAAGCAAGACTCGATTATCATCATAA
CAACTTTAATGTCTTCAGGCCCAAAAACAATCTGTTGTGTGTCCAATTGT
CAACTTGACGTATGTCGGACATTTTTAGAAGGAAGTTAGTCCACCTAAAA
TATAGTATAGATCTTTGCGTCGCCTGGCAGAATCGCCCAAGTAACAAATA
TTTATGCCCCCATAGATATTTCTAGGTTTTTCTCGGACGCTCCGGATTTT
TTAAACATCTCAAGATCCATATAGAATACAAATCAAAAGGTTCAAGCTGT
CCGCAGTAATTTACATGCCCACCTATTTTGCGTTATTATTTTGCCACGTA
AATGTGAGCAAATTTATTTATTTTTAAACTTATTCATCGTTTTTAGATGT
TTTTTTTTTGTAAATAATCAAACTACAACGTACCTTACTTTAATAGTTAG
AAGTGAAATACAGTTTATCAGTTAAATTCTAAGTGACTAACGTTTCTAAC
GTCGTTTTGCATAATATTCCACTTCCCGCTCTAAGATTCTCCTGACTTTC
CGGGATTTTTCCGCTATTTTACCCACGAGAACCGACGTGAGATTGGAAAC
GGTTTTTTAAAAATCTTTTGTTCACTTTTGAAACTGTCTAACTTTCCGAA
GCTCATTTTTCAACTACCCAGAGTCCTGGTCTTTTTCCGCTAGAAAAGTT
GAATCTTATGCCAAATGACGGTAATAATATGATCTGTTATATTTTGTTTG
GCTCAATTACTGTACTAGTTCAGGCATTTCACAACTTTAGAACAATCACA
ATGATCAAAATTTCGAAAGAAAGAGAACAAAGCCAAAGGTTTCTTACAGT
GTAAAAATATATATATTGCAAATAATTTCAAAAAAATAACTATTATAATT
CAATATAATTAAAAAAAAAACTATTTTACATGTTACATTTAGATTTTCTC
ACAATCGTTGTTTTTGAAATTGGCTAGGTCAACTGAAATATTTTAAAGCT
TTAGCGGTCTTGTCTAAAATAAAGTCGGTACGATCTCAACAATTGTAATT
TTCGGGTACTACTTTTGTCGGGTTGCACGAAAGCGACGTTTATGTAAGTT
TCCATTTGGGATCCCTGTTTAACATCTTCCAAATCCTTGCTTCTTCAAAC
AAAAGAAAAGAGGCCTTGTTCTTCCCCTCCAAATTCTTCGTCCTGCAAAA
CTGTTTGAATACGCATTCGCTGTTCCACTTTTTGATAGAGTTCAAATGAT
ATTTCTTCTTCGGAAAGAAAGCTCAAAATTCCTTTGGCGCCCTGTAAATG
GCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_039309XLOC_039309Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00062759-exon-scaffold_371-1575043694:560391..560437TCONS_00062759-exon-scaffold_371-1575043694:560391..560437Clytia hemisphaericaexon
TCONS_00062759-exon-scaffold_371-1575043694:558293..558387TCONS_00062759-exon-scaffold_371-1575043694:558293..558387Clytia hemisphaericaexon
TCONS_00062759-exon-scaffold_371-1575043694:557958..558095TCONS_00062759-exon-scaffold_371-1575043694:557958..558095Clytia hemisphaericaexon
TCONS_00062759-exon-scaffold_371-1575043694:557508..557644TCONS_00062759-exon-scaffold_371-1575043694:557508..557644Clytia hemisphaericaexon
TCONS_00062759-exon-scaffold_371-1575043694:556398..556465TCONS_00062759-exon-scaffold_371-1575043694:556398..556465Clytia hemisphaericaexon
TCONS_00062759-exon-scaffold_371-1575043694:554311..554440TCONS_00062759-exon-scaffold_371-1575043694:554311..554440Clytia hemisphaericaexon
TCONS_00062759-exon-scaffold_371-1575043694:553771..553962TCONS_00062759-exon-scaffold_371-1575043694:553771..553962Clytia hemisphaericaexon
TCONS_00062759-exon-scaffold_371-1575043694:551935..553389TCONS_00062759-exon-scaffold_371-1575043694:551935..553389Clytia hemisphaericaexon
TCONS_00062759-exon-scaffold_371-1510915933:560391..560437TCONS_00062759-exon-scaffold_371-1510915933:560391..560437Clytia hemisphaericaexon
TCONS_00062759-exon-scaffold_371-1510915933:558293..558387TCONS_00062759-exon-scaffold_371-1510915933:558293..558387Clytia hemisphaericaexon
TCONS_00062759-exon-scaffold_371-1510915933:557958..558095TCONS_00062759-exon-scaffold_371-1510915933:557958..558095Clytia hemisphaericaexon
TCONS_00062759-exon-scaffold_371-1510915933:557508..557644TCONS_00062759-exon-scaffold_371-1510915933:557508..557644Clytia hemisphaericaexon
TCONS_00062759-exon-scaffold_371-1510915933:556398..556465TCONS_00062759-exon-scaffold_371-1510915933:556398..556465Clytia hemisphaericaexon
TCONS_00062759-exon-scaffold_371-1510915933:554311..554440TCONS_00062759-exon-scaffold_371-1510915933:554311..554440Clytia hemisphaericaexon
TCONS_00062759-exon-scaffold_371-1510915933:553771..553962TCONS_00062759-exon-scaffold_371-1510915933:553771..553962Clytia hemisphaericaexon
TCONS_00062759-exon-scaffold_371-1510915933:551935..553389TCONS_00062759-exon-scaffold_371-1510915933:551935..553389Clytia hemisphaericaexon
TCONS_00062759-exon-scaffold_371-1491911889:560391..560437TCONS_00062759-exon-scaffold_371-1491911889:560391..560437Clytia hemisphaericaexon
TCONS_00062759-exon-scaffold_371-1491911889:558293..558387TCONS_00062759-exon-scaffold_371-1491911889:558293..558387Clytia hemisphaericaexon
TCONS_00062759-exon-scaffold_371-1491911889:557958..558095TCONS_00062759-exon-scaffold_371-1491911889:557958..558095Clytia hemisphaericaexon
TCONS_00062759-exon-scaffold_371-1491911889:557508..557644TCONS_00062759-exon-scaffold_371-1491911889:557508..557644Clytia hemisphaericaexon
TCONS_00062759-exon-scaffold_371-1491911889:556398..556465TCONS_00062759-exon-scaffold_371-1491911889:556398..556465Clytia hemisphaericaexon
TCONS_00062759-exon-scaffold_371-1491911889:554311..554440TCONS_00062759-exon-scaffold_371-1491911889:554311..554440Clytia hemisphaericaexon
TCONS_00062759-exon-scaffold_371-1491911889:553771..553962TCONS_00062759-exon-scaffold_371-1491911889:553771..553962Clytia hemisphaericaexon
TCONS_00062759-exon-scaffold_371-1491911889:551935..553389TCONS_00062759-exon-scaffold_371-1491911889:551935..553389Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_371supercontigscaffold_371:551935..560437 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.198991	0.634159	0	0	0	0	0	0.2125	0.282722	0	0	0	0	0	0	0	0.146366	0	0	0	0	0	0	0	0	0	0	0	0
Blast
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BLAST of TCONS_00062759 vs. Swiss-Prot (Human)
Match: NFYB (Nuclear transcription factor Y subunit beta OS=Homo sapiens GN=NFYB PE=1 SV=2)

HSP 1 Score: 187.193 bits (474), Expect = 4.125e-54
Identity = 102/168 (60.71%), Postives = 123/168 (73.21%), Query Frame = 1 
Query:  331 EQELREQDRFLPIANVARIMKRGVPETGKIAKDAKECVQECVSEFISFITSEASERCQQEKRKTINGEDILFAMTTLGFDNYVEPLKVYLTKYRESLKGEKVLNVAEYAHHVDSEEQASGLSAIQYQIAGSNLHPS-MVSADGTP--YAAYTQA--QINQVNSQIQFN 819
            ++  REQD +LPIANVARIMK  +P+TGKIAKDAKECVQECVSEFISFITSEASERC QEKRKTINGEDILFAM+TLGFD+YVEPLK+YL K+RE++KGEK +  A  A          GLS    + A +N  P+ +++ DG       YT +  QI+ V  QIQF+
Sbjct:   49 KESFREQDIYLPIANVARIMKNAIPQTGKIAKDAKECVQECVSEFISFITSEASERCHQEKRKTINGEDILFAMSTLGFDSYVEPLKLYLQKFREAMKGEKGIGGAVTA--------TDGLSEELTEEAFTNQLPAGLITTDGQQQNVMVYTTSYQQISGVQ-QIQFS 207
The following BLAST results are available for this feature:
BLAST of TCONS_00062759 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NFYB4.125e-5460.71Nuclear transcription factor Y subunit beta OS=Hom... [more]
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