TCONS_00062692 (transcript) - C. hemisphaerica

Overview
NameTCONS_00062692
Unique NameTCONS_00062692
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3146

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00062692 ID=TCONS_00062692|Name=TCONS_00062692|organism=Clytia hemisphaerica|type=transcript|length=3146bp
CCTTTCTTCTGACATAGTCCGAGAGAGTCGCAAGGaagggaatttttttc
aaaaattcagatttttagTTGTGCTCCATCAAAGTCATCAATAATTGGAA
CAGGAACAgGTACATTCTCAAAAAATGAAGCTGATATTCTTGGCTGTATC
ACTTATAGTGGTTACACTTGATGCTTTACCAAAACACGGCGTCTTTCGAC
CCCCGACGGAAATTGAAGTCAACGAGAAATTTTATCATCGACATGGAGAT
ATTGAGCGAATCCAACATAATGATGTGTCCAACTTCAAACGCCTTGCAAA
GAAATTGAAACACATCATTGGAGAGACGAAAGTGTTGAAACGAGTACTTG
ACTCAAGGAAGAAATTTGGTCACTTGAAAAGCGTAGCTGACGTCAACTAC
CATAGATACGGCCGAAAGAACGATATAATAGAAAGTGAAAACCGTAAACG
AAACAGCGTCAAAATCAACCTTTGGAATCCAACACAACCCGGAGAAAAAT
TAGTCATACCATACTCTTTCAGATCTGACTATCCAAATAGACTTCGACCA
TACGTTGAGAAAGCCATAAAATCCATGAATCAACATTTGAGATGTGGTTA
CGATGTTTGGGTACCTTACAGTAACCAAGCTCATCGTGTTGAGTTTATCA
AGGATGGAGGTTGTTACAGTTTATTGGGCAAAGACACCAGTGAAGGGAAT
AAACAACCAATCAGTATCGATGATGGATGCGAAGCAAAACATATTGTTTT
GCACGAAATGATGCATGCAATGGGATTCTATCATGAACAGAATCGCTTCG
ATCGTGATCAATTCATCAAAATCAACTGGAACAATATTCAAGACGGTATG
GCAAGTCAGTTCGACAAAGCATCAAATAACAACATCTTCCAAACTAGCGT
GCCATATGATTACATGAGTGTTATGCACTACTCTTTGTCATCATTctcta
aaaatggtcaaaacacCATGACGATCTTGAAAAATGCTCAGAGTGCAAAG
TTAACGGCACAGGACTTACGAATCCTTGGAGACGTTCCCGATTTATCTGC
AGAGGATTTACAAGAAGTTAGAGCTTATTTCAACTGTAATTCTGCCGGTG
GCCGAACAACAGCACGACCAGCACCACGAACAACAGCACGACCAGCGCCA
CGAACAACCCGAAGACCTGCAACGAATCGTCCACGAACAACCCGAGGAAC
AACAGAAACAGGAGGTGAAGCTACATGGTCATGGGTATCTGACGGATCAA
CAGAATCATATGGTACTGATGCTACAGAATCATATGGCACAGAATCATAT
GGTACGGAGGCTACAGAAATTTATGGTACAGAGGCTACAGACATTTATGG
TACTGAGGGTACAGAATTTTATTGAGGCTCTCAAGGTCCAGAACTTGTCT
GGAGCTGATAATGGAGCTGATGATGACGCTATATACTCAATGCTCTAAAG
AATATTTCATATAAAGATATCTTTCAAAGTAGGGAACAATGGATTTGATG
GTTAAAATCTATATATTGCTATTTACTAATTTGAGATATAGATCTtatat
gaattatttttcaagccgaaaatattttcaagttgTATTTCTATAGTTTT
ATATCGATCTATTTATTCGCTAATTTACGTAAACtttttttgtaaccttt
ttttACATGTaacatttcgaaatttatttcttttgatatttacATATTCA
AACTCAGATTCACTTTCAAACCATTTTACGAATAGACCTTGGAAAAGTCC
TCTTTTAAAAAACCAAGAAAATATGCAAAGTAAATATGTCTGTGGCCCAA
AAGCTTCTCATTGATAGCTAACTGATGGTAGGGGAGGGCACTACTTTTCT
GGTGTGAGCAAAAGCATCATCAGacaaattagttcccgcaaaaaatagTT
TATTTAAGGTAAAACATTTTACTCTTgctctttttttctcttcaaaatGG
AAATTGATAACATTTGAAGGTTCTTTTTCAAAGTGTTTATTCTTAGATTC
GTTTCtttattcaaaacattttaatcAATCTGACAAATCGATAAGCTCGA
ACTCTCCAACAGTAGTTTCAGCTTTCGTGGTTTCTCCGAAAGTGATAGAA
CGAGTTTTTGGTTGGTTTTGTTTAGCTGCTGCTTTTCTTTGTCGTGCCGA
CCGTCTTCGGCTAGCCGACCTTTTTCGTTTTGCCGATGTTGATCGTTTTC
GGGAAGAAGATCTCTTACGGGAGGCAGAACGTTTTCGTTTTGCCGAGGCT
GATCGTTTTCGTGTCGGTATAGCCGACTTTTGTCGTCTAGCACGTCGCTT
TTTGGAAACCGATCTTTTTGGTGTGCAGTATATTTCTTGAGGAACGTCGG
TGGGTGGGGTCGATGGTTTTGCCGACACAAGACGTTTTCGAGAAGTGGAC
TTTTTTCTCGAGGCTGACCTCTTTCGGGATCCTGATCTTTTCTGGGAGTT
TAATTTCTTTGAAGAAGGTGTTGATTGACTTTCCGTTAAAGTTTGAACCA
ACTTTTTCGTTTCTTGGTTTGTTTGCTTATTAACAACAGCCGCCGACTGG
CTTCGTTTAGCAGAACGAGAACGTTTTCGTCTTACCGAATGACTTCTGCG
TACCGATGGTGATCGTTGTCGTGCAATACTCGGTGAACTCTTTCTTCCAT
AAGTTCTACGTCGACGATTCGATCCCGATCGTTTTCGAGATGCCGAACGT
TTTTGGGACACTGCTCTCGGGCTTTGTGAACGAGCACGTTGACGTGAGAT
TGAGCGCTGGTTACGTGAGCGGGATCGTTGTTTACGAGACATGGGACTAC
GTCTTCGTGATAAAGATCGTAACCTACGACCTGGAGATCGTCCGCGTCGT
CCTAAAGATTAAGAATAAGAACTTTGTTTAGTTTTATGGTGGAAGATGAT
CAACTATACTATTATGTATTTGGCATGCATTAACATTACAATGTTTTCAA
CATCTTCAACATAAGTTTTATACTTACTTAATGCTCTACTTCTGGTTCGC
ATCTTGAAAAATGTTGCtgacaaagaaagaaaaagtcgGTGCTTTGTGCT
TGTGTATGTACTAGATAACCGGTGGTGTTTACTTGGTTGAGAATACAGTT
GTTAGAAAGTATTGCACAAAGTTACTTGAACTCTACTTAattaaat
Run BLAST on NCBI

transcript from alignment at scaffold_371:429574..442512+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00062692 ID=TCONS_00062692|Name=TCONS_00062692|organism=Clytia hemisphaerica|type=transcript|length=12939bp|location=Sequence derived from alignment at scaffold_371:429574..442512+ (Clytia hemisphaerica)
CCTTTCTTCTGACATAGTCCGAGAGAGTCGCAAGGaagggaatttttttc
aaaaattcagatttttagTTGTGCTCCATCAAAGTCATCAATAATTGGAA
CAGGAACAggtacaaaaaaaattttatttagttttatACACCCCTGGTTC
AGTGACGTTTTGGAGGGTTTCGCGGCAGATAGGGAAATCCAGGGAAATCC
CCACAGCAAGgatgaattttttatcaaattcccAATTGTGATAGAAATTC
AACCTAAAAATACAATGCGGATGGTTTAAGTGAGCAATTTTTGCATTGAA
CTTTAAATGGGGTGGACAATTGGGCTGAAATTGCATTTaattagggtatt
tttcccactggGGATGAAACTTTGACTAAATTTCCCAGAGGGTGGGGTCC
TGCCATGTATGTGACACATGTCTGTTTATACTTGGTACTCGTACCAGGCT
TATCTTGCATCTATatggcaatgaattttaaaatatcATTATGTCATTAT
AAATAGGACACTGACTTACCTCGTTATTTTCCAATTCAATTCTTTTCTAT
CATCTAGGTACATTCTCAAAAAATGAAGCTGATATTCTTGGCTGTATCAC
TTATAGTGGTTACACTTGATGCTTTACCAAAACACGGTATGATATTTTTT
TAGTATCTGTTGACTAATCTGggtttaactaaggctccagtacagcgcta
TAAGACCTTTTGATAGACTGGGTGATTAGTAACTTAAGTGGACTCAGCGt
catgaaaaattataaattttcattaattttgcggatttgggGGCGCCATG
CGCGAAATTAAGTCTcgatggaaatttggaaagtcCTTATCCACGAAGAA
TGTTTAAGCTAAACTCAAAACTTGTAAATTTATAGTAAATTCATACTTGC
CTTTACCAACTCTTAGCCTTCTAGTCTCTATCTAGTTACAACCGGTCTCA
GTATTTTTAATGAACATCATATTTTTTATACGCTACATATATATTTATCA
TACTCAATATCCAGGTGAAGAGCCAATTGTAAAACTTtggatatacacgt
ttttttttttaagaaactagttttaccaagcaggctcaatgtttcttaag
aaatcggccttttgagccttaaatgtttcttacatgtttctaaactttgt
caagcttaaaggacgcatttcgataatacaatagtctaattgactacacg
cttctttttttttataagaatacactttataagaatgtccatgatgaaaa
tggccaaaaaactaagaatatgctaagaatatcaccatcatggaattttg
ctactNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtaaattatcaatta
tccccaagttaggctcactccttttacaaaagtgccattttatgcttgag
acgtatgtactaaatgttaaatctagtatgaataAGGATGAATgaatgtg
ctgtaagaatattttaggatgattttcccaaaaaagttaagaatattaat
gatgaaatggatttacaccattcttataaaaaaaaaaaagcgtgtaatct
acggtactttcctatcttctatattgattttctgactttctcaagtgttt
ctaactgttatgtatgtatatttctggaaccttgattgaaaggttcttaa
aaaaaACGAgttaaaaatgctattttctcattctcagcctcagcatgttt
cttagatgtttcttagtttttaggcattctgagcctcatgtttcttaaaa
gtgtgtttcttaaaaaaaaaacgtgtactgtgaAATATatcgttattatt
attattatttgagaTATATTTTGATGTTTCGATAATGcactattttttat
ttatgaaaGTTTTCCTTCTATCGAAGATAGATTAGGTACACTTTTTCTAT
TGAAATATTAgaacaagaaataaaaaataagaaaaattgaatattaagTC
TCGATGGAATATCTTAGTAAACGATTTTGTAAATATCTTAATAAGAGAGA
TACACCTTTACTTAccgagaaatttttcaaagtcttgCAAAACTATCATT
TTGCGTGTCCTTTTCTTATTTAAAGAgccaaaatgaagaaatttagGTTT
AATACCctatttttactattttgacccttaatttgaataaaaatttactC
AGTATTGTTCttagattgttcttatttttgtgccttgttgttcttataaa
atcattcttataaaaaaggctaTATTTTACTAAATTAGTTTTTAAATCAC
AGCAGAACCAGTGAGTAATCCTCCGTTTTATGCTGGATACttccagggat
atgttatagcgtagctggataacgcacatttgaaaaagccttgtcctatc
tctgtccctgacattaaaatttgatatgaaattaaacttttttaattaca
aattcgtgaaatttggatttctttttagccaatgattctgctgctgcatt
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNacatccgaaatttttaaagagaaaccatgaaagcttct
caaattcataacacacgctgataaaattagatttcatttacaaagaagct
tttggggtatctttttcaaatattattttgatgaaaagcgggaacatcat
agcaaaatatatgcaaacgtactgcatgaatactttgtctgcttaatttt
tcttataaaaacagagcACTttaggggacagagatggatttttattatga
acagtttacaatagaaaagacaaaggagcaatccgctaaggaattctcgt
ccttcatccagctacgctataacatatccctgatacttctaaactttgat
gaaaatcaaaacGCGACTTAAAACGCCTAATTTATACTTCATCTCATCTT
CGGCCAGACATTTGTTTATACACTTTAAAGGGCGGTTTAACAAGACCCTT
TTTAGACTATGACTTTTTTCCATTGTTCAGCGATATTGCAATCTTTTTTC
CAGGCGTCTTTCGACCCCCGACGGAAATTGAAGTCAACGAGAAATTTTAT
CGTAAGTGATAGTACGCATACTTTACACAATGTTTTATAAAAAGGTCATA
CCCATTTCTTAACCATTTAAGTACCAACCcttcctgtaatgcccagtttg
agttagaaatcgtcattcttggtcgtaggaattggattgggtttcatggt
caagcaaaaaaaaaatcaaaagtaaaaaagacttttccaatgagaaaaaa
gaaagtaagaaaaatgcaaagatttgacaaaaatccacttttttaagatt
ttgaccgtttttgaccattttcggTCAACGAGtaatccaagaacctccaa
aattAGCCCTGCtgtacttgattctgtcctctagcgaattaatttgaatt
tttactaCTGGGCTCCTTtttatcattcaggcaggtccacCTAAATCTCT
taagctatccaacggactATAAACGAGCTACAAACTCCTTCTAGCTCCGG
AGacataagcctttaaagtttgaactagcaattttctttgaaaaatgacc
gtggtacttaaagggttaagctGTTAAATTCTTTCTTGATTTAAGTCCAC
TCAGCCTTTTTCCTTGACACATTTTTTAAACTGAATGATCACGAAATACT
ATATGATTTATGCTGATATATCCAACTATATCTTAATCTTAATCTATCTT
AATCTTCTAAACAGgccttttatttaatttttctgttTACTTTAGATCGA
CATGGAGATATTGAGCGAATCCAACATAATGATGGTAAGACTTTATTCCG
GGAGGTTTACGATTTTATTGCAGCCGTTGCAGCTTGGCCTAATTAAGCCC
TATTTACATTCTGATTTAGAAGTTGATCAAATTATCTTGGTAACCATGGC
TTTGTATACATCTTTAGACATGCCCAGTATTGTCCACATAATCAATAGTT
GACTTAAACTATGATTTGAAACTGGACTTCATGGCGTCTCCGTCCCAATC
TTCGATCGAAATTAATCTATAGTATTAGGTCTTTTTATGACTCCTTTTAA
CCACTATCCTAATTTCCTATTCTTCTTTCTCTCCAAACTGTAGTGTCCAA
CTTCAAACGCCTTGCAAAGAAATTGAAACACATCATTGGAGAGACGAAAG
TGTTGAAACGAGTACTTGATACAAGGAAGAAATTTGGTACGTTTCAAAGC
TTAACCCGCTTTTTATCAGGGGAGGGGTGATTTCCACCACCTTGGTGGTT
GGTGGTTTTTTGTTAATAGctcacagaaaaaaactttttttgacactgaa
actttttgacatttaaCATAATCCTAATATGTATACCAAATGTTATCATC
ATACACCCactagatcaggttttatgactgaGTATTTTGATTTTGTGTGG
GCGTGTCATAAAGTCCaactaaaaccctgtaaaatctcaaagttgaaatt
ttcggTAAAAACCGACactaatttcattgttttttaacTTGTCCCCAGGT
CACTTGAAAAGCGTAGCTGACGTCAACTACCATAGATACGGTATAATTCT
tagttttgatatttaaatattttatatatgttaacgatttgacataaaaa
atttgcaccttgggtaggctgctggcatctaCTAAAGgatatactacctg
gggttttgtagaggtagGCTATTCAGACTATGCAAGTTGGGTGGAGTGGA
AAAACTCAATTTAGTTACCATTCCTGAGTGTTTTTATAAGGTCAGACCAT
TTCATTCTTATCAATCTTGTTCCTAGGTTATGAAGTCAGTAAGCAAATTA
AAGCGGTGCCGGCGGcgttacttaatttttttttctaactcGCTTTGACA
GGCCGAAAGAACGATATAATAGAAAGTGAAAATCGTAAACGAAACAGCGT
CAAAATCAACCTTTGGAATCCAACACAACCCGGAGAACGATTAGTCATAC
CATACTCTTTCAGGTAAGATGAAATCTTTCTCGTTAATTTTGCATTTAGC
TGCAGTCTTTGTNTAATAGTTGACTTAAACTATGATTTGAAACTGGACTT
CATGGCGTCTCCGTCCCAATCATCGATCGAAATTAATCTATAGTATTAGG
TCTTTTTATGACTCCTTTTTACCACTATCCTAATTTCCTATTTTTCTTTC
CCTCCAAACTGTAGTGTCCAACTTCAAACGCCTTGCAAAGAAATTGAAAC
ACATCATTGGAGAGACGAAAGTGTTGAAACGAGTACTTGACTCAAGGAAG
AAATTTGGTGCGTTTCAAAGCTTAACCCGCTTTTTATCAGGGGAGGGGTG
ATTTCCACCACCTTGGTGGTTGGTGGTTTTTTGTTAATAGctcacagaaa
aaaactttttttgacactgaaactttttgacatttaaCATAATCCTAATA
TGTATACCAAATATTATCATCATAAACCCACTAGATTAGGTTTTATGACT
GAGTATTTTGTGCGGGCGTGTCATAAAGTCCaactaaaaccctgtaaaat
ctcAAATGTTGAAATTTTCGGTAAGAACCGACactaatttcattgttttt
taactcgtCTCCAGGTCACTTGAAAAGCGTAGCTGACGTCAACTACCATA
GATACGGTATAATTCTTAGTTTTAATATTTAAACATTTTATATATGTCAA
CGATTTGACATAAAGAATTTGCACCTTGGGTAGACTGCTTGCATCCACTA
AAGGATTTGTGCTCCTTAtttactacctggggttttgatGTAGGCTATTC
AGACTATGCACCTTGGGTGGAGTGGAAAAACTCAATTTAATTACCATTTT
ATGCTtccctacacaaattttgcacccctCCTGTCTGCGCTACTATAATG
CGTTAGTTAATTTCTTTATCATATCTCGCTTCGACAGGCCGAAAGAACGA
TATAATAGAAAGTGAAAACCGTAAACGAAACAGCGTCAAAATCAACCTTT
GGAATCCAACACAACCCGGAGAAAAATTAGTCATACCATACTCTTTCAGG
TAAGGTGAAATTTATCTCGTTAATTTTGCATTTAATTGCAGACTTTTTTG
TGGTATTCTCAAAGTGTTCTCataattcaaaatcaattttaatttattaa
TGATTTTGTGCCAAGTGCTAATACTTTTTAACGCATTTCCATTTGTAATT
TATTAATGATTTTGTGCCAAGTGCTAATACTTTTTAACGCATTTCCATTT
GTAATTTATTAATGATTTTGTGCCAAGTGCTAATACTTTTTAACGCATTT
CCATTGGCATCAGACTATATCAAGTTCTTGCTAACCCAATAAAAAACGGA
TATTCGAACATCTCGTTCTAACCAGGTTATTTTTTCCGCTTTAGATCTGA
CTATCCAAATAGACTTCGACCATACGTTGAGAAAGCCATAAAATCCATGA
ATCAACATTTGAGATGTGGTTACGATGTTTGGGTACCTTACAGTAACCAA
GCTCATCGTGTTGAGTTTATCAAGGATGGAGGGTTTGTTATTCGACTTAC
TATTATTTATTTCCGAGTAGATTCTGATTACTCTGCGTTGGCACGTATTC
ACTATAAAGGTTGGTACTCTGGGAGAAAATCCATAAAATGGGGGGTCAAT
ATTAAGTGATTTTGGGGTGACTTTCCCAAAAAACCCTAGGAAAATTTATG
GTCATTATAAAATTCTATTGGAGTGTGTTTTCCGACAAAAATGCAAAGTG
ACCCCCTCCCCTACAATTAAGCACAAATAAGGAGTTAGCGCACCGCTTTG
ATCTTTTCCAGTCAAATTTGGGATGAATATTAAATAAGTTGAAATATTTT
TATGGGACAAGAGATTTTCCTGAAATTGTGATCAATGCTTAAGCAAATAC
TAGTGAAACTTCTCGGGATATTCATTTTTGAATGACGGGGGATTTTTCAA
TTGTCGAAACAAAAAGTTTTTTCTCTTTTCAGTTGTTACAGTTTATTGGG
CAAAGACACCAGTGAAGGGAATAAACAACCAATCAGTATCGATGATGGAT
GCGAAGCAAAACGTGAGTGATATGCACTTTTTTCGACTGTAACCACCAAT
TGCATTTTATTTTTCGTTTTTTTCCACTAAAACCGTCCCAGTCCTTTTTT
CGCACCTATAAACAATAGAAAAATGTATCAAAAAAGGATTGGATCGAGTT
TAGGGGGTAATTAAAGGGACATTAAAGTAGTAAAATGTAAACATTGCGCG
AACCACGTGTCATTAAAAAAAACAATTAAAATCACGTGTCCAAAACAAAC
TTGTAAAACAATTGAACAATCAAAATTAGCCATATttggtttgatttttt
attttgacatgtgacatttgttttgattttgtatccgctgcatacagttt
gtttacaaatttcgcaagtactgttatgtccctttaaatacgcgcgacta
cggtcgaaaaggtgtatttttatGTTATCGTATTTTTCTGATTTACAGTC
GAGAAGTAAGCTTGTTACTCTTCACTTTTtactcacagacccggtggggg
TAAATATAACAGACCAAAACTAGATGCTTTTTTTATGGCTTGGGATTTGG
ATTTGTTTTCGAATTTAGaatatgattttgatattttgataccAATTTTT
CCAATCGGAAGGAGTCGAATctatgagaaaggggtgtataaTTCTCTTGT
GGTGATGGTGAAAGATGCATTGAAACGGGATTGACACATTCACATTGTTT
ACTGGTTCAAAAGATTTACAGTCGACATTCAACAACTCGAACATGAAAGG
GGAAAGAGGAAAAAATCATTCGAGTAAGGAGGGTTATATCATAGTCACTA
GAATTGACATTGGTTAAATTTATAGATAAACTAAATAGCCCTAAGACTTT
TTTCATGAGTTCAGGTTCTTCTGTATAAACGTCAAATGAACGTTAAAAAA
TATTACGTACCAGCACGACTGCTATATCATCATAAAACTTCTTTTCTTTT
GCTAGATATTGTTTTGCACGAAATGATGCATGCAATGGGATTCTATCATG
AACAGAATCGCTTCGATCGTGATCAATTCATCAAAATCAACTGGAACAAT
ATTCAAGACGGTAAGTTTCTTATCTCTAAATAACTTTTATCCCTGAGGTG
ATTATTCTGTCCAAAGAGCCTGTGCAGGTTTATCTTTAGGGACATGTCGT
AAATACATGGAGGACGAAAAACTAGTCTCTTGTAGGTTGTATTTAATGGA
GAAATCATCAGGAAAACATGTAATTTTAGTCCTATTCTCAGGGGTACCTT
TGATCACTAATTTTTACAACAAACGATACTATATTGGTTTTATGGATATT
CAATACTGTTTTTTTCCCGGTAAACTCAAAACCCATCAAAAATAGATAAT
TAAGAAAATTAGATATCTGAACTGGCTGAGTTTTCTCTATTTAGGTATGG
CAAGTCAGTTCGACAAAGCATCAAATAACAACATCTTCCAAACTAGCGTG
GTAAGAGTTCTCTTTCTTATTGTTCTACGGTTAACTCAAATTCGTCGATT
GGATTTCACTTCGCAAAtcttaaactttaaaaatttcataTCTTCATATC
GACTGTTTAGCGAATCAACTGAGCATGAGTTCATCTCATCTCTTTGACTA
GtgttattttaatttatttttgggACTGGAAAAGTTTTTCGCAAAAGGCG
AAAATCGGCAAATCATAAGCAGATATTATACATTTTATacaattaaattc
aaaataaatccGGGTTATGTTAAGGAACATTTCACATTATCATATATCAC
CTTTAGTAGTGTGTAGTAGCACTTATTATGTCCATCAGCTGACACGTGTT
TTGTCCTATTCAGAACTGGCAATGCAGCTTGGTGAATGAATATAGACTAC
TGACTAAACACTAAATATTAACTAATGCCTTATCGCTTTTGGTGAATGAA
CTAGCGTAGCCTTGCTCCTCAACATAATCCAATAATACGcactatacatg
ttttttagaagcattgcacttataggcatgtctaggctcagatatggcaa
aaatttaagtcTAATTTAAGCATCACCTGAAGCCTACGAATAAATgtatt
ttccagatttttgctgtttttggctGAGATTTTACGGATCTTCggaattt
tcctaaaattttgcTTGTGATATTAGCATCCTTATAAGCTTTTTTTAGCC
TTGTCAAGCCCTCGACCTAAGCATCTTCGAGCCTGTTTTCGaatttatgc
ttattaaaaaaacatgttaatGCCTCTTTTTTTTGCTATACATTACAGCC
ATATGATTACATGAGTGTTATGCACTACTCTTTGTCATCATTctctaaaa
atggtcaaaacacCATGACGATCTTGAAAAATGCTCAGAGTGCAAAGTTA
ACGGCACAGGACTTACGAATCCTTGGAGACGTTCCCGATTTATCTGCAGA
GGATTTACAAGAAGTTAGAGCTTATTTCAACTGTAAGTAtctaacacccc
tgtgtcacagacccgctgggaccccaacCTAATGAAACTTTCCCACAGCG
AAgataaaattttagaaatctttgaaaagttaGAGCTtacttcaaaaagt
ttgtcTAATAGGCCCCGATCCCCGATGAAACTTtcgaaaaatccagtggg
gatgggtttagagtgcaattttttatatttgattttggATGGggttgaaa
tcaaagtcaatttcccagtggggccgGGGTTTCAACacgtctgtgacaca
ggggtgttatctTTCAAAAGTTTGTCAAATCTATTCATATTGATATGGAA
TACCCATGTTTCATTCTGTACTTCAACAAATGTGTTATAATCTCCGACTT
TTCTCTCTCATTTTTTTCCGAAAGTATTCTTTATCATCCCTCTCTAAATC
GATCTTTAAGTGGCCAAAAATTGTCTTCGAAatagagaaagattcaaatt
acaAAGACTGTTTTATACTAATTTCAACCTGAGGTATCAATAtttcgaat
tacaaaaagattTGAATAGGAGAGACTCGAATAAGAGAGAGTTGACagta
tttcatttttgaaaacgatAACCATTAGGTAATTCTGCCGGTGGCCGAAC
AACAGCACGACCAGCACCACGAACAACAGCACGACCAGCGCCACGAACAA
CCCGAAGACCTGCAACGAATCGTCCACGAACAACCCGAGGAACAACAGAA
ACAGGAGGTGAAGCTACATGGTCATGGGTATCTGACGGATCAACAGAATC
ATATGGTACTGATGCTACAGAATCATATGGCACAGAATCATATGGTACGG
AGGCTACAGAAATTTATGGTACAGAGGCTACAGACATTTATGGTACTGAG
GGTACAGAATTTTATTGAGGCTCTCAAGGTCCAGAACTTGTCTGGAGCTG
ATAATGGAGCTGATGATGACGCTATATACTCAATGCTCTAAAGAATATTT
CATATAAAGATATCTTTCAAAGTAGGGAACAATGGATTTGATGGTTAAAA
TCTATATATTGCTATTTACTAATTTGAGATATAGATCTtatatgaattat
ttttcaagccgaaaatattttcaagttgTATTTCTATAGTTTTATATCGA
TCTATTTATTCGCTAATTTACGTAAACtttttttgtaacctttttttACA
TGTaacatttcgaaatttatttcttttgatatttacATATTCAAACTCAG
ATTCACTTTCAAACCATTTTACGAATAGACCTTGGAAAAGTCCTCTTTTA
AAAAACCAAGAAAATATGCAAAGTAAATATGTCTGTGGCCCAAAAGCTTC
TCATTGATAGCTAACTGATGGTAGGGGAGGGCACTACTTTTCTGGTGTGA
GCAAAAGCATCATCAGacaaattagttcccgcaaaaaatagTTTATTTAA
GGTAAAACATTTTACTCTTgctctttttttctcttcaaaatGGAAATTGA
TAACATTTGAAGGTTCTTTTTCAAAGTGTTTATTCTTAGATTCGTTTCtt
tattcaaaacattttaatcAATCTGACAAATCGATAAGCTCGAACTCTCC
AACAGTAGTTTCAGCTTTCGTGGTTTCTCCGAAAGTGATAGAACGAGTTT
TTGGTTGGTTTTGTTTAGCTGCTGCTTTTCTTTGTCGTGCCGACCGTCTT
CGGCTAGCCGACCTTTTTCGTTTTGCCGATGTTGATCGTTTTCGGGAAGA
AGATCTCTTACGGGAGGCAGAACGTTTTCGTTTTGCCGAGGCTGATCGTT
TTCGTGTCGGTATAGCCGACTTTTGTCGTCTAGCACGTCGCTTTTTGGAA
ACCGATCTTTTTGGTGTGCAGTATATTTCTTGAGGAACGTCGGTGGGTGG
GGTCGATGGTTTTGCCGACACAAGACGTTTTCGAGAAGTGGACTTTTTTC
TCGAGGCTGACCTCTTTCGGGATCCTGATCTTTTCTGGGAGTTTAATTTC
TTTGAAGAAGGTGTTGATTGACTTTCCGTTAAAGTTTGAACCAACTTTTT
CGTTTCTTGGTTTGTTTGCTTATTAACAACAGCCGCCGACTGGCTTCGTT
TAGCAGAACGAGAACGTTTTCGTCTTACCGAATGACTTCTGCGTACCGAT
GGTGATCGTTGTCGTGCAATACTCGGTGAACTCTTTCTTCCATAAGTTCT
ACGTCGACGATTCGATCCCGATCGTTTTCGAGATGCCGAACGTTTTTGGG
ACACTGCTCTCGGGCTTTGTGAACGAGCACGTTGACGTGAGATTGAGCGC
TGGTTACGTGAGCGGGATCGTTGTTTACGAGACATGGGACTACGTCTTCG
TGATAAAGATCGTAACCTACGACCTGGAGATCGTCCGCGTCGTCCTAAAG
ATTAAGAATAAGAACTTTGTTTAGTTTTATGGTGGAAGATGATCAACTAT
ACTATTATGTATTTGGCATGCATTAACATTACAATGTTTTCAACATCTTC
AACATAAGTTTTATACTTACTTAATGCTCTACTTCTGGTTCGCATCTTGA
AAAATGTTGCtgacaaagaaagaaaaagtcgGTGCTTTGTGCTTGTGTAT
GTACTAGATAACCGGTGGTGTTTACTTGGTTGAGAATACAGTTGTTAGAA
AGTATTGCACAAAGTTACTTGAACTCTACTTAattaaat
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_039287XLOC_039287Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00062692-exon-scaffold_371-1491911889:429574..429682TCONS_00062692-exon-scaffold_371-1491911889:429574..429682Clytia hemisphaericaexon
TCONS_00062692-exon-scaffold_371-1510915933:429574..429682TCONS_00062692-exon-scaffold_371-1510915933:429574..429682Clytia hemisphaericaexon
TCONS_00062692-exon-scaffold_371-1575043694:429574..429682TCONS_00062692-exon-scaffold_371-1575043694:429574..429682Clytia hemisphaericaexon
TCONS_00062692-exon-scaffold_371-1491911889:430131..430209TCONS_00062692-exon-scaffold_371-1491911889:430131..430209Clytia hemisphaericaexon
TCONS_00062692-exon-scaffold_371-1510915933:430131..430209TCONS_00062692-exon-scaffold_371-1510915933:430131..430209Clytia hemisphaericaexon
TCONS_00062692-exon-scaffold_371-1575043694:430131..430209TCONS_00062692-exon-scaffold_371-1575043694:430131..430209Clytia hemisphaericaexon
TCONS_00062692-exon-scaffold_371-1491911889:433427..433474TCONS_00062692-exon-scaffold_371-1491911889:433427..433474Clytia hemisphaericaexon
TCONS_00062692-exon-scaffold_371-1510915933:433427..433474TCONS_00062692-exon-scaffold_371-1510915933:433427..433474Clytia hemisphaericaexon
TCONS_00062692-exon-scaffold_371-1575043694:433427..433474TCONS_00062692-exon-scaffold_371-1575043694:433427..433474Clytia hemisphaericaexon
TCONS_00062692-exon-scaffold_371-1491911889:434169..434207TCONS_00062692-exon-scaffold_371-1491911889:434169..434207Clytia hemisphaericaexon
TCONS_00062692-exon-scaffold_371-1510915933:434169..434207TCONS_00062692-exon-scaffold_371-1510915933:434169..434207Clytia hemisphaericaexon
TCONS_00062692-exon-scaffold_371-1575043694:434169..434207TCONS_00062692-exon-scaffold_371-1575043694:434169..434207Clytia hemisphaericaexon
TCONS_00062692-exon-scaffold_371-1491911889:434517..434533TCONS_00062692-exon-scaffold_371-1491911889:434517..434533Clytia hemisphaericaexon
TCONS_00062692-exon-scaffold_371-1510915933:434517..434533TCONS_00062692-exon-scaffold_371-1510915933:434517..434533Clytia hemisphaericaexon
TCONS_00062692-exon-scaffold_371-1575043694:434517..434533TCONS_00062692-exon-scaffold_371-1575043694:434517..434533Clytia hemisphaericaexon
TCONS_00062692-exon-scaffold_371-1491911889:435605..435680TCONS_00062692-exon-scaffold_371-1491911889:435605..435680Clytia hemisphaericaexon
TCONS_00062692-exon-scaffold_371-1510915933:435605..435680TCONS_00062692-exon-scaffold_371-1510915933:435605..435680Clytia hemisphaericaexon
TCONS_00062692-exon-scaffold_371-1575043694:435605..435680TCONS_00062692-exon-scaffold_371-1575043694:435605..435680Clytia hemisphaericaexon
TCONS_00062692-exon-scaffold_371-1491911889:435988..436029TCONS_00062692-exon-scaffold_371-1491911889:435988..436029Clytia hemisphaericaexon
TCONS_00062692-exon-scaffold_371-1510915933:435988..436029TCONS_00062692-exon-scaffold_371-1510915933:435988..436029Clytia hemisphaericaexon
TCONS_00062692-exon-scaffold_371-1575043694:435988..436029TCONS_00062692-exon-scaffold_371-1575043694:435988..436029Clytia hemisphaericaexon
TCONS_00062692-exon-scaffold_371-1491911889:436311..436422TCONS_00062692-exon-scaffold_371-1491911889:436311..436422Clytia hemisphaericaexon
TCONS_00062692-exon-scaffold_371-1510915933:436311..436422TCONS_00062692-exon-scaffold_371-1510915933:436311..436422Clytia hemisphaericaexon
TCONS_00062692-exon-scaffold_371-1575043694:436311..436422TCONS_00062692-exon-scaffold_371-1575043694:436311..436422Clytia hemisphaericaexon
TCONS_00062692-exon-scaffold_371-1491911889:436768..436905TCONS_00062692-exon-scaffold_371-1491911889:436768..436905Clytia hemisphaericaexon
TCONS_00062692-exon-scaffold_371-1510915933:436768..436905TCONS_00062692-exon-scaffold_371-1510915933:436768..436905Clytia hemisphaericaexon
TCONS_00062692-exon-scaffold_371-1575043694:436768..436905TCONS_00062692-exon-scaffold_371-1575043694:436768..436905Clytia hemisphaericaexon
TCONS_00062692-exon-scaffold_371-1491911889:437356..437435TCONS_00062692-exon-scaffold_371-1491911889:437356..437435Clytia hemisphaericaexon
TCONS_00062692-exon-scaffold_371-1510915933:437356..437435TCONS_00062692-exon-scaffold_371-1510915933:437356..437435Clytia hemisphaericaexon
TCONS_00062692-exon-scaffold_371-1575043694:437356..437435TCONS_00062692-exon-scaffold_371-1575043694:437356..437435Clytia hemisphaericaexon
TCONS_00062692-exon-scaffold_371-1491911889:438379..438483TCONS_00062692-exon-scaffold_371-1491911889:438379..438483Clytia hemisphaericaexon
TCONS_00062692-exon-scaffold_371-1510915933:438379..438483TCONS_00062692-exon-scaffold_371-1510915933:438379..438483Clytia hemisphaericaexon
TCONS_00062692-exon-scaffold_371-1575043694:438379..438483TCONS_00062692-exon-scaffold_371-1575043694:438379..438483Clytia hemisphaericaexon
TCONS_00062692-exon-scaffold_371-1491911889:438818..438873TCONS_00062692-exon-scaffold_371-1491911889:438818..438873Clytia hemisphaericaexon
TCONS_00062692-exon-scaffold_371-1510915933:438818..438873TCONS_00062692-exon-scaffold_371-1510915933:438818..438873Clytia hemisphaericaexon
TCONS_00062692-exon-scaffold_371-1575043694:438818..438873TCONS_00062692-exon-scaffold_371-1575043694:438818..438873Clytia hemisphaericaexon
TCONS_00062692-exon-scaffold_371-1491911889:439672..439855TCONS_00062692-exon-scaffold_371-1491911889:439672..439855Clytia hemisphaericaexon
TCONS_00062692-exon-scaffold_371-1510915933:439672..439855TCONS_00062692-exon-scaffold_371-1510915933:439672..439855Clytia hemisphaericaexon
TCONS_00062692-exon-scaffold_371-1575043694:439672..439855TCONS_00062692-exon-scaffold_371-1575043694:439672..439855Clytia hemisphaericaexon
TCONS_00062692-exon-scaffold_371-1491911889:440452..442512TCONS_00062692-exon-scaffold_371-1491911889:440452..442512Clytia hemisphaericaexon
TCONS_00062692-exon-scaffold_371-1510915933:440452..442512TCONS_00062692-exon-scaffold_371-1510915933:440452..442512Clytia hemisphaericaexon
TCONS_00062692-exon-scaffold_371-1575043694:440452..442512TCONS_00062692-exon-scaffold_371-1575043694:440452..442512Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_371supercontigscaffold_371:429574..442512 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.52395e-07	1.23997e-07	0.000344598	9.95576e-06	0.00197156	3.57124e-08	0.150471	0	0	0.00391635	0	0.185034	0	0	0	7.20549e-07	68.5186	69.6375	0	0	148.233	138.213	13.197	9.38118	0.144644	0.0025419	47.4941	55.0066	3.34557e-06	4.20622e-07
Blast
[Close]
BLAST of TCONS_00062692 vs. Swiss-Prot (Human)
Match: ASTL (Astacin-like metalloendopeptidase OS=Homo sapiens GN=ASTL PE=1 SV=4)

HSP 1 Score: 109.768 bits (273), Expect = 3.708e-25
Identity = 73/229 (31.88%), Postives = 114/229 (49.78%), Query Frame = 2 
Query:  416 KNDIIESENRKRNSVKINLWNPTQPGEKLVIPYSFRSDY--PNRLRPYVEKAIKSMNQHLRCGYDVWVPYSNQAHRVEFIKDGGCYSLLGKDTSEGNKQPISIDDGC--EAKHIVLHEMMHAMGFYHEQNRFDRDQFIKINWNNIQDGMASQFDKASNNNIFQTSVPYDYMSVMHYSLSSFSKNGQNTMTILKNAQSAKLTAQDLRILGDVPDLSAEDLQEVRAYFNCN 1090
            + DII     +  S   N W P      + +P+   S Y  P+R     +  ++++ +  R     +V Y +Q   +  I   GC+S +G+    G  Q +S+   C  + + IVLHE+MH +GF+HE  R DRD++I++NWN I  G    F K+ ++N+     PYDY SVMHY   +FS+ G  T+T         L A  + I G   +LSA D+  V   + C+
Sbjct:   75 EGDIIRPSPFRLLSATSNKW-PMGGSGVVEVPFLLSSKYDEPSR-----QVILEALAEFERSTCIRFVTYQDQRDFISIIPMYGCFSSVGRS---GGMQVVSLAPTCLQKGRGIVLHELMHVLGFWHEHTRADRDRYIRVNWNEILPGFEINFIKSQSSNML---TPYDYSSVMHYGRLAFSRRGLPTIT--------PLWAPSVHI-GQRWNLSASDITRVLKLYGCS 282
The following BLAST results are available for this feature:
BLAST of TCONS_00062692 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ASTL3.708e-2531.88Astacin-like metalloendopeptidase OS=Homo sapiens ... [more]
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