TCONS_00062689 (transcript) - C. hemisphaerica

Overview
NameTCONS_00062689
Unique NameTCONS_00062689
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3226

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00062689 ID=TCONS_00062689|Name=TCONS_00062689|organism=Clytia hemisphaerica|type=transcript|length=3226bp
CTTTCCTATACATAATTAATTGAATTTTATTAAAGATACGAAACTATAAA
TAGCGGTGACTACTTTCTATTAAATTAAAGCCTTTCTTCTGACATAGTCC
GAGAGAGTCGCAAGGaagggaatttttttcaaaaattcagatttttagTT
GTGCTCCATCAAAGTCATCAATAATTGGAACAGGAACAgGTACATTCTCA
AAAAATGAAGCTGATATTCTTGGCTGTATCACTTATAGTGGTTACACTTG
ATGCTTTACCAAAACACGGCGTCTTTCGACCCCCGACGGAAATTGAAGTC
AACGAGAAATTTTATCATCGACATGGAGATATTGAGCGAATCCAACATAA
TGATGTGTCCAACTTCAAACGCCTTGCAAAGAAATTGAAACACATCATTG
GAGAGACGAAAGTGTTGAAACGAGTACTTGACTCAAGGAAGAAATTTGGT
CACTTGAAAAGCGTAGCTGACGTCAACTACCATAGATACGGCCGAAAGAA
CGATATAATAGAAAGTGAAAACCGTAAACGAAACAGCGTCAAAATCAACC
TTTGGAATCCAACACAACCCGGAGAAAAATTAGTCATACCATACTCTTTC
AGATCTGACTATCCAAATAGACTTCGACCATACGTTGAGAAAGCCATAAA
ATCCATGAATCAACATTTGAGATGTGGTTACGATGTTTGGGTACCTTACA
GTAACCAAGCTCATCGTGTTGAGTTTATCAAGGATGGAGGTTGTTACAGT
TTATTGGGCAAAGACACCAGTGAAGGGAATAAACAACCAATCAGTATCGA
TGATGGATGCGAAGCAAAACATATTGTTTTGCACGAAATGATGCATGCAA
TGGGATTCTATCATGAACAGAATCGCTTCGATCGTGATCAATTCATCAAA
ATCAACTGGAACAATATTCAAGACGGTATGGCAAGTCAGTTCGACAAAGC
ATCAAATAACAACATCTTCCAAACTAGCGTGCCATATGATTACATGAGTG
TTATGCACTACTCTTTGTCATCATTctctaaaaatggtcaaaacacCATG
ACGATCTTGAAAAATGCTCAGAGTGCAAAGTTAACGGCACAGGACTTACG
AATCCTTGGAGACGTTCCCGATTTATCTGCAGAGGATTTACAAGAAGTTA
GAGCTTATTTCAACTGTAATTCTGCCGGTGGCCGAACAACAGCACGACCA
GCACCACGAACAACAGCACGACCAGCGCCACGAACAACCCGAAGACCTGC
AACGAATCGTCCACGAACAACCCGAGGAACAACAGAAACAGGAGGTGAAG
CTACATGGTCATGGGTATCTGACGGATCAACAGAATCATATGGTACTGAT
GCTACAGAATCATATGGCACAGAATCATATGGTACGGAGGCTACAGAAAT
TTATGGTACAGAGGCTACAGACATTTATGGTACTGAGGGTACAGAATTTT
ATTGAGGCTCTCAAGGTCCAGAACTTGTCTGGAGCTGATAATGGAGCTGA
TGATGACGCTATATACTCAATGCTCTAAAGAATATTTCATATAAAGATAT
CTTTCAAAGTAGGGAACAATGGATTTGATGGTTAAAATCTATATATTGCT
ATTTACTAATTTGAGATATAGATCTtatatgaattatttttcaagccgaa
aatattttcaagttgTATTTCTATAGTTTTATATCGATCTATTTATTCGC
TAATTTACGTAAACtttttttgtaacctttttttACATGTaacatttcga
aatttatttcttttgatatttacATATTCAAACTCAGATTCACTTTCAAA
CCATTTTACGAATAGACCTTGGAAAAGTCCTCTTTTAAAAAACCAAGAAA
ATATGCAAAGTAAATATGTCTGTGGCCCAAAAGCTTCTCATTGATAGCTA
ACTGATGGTAGGGGAGGGCACTACTTTTCTGGTGTGAGCAAAAGCATCAT
CAGacaaattagttcccgcaaaaaatagTTTATTTAAGGTAAAACATTTT
ACTCTTgctctttttttctcttcaaaatGGAAATTGATAACATTTGAAGG
TTCTTTTTCAAAGTGTTTATTCTTAGATTCGTTTCtttattcaaaacatt
ttaatcAATCTGACAAATCGATAAGCTCGAACTCTCCAACAGTAGTTTCA
GCTTTCGTGGTTTCTCCGAAAGTGATAGAACGAGTTTTTGGTTGGTTTTG
TTTAGCTGCTGCTTTTCTTTGTCGTGCCGACCGTCTTCGGCTAGCCGACC
TTTTTCGTTTTGCCGATGTTGATCGTTTTCGGGAAGAAGATCTCTTACGG
GAGGCAGAACGTTTTCGTTTTGCCGAGGCTGATCGTTTTCGTGTCGGTAT
AGCCGACTTTTGTCGTCTAGCACGTCGCTTTTTGGAAACCGATCTTTTTG
GTGTGCAGTATATTTCTTGAGGAACGTCGGTGGGTGGGGTCGATGGTTTT
GCCGACACAAGACGTTTTCGAGAAGTGGACTTTTTTCTCGAGGCTGACCT
CTTTCGGGATCCTGATCTTTTCTGGGAGTTTAATTTCTTTGAAGAAGGTG
TTGATTGACTTTCCGTTAAAGTTTGAACCAACTTTTTCGTTTCTTGGTTT
GTTTGCTTATTAACAACAGCCGCCGACTGGCTTCGTTTAGCAGAACGAGA
ACGTTTTCGTCTTACCGAATGACTTCTGCGTACCGATGGTGATCGTTGTC
GTGCAATACTCGGTGAACTCTTTCTTCCATAAGTTCTACGTCGACGATTC
GATCCCGATCGTTTTCGAGATGCCGAACGTTTTTGGGACACTGCTCTCGG
GCTTTGTGAACGAGCACGTTGACGTGAGATTGAGCGCTGGTTACGTGAGC
GGGATCGTTGTTTACGAGACATGGGACTACGTCTTCGTGATAAAGATCGT
AACCTACGACCTGGAGATCGTCCGCGTCGTCCTAAAGATTAAGAATAAGA
ACTTTGTTTAGTTTTATGGTGGAAGATGATCAACTATACTATTATGTATT
TGGCATGCATTAACATTACAATGTTTTCAACATCTTCAACATAAGTTTTA
TACTTACTTAATGCTCTACTTCTGGTTCGCATCTTGAAAAATGTTGCtga
caaagaaagaaaaagtcgGTGCTTTGTGCTTGTGTATGTACTAGATAACC
GGTGGTGTTTACTTGGTTGAGAATACAGTTGTTAGAAAGTATTGCACAAA
GTTACTTGAACTCTACTTAattaaat
Run BLAST on NCBI

transcript from alignment at scaffold_371:429494..442512+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00062689 ID=TCONS_00062689|Name=TCONS_00062689|organism=Clytia hemisphaerica|type=transcript|length=13019bp|location=Sequence derived from alignment at scaffold_371:429494..442512+ (Clytia hemisphaerica)
CTTTCCTATACATAATTAATTGAATTTTATTAAAGATACGAAACTATAAA
TAGCGGTGACTACTTTCTATTAAATTAAAGCCTTTCTTCTGACATAGTCC
GAGAGAGTCGCAAGGaagggaatttttttcaaaaattcagatttttagTT
GTGCTCCATCAAAGTCATCAATAATTGGAACAGGAACAggtacaaaaaaa
attttatttagttttatACACCCCTGGTTCAGTGACGTTTTGGAGGGTTT
CGCGGCAGATAGGGAAATCCAGGGAAATCCCCACAGCAAGgatgaatttt
ttatcaaattcccAATTGTGATAGAAATTCAACCTAAAAATACAATGCGG
ATGGTTTAAGTGAGCAATTTTTGCATTGAACTTTAAATGGGGTGGACAAT
TGGGCTGAAATTGCATTTaattagggtatttttcccactggGGATGAAAC
TTTGACTAAATTTCCCAGAGGGTGGGGTCCTGCCATGTATGTGACACATG
TCTGTTTATACTTGGTACTCGTACCAGGCTTATCTTGCATCTATatggca
atgaattttaaaatatcATTATGTCATTATAAATAGGACACTGACTTACC
TCGTTATTTTCCAATTCAATTCTTTTCTATCATCTAGGTACATTCTCAAA
AAATGAAGCTGATATTCTTGGCTGTATCACTTATAGTGGTTACACTTGAT
GCTTTACCAAAACACGGTATGATATTTTTTTAGTATCTGTTGACTAATCT
GggtttaactaaggctccagtacagcgctaTAAGACCTTTTGATAGACTG
GGTGATTAGTAACTTAAGTGGACTCAGCGtcatgaaaaattataaatttt
cattaattttgcggatttgggGGCGCCATGCGCGAAATTAAGTCTcgatg
gaaatttggaaagtcCTTATCCACGAAGAATGTTTAAGCTAAACTCAAAA
CTTGTAAATTTATAGTAAATTCATACTTGCCTTTACCAACTCTTAGCCTT
CTAGTCTCTATCTAGTTACAACCGGTCTCAGTATTTTTAATGAACATCAT
ATTTTTTATACGCTACATATATATTTATCATACTCAATATCCAGGTGAAG
AGCCAATTGTAAAACTTtggatatacacgtttttttttttaagaaactag
ttttaccaagcaggctcaatgtttcttaagaaatcggccttttgagcctt
aaatgtttcttacatgtttctaaactttgtcaagcttaaaggacgcattt
cgataatacaatagtctaattgactacacgcttctttttttttataagaa
tacactttataagaatgtccatgatgaaaatggccaaaaaactaagaata
tgctaagaatatcaccatcatggaattttgctactNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNtaaattatcaattatccccaagttaggctcactc
cttttacaaaagtgccattttatgcttgagacgtatgtactaaatgttaa
atctagtatgaataAGGATGAATgaatgtgctgtaagaatattttaggat
gattttcccaaaaaagttaagaatattaatgatgaaatggatttacacca
ttcttataaaaaaaaaaaagcgtgtaatctacggtactttcctatcttct
atattgattttctgactttctcaagtgtttctaactgttatgtatgtata
tttctggaaccttgattgaaaggttcttaaaaaaaACGAgttaaaaatgc
tattttctcattctcagcctcagcatgtttcttagatgtttcttagtttt
taggcattctgagcctcatgtttcttaaaagtgtgtttcttaaaaaaaaa
acgtgtactgtgaAATATatcgttattattattattatttgagaTATATT
TTGATGTTTCGATAATGcactattttttatttatgaaaGTTTTCCTTCTA
TCGAAGATAGATTAGGTACACTTTTTCTATTGAAATATTAgaacaagaaa
taaaaaataagaaaaattgaatattaagTCTCGATGGAATATCTTAGTAA
ACGATTTTGTAAATATCTTAATAAGAGAGATACACCTTTACTTAccgaga
aatttttcaaagtcttgCAAAACTATCATTTTGCGTGTCCTTTTCTTATT
TAAAGAgccaaaatgaagaaatttagGTTTAATACCctatttttactatt
ttgacccttaatttgaataaaaatttactCAGTATTGTTCttagattgtt
cttatttttgtgccttgttgttcttataaaatcattcttataaaaaaggc
taTATTTTACTAAATTAGTTTTTAAATCACAGCAGAACCAGTGAGTAATC
CTCCGTTTTATGCTGGATACttccagggatatgttatagcgtagctggat
aacgcacatttgaaaaagccttgtcctatctctgtccctgacattaaaat
ttgatatgaaattaaacttttttaattacaaattcgtgaaatttggattt
ctttttagccaatgattctgctgctgcattNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNacatccga
aatttttaaagagaaaccatgaaagcttctcaaattcataacacacgctg
ataaaattagatttcatttacaaagaagcttttggggtatctttttcaaa
tattattttgatgaaaagcgggaacatcatagcaaaatatatgcaaacgt
actgcatgaatactttgtctgcttaatttttcttataaaaacagagcACT
ttaggggacagagatggatttttattatgaacagtttacaatagaaaaga
caaaggagcaatccgctaaggaattctcgtccttcatccagctacgctat
aacatatccctgatacttctaaactttgatgaaaatcaaaacGCGACTTA
AAACGCCTAATTTATACTTCATCTCATCTTCGGCCAGACATTTGTTTATA
CACTTTAAAGGGCGGTTTAACAAGACCCTTTTTAGACTATGACTTTTTTC
CATTGTTCAGCGATATTGCAATCTTTTTTCCAGGCGTCTTTCGACCCCCG
ACGGAAATTGAAGTCAACGAGAAATTTTATCGTAAGTGATAGTACGCATA
CTTTACACAATGTTTTATAAAAAGGTCATACCCATTTCTTAACCATTTAA
GTACCAACCcttcctgtaatgcccagtttgagttagaaatcgtcattctt
ggtcgtaggaattggattgggtttcatggtcaagcaaaaaaaaaatcaaa
agtaaaaaagacttttccaatgagaaaaaagaaagtaagaaaaatgcaaa
gatttgacaaaaatccacttttttaagattttgaccgtttttgaccattt
tcggTCAACGAGtaatccaagaacctccaaaattAGCCCTGCtgtacttg
attctgtcctctagcgaattaatttgaatttttactaCTGGGCTCCTTtt
tatcattcaggcaggtccacCTAAATCTCTtaagctatccaacggactAT
AAACGAGCTACAAACTCCTTCTAGCTCCGGAGacataagcctttaaagtt
tgaactagcaattttctttgaaaaatgaccgtggtacttaaagggttaag
ctGTTAAATTCTTTCTTGATTTAAGTCCACTCAGCCTTTTTCCTTGACAC
ATTTTTTAAACTGAATGATCACGAAATACTATATGATTTATGCTGATATA
TCCAACTATATCTTAATCTTAATCTATCTTAATCTTCTAAACAGgccttt
tatttaatttttctgttTACTTTAGATCGACATGGAGATATTGAGCGAAT
CCAACATAATGATGGTAAGACTTTATTCCGGGAGGTTTACGATTTTATTG
CAGCCGTTGCAGCTTGGCCTAATTAAGCCCTATTTACATTCTGATTTAGA
AGTTGATCAAATTATCTTGGTAACCATGGCTTTGTATACATCTTTAGACA
TGCCCAGTATTGTCCACATAATCAATAGTTGACTTAAACTATGATTTGAA
ACTGGACTTCATGGCGTCTCCGTCCCAATCTTCGATCGAAATTAATCTAT
AGTATTAGGTCTTTTTATGACTCCTTTTAACCACTATCCTAATTTCCTAT
TCTTCTTTCTCTCCAAACTGTAGTGTCCAACTTCAAACGCCTTGCAAAGA
AATTGAAACACATCATTGGAGAGACGAAAGTGTTGAAACGAGTACTTGAT
ACAAGGAAGAAATTTGGTACGTTTCAAAGCTTAACCCGCTTTTTATCAGG
GGAGGGGTGATTTCCACCACCTTGGTGGTTGGTGGTTTTTTGTTAATAGc
tcacagaaaaaaactttttttgacactgaaactttttgacatttaaCATA
ATCCTAATATGTATACCAAATGTTATCATCATACACCCactagatcaggt
tttatgactgaGTATTTTGATTTTGTGTGGGCGTGTCATAAAGTCCaact
aaaaccctgtaaaatctcaaagttgaaattttcggTAAAAACCGACacta
atttcattgttttttaacTTGTCCCCAGGTCACTTGAAAAGCGTAGCTGA
CGTCAACTACCATAGATACGGTATAATTCTtagttttgatatttaaatat
tttatatatgttaacgatttgacataaaaaatttgcaccttgggtaggct
gctggcatctaCTAAAGgatatactacctggggttttgtagaggtagGCT
ATTCAGACTATGCAAGTTGGGTGGAGTGGAAAAACTCAATTTAGTTACCA
TTCCTGAGTGTTTTTATAAGGTCAGACCATTTCATTCTTATCAATCTTGT
TCCTAGGTTATGAAGTCAGTAAGCAAATTAAAGCGGTGCCGGCGGcgtta
cttaatttttttttctaactcGCTTTGACAGGCCGAAAGAACGATATAAT
AGAAAGTGAAAATCGTAAACGAAACAGCGTCAAAATCAACCTTTGGAATC
CAACACAACCCGGAGAACGATTAGTCATACCATACTCTTTCAGGTAAGAT
GAAATCTTTCTCGTTAATTTTGCATTTAGCTGCAGTCTTTGTNTAATAGT
TGACTTAAACTATGATTTGAAACTGGACTTCATGGCGTCTCCGTCCCAAT
CATCGATCGAAATTAATCTATAGTATTAGGTCTTTTTATGACTCCTTTTT
ACCACTATCCTAATTTCCTATTTTTCTTTCCCTCCAAACTGTAGTGTCCA
ACTTCAAACGCCTTGCAAAGAAATTGAAACACATCATTGGAGAGACGAAA
GTGTTGAAACGAGTACTTGACTCAAGGAAGAAATTTGGTGCGTTTCAAAG
CTTAACCCGCTTTTTATCAGGGGAGGGGTGATTTCCACCACCTTGGTGGT
TGGTGGTTTTTTGTTAATAGctcacagaaaaaaactttttttgacactga
aactttttgacatttaaCATAATCCTAATATGTATACCAAATATTATCAT
CATAAACCCACTAGATTAGGTTTTATGACTGAGTATTTTGTGCGGGCGTG
TCATAAAGTCCaactaaaaccctgtaaaatctcAAATGTTGAAATTTTCG
GTAAGAACCGACactaatttcattgttttttaactcgtCTCCAGGTCACT
TGAAAAGCGTAGCTGACGTCAACTACCATAGATACGGTATAATTCTTAGT
TTTAATATTTAAACATTTTATATATGTCAACGATTTGACATAAAGAATTT
GCACCTTGGGTAGACTGCTTGCATCCACTAAAGGATTTGTGCTCCTTAtt
tactacctggggttttgatGTAGGCTATTCAGACTATGCACCTTGGGTGG
AGTGGAAAAACTCAATTTAATTACCATTTTATGCTtccctacacaaattt
tgcacccctCCTGTCTGCGCTACTATAATGCGTTAGTTAATTTCTTTATC
ATATCTCGCTTCGACAGGCCGAAAGAACGATATAATAGAAAGTGAAAACC
GTAAACGAAACAGCGTCAAAATCAACCTTTGGAATCCAACACAACCCGGA
GAAAAATTAGTCATACCATACTCTTTCAGGTAAGGTGAAATTTATCTCGT
TAATTTTGCATTTAATTGCAGACTTTTTTGTGGTATTCTCAAAGTGTTCT
CataattcaaaatcaattttaatttattaaTGATTTTGTGCCAAGTGCTA
ATACTTTTTAACGCATTTCCATTTGTAATTTATTAATGATTTTGTGCCAA
GTGCTAATACTTTTTAACGCATTTCCATTTGTAATTTATTAATGATTTTG
TGCCAAGTGCTAATACTTTTTAACGCATTTCCATTGGCATCAGACTATAT
CAAGTTCTTGCTAACCCAATAAAAAACGGATATTCGAACATCTCGTTCTA
ACCAGGTTATTTTTTCCGCTTTAGATCTGACTATCCAAATAGACTTCGAC
CATACGTTGAGAAAGCCATAAAATCCATGAATCAACATTTGAGATGTGGT
TACGATGTTTGGGTACCTTACAGTAACCAAGCTCATCGTGTTGAGTTTAT
CAAGGATGGAGGGTTTGTTATTCGACTTACTATTATTTATTTCCGAGTAG
ATTCTGATTACTCTGCGTTGGCACGTATTCACTATAAAGGTTGGTACTCT
GGGAGAAAATCCATAAAATGGGGGGTCAATATTAAGTGATTTTGGGGTGA
CTTTCCCAAAAAACCCTAGGAAAATTTATGGTCATTATAAAATTCTATTG
GAGTGTGTTTTCCGACAAAAATGCAAAGTGACCCCCTCCCCTACAATTAA
GCACAAATAAGGAGTTAGCGCACCGCTTTGATCTTTTCCAGTCAAATTTG
GGATGAATATTAAATAAGTTGAAATATTTTTATGGGACAAGAGATTTTCC
TGAAATTGTGATCAATGCTTAAGCAAATACTAGTGAAACTTCTCGGGATA
TTCATTTTTGAATGACGGGGGATTTTTCAATTGTCGAAACAAAAAGTTTT
TTCTCTTTTCAGTTGTTACAGTTTATTGGGCAAAGACACCAGTGAAGGGA
ATAAACAACCAATCAGTATCGATGATGGATGCGAAGCAAAACGTGAGTGA
TATGCACTTTTTTCGACTGTAACCACCAATTGCATTTTATTTTTCGTTTT
TTTCCACTAAAACCGTCCCAGTCCTTTTTTCGCACCTATAAACAATAGAA
AAATGTATCAAAAAAGGATTGGATCGAGTTTAGGGGGTAATTAAAGGGAC
ATTAAAGTAGTAAAATGTAAACATTGCGCGAACCACGTGTCATTAAAAAA
AACAATTAAAATCACGTGTCCAAAACAAACTTGTAAAACAATTGAACAAT
CAAAATTAGCCATATttggtttgattttttattttgacatgtgacatttg
ttttgattttgtatccgctgcatacagtttgtttacaaatttcgcaagta
ctgttatgtccctttaaatacgcgcgactacggtcgaaaaggtgtatttt
tatGTTATCGTATTTTTCTGATTTACAGTCGAGAAGTAAGCTTGTTACTC
TTCACTTTTtactcacagacccggtgggggTAAATATAACAGACCAAAAC
TAGATGCTTTTTTTATGGCTTGGGATTTGGATTTGTTTTCGAATTTAGaa
tatgattttgatattttgataccAATTTTTCCAATCGGAAGGAGTCGAAT
ctatgagaaaggggtgtataaTTCTCTTGTGGTGATGGTGAAAGATGCAT
TGAAACGGGATTGACACATTCACATTGTTTACTGGTTCAAAAGATTTACA
GTCGACATTCAACAACTCGAACATGAAAGGGGAAAGAGGAAAAAATCATT
CGAGTAAGGAGGGTTATATCATAGTCACTAGAATTGACATTGGTTAAATT
TATAGATAAACTAAATAGCCCTAAGACTTTTTTCATGAGTTCAGGTTCTT
CTGTATAAACGTCAAATGAACGTTAAAAAATATTACGTACCAGCACGACT
GCTATATCATCATAAAACTTCTTTTCTTTTGCTAGATATTGTTTTGCACG
AAATGATGCATGCAATGGGATTCTATCATGAACAGAATCGCTTCGATCGT
GATCAATTCATCAAAATCAACTGGAACAATATTCAAGACGGTAAGTTTCT
TATCTCTAAATAACTTTTATCCCTGAGGTGATTATTCTGTCCAAAGAGCC
TGTGCAGGTTTATCTTTAGGGACATGTCGTAAATACATGGAGGACGAAAA
ACTAGTCTCTTGTAGGTTGTATTTAATGGAGAAATCATCAGGAAAACATG
TAATTTTAGTCCTATTCTCAGGGGTACCTTTGATCACTAATTTTTACAAC
AAACGATACTATATTGGTTTTATGGATATTCAATACTGTTTTTTTCCCGG
TAAACTCAAAACCCATCAAAAATAGATAATTAAGAAAATTAGATATCTGA
ACTGGCTGAGTTTTCTCTATTTAGGTATGGCAAGTCAGTTCGACAAAGCA
TCAAATAACAACATCTTCCAAACTAGCGTGGTAAGAGTTCTCTTTCTTAT
TGTTCTACGGTTAACTCAAATTCGTCGATTGGATTTCACTTCGCAAAtct
taaactttaaaaatttcataTCTTCATATCGACTGTTTAGCGAATCAACT
GAGCATGAGTTCATCTCATCTCTTTGACTAGtgttattttaatttatttt
tgggACTGGAAAAGTTTTTCGCAAAAGGCGAAAATCGGCAAATCATAAGC
AGATATTATACATTTTATacaattaaattcaaaataaatccGGGTTATGT
TAAGGAACATTTCACATTATCATATATCACCTTTAGTAGTGTGTAGTAGC
ACTTATTATGTCCATCAGCTGACACGTGTTTTGTCCTATTCAGAACTGGC
AATGCAGCTTGGTGAATGAATATAGACTACTGACTAAACACTAAATATTA
ACTAATGCCTTATCGCTTTTGGTGAATGAACTAGCGTAGCCTTGCTCCTC
AACATAATCCAATAATACGcactatacatgttttttagaagcattgcact
tataggcatgtctaggctcagatatggcaaaaatttaagtcTAATTTAAG
CATCACCTGAAGCCTACGAATAAATgtattttccagatttttgctgtttt
tggctGAGATTTTACGGATCTTCggaattttcctaaaattttgcTTGTGA
TATTAGCATCCTTATAAGCTTTTTTTAGCCTTGTCAAGCCCTCGACCTAA
GCATCTTCGAGCCTGTTTTCGaatttatgcttattaaaaaaacatgttaa
tGCCTCTTTTTTTTGCTATACATTACAGCCATATGATTACATGAGTGTTA
TGCACTACTCTTTGTCATCATTctctaaaaatggtcaaaacacCATGACG
ATCTTGAAAAATGCTCAGAGTGCAAAGTTAACGGCACAGGACTTACGAAT
CCTTGGAGACGTTCCCGATTTATCTGCAGAGGATTTACAAGAAGTTAGAG
CTTATTTCAACTGTAAGTAtctaacacccctgtgtcacagacccgctggg
accccaacCTAATGAAACTTTCCCACAGCGAAgataaaattttagaaatc
tttgaaaagttaGAGCTtacttcaaaaagtttgtcTAATAGGCCCCGATC
CCCGATGAAACTTtcgaaaaatccagtggggatgggtttagagtgcaatt
ttttatatttgattttggATGGggttgaaatcaaagtcaatttcccagtg
gggccgGGGTTTCAACacgtctgtgacacaggggtgttatctTTCAAAAG
TTTGTCAAATCTATTCATATTGATATGGAATACCCATGTTTCATTCTGTA
CTTCAACAAATGTGTTATAATCTCCGACTTTTCTCTCTCATTTTTTTCCG
AAAGTATTCTTTATCATCCCTCTCTAAATCGATCTTTAAGTGGCCAAAAA
TTGTCTTCGAAatagagaaagattcaaattacaAAGACTGTTTTATACTA
ATTTCAACCTGAGGTATCAATAtttcgaattacaaaaagattTGAATAGG
AGAGACTCGAATAAGAGAGAGTTGACagtatttcatttttgaaaacgatA
ACCATTAGGTAATTCTGCCGGTGGCCGAACAACAGCACGACCAGCACCAC
GAACAACAGCACGACCAGCGCCACGAACAACCCGAAGACCTGCAACGAAT
CGTCCACGAACAACCCGAGGAACAACAGAAACAGGAGGTGAAGCTACATG
GTCATGGGTATCTGACGGATCAACAGAATCATATGGTACTGATGCTACAG
AATCATATGGCACAGAATCATATGGTACGGAGGCTACAGAAATTTATGGT
ACAGAGGCTACAGACATTTATGGTACTGAGGGTACAGAATTTTATTGAGG
CTCTCAAGGTCCAGAACTTGTCTGGAGCTGATAATGGAGCTGATGATGAC
GCTATATACTCAATGCTCTAAAGAATATTTCATATAAAGATATCTTTCAA
AGTAGGGAACAATGGATTTGATGGTTAAAATCTATATATTGCTATTTACT
AATTTGAGATATAGATCTtatatgaattatttttcaagccgaaaatattt
tcaagttgTATTTCTATAGTTTTATATCGATCTATTTATTCGCTAATTTA
CGTAAACtttttttgtaacctttttttACATGTaacatttcgaaatttat
ttcttttgatatttacATATTCAAACTCAGATTCACTTTCAAACCATTTT
ACGAATAGACCTTGGAAAAGTCCTCTTTTAAAAAACCAAGAAAATATGCA
AAGTAAATATGTCTGTGGCCCAAAAGCTTCTCATTGATAGCTAACTGATG
GTAGGGGAGGGCACTACTTTTCTGGTGTGAGCAAAAGCATCATCAGacaa
attagttcccgcaaaaaatagTTTATTTAAGGTAAAACATTTTACTCTTg
ctctttttttctcttcaaaatGGAAATTGATAACATTTGAAGGTTCTTTT
TCAAAGTGTTTATTCTTAGATTCGTTTCtttattcaaaacattttaatcA
ATCTGACAAATCGATAAGCTCGAACTCTCCAACAGTAGTTTCAGCTTTCG
TGGTTTCTCCGAAAGTGATAGAACGAGTTTTTGGTTGGTTTTGTTTAGCT
GCTGCTTTTCTTTGTCGTGCCGACCGTCTTCGGCTAGCCGACCTTTTTCG
TTTTGCCGATGTTGATCGTTTTCGGGAAGAAGATCTCTTACGGGAGGCAG
AACGTTTTCGTTTTGCCGAGGCTGATCGTTTTCGTGTCGGTATAGCCGAC
TTTTGTCGTCTAGCACGTCGCTTTTTGGAAACCGATCTTTTTGGTGTGCA
GTATATTTCTTGAGGAACGTCGGTGGGTGGGGTCGATGGTTTTGCCGACA
CAAGACGTTTTCGAGAAGTGGACTTTTTTCTCGAGGCTGACCTCTTTCGG
GATCCTGATCTTTTCTGGGAGTTTAATTTCTTTGAAGAAGGTGTTGATTG
ACTTTCCGTTAAAGTTTGAACCAACTTTTTCGTTTCTTGGTTTGTTTGCT
TATTAACAACAGCCGCCGACTGGCTTCGTTTAGCAGAACGAGAACGTTTT
CGTCTTACCGAATGACTTCTGCGTACCGATGGTGATCGTTGTCGTGCAAT
ACTCGGTGAACTCTTTCTTCCATAAGTTCTACGTCGACGATTCGATCCCG
ATCGTTTTCGAGATGCCGAACGTTTTTGGGACACTGCTCTCGGGCTTTGT
GAACGAGCACGTTGACGTGAGATTGAGCGCTGGTTACGTGAGCGGGATCG
TTGTTTACGAGACATGGGACTACGTCTTCGTGATAAAGATCGTAACCTAC
GACCTGGAGATCGTCCGCGTCGTCCTAAAGATTAAGAATAAGAACTTTGT
TTAGTTTTATGGTGGAAGATGATCAACTATACTATTATGTATTTGGCATG
CATTAACATTACAATGTTTTCAACATCTTCAACATAAGTTTTATACTTAC
TTAATGCTCTACTTCTGGTTCGCATCTTGAAAAATGTTGCtgacaaagaa
agaaaaagtcgGTGCTTTGTGCTTGTGTATGTACTAGATAACCGGTGGTG
TTTACTTGGTTGAGAATACAGTTGTTAGAAAGTATTGCACAAAGTTACTT
GAACTCTACTTAattaaat
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_039287XLOC_039287Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00062689-exon-scaffold_371-1491911889:429494..429682TCONS_00062689-exon-scaffold_371-1491911889:429494..429682Clytia hemisphaericaexon
TCONS_00062689-exon-scaffold_371-1510915933:429494..429682TCONS_00062689-exon-scaffold_371-1510915933:429494..429682Clytia hemisphaericaexon
TCONS_00062689-exon-scaffold_371-1575043694:429494..429682TCONS_00062689-exon-scaffold_371-1575043694:429494..429682Clytia hemisphaericaexon
TCONS_00062689-exon-scaffold_371-1491911889:430131..430209TCONS_00062689-exon-scaffold_371-1491911889:430131..430209Clytia hemisphaericaexon
TCONS_00062689-exon-scaffold_371-1510915933:430131..430209TCONS_00062689-exon-scaffold_371-1510915933:430131..430209Clytia hemisphaericaexon
TCONS_00062689-exon-scaffold_371-1575043694:430131..430209TCONS_00062689-exon-scaffold_371-1575043694:430131..430209Clytia hemisphaericaexon
TCONS_00062689-exon-scaffold_371-1491911889:433427..433474TCONS_00062689-exon-scaffold_371-1491911889:433427..433474Clytia hemisphaericaexon
TCONS_00062689-exon-scaffold_371-1510915933:433427..433474TCONS_00062689-exon-scaffold_371-1510915933:433427..433474Clytia hemisphaericaexon
TCONS_00062689-exon-scaffold_371-1575043694:433427..433474TCONS_00062689-exon-scaffold_371-1575043694:433427..433474Clytia hemisphaericaexon
TCONS_00062689-exon-scaffold_371-1491911889:434169..434207TCONS_00062689-exon-scaffold_371-1491911889:434169..434207Clytia hemisphaericaexon
TCONS_00062689-exon-scaffold_371-1510915933:434169..434207TCONS_00062689-exon-scaffold_371-1510915933:434169..434207Clytia hemisphaericaexon
TCONS_00062689-exon-scaffold_371-1575043694:434169..434207TCONS_00062689-exon-scaffold_371-1575043694:434169..434207Clytia hemisphaericaexon
TCONS_00062689-exon-scaffold_371-1491911889:435588..435680TCONS_00062689-exon-scaffold_371-1491911889:435588..435680Clytia hemisphaericaexon
TCONS_00062689-exon-scaffold_371-1510915933:435588..435680TCONS_00062689-exon-scaffold_371-1510915933:435588..435680Clytia hemisphaericaexon
TCONS_00062689-exon-scaffold_371-1575043694:435588..435680TCONS_00062689-exon-scaffold_371-1575043694:435588..435680Clytia hemisphaericaexon
TCONS_00062689-exon-scaffold_371-1491911889:435988..436029TCONS_00062689-exon-scaffold_371-1491911889:435988..436029Clytia hemisphaericaexon
TCONS_00062689-exon-scaffold_371-1510915933:435988..436029TCONS_00062689-exon-scaffold_371-1510915933:435988..436029Clytia hemisphaericaexon
TCONS_00062689-exon-scaffold_371-1575043694:435988..436029TCONS_00062689-exon-scaffold_371-1575043694:435988..436029Clytia hemisphaericaexon
TCONS_00062689-exon-scaffold_371-1491911889:436311..436422TCONS_00062689-exon-scaffold_371-1491911889:436311..436422Clytia hemisphaericaexon
TCONS_00062689-exon-scaffold_371-1510915933:436311..436422TCONS_00062689-exon-scaffold_371-1510915933:436311..436422Clytia hemisphaericaexon
TCONS_00062689-exon-scaffold_371-1575043694:436311..436422TCONS_00062689-exon-scaffold_371-1575043694:436311..436422Clytia hemisphaericaexon
TCONS_00062689-exon-scaffold_371-1491911889:436768..436905TCONS_00062689-exon-scaffold_371-1491911889:436768..436905Clytia hemisphaericaexon
TCONS_00062689-exon-scaffold_371-1510915933:436768..436905TCONS_00062689-exon-scaffold_371-1510915933:436768..436905Clytia hemisphaericaexon
TCONS_00062689-exon-scaffold_371-1575043694:436768..436905TCONS_00062689-exon-scaffold_371-1575043694:436768..436905Clytia hemisphaericaexon
TCONS_00062689-exon-scaffold_371-1491911889:437356..437435TCONS_00062689-exon-scaffold_371-1491911889:437356..437435Clytia hemisphaericaexon
TCONS_00062689-exon-scaffold_371-1510915933:437356..437435TCONS_00062689-exon-scaffold_371-1510915933:437356..437435Clytia hemisphaericaexon
TCONS_00062689-exon-scaffold_371-1575043694:437356..437435TCONS_00062689-exon-scaffold_371-1575043694:437356..437435Clytia hemisphaericaexon
TCONS_00062689-exon-scaffold_371-1491911889:438379..438483TCONS_00062689-exon-scaffold_371-1491911889:438379..438483Clytia hemisphaericaexon
TCONS_00062689-exon-scaffold_371-1510915933:438379..438483TCONS_00062689-exon-scaffold_371-1510915933:438379..438483Clytia hemisphaericaexon
TCONS_00062689-exon-scaffold_371-1575043694:438379..438483TCONS_00062689-exon-scaffold_371-1575043694:438379..438483Clytia hemisphaericaexon
TCONS_00062689-exon-scaffold_371-1491911889:438818..438873TCONS_00062689-exon-scaffold_371-1491911889:438818..438873Clytia hemisphaericaexon
TCONS_00062689-exon-scaffold_371-1510915933:438818..438873TCONS_00062689-exon-scaffold_371-1510915933:438818..438873Clytia hemisphaericaexon
TCONS_00062689-exon-scaffold_371-1575043694:438818..438873TCONS_00062689-exon-scaffold_371-1575043694:438818..438873Clytia hemisphaericaexon
TCONS_00062689-exon-scaffold_371-1491911889:439672..439855TCONS_00062689-exon-scaffold_371-1491911889:439672..439855Clytia hemisphaericaexon
TCONS_00062689-exon-scaffold_371-1510915933:439672..439855TCONS_00062689-exon-scaffold_371-1510915933:439672..439855Clytia hemisphaericaexon
TCONS_00062689-exon-scaffold_371-1575043694:439672..439855TCONS_00062689-exon-scaffold_371-1575043694:439672..439855Clytia hemisphaericaexon
TCONS_00062689-exon-scaffold_371-1491911889:440452..442512TCONS_00062689-exon-scaffold_371-1491911889:440452..442512Clytia hemisphaericaexon
TCONS_00062689-exon-scaffold_371-1510915933:440452..442512TCONS_00062689-exon-scaffold_371-1510915933:440452..442512Clytia hemisphaericaexon
TCONS_00062689-exon-scaffold_371-1575043694:440452..442512TCONS_00062689-exon-scaffold_371-1575043694:440452..442512Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_371supercontigscaffold_371:429494..442512 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
7.21067	4.3268	0.669741	0.33272	0.0211057	0.0582793	5.78763e-07	6.35208e-06	0	7.38834e-05	9.63878e-06	0	0	0	0	2.6831e-07	1.52425	2.85529	0	0	32.8236	30.3406	28.3731	24.6235	71.7613	100.647	36.3103	26.0617	0.688315	1.59913
Blast
[Close]
BLAST of TCONS_00062689 vs. Swiss-Prot (Human)
Match: ASTL (Astacin-like metalloendopeptidase OS=Homo sapiens GN=ASTL PE=1 SV=4)

HSP 1 Score: 110.153 bits (274), Expect = 3.321e-25
Identity = 73/229 (31.88%), Postives = 114/229 (49.78%), Query Frame = 1 
Query:  496 KNDIIESENRKRNSVKINLWNPTQPGEKLVIPYSFRSDY--PNRLRPYVEKAIKSMNQHLRCGYDVWVPYSNQAHRVEFIKDGGCYSLLGKDTSEGNKQPISIDDGC--EAKHIVLHEMMHAMGFYHEQNRFDRDQFIKINWNNIQDGMASQFDKASNNNIFQTSVPYDYMSVMHYSLSSFSKNGQNTMTILKNAQSAKLTAQDLRILGDVPDLSAEDLQEVRAYFNCN 1170
            + DII     +  S   N W P      + +P+   S Y  P+R     +  ++++ +  R     +V Y +Q   +  I   GC+S +G+    G  Q +S+   C  + + IVLHE+MH +GF+HE  R DRD++I++NWN I  G    F K+ ++N+     PYDY SVMHY   +FS+ G  T+T         L A  + I G   +LSA D+  V   + C+
Sbjct:   75 EGDIIRPSPFRLLSATSNKW-PMGGSGVVEVPFLLSSKYDEPSR-----QVILEALAEFERSTCIRFVTYQDQRDFISIIPMYGCFSSVGRS---GGMQVVSLAPTCLQKGRGIVLHELMHVLGFWHEHTRADRDRYIRVNWNEILPGFEINFIKSQSSNML---TPYDYSSVMHYGRLAFSRRGLPTIT--------PLWAPSVHI-GQRWNLSASDITRVLKLYGCS 282
The following BLAST results are available for this feature:
BLAST of TCONS_00062689 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ASTL3.321e-2531.88Astacin-like metalloendopeptidase OS=Homo sapiens ... [more]
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