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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00062655 ID=TCONS_00062655|Name=TCONS_00062655|organism=Clytia hemisphaerica|type=transcript|length=1262bp
TTCTTCATCTGTTATAGCATCTGCTACCGCGTGTTTCTTTCGAAAAAACG
GCAGTCCTGTGATTTATGGTTGGTGTATAGTTTAGATCTGTCGAAAAATG
GATAAAACGATAGATATTTGCAAATCATACGTTATTAATCATTCTTAATA
TAGTCTAGAAAAATGTCATGCGACGCAATCTTAAGCACGTCAAACTATGG
TTTTAATGTGGCAGCTACCATCCTATTTGGTTTGTCAGCAATTATTACAA
CCTTGGGAAACACTTTCTCTTTGATGGTTCTTTGGCAGCCGTCACAACga
tcaaaatcaaacaaaattctAACATCGTTAGTAAGTACTGATTGTTTGGT
TGGTTTGTTATCAAATCCCATGGCCATATTGATGATGTGGACTGGTCTGG
AAATTACACCCTCAATTTGTAGAACAAACACTATTGCACTTTTCTTTGTT
ACCTGGTTTAGTTCTTCATCAGGCTTTACAATACCTTTTATTACCTACGA
TCGCTATATAAGCAtcacaaaacctttcaaatACCATGACATTATCACTG
ATCTTAAAATCAATCTAGTTCTTGTGACGATTTGGGTTGGTAACTCAGTA
ACGGCACTTTTAAATGCattcaacaaaacatttttactgTATTTTATTAA
CATTGGTTCTGTCATCGCATCTACCATCTTAATCACTGGATATTATCAGA
TCTGGAAAGCCGTCAAGCAACGGCAAACAAACATCCTATCGCTTAGTAGG
AACGACCAAGAACATCTACGGACCCATATCCGACTCTCTAAGAAAATCTT
ATTACTTATGATCGCGTATTTTGGTGCTGCCCTCCCAGTAGTTGTTTATG
CAATCGTTGTGTTgttttttgatcattttacACGCCCTTATCAACCGTAC
TTGTACGTTGTTGggattttcgtttttctttttaactctTGTGTGAACCC
TTGCATTTACATTTGGAAAGATCTTGAATTCAAACGAGCGTATAAAAGAT
TTCTTCGTAGGAACACAATCTTTGCTTGGCTTTTCAACGGTGATACGGTC
AATCCAATAGCAGTAATTTCTTGATAAATCAACTTTACTCAAATGATTTG
ACATGATTCAAACTGCATTCTTCCCTACAGTATTCACGTGGAAAGCCTAC
TAAGGGATGACTTTCGCATTTCCTTAGATGGATTTCACGGGCTCTATGGT
CCTTATATTTAAGCGTATATTTAAACTGTGAATTTCATTTTATCTAACGA
AAACATAGAAAG Run BLAST on NCBI protein sequence of TCONS_00062655-protein >TCONS_00062655-protein ID=TCONS_00062655-protein|Name=TCONS_00062655-protein|organism=Clytia hemisphaerica|type=polypeptide|length=303bp
MSCDAILSTSNYGFNVAATILFGLSAIITTLGNTFSLMVLWQPSQRSKSN
KILTSLVSTDCLVGLLSNPMAILMMWTGLEITPSICRTNTIALFFVTWFS
SSSGFTIPFITYDRYISITKPFKYHDIITDLKINLVLVTIWVGNSVTALL
NAFNKTFLLYFINIGSVIASTILITGYYQIWKAVKQRQTNILSLSRNDQE
HLRTHIRLSKKILLLMIAYFGAALPVVVYAIVVLFFDHFTRPYQPYLYVV
GIFVFLFNSCVNPCIYIWKDLEFKRAYKRFLRRNTIFAWLFNGDTVNPIA
VIS Run BLAST on NCBI transcript from alignment at scaffold_370:119507..120768 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00062655 ID=TCONS_00062655|Name=TCONS_00062655|organism=Clytia hemisphaerica|type=transcript|length=1262bp|location=Sequence derived from alignment at scaffold_370:119507..120768 (Clytia hemisphaerica)
CTTTCTATGTTTTCGTTAGATAAAATGAAATTCACAGTTTAAATATACGC
TTAAATATAAGGACCATAGAGCCCGTGAAATCCATCTAAGGAAATGCGAA
AGTCATCCCTTAGTAGGCTTTCCACGTGAATACTGTAGGGAAGAATGCAG
TTTGAATCATGTCAAATCATTTGAGTAAAGTTGATTTATCAAGAAATTAC
TGCTATTGGATTGACCGTATCACCGTTGAAAAGCCAAGCAAAGATTGTGT
TCCTACGAAGAAATCTTTTATACGCTCGTTTGAATTCAAGATCTTTCCAA
ATGTAAATGCAAGGGTTCACACAagagttaaaaagaaaaacgaaaatccC
AACAACGTACAAGTACGGTTGATAAGGGCGTgtaaaatgatcaaaaaacA
ACACAACGATTGCATAAACAACTACTGGGAGGGCAGCACCAAAATACGCG
ATCATAAGTAATAAGATTTTCTTAGAGAGTCGGATATGGGTCCGTAGATG
TTCTTGGTCGTTCCTACTAAGCGATAGGATGTTTGTTTGCCGTTGCTTGA
CGGCTTTCCAGATCTGATAATATCCAGTGATTAAGATGGTAGATGCGATG
ACAGAACCAATGTTAATAAAATAcagtaaaaatgttttgttgaatGCATT
TAAAAGTGCCGTTACTGAGTTACCAACCCAAATCGTCACAAGAACTAGAT
TGATTTTAAGATCAGTGATAATGTCATGGTatttgaaaggttttgtgaTG
CTTATATAGCGATCGTAGGTAATAAAAGGTATTGTAAAGCCTGATGAAGA
ACTAAACCAGGTAACAAAGAAAAGTGCAATAGTGTTTGTTCTACAAATTG
AGGGTGTAATTTCCAGACCAGTCCACATCATCAATATGGCCATGGGATTT
GATAACAAACCAACCAAACAATCAGTACTTACTAACGATGTTagaatttt
gtttgattttgatcGTTGTGACGGCTGCCAAAGAACCATCAAAGAGAAAG
TGTTTCCCAAGGTTGTAATAATTGCTGACAAACCAAATAGGATGGTAGCT
GCCACATTAAAACCATAGTTTGACGTGCTTAAGATTGCGTCGCATGACAT
TTTTCTAGACTATATTAAGAATGATTAATAACGTATGATTTGCAAATATC
TATCGTTTTATCCATTTTTCGACAGATCTAAACTATACACCAACCATAAA
TCACAGGACTGCCGTTTTTTCGAAAGAAACACGCGGTAGCAGATGCTATA
ACAGATGAAGAA Coding sequence (CDS) from alignment at scaffold_370:119507..120768 >TCONS_00062655 ID=TCONS_00062655|Name=TCONS_00062655|organism=Clytia hemisphaerica|type=CDS|length=912bp|location=Sequence derived from alignment at scaffold_370:119507..120768 (Clytia hemisphaerica)
TCAAGAAATTACTGCTATTGGATTGACCGTATCACCGTTGAAAAGCCAAG
CAAAGATTGTGTTCCTACGAAGAAATCTTTTATACGCTCGTTTGAATTCA
AGATCTTTCCAAATGTAAATGCAAGGGTTCACACAagagttaaaaagaaa
aacgaaaatccCAACAACGTACAAGTACGGTTGATAAGGGCGTgtaaaat
gatcaaaaaacAACACAACGATTGCATAAACAACTACTGGGAGGGCAGCA
CCAAAATACGCGATCATAAGTAATAAGATTTTCTTAGAGAGTCGGATATG
GGTCCGTAGATGTTCTTGGTCGTTCCTACTAAGCGATAGGATGTTTGTTT
GCCGTTGCTTGACGGCTTTCCAGATCTGATAATATCCAGTGATTAAGATG
GTAGATGCGATGACAGAACCAATGTTAATAAAATAcagtaaaaatgtttt
gttgaatGCATTTAAAAGTGCCGTTACTGAGTTACCAACCCAAATCGTCA
CAAGAACTAGATTGATTTTAAGATCAGTGATAATGTCATGGTatttgaaa
ggttttgtgaTGCTTATATAGCGATCGTAGGTAATAAAAGGTATTGTAAA
GCCTGATGAAGAACTAAACCAGGTAACAAAGAAAAGTGCAATAGTGTTTG
TTCTACAAATTGAGGGTGTAATTTCCAGACCAGTCCACATCATCAATATG
GCCATGGGATTTGATAACAAACCAACCAAACAATCAGTACTTACTAACGA
TGTTagaattttgtttgattttgatcGTTGTGACGGCTGCCAAAGAACCA
TCAAAGAGAAAGTGTTTCCCAAGGTTGTAATAATTGCTGACAAACCAAAT
AGGATGGTAGCTGCCACATTAAAACCATAGTTTGACGTGCTTAAGATTGC
GTCGCATGACAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00062655-exon-scaffold_370-1491911889:119507..120768 | TCONS_00062655-exon-scaffold_370-1491911889:119507..120768 | Clytia hemisphaerica | exon |
| TCONS_00062655-exon-scaffold_370-1510915933:119507..120768 | TCONS_00062655-exon-scaffold_370-1510915933:119507..120768 | Clytia hemisphaerica | exon |
| TCONS_00062655-exon-scaffold_370-1575043694:119507..120768 | TCONS_00062655-exon-scaffold_370-1575043694:119507..120768 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_370 | supercontig | scaffold_370:119507..120768 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007186 | G-protein coupled receptor signaling pathway |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004930 | G-protein coupled receptor activity |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0007186 |
G-protein coupled receptor signaling pathway |
| cellular_component |
GO:0016021 |
integral component of membrane |
| molecular_function |
GO:0004930 |
G-protein coupled receptor activity |
Blast
The following BLAST results are available for this feature:
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