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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00062621 ID=TCONS_00062621|Name=TCONS_00062621|organism=Clytia hemisphaerica|type=transcript|length=910bp
GAATATACAATATAGGATATATTATTGGCACAATTTTACCCACAATTGTT
TTTAATTATATTATAGTAAAGAGTCAAAGTGACAGCGCAGTAGACAGCCG
GCTTAAGCAAGAAAATCGACCAACTCTCCAGTGATTTACAATTTATCATT
TTGGCAATGCCTTTATGAAAAATATACCAATATTCACAAAGTTTCTGCAG
AAGCTACATTAAAGTATGCTTGATTGAGTCTTAGTAAAGGTTTTTTCTGA
ATGAATATGTGTCTATACTCCATTTTATAAAAACCACAGTAGTCGGGCGG
GCACCGGTCAAGCACAAAACAAGGGAAATGGTAAACGGCTAATACCTGCA
ACGGGCCATAACCTTATGAAAAATGAGTCAATTTCTCCCAAATTTCTGCA
TAAGCTGTACTGAAGTAAGCATGATAACTCTAGCCATACTCCACGGTACC
AATTCATTCCTTTAGGCCATAACTTTATGAAAATTTAGTCAATATTTTCC
AAATTTCTACAGGAACTGTATTGAAGTATACTGAACCTAATTCTAATAAA
GGTTTCTTCTAAATAAATCTGTATCCATGATGTAAAATAAAGGTGACGGC
CGTCAAAAGCACGGTTAGGATTGTTGAAGTCCAGTTTGGCCTAATACttc
atgaaaaattgatcaaTGTTTCTCAAATTTATACAGGAGCTGTACTGAAG
TATGCTGAGTCAAATTCCAAAAGAAGTTTCTTCTACATAAGTCTGTGTCA
GAAATGtaaaatcaaagtaaaataGCTGGTACAATCATGAACATTGGCCG
TCTCCAGCGGTGCATCATAACTCCTTCAAAAATGGAGCAATCTGTCTCAA
ATTTCTACAGGAGCTGTAATGAAGTATGCTCAATCGAAATCCAGTTAGGT
TTTCTTCTGA Run BLAST on NCBI transcript from alignment at scaffold_370:122367..123350+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00062621 ID=TCONS_00062621|Name=TCONS_00062621|organism=Clytia hemisphaerica|type=transcript|length=984bp|location=Sequence derived from alignment at scaffold_370:122367..123350+ (Clytia hemisphaerica)
GAATATACAATATAGGATATATTATTGGCACAATTTTACCCACAATTGTT
TTTAATTATATTATAGTAAAGAGTCAAAGTGACAGCGCAGTAGACAGCCG
GCTTAAGCAAGAAAATCGACCAACTCTCCAGTGATTTACAATTTATCATT
TTGGCAATGCCTTTATGAAAAATATACCAATATTCACAAAGTTTCTGCAG
AAGCTACATTAAAGTATGCTTGATTGAGTCTTAGTAAAGGTTTTTTCTGA
ATGAATATGTGTCTATACTCCATTTTATAAAAACCACAGTAGTCGGGCGG
GCACCGGTCAAGCACAAAACAAGGGAAATGGTAAACGGCTAATACCTGCA
ACGGGCCATAACCTTATGAAAAATGAGTCAATTTCTCCCAAATTTCTGCA
TAAGCTGTACTGAAGTATAAGCTTAATAAAGTTTCAGTAAAGGTTTCTTC
CTACTTGTACATTATTCAAAATGACAATGTCCGTCGGAACAAGCATGATA
ACTCTAGCCATACTCCACGGTACCAATTCATTCCTTTAGGCCATAACTTT
ATGAAAATTTAGTCAATATTTTCCAAATTTCTACAGGAACTGTATTGAAG
TATACTGAACCTAATTCTAATAAAGGTTTCTTCTAAATAAATCTGTATCC
ATGATGTAAAATAAAGGTGACGGCCGTCAAAAGCACGGTTAGGATTGTTG
AAGTCCAGTTTGGCCTAATACttcatgaaaaattgatcaaTGTTTCTCAA
ATTTATACAGGAGCTGTACTGAAGTATGCTGAGTCAAATTCCAAAAGAAG
TTTCTTCTACATAAGTCTGTGTCAGAAATGtaaaatcaaagtaaaataGC
TGGTACAATCATGAACATTGGCCGTCTCCAGCGGTGCATCATAACTCCTT
CAAAAATGGAGCAATCTGTCTCAAATTTCTACAGGAGCTGTAATGAAGTA
TGCTCAATCGAAATCCAGTTAGGTTTTCTTCTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00062621-exon-scaffold_370-1491911889:122367..122782 | TCONS_00062621-exon-scaffold_370-1491911889:122367..122782 | Clytia hemisphaerica | exon |
| TCONS_00062621-exon-scaffold_370-1510915933:122367..122782 | TCONS_00062621-exon-scaffold_370-1510915933:122367..122782 | Clytia hemisphaerica | exon |
| TCONS_00062621-exon-scaffold_370-1575043694:122367..122782 | TCONS_00062621-exon-scaffold_370-1575043694:122367..122782 | Clytia hemisphaerica | exon |
| TCONS_00062621-exon-scaffold_370-1491911889:122857..123350 | TCONS_00062621-exon-scaffold_370-1491911889:122857..123350 | Clytia hemisphaerica | exon |
| TCONS_00062621-exon-scaffold_370-1510915933:122857..123350 | TCONS_00062621-exon-scaffold_370-1510915933:122857..123350 | Clytia hemisphaerica | exon |
| TCONS_00062621-exon-scaffold_370-1575043694:122857..123350 | TCONS_00062621-exon-scaffold_370-1575043694:122857..123350 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_370 | supercontig | scaffold_370:122367..123350 + |
Blast
The following BLAST results are available for this feature:
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