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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00062610 ID=TCONS_00062610|Name=TCONS_00062610|organism=Clytia hemisphaerica|type=transcript|length=878bp
NTGCAAGAAAAATATAAGCGGGTCTTTCTTTTGGGTTTCGTTTGAGACAG
TGATCAGCAAGAACCGTAAGTCGAGTTTCCAAACAATCGTCGATATCAAA
ATTAATCTTTCTCTTTAGGATAAGCTTGAGTAATACACCGAATGAAAACA
TGTCAGAACCAAAACTGACTTTAGCACCTTTGAAAAGTTCTGGAGCAAAA
TGGTGTTGATCGTGGAATTTCTTCAATACATCTGCAATGTTGAACTTAGC
AGTGTCAACACGACAGGCAAACGTAAACCCAATAATGATGGGCTTGTAGC
CATCAAATATGATGTTGTCAGCAACCAAATGGTTGTGCAATACGcccttt
tcaaataaaaaattcagtccttCAATTATGCCATTGAGCAACCCTTTCAG
TTGCAGCAAAGAACTAATTGGTTTCACTATCTTTGACAGGGTCATGCCAG
ATTGAAATTGAAGAacatgtgaaaatttttttgaggagTGCACTAGCCCA
ATAGTATTTACTATGTTTGAATGTTTTCCAATAAAAGTTAATAGTCGGTG
CTCGTGGCTTAGAGTAGCCAGTTCTTGAGGCCCAAAGGCACCATCTAGGT
GGTATTTACACATCACAGTTTCACCATCCAACAAAGAGACTTTCTCTACT
GTTGAAAATGATCCCTGATGGATAGCAATTGGTTTAATCCCATGAAATTG
AGCAGGATCTAAAAGAACAGGTTCCTGATTTTGAAGGAGATAGTCGCCTG
TATGAAATGCATTTGTGAAGAGAGAAGCATCAACTAAAAATGTTGACCGT
TTCCGTCCAATTTGATCTAGAATTTTTAGCTTTGTAAAGTGAGCATTTCT
AAGGGTTAACGAAGCATTCTTTTCTTTC Run BLAST on NCBI protein sequence of TCONS_00062610-protein >TCONS_00062610-protein ID=TCONS_00062610-protein|Name=TCONS_00062610-protein|organism=Clytia hemisphaerica|type=polypeptide|length=292bp
KEKNASLTLRNAHFTKLKILDQIGRKRSTFLVDASLFTNAFHTGDYLLQN
QEPVLLDPAQFHGIKPIAIHQGSFSTVEKVSLLDGETVMCKYHLDGAFGP
QELATLSHEHRLLTFIGKHSNIVNTIGLVHSSKKFSHVLQFQSGMTLSKI
VKPISSLLQLKGLLNGIIEGLNFLFEKGVLHNHLVADNIIFDGYKPIIIG
FTFACRVDTAKFNIADVLKKFHDQHHFAPELFKGAKVSFGSDMFSFGVLL
KLILKRKINFDIDDCLETRLTVLADHCLKRNPKERPAYIFLA Run BLAST on NCBI transcript from alignment at scaffold_37:1..878 Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00062610 ID=TCONS_00062610|Name=TCONS_00062610|organism=Clytia hemisphaerica|type=transcript|length=878bp|location=Sequence derived from alignment at scaffold_37:1..878 (Clytia hemisphaerica)
GAAAGAAAAGAATGCTTCGTTAACCCTTAGAAATGCTCACTTTACAAAGC
TAAAAATTCTAGATCAAATTGGACGGAAACGGTCAACATTTTTAGTTGAT
GCTTCTCTCTTCACAAATGCATTTCATACAGGCGACTATCTCCTTCAAAA
TCAGGAACCTGTTCTTTTAGATCCTGCTCAATTTCATGGGATTAAACCAA
TTGCTATCCATCAGGGATCATTTTCAACAGTAGAGAAAGTCTCTTTGTTG
GATGGTGAAACTGTGATGTGTAAATACCACCTAGATGGTGCCTTTGGGCC
TCAAGAACTGGCTACTCTAAGCCACGAGCACCGACTATTAACTTTTATTG
GAAAACATTCAAACATAGTAAATACTATTGGGCTAGTGCActcctcaaaa
aaattttcacatgtTCTTCAATTTCAATCTGGCATGACCCTGTCAAAGAT
AGTGAAACCAATTAGTTCTTTGCTGCAACTGAAAGGGTTGCTCAATGGCA
TAATTGaaggactgaattttttatttgaaaagggCGTATTGCACAACCAT
TTGGTTGCTGACAACATCATATTTGATGGCTACAAGCCCATCATTATTGG
GTTTACGTTTGCCTGTCGTGTTGACACTGCTAAGTTCAACATTGCAGATG
TATTGAAGAAATTCCACGATCAACACCATTTTGCTCCAGAACTTTTCAAA
GGTGCTAAAGTCAGTTTTGGTTCTGACATGTTTTCATTCGGTGTATTACT
CAAGCTTATCCTAAAGAGAAAGATTAATTTTGATATCGACGATTGTTTGG
AAACTCGACTTACGGTTCTTGCTGATCACTGTCTCAAACGAAACCCAAAA
GAAAGACCCGCTTATATTTTTCTTGCAN Coding sequence (CDS) from alignment at scaffold_37:1..878 >TCONS_00062610 ID=TCONS_00062610|Name=TCONS_00062610|organism=Clytia hemisphaerica|type=CDS|length=876bp|location=Sequence derived from alignment at scaffold_37:1..878 (Clytia hemisphaerica)
AAAGAAAAGAATGCTTCGTTAACCCTTAGAAATGCTCACTTTACAAAGCT
AAAAATTCTAGATCAAATTGGACGGAAACGGTCAACATTTTTAGTTGATG
CTTCTCTCTTCACAAATGCATTTCATACAGGCGACTATCTCCTTCAAAAT
CAGGAACCTGTTCTTTTAGATCCTGCTCAATTTCATGGGATTAAACCAAT
TGCTATCCATCAGGGATCATTTTCAACAGTAGAGAAAGTCTCTTTGTTGG
ATGGTGAAACTGTGATGTGTAAATACCACCTAGATGGTGCCTTTGGGCCT
CAAGAACTGGCTACTCTAAGCCACGAGCACCGACTATTAACTTTTATTGG
AAAACATTCAAACATAGTAAATACTATTGGGCTAGTGCActcctcaaaaa
aattttcacatgtTCTTCAATTTCAATCTGGCATGACCCTGTCAAAGATA
GTGAAACCAATTAGTTCTTTGCTGCAACTGAAAGGGTTGCTCAATGGCAT
AATTGaaggactgaattttttatttgaaaagggCGTATTGCACAACCATT
TGGTTGCTGACAACATCATATTTGATGGCTACAAGCCCATCATTATTGGG
TTTACGTTTGCCTGTCGTGTTGACACTGCTAAGTTCAACATTGCAGATGT
ATTGAAGAAATTCCACGATCAACACCATTTTGCTCCAGAACTTTTCAAAG
GTGCTAAAGTCAGTTTTGGTTCTGACATGTTTTCATTCGGTGTATTACTC
AAGCTTATCCTAAAGAGAAAGATTAATTTTGATATCGACGATTGTTTGGA
AACTCGACTTACGGTTCTTGCTGATCACTGTCTCAAACGAAACCCAAAAG
AAAGACCCGCTTATATTTTTCTTGCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00062610-exon-scaffold_37-1491911889:1..878 | TCONS_00062610-exon-scaffold_37-1491911889:1..878 | Clytia hemisphaerica | exon |
| TCONS_00062610-exon-scaffold_37-1510915933:1..878 | TCONS_00062610-exon-scaffold_37-1510915933:1..878 | Clytia hemisphaerica | exon |
| TCONS_00062610-exon-scaffold_37-1575043694:1..878 | TCONS_00062610-exon-scaffold_37-1575043694:1..878 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_37 | supercontig | scaffold_37:1..878 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004672 | protein kinase activity |
| GO:0005524 | ATP binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006468 | protein phosphorylation |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0006468 |
protein phosphorylation |
| molecular_function |
GO:0005524 |
ATP binding |
| molecular_function |
GO:0004672 |
protein kinase activity |
Blast
The following BLAST results are available for this feature:
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