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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00062608 ID=TCONS_00062608|Name=TCONS_00062608|organism=Clytia hemisphaerica|type=transcript|length=1288bp GGGGGGGTAATGTGGTTCTTCGAAAAATTATCaacagataaaaaatgttt tgggtGTCTCATTAAAAAgagttttcaaagattttgtatGTAATCTTTTT GTTCCTCTTCAGTTACAGGGACTATTTGACTAAACTATCAAGGAGACTTG ACATGACGAATTAACAGCTCAAAAAGACAGTGACACAAACAAAGAcaatg acaaaaacaaaaacaaagacaataacaaaaagcaaaaacaaacacAACAG ACAATGACGCCTCTCACCTGCAGATTGGAAGCACTCCTATTACCTCAAAC TTAAAGATTTCTACAAAGAGTCTGCTTTAGTTCTAATGAGCGAAAAAGTA TGTGACGCTGCAATGCACCAACGTAAAGCTAAAAGACTCGAGCGAAGCTT AACATCGTTTGAAAAGGTTCATAAAATAGCTAAAAGATGGAAAACCACAG AGAGCCAATTTCGCAATCAACATCTGTCTTTTTTGCAAGAAAAGTCGAAC GAAACAGCATCCACACTGTACAGCAGGTGCTCCGAAAGACTAATGTTGCT AACTCTAAAGAAACGATATGCAGATGGTTCAGCTATAGCAACGAGGTTGA GCAAACAAATCAATAAAGTGTGcaaagaaataaagaatttaTTGGCTTCA TACAATTCCATGCGATCAGAGATTTCGCCTAAATTCAAACCTGTTGATTA TAAAGAGGCTCTAGATGTCAAGTCTTCAATATATAACGAAATAAATCTTG TATCCAACTTGGATGAGGCAAGAAGTTCACAAGTCCCTATCAACGTAGTG AAGTCACTCGTACAATTCTACCTCAGAAAACAAAGAGCACAAGAAGAAAT AATTATCGTCGAGGAAGAAATGAGATCGACATTGCACTTTTGGGAAAATC AATTGACTTTTCTTGATGAATGTGCTTCACACCAAACTTCTGTTGGGATT AGATACCTCTTAAGAGAAAGAATCTTGATTGTGAAGAACTTCCTTGGGga tttaaaaaaactctttGAGTTTGCTACCGAGCCAGTAGAACGAGTAGAAA TTAATCACACGAATAATCATATCTCCTTGAATGGCTCCGAAAATGAAGAG TACCTATTCAGTGATCAAGATTTTTCGAGCGATGAAGAAGCCATATCATC TGGTGACAGTGACAGCGACACTGGTGACTCTGTTTTAAGTGATGACTTGT ACATATAAATTATTTTGCCAATGATGTTTGCTATTTTTTACTGTTGTATA TAACTATCGTTAcaaagaaaagcattttttacCTGCGT Run BLAST on NCBI transcript from alignment at scaffold_37:52658..55463- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00062608 ID=TCONS_00062608|Name=TCONS_00062608|organism=Clytia hemisphaerica|type=transcript|length=2806bp|location=Sequence derived from alignment at scaffold_37:52658..55463- (Clytia hemisphaerica) GGGGGGGTAATGTGGTTCTTCGAAAAATTATCAACAGATAAAAAATGTTT
TGGGTGTCTCATTAAAAAGAGTTTTCAAAGATTTTGTATGTAATCTTTTT
GTTCCTCTTCAGTTACAGGGACTATTTGACTAAACTATCAAGGAGACTTG
ACATGACGAATTAACAGCTCAAAAAGACAGTGACACAAACAAAGACAATG
ACAAAAACAAAAACAAAGACAATAACAAAAAGCAAAAACAAACACAACAG
ACAATGACGCCTCTGTAATTTAGCTTATGGAATTTTCGTGGAAATTTGAT
TTTTGAGGGTTTGAGTATCGTCCGCGAATTAGGTCTTAAAGGAAATCTGG
GAAGACTGTTTTCCGCGAAGTAGAAAAATAAATCAGCAATGTCAAGTAAC
TATCAAAATCTTTACTAGCATCCAATCCGTAATTTAATGACTAAAATTCG
AAATCCGCGAAAGTCCTTGTGAAAGTTTATCCCATTTAAAAGGTTGACTT
AGTTTTATTAGTTCTGTTAGTTTCTGAAAAAACATGTCGGACCTGGTTAA
TGAAAAAGGATGCACTGCACTGTGTTTCCATCATTCTTACTTAAACGGAA
ACATGAAAACTACTCTTCAATTCTTATTCATTCAATTTCCGTTTTCTTCA
GCACCTGCAGATTGGAAGCACTCCTATTACCTCAAACTTAAAGATTTCTA
CAAAGAGTCTGCTTTAGTTCTAATGAGCGAAAAAGTATGTGACGCTGCAA
TGCACCAACGTAAAGCTAAAAGGTAAATGGTTAAGACAAATCATAATAAA
ATGTATTCTTTCATTTTATTTATCATTGAAAATTTTTTTAATCCTTCAAA
ATCTTTCACATACTGTGGAACTGTATATTATAGAAGCAAATTATGTCTTC
TTTCTGACCCTGATGCTTTTAAAGAAAGTTTTTGATCTCTAACGTAAAAT
GTTGCACTTCTACTTTTCAGACTCGAGCGAAGCTTAACATCGTTTGAAAA
GGTTCATAAAATAGCTAAAAGATGGAAAACCACAGAGAGCCAATTTCGCA
ATCAACATCTGTCTTTTTTGCAAGAAAAGTCGAACGAAACAGCATCCACA
CTGTACAGCAGGTGCTCCGAAAGACTAATGTTGCTAACTCTAAAGAAACG
ATATGCAGGTAAGTGTTTTTAGTGACACCTATTAACATTCTATTCAAAAA
TCTCGAGTTACCATAGAAAATTACAAATTAGGCGCGTTGATACTTTAAAC
GTTGTAGTGTATGAGGAACTTTCAATTCAAATGATAAAGTGAAGTGTGAT
GTGTCGATTTGGTTGTAATGAAGTGCAATAAAAATCCGTTTTTCTACTTT
TAGATGGTTCAGCTATAGCAACGAGGTTGAGCAAACAAATCAATAAAGTG
TGCAAAGAAATAAAGAATTTATTGGCTTCATACAATTCCATGCGATCAGA
GATTTCGCCTAAATTCAAACCTGTTGATTATAAAGAGGCTCTAGATGTCA
AGTCTTCAATATATAACGAAATAAATCTTGTATCCAACTTGGATGAGGTA
AGTGTAAAAGTGTGTAAAAAAGGTCATAAGTAGAGGAGCAAAAAGAGAAA
TCTATTAGTTTGAGCTAAGCCCGGGGGGGCACTTAAGGTAAATGACTTAC
CAGACGTTCGGCCCTTAAGGGTCGGTTTTTCATAGTTCAGTTAGTGCACT
GTAAGGGTAGGAAATTACAAAACTTCACTGAACTGCACTGTAAGGGTAGG
AAATTGTAATAAAAGGCCAATTTTTTGGTAAAATTGGCAAAAAAATTGGG
CAATTATGGAGTAAAATTGGTCAATTTTGGAGGAAAATTTCCACATTTTC
TTGGAAATTGCAAAAATTTCGCCCTTACGGGCAAGAAACTTTGAAAAAGT
GCACTGTAAGGGTACGATTTTTCATGGAAATTCACTGCACTGTAAGGGTC
CGATTTTGGAAGCCAAATTTTGGGCCGAACGTATGGTCGTTTTCAGATCG
AGTGCCCCCCCCCCCGGGGAGCTAAGAGATTGGGTGAAACTTTCGAAGTA
TTTCGAGGGTCAATCGGTGCAAGTTTAGTGTGTGTAAAGAACCATCCATT
GATGGTACTAAGTCTTTAAGTTCCAACCGGGTCTTCCTATAAACTTTCGA
CCACATTTCGATATTGTCAAATTTTCTTCAAGGACGTTTTATGGATGAAG
TCTACTATCGCAAAAAAGTGTCCTTCATAATGGTTTGGTCTCAAATTTGA
ATCCTTACAGTTTCTTCTCTCCTCTTTCATTTTAGGCAAGAAGTTCACAA
GTCCCTATCAACGTAGTGAAGTCACTCGTACAATTCTACCTCAGAAAACA
AAGAGCACAAGAAGAAATAATTATCGTCGAGGAAGAAATGAGATCGACAT
TGCACTTTTGGGAAAATCAATTGACTTTTCTTGATGAATGTGCTTCACAC
CAAACTTCTGTTGGGATTAGATACCTCTTAAGAGAAAGAATCTTGATTGT
GAAGAACTTCCTTGGGGATTTAAAAAAACTCTTTGAGTTTGCTACCGAGC
CAGTAGAACGAGTAGAAATTAATCACACGAATAATCATATCTCCTTGAAT
GGCTCCGAAAATGAAGAGTACCTATTCAGTGATCAAGATTTTTCGAGCGA
TGAAGAAGCCATATCATCTGGTGACAGTGACAGCGACACTGGTGACTCTG
TTTTAAGTGATGACTTGTACATATAAATTATTTTGCCAATGATGTTTGCT
ATTTTTTACTGTTGTATATAACTATCGTTACAAAGAAAAGCATTTTTTAC
CTGCGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00062608-exon-scaffold_37-1575043694:55200..55463 | TCONS_00062608-exon-scaffold_37-1575043694:55200..55463 | Clytia hemisphaerica | exon |
TCONS_00062608-exon-scaffold_37-1575043694:54692..54812 | TCONS_00062608-exon-scaffold_37-1575043694:54692..54812 | Clytia hemisphaerica | exon |
TCONS_00062608-exon-scaffold_37-1575043694:54306..54493 | TCONS_00062608-exon-scaffold_37-1575043694:54306..54493 | Clytia hemisphaerica | exon |
TCONS_00062608-exon-scaffold_37-1575043694:53917..54110 | TCONS_00062608-exon-scaffold_37-1575043694:53917..54110 | Clytia hemisphaerica | exon |
TCONS_00062608-exon-scaffold_37-1575043694:52658..53178 | TCONS_00062608-exon-scaffold_37-1575043694:52658..53178 | Clytia hemisphaerica | exon |
TCONS_00062608-exon-scaffold_37-1510915933:55200..55463 | TCONS_00062608-exon-scaffold_37-1510915933:55200..55463 | Clytia hemisphaerica | exon |
TCONS_00062608-exon-scaffold_37-1510915933:54692..54812 | TCONS_00062608-exon-scaffold_37-1510915933:54692..54812 | Clytia hemisphaerica | exon |
TCONS_00062608-exon-scaffold_37-1510915933:54306..54493 | TCONS_00062608-exon-scaffold_37-1510915933:54306..54493 | Clytia hemisphaerica | exon |
TCONS_00062608-exon-scaffold_37-1510915933:53917..54110 | TCONS_00062608-exon-scaffold_37-1510915933:53917..54110 | Clytia hemisphaerica | exon |
TCONS_00062608-exon-scaffold_37-1510915933:52658..53178 | TCONS_00062608-exon-scaffold_37-1510915933:52658..53178 | Clytia hemisphaerica | exon |
TCONS_00062608-exon-scaffold_37-1491911889:55200..55463 | TCONS_00062608-exon-scaffold_37-1491911889:55200..55463 | Clytia hemisphaerica | exon |
TCONS_00062608-exon-scaffold_37-1491911889:54692..54812 | TCONS_00062608-exon-scaffold_37-1491911889:54692..54812 | Clytia hemisphaerica | exon |
TCONS_00062608-exon-scaffold_37-1491911889:54306..54493 | TCONS_00062608-exon-scaffold_37-1491911889:54306..54493 | Clytia hemisphaerica | exon |
TCONS_00062608-exon-scaffold_37-1491911889:53917..54110 | TCONS_00062608-exon-scaffold_37-1491911889:53917..54110 | Clytia hemisphaerica | exon |
TCONS_00062608-exon-scaffold_37-1491911889:52658..53178 | TCONS_00062608-exon-scaffold_37-1491911889:52658..53178 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_37 | supercontig | scaffold_37:52658..55463 - |
Blast
The following BLAST results are available for this feature:
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