TCONS_00062595 (transcript) - C. hemisphaerica

Overview
NameTCONS_00062595
Unique NameTCONS_00062595
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length124

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00062595 ID=TCONS_00062595|Name=TCONS_00062595|organism=Clytia hemisphaerica|type=transcript|length=124bp
ATATTTATGATGGAAGAACTCAATTTCTTTGATCTGTTGacacttttcaa
gaaaaactctCATAACAAATTCAATGTAAAGATTAAAAAGATTTGGGCTT
TCCGGTCCTCCTTGTCGAACACCG
Run BLAST on NCBI

transcript from alignment at scaffold_369:439808..439931

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00062595 ID=TCONS_00062595|Name=TCONS_00062595|organism=Clytia hemisphaerica|type=transcript|length=124bp|location=Sequence derived from alignment at scaffold_369:439808..439931 (Clytia hemisphaerica)
CGGTGTTCGACAAGGAGGACCGGAAAGCCCAAATCTTTTTAATCTTTACA
TTGAATTTGTTATGagagtttttcttgaaaagtgtCAACAGATCAAAGAA
ATTGAGTTCTTCCATCATAAATAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_039224XLOC_039224Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00062595-exon-scaffold_369-1491911889:439808..439931TCONS_00062595-exon-scaffold_369-1491911889:439808..439931Clytia hemisphaericaexon
TCONS_00062595-exon-scaffold_369-1510915933:439808..439931TCONS_00062595-exon-scaffold_369-1510915933:439808..439931Clytia hemisphaericaexon
TCONS_00062595-exon-scaffold_369-1575043694:439808..439931TCONS_00062595-exon-scaffold_369-1575043694:439808..439931Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_369supercontigscaffold_369:439808..439931 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00062595 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top