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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00062587 ID=TCONS_00062587|Name=TCONS_00062587|organism=Clytia hemisphaerica|type=transcript|length=921bp
GGCAGACCATTGAAAGATATCAACGAAGACCAAGTCCTTGCACTAAAAAC
AATAGGGTTCAAATGGAAGGAAATTGCTGATCTTATTGGAGTCTCGGATA
AGACACTTAGAACGCGAAGAAAGGAAAGCATGTTGTTCTTTCCATCCAGC
AAGCATGGGGGCAGCATGGTCCCGCCGTCCCATNCAAAGCTTGATTTACT
AATCCGAGGGGTTTCCCCGAAAAAGAAGACCTTGAAGCGCAATTCGAGCA
AAATCGAATGCGCCGGGGTTTTCCCTCGtttccaaaacaaaaacaaaaac
aaaacaaaaaaaaattctaaaatcacCAAAACTCAAATAAAAATGGAGAA
TGTAAATGAGAAGAAACCAAAGTTCACAAGAAAACCGAACTTTTCAGCAG
ATGAAACACGATTCCTACTAGACTCATACGAAGAATTCAAAGATATCCtt
gaaggaaaattttcaaatgctCTTACACAACAAAACAAGAACGAATCATG
GCAAAAAATAGCCAGCAACGTTAATGCTGTTGGGGTAACGCCTCGTACGA
TTGCTAGTAtacaaaacaaatttaaaaacattaaatctGAAGCAAAACTG
GCCTATAATAAATTCAAGAAACATCAAAATGGCACTGGTGGTGGTCCTCC
ACCAAAAGAACCGTCTTCATCAGACCAGAGAATAATGAGTTTATTCGAAG
GGCGTCCCTCTTTTGAGGGCCTTCATGGTTTTGCAACAAACGCACATGAA
ACTGGTaagtttccttgtttttttttcaatacacTTGCTGATGATCTTTC
TGGTGTGATACTTATTATCCTTGATGTCTTTCTCTACTCCCTCCCACCGG
AAAACAAGAGACTAATGAAGCAATCAGCTAATTATAATTCTAAGATAATA
ATTtccaaattatttattttt Run BLAST on NCBI protein sequence of TCONS_00062587-protein >TCONS_00062587-protein ID=TCONS_00062587-protein|Name=TCONS_00062587-protein|organism=Clytia hemisphaerica|type=polypeptide|length=307bp
GRPLKDINEDQVLALKTIGFKWKEIADLIGVSDKTLRTRRKESMLFFPSS
KHGGSMVPPSHXKLDLLIRGVSPKKKTLKRNSSKIECAGVFPRFQNKNKN
KTKKNSKITKTQIKMENVNEKKPKFTRKPNFSADETRFLLDSYEEFKDIL
EGKFSNALTQQNKNESWQKIASNVNAVGVTPRTIASIQNKFKNIKSEAKL
AYNKFKKHQNGTGGGPPPKEPSSSDQRIMSLFEGRPSFEGLHGFATNAHE
TGKFPCFFFNTLADDLSGVILIILDVFLYSLPPENKRLMKQSANYNSKII
ISKLFIF Run BLAST on NCBI transcript from alignment at scaffold_369:362748..363668 Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00062587 ID=TCONS_00062587|Name=TCONS_00062587|organism=Clytia hemisphaerica|type=transcript|length=921bp|location=Sequence derived from alignment at scaffold_369:362748..363668 (Clytia hemisphaerica)
aaaaataaataatttggaAATTATTATCTTAGAATTATAATTAGCTGATT
GCTTCATTAGTCTCTTGTTTTCCGGTGGGAGGGAGTAGAGAAAGACATCA
AGGATAATAAGTATCACACCAGAAAGATCATCAGCAAgtgtattgaaaaa
aaaacaaggaaacttACCAGTTTCATGTGCGTTTGTTGCAAAACCATGAA
GGCCCTCAAAAGAGGGACGCCCTTCGAATAAACTCATTATTCTCTGGTCT
GATGAAGACGGTTCTTTTGGTGGAGGACCACCACCAGTGCCATTTTGATG
TTTCTTGAATTTATTATAGGCCAGTTTTGCTTCagatttaatgtttttaa
atttgttttgtaTACTAGCAATCGTACGAGGCGTTACCCCAACAGCATTA
ACGTTGCTGGCTATTTTTTGCCATGATTCGTTCTTGTTTTGTTGTGTAAG
agcatttgaaaattttccttcaaGGATATCTTTGAATTCTTCGTATGAGT
CTAGTAGGAATCGTGTTTCATCTGCTGAAAAGTTCGGTTTTCTTGTGAAC
TTTGGTTTCTTCTCATTTACATTCTCCATTTTTATTTGAGTTTTGgtgat
tttagaatttttttttgttttgtttttgtttttgttttggaaaCGAGGGA
AAACCCCGGCGCATTCGATTTTGCTCGAATTGCGCTTCAAGGTCTTCTTT
TTCGGGGAAACCCCTCGGATTAGTAAATCAAGCTTTGNATGGGACGGCGG
GACCATGCTGCCCCCATGCTTGCTGGATGGAAAGAACAACATGCTTTCCT
TTCTTCGCGTTCTAAGTGTCTTATCCGAGACTCCAATAAGATCAGCAATT
TCCTTCCATTTGAACCCTATTGTTTTTAGTGCAAGGACTTGGTCTTCGTT
GATATCTTTCAATGGTCTGCC Coding sequence (CDS) from alignment at scaffold_369:362748..363668 >TCONS_00062587 ID=TCONS_00062587|Name=TCONS_00062587|organism=Clytia hemisphaerica|type=CDS|length=921bp|location=Sequence derived from alignment at scaffold_369:362748..363668 (Clytia hemisphaerica)
aaaaataaataatttggaAATTATTATCTTAGAATTATAATTAGCTGATT
GCTTCATTAGTCTCTTGTTTTCCGGTGGGAGGGAGTAGAGAAAGACATCA
AGGATAATAAGTATCACACCAGAAAGATCATCAGCAAgtgtattgaaaaa
aaaacaaggaaacttACCAGTTTCATGTGCGTTTGTTGCAAAACCATGAA
GGCCCTCAAAAGAGGGACGCCCTTCGAATAAACTCATTATTCTCTGGTCT
GATGAAGACGGTTCTTTTGGTGGAGGACCACCACCAGTGCCATTTTGATG
TTTCTTGAATTTATTATAGGCCAGTTTTGCTTCagatttaatgtttttaa
atttgttttgtaTACTAGCAATCGTACGAGGCGTTACCCCAACAGCATTA
ACGTTGCTGGCTATTTTTTGCCATGATTCGTTCTTGTTTTGTTGTGTAAG
agcatttgaaaattttccttcaaGGATATCTTTGAATTCTTCGTATGAGT
CTAGTAGGAATCGTGTTTCATCTGCTGAAAAGTTCGGTTTTCTTGTGAAC
TTTGGTTTCTTCTCATTTACATTCTCCATTTTTATTTGAGTTTTGgtgat
tttagaatttttttttgttttgtttttgtttttgttttggaaaCGAGGGA
AAACCCCGGCGCATTCGATTTTGCTCGAATTGCGCTTCAAGGTCTTCTTT
TTCGGGGAAACCCCTCGGATTAGTAAATCAAGCTTTGNATGGGACGGCGG
GACCATGCTGCCCCCATGCTTGCTGGATGGAAAGAACAACATGCTTTCCT
TTCTTCGCGTTCTAAGTGTCTTATCCGAGACTCCAATAAGATCAGCAATT
TCCTTCCATTTGAACCCTATTGTTTTTAGTGCAAGGACTTGGTCTTCGTT
GATATCTTTCAATGGTCTGCC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00062587-exon-scaffold_369-1491911889:362748..363668 | TCONS_00062587-exon-scaffold_369-1491911889:362748..363668 | Clytia hemisphaerica | exon |
| TCONS_00062587-exon-scaffold_369-1510915933:362748..363668 | TCONS_00062587-exon-scaffold_369-1510915933:362748..363668 | Clytia hemisphaerica | exon |
| TCONS_00062587-exon-scaffold_369-1575043694:362748..363668 | TCONS_00062587-exon-scaffold_369-1575043694:362748..363668 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_369 | supercontig | scaffold_369:362748..363668 . |
Annotated Terms
The following terms have been associated with this transcript:
Blast
The following BLAST results are available for this feature:
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