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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00062471 ID=TCONS_00062471|Name=TCONS_00062471|organism=Clytia hemisphaerica|type=transcript|length=2209bp
TAAAGAGGAACTTGTTTATCAGATCTGTGATGGCACTGAAGAACCAATAG
CAGAATTATTCAAATCTGTGTCTTGGGAAGACATCAAAGCGACAGTAGAA
AAAGTTGTGGAAAAATGTCATTGGAAACAGCATATTAAATGGTTGGATAT
CGCTTCCAAAAGTGGAATAAATGAAATCGCTGATATAGTCATTTGTATTG
CGTTATATAATCTCGAAAATTCTGACGATATTCCAAAGCGAGGTTTATGG
GTCAAAATCTTCGTGCAAATATTCAATAATGATCGTCTATTTGAAAGTTG
GTTCGACTCTCTTTTAAAATGTGAAGATATTACAAAAGATATGGAACTAA
CTGGGAAACTGTGTGAATTTATCCCGTCTAGACACCATTCGCTCCCCTTT
CTAATGAAATGTTTTGTTGAGAATGTATATGAACAAGGATATTTGGGTCT
CACCGATAAAGACACCAAAGATTTTTGCAATACTGTTTTGATCCTTGTTA
ATAACTATGATCGATCCAAGCAGGAATTAACCGATTTGTGTGATTGTCTA
CTGGTTAATGATAACCATGAAGTTGTTGCAAAAATATTGGTCAATTTATG
CAAGAGATCAAGCAAAATATCTGATGCAGAAGCTTTTGAGATGATGTTTG
ATAAATATTTGAACGATGTGGATCCTAATGATATGTTTTATAACGAAATC
GAACATTGTgctgaaatatttttaagcACAAAGTTTTCAAATGATATTGA
ATGGACAAAAAGGTTTCTTGAAATCTGTAAAGGAGTCAACGATTTAGATT
TCCTTTGTTACAGTATTCAAGCAACAATAGATCTTCTATCAGTcaacaaa
aaatctgaaatatttttacaggtttttgtaaagatttttgaGGATTTCCT
TAACAAATTAAGTACGATAGACAACGACTACTTAAATGGGTTAATTTTTA
GCCTATTTAGAGCCGAGGGAGAGGTGTTATCGAATTTGTTGAAAGATTTG
TTATCGAATGAAATAGTCATGGAAGCACATGAAGTTATAGAAGTAACATT
GTCAGATCTTTGTTTAGAAGATAACCGCTATAAATTGAGAAAACTGAAAG
CCAACAAGAATTTTCAAACCCTCTTTTTGAATTACATGAAATTGCTACCC
GACTACATGGACATGGATAAATGCGAAAATGCAGTGGTGTTCTTAGTCAA
AAATGACGACTGGGAACATTCTATCGagcttttgaatttatttcttGATT
TAGAGATGATCAAAAATNTTACCCGACGACATGGACATGGATAAATGTGA
AAATGCAGTGGTGTTCTTAGTCAAAAATGATGACTGGGAACATTCTATCG
aacttttgaatttatttcttGATTTAGAGATGatcaaaaataactttcga
aATTGTTATCAATGTTTGTCTCAGATGAAACCACAAAACACTCAGAACTA
CAAATTACTGTTGAAGACTGTTAttcattctttgaaaatctttattGAAG
GAATATGTGATGTGAACAAAGAAATCTTTGATCCGACCTACCACAACATT
CTTAAAGTTGTCCGTATTATCTTTAAGAATGGATGCTTTTCAGATTTGAT
TCCAAGTGTTATCGCTGTCCTTAAGTATGGAATGGATCATATtatgtaca
aagaaaaaagtattttaCAAATGCTACTGcacaatttgaaaaatgaattt
ggAAGTAAAGACTTCTATGCAGACATGATGCTAATACGTGCTCTTAATTT
GATTGAATTACATAATAAAGTTGGTCCTCCAAAATTTACATGGAGACAAT
CAGGATCGATTCCTAGGCATAGTAGAGTTGTTCGATTTCTCCGGAAAGAT
GATGAAGAAATATATGTTTACAATCGATTCGAGAACATTAGTGAAGCCAG
AGAATGGATTGACAGGCATGCAGGTGTAAAGCTATCTGGTGGATACAGTT
TCACAGCAGTTGCTCGAACACATGCTGGAAATGTAGAAGTTATCATTCAA
AAAGGTCGTGAAATCTATCAGATGAAAAAGAATGAGTATTTTGAGAAAca
gaaagaaattgaaagattAAAAAGGAAGTTGAAACGATTTCCGACGAAAT
TTTCGAAATTATCAGACTTCAAGAGACCTCTGGTATCATCTGCAAATGAG
ACATAAAGTTTCTACAAAAACACACATAATTCAACCATATATTTTTTAGG
GCACTTATT Run BLAST on NCBI protein sequence of TCONS_00062471-protein >TCONS_00062471-protein ID=TCONS_00062471-protein|Name=TCONS_00062471-protein|organism=Clytia hemisphaerica|type=polypeptide|length=430bp
KEELVYQICDGTEEPIAELFKSVSWEDIKATVEKVVEKCHWKQHIKWLDI
ASKSGINEIADIVICIALYNLENSDDIPKRGLWVKIFVQIFNNDRLFESW
FDSLLKCEDITKDMELTGKLCEFIPSRHHSLPFLMKCFVENVYEQGYLGL
TDKDTKDFCNTVLILVNNYDRSKQELTDLCDCLLVNDNHEVVAKILVNLC
KRSSKISDAEAFEMMFDKYLNDVDPNDMFYNEIEHCAEIFLSTKFSNDIE
WTKRFLEICKGVNDLDFLCYSIQATIDLLSVNKKSEIFLQVFVKIFEDFL
NKLSTIDNDYLNGLIFSLFRAEGEVLSNLLKDLLSNEIVMEAHEVIEVTL
SDLCLEDNRYKLRKLKANKNFQTLFLNYMKLLPDYMDMDKCENAVVFLVK
NDDWEHSIELLNLFLDLEMIKNXTRRHGHG Run BLAST on NCBI transcript from alignment at scaffold_364:376018..378226 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00062471 ID=TCONS_00062471|Name=TCONS_00062471|organism=Clytia hemisphaerica|type=transcript|length=2209bp|location=Sequence derived from alignment at scaffold_364:376018..378226 (Clytia hemisphaerica)
AATAAGTGCCCTAAAAAATATATGGTTGAATTATGTGTGTTTTTGTAGAA
ACTTTATGTCTCATTTGCAGATGATACCAGAGGTCTCTTGAAGTCTGATA
ATTTCGAAAATTTCGTCGGAAATCGTTTCAACTTCCTTTTTaatctttca
atttctttctgTTTCTCAAAATACTCATTCTTTTTCATCTGATAGATTTC
ACGACCTTTTTGAATGATAACTTCTACATTTCCAGCATGTGTTCGAGCAA
CTGCTGTGAAACTGTATCCACCAGATAGCTTTACACCTGCATGCCTGTCA
ATCCATTCTCTGGCTTCACTAATGTTCTCGAATCGATTGTAAACATATAT
TTCTTCATCATCTTTCCGGAGAAATCGAACAACTCTACTATGCCTAGGAA
TCGATCCTGATTGTCTCCATGTAAATTTTGGAGGACCAACTTTATTATGT
AATTCAATCAAATTAAGAGCACGTATTAGCATCATGTCTGCATAGAAGTC
TTTACTTccaaattcatttttcaaattgtgCAGTAGCATTTGtaaaatac
ttttttctttgtacataATATGATCCATTCCATACTTAAGGACAGCGATA
ACACTTGGAATCAAATCTGAAAAGCATCCATTCTTAAAGATAATACGGAC
AACTTTAAGAATGTTGTGGTAGGTCGGATCAAAGATTTCTTTGTTCACAT
CACATATTCCTTCaataaagattttcaaagaatgaaTAACAGTCTTCAAC
AGTAATTTGTAGTTCTGAGTGTTTTGTGGTTTCATCTGAGACAAACATTG
ATAACAATttcgaaagttatttttgatCATCTCTAAATCaagaaataaat
tcaaaagttCGATAGAATGTTCCCAGTCATCATTTTTGACTAAGAACACC
ACTGCATTTTCACATTTATCCATGTCCATGTCGTCGGGTAANATTTTTGA
TCATCTCTAAATCaagaaataaattcaaaagctCGATAGAATGTTCCCAG
TCGTCATTTTTGACTAAGAACACCACTGCATTTTCGCATTTATCCATGTC
CATGTAGTCGGGTAGCAATTTCATGTAATTCAAAAAGAGGGTTTGAAAAT
TCTTGTTGGCTTTCAGTTTTCTCAATTTATAGCGGTTATCTTCTAAACAA
AGATCTGACAATGTTACTTCTATAACTTCATGTGCTTCCATGACTATTTC
ATTCGATAACAAATCTTTCAACAAATTCGATAACACCTCTCCCTCGGCTC
TAAATAGGCTAAAAATTAACCCATTTAAGTAGTCGTTGTCTATCGTACTT
AATTTGTTAAGGAAATCCtcaaaaatctttacaaaaacctgtaaaaatat
ttcagattttttgttgACTGATAGAAGATCTATTGTTGCTTGAATACTGT
AACAAAGGAAATCTAAATCGTTGACTCCTTTACAGATTTCAAGAAACCTT
TTTGTCCATTCAATATCATTTGAAAACTTTGTgcttaaaaatatttcagc
ACAATGTTCGATTTCGTTATAAAACATATCATTAGGATCCACATCGTTCA
AATATTTATCAAACATCATCTCAAAAGCTTCTGCATCAGATATTTTGCTT
GATCTCTTGCATAAATTGACCAATATTTTTGCAACAACTTCATGGTTATC
ATTAACCAGTAGACAATCACACAAATCGGTTAATTCCTGCTTGGATCGAT
CATAGTTATTAACAAGGATCAAAACAGTATTGCAAAAATCTTTGGTGTCT
TTATCGGTGAGACCCAAATATCCTTGTTCATATACATTCTCAACAAAACA
TTTCATTAGAAAGGGGAGCGAATGGTGTCTAGACGGGATAAATTCACACA
GTTTCCCAGTTAGTTCCATATCTTTTGTAATATCTTCACATTTTAAAAGA
GAGTCGAACCAACTTTCAAATAGACGATCATTATTGAATATTTGCACGAA
GATTTTGACCCATAAACCTCGCTTTGGAATATCGTCAGAATTTTCGAGAT
TATATAACGCAATACAAATGACTATATCAGCGATTTCATTTATTCCACTT
TTGGAAGCGATATCCAACCATTTAATATGCTGTTTCCAATGACATTTTTC
CACAACTTTTTCTACTGTCGCTTTGATGTCTTCCCAAGACACAGATTTGA
ATAATTCTGCTATTGGTTCTTCAGTGCCATCACAGATCTGATAAACAAGT
TCCTCTTTA Coding sequence (CDS) from alignment at scaffold_364:376018..378226 >TCONS_00062471 ID=TCONS_00062471|Name=TCONS_00062471|organism=Clytia hemisphaerica|type=CDS|length=1293bp|location=Sequence derived from alignment at scaffold_364:376018..378226 (Clytia hemisphaerica)
TTATCCATGTCCATGTCGTCGGGTAANATTTTTGATCATCTCTAAATCaa
gaaataaattcaaaagctCGATAGAATGTTCCCAGTCGTCATTTTTGACT
AAGAACACCACTGCATTTTCGCATTTATCCATGTCCATGTAGTCGGGTAG
CAATTTCATGTAATTCAAAAAGAGGGTTTGAAAATTCTTGTTGGCTTTCA
GTTTTCTCAATTTATAGCGGTTATCTTCTAAACAAAGATCTGACAATGTT
ACTTCTATAACTTCATGTGCTTCCATGACTATTTCATTCGATAACAAATC
TTTCAACAAATTCGATAACACCTCTCCCTCGGCTCTAAATAGGCTAAAAA
TTAACCCATTTAAGTAGTCGTTGTCTATCGTACTTAATTTGTTAAGGAAA
TCCtcaaaaatctttacaaaaacctgtaaaaatatttcagattttttgtt
gACTGATAGAAGATCTATTGTTGCTTGAATACTGTAACAAAGGAAATCTA
AATCGTTGACTCCTTTACAGATTTCAAGAAACCTTTTTGTCCATTCAATA
TCATTTGAAAACTTTGTgcttaaaaatatttcagcACAATGTTCGATTTC
GTTATAAAACATATCATTAGGATCCACATCGTTCAAATATTTATCAAACA
TCATCTCAAAAGCTTCTGCATCAGATATTTTGCTTGATCTCTTGCATAAA
TTGACCAATATTTTTGCAACAACTTCATGGTTATCATTAACCAGTAGACA
ATCACACAAATCGGTTAATTCCTGCTTGGATCGATCATAGTTATTAACAA
GGATCAAAACAGTATTGCAAAAATCTTTGGTGTCTTTATCGGTGAGACCC
AAATATCCTTGTTCATATACATTCTCAACAAAACATTTCATTAGAAAGGG
GAGCGAATGGTGTCTAGACGGGATAAATTCACACAGTTTCCCAGTTAGTT
CCATATCTTTTGTAATATCTTCACATTTTAAAAGAGAGTCGAACCAACTT
TCAAATAGACGATCATTATTGAATATTTGCACGAAGATTTTGACCCATAA
ACCTCGCTTTGGAATATCGTCAGAATTTTCGAGATTATATAACGCAATAC
AAATGACTATATCAGCGATTTCATTTATTCCACTTTTGGAAGCGATATCC
AACCATTTAATATGCTGTTTCCAATGACATTTTTCCACAACTTTTTCTAC
TGTCGCTTTGATGTCTTCCCAAGACACAGATTTGAATAATTCTGCTATTG
GTTCTTCAGTGCCATCACAGATCTGATAAACAAGTTCCTCTTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
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| TCONS_00062471-exon-scaffold_364-1491911889:376018..378226 | TCONS_00062471-exon-scaffold_364-1491911889:376018..378226 | Clytia hemisphaerica | exon |
| TCONS_00062471-exon-scaffold_364-1510915933:376018..378226 | TCONS_00062471-exon-scaffold_364-1510915933:376018..378226 | Clytia hemisphaerica | exon |
| TCONS_00062471-exon-scaffold_364-1575043694:376018..378226 | TCONS_00062471-exon-scaffold_364-1575043694:376018..378226 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| scaffold_364 | supercontig | scaffold_364:376018..378226 . |
Blast
The following BLAST results are available for this feature:
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