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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00062467 ID=TCONS_00062467|Name=TCONS_00062467|organism=Clytia hemisphaerica|type=transcript|length=1081bp
NTTCTCATGGAAGAGCAACAAACTTCACATCCTgatttcaaaaagcattt
aagATTATTTTTGAGAGAATATCCAGCAAATTTGTATGTGGAACACCAAT
CAGATACTATCGTTGTTatttcaaatttgttgaaagaggCTCAAATGCCT
GATTTGACCTTACTTTATTTAAAGCAGGTCATAATATCGAAAGTTAAGCA
CGAAGAGAAACTCGTTTATCAGATCTGTGATGGCATTGAAGAACCAATAG
CAGAATTATTCAAATCTGTGTCTTGGGAAGACGTCAAAGAGACAGTAGAA
AAAGTTGTGGAAAAATGTTATTGGAAACAGCATGTTAAATGGTTAGATAT
CGCTTCCAAAAGTGGAATAAATGAAATTGCTGATATAGTCATTTGTATTG
CGTTCGATAAACTTGAAAAGTATGATGATCTTCCGGAGCCAGATTTGTGG
TTTAGAATTTTCGAGCAAGTATTTAAAGGCGGTTGTTTATTTGATAGTTG
GTTTGACTCTATTTTGAcatgtgaaaatattttaacaagTATGGAACTAA
CGGGAAAACTTTGTGAACATTTTGCTGTAATTGGTGATCCATTTCTGTCG
TTCTTAATGAGATGTTTTTCTAATAGTATTCAGTATCAAGAATACATGGA
CCTCACTGAACAAAAAATGGAAGAATTTACAAACATTTCGATGATTTTTA
TTGTCAATTATGACAGATCCAAAAAAGAACTCACCGAACTTTGCGATACT
CTGATTGATACGGGAAACTTCTCCACGCTAGGAAGTTTACTTATAAATAT
ATGCAAGAGAAAATTGTCTAATACAGCAGCTTTTGACATGATGTTTGAAA
AATACTTCGATGAAGTATCAATAATGGATCCTAACCGTGATTTTGCTTAT
GATGAAATTGACCATTGCTCTGAAATTTTGCTACGTTCGAAGTATTCAAA
GGATGTCAGAGTTACCAAAATATTTCTCGATCTCTGTAAAAGATTCAATG
ATCCAGATGATCTATGCTTCAGTATTAGAAGAACTATAGATGTTTTATTA
GTCACTGAAGAATCTGAAATCTTTTTAAATN Run BLAST on NCBI protein sequence of TCONS_00062467-protein >TCONS_00062467-protein ID=TCONS_00062467-protein|Name=TCONS_00062467-protein|organism=Clytia hemisphaerica|type=polypeptide|length=360bp
XLMEEQQTSHPDFKKHLRLFLREYPANLYVEHQSDTIVVISNLLKEAQMP
DLTLLYLKQVIISKVKHEEKLVYQICDGIEEPIAELFKSVSWEDVKETVE
KVVEKCYWKQHVKWLDIASKSGINEIADIVICIAFDKLEKYDDLPEPDLW
FRIFEQVFKGGCLFDSWFDSILTCENILTSMELTGKLCEHFAVIGDPFLS
FLMRCFSNSIQYQEYMDLTEQKMEEFTNISMIFIVNYDRSKKELTELCDT
LIDTGNFSTLGSLLINICKRKLSNTAAFDMMFEKYFDEVSIMDPNRDFAY
DEIDHCSEILLRSKYSKDVRVTKIFLDLCKRFNDPDDLCFSIRRTIDVLL
VTEESEIFLN Run BLAST on NCBI transcript from alignment at scaffold_364:364756..365836 Legend: exonthree_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00062467 ID=TCONS_00062467|Name=TCONS_00062467|organism=Clytia hemisphaerica|type=transcript|length=1081bp|location=Sequence derived from alignment at scaffold_364:364756..365836 (Clytia hemisphaerica)
NATTTAAAAAGATTTCAGATTCTTCAGTGACTAATAAAACATCTATAGTT
CTTCTAATACTGAAGCATAGATCATCTGGATCATTGAATCTTTTACAGAG
ATCGAGAAATATTTTGGTAACTCTGACATCCTTTGAATACTTCGAACGTA
GCAAAATTTCAGAGCAATGGTCAATTTCATCATAAGCAAAATCACGGTTA
GGATCCATTATTGATACTTCATCGAAGTATTTTTCAAACATCATGTCAAA
AGCTGCTGTATTAGACAATTTTCTCTTGCATATATTTATAAGTAAACTTC
CTAGCGTGGAGAAGTTTCCCGTATCAATCAGAGTATCGCAAAGTTCGGTG
AGTTCTTTTTTGGATCTGTCATAATTGACAATAAAAATCATCGAAATGTT
TGTAAATTCTTCCATTTTTTGTTCAGTGAGGTCCATGTATTCTTGATACT
GAATACTATTAGAAAAACATCTCATTAAGAACGACAGAAATGGATCACCA
ATTACAGCAAAATGTTCACAAAGTTTTCCCGTTAGTTCCATActtgttaa
aatattttcacatgTCAAAATAGAGTCAAACCAACTATCAAATAAACAAC
CGCCTTTAAATACTTGCTCGAAAATTCTAAACCACAAATCTGGCTCCGGA
AGATCATCATACTTTTCAAGTTTATCGAACGCAATACAAATGACTATATC
AGCAATTTCATTTATTCCACTTTTGGAAGCGATATCTAACCATTTAACAT
GCTGTTTCCAATAACATTTTTCCACAACTTTTTCTACTGTCTCTTTGACG
TCTTCCCAAGACACAGATTTGAATAATTCTGCTATTGGTTCTTCAATGCC
ATCACAGATCTGATAAACGAGTTTCTCTTCGTGCTTAACTTTCGATATTA
TGACCTGCTTTAAATAAAGTAAGGTCAAATCAGGCATTTGAGcctctttc
aacaaatttgaaatAACAACGATAGTATCTGATTGGTGTTCCACATACAA
ATTTGCTGGATATTCTCTCAAAAATAATcttaaatgctttttgaaatcAG
GATGTGAAGTTTGTTGCTCTTCCATGAGAAN Coding sequence (CDS) from alignment at scaffold_364:364756..365836 >TCONS_00062467 ID=TCONS_00062467|Name=TCONS_00062467|organism=Clytia hemisphaerica|type=CDS|length=1080bp|location=Sequence derived from alignment at scaffold_364:364756..365836 (Clytia hemisphaerica)
ATTTAAAAAGATTTCAGATTCTTCAGTGACTAATAAAACATCTATAGTTC
TTCTAATACTGAAGCATAGATCATCTGGATCATTGAATCTTTTACAGAGA
TCGAGAAATATTTTGGTAACTCTGACATCCTTTGAATACTTCGAACGTAG
CAAAATTTCAGAGCAATGGTCAATTTCATCATAAGCAAAATCACGGTTAG
GATCCATTATTGATACTTCATCGAAGTATTTTTCAAACATCATGTCAAAA
GCTGCTGTATTAGACAATTTTCTCTTGCATATATTTATAAGTAAACTTCC
TAGCGTGGAGAAGTTTCCCGTATCAATCAGAGTATCGCAAAGTTCGGTGA
GTTCTTTTTTGGATCTGTCATAATTGACAATAAAAATCATCGAAATGTTT
GTAAATTCTTCCATTTTTTGTTCAGTGAGGTCCATGTATTCTTGATACTG
AATACTATTAGAAAAACATCTCATTAAGAACGACAGAAATGGATCACCAA
TTACAGCAAAATGTTCACAAAGTTTTCCCGTTAGTTCCATActtgttaaa
atattttcacatgTCAAAATAGAGTCAAACCAACTATCAAATAAACAACC
GCCTTTAAATACTTGCTCGAAAATTCTAAACCACAAATCTGGCTCCGGAA
GATCATCATACTTTTCAAGTTTATCGAACGCAATACAAATGACTATATCA
GCAATTTCATTTATTCCACTTTTGGAAGCGATATCTAACCATTTAACATG
CTGTTTCCAATAACATTTTTCCACAACTTTTTCTACTGTCTCTTTGACGT
CTTCCCAAGACACAGATTTGAATAATTCTGCTATTGGTTCTTCAATGCCA
TCACAGATCTGATAAACGAGTTTCTCTTCGTGCTTAACTTTCGATATTAT
GACCTGCTTTAAATAAAGTAAGGTCAAATCAGGCATTTGAGcctctttca
acaaatttgaaatAACAACGATAGTATCTGATTGGTGTTCCACATACAAA
TTTGCTGGATATTCTCTCAAAAATAATcttaaatgctttttgaaatcAGG
ATGTGAAGTTTGTTGCTCTTCCATGAGAAN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00062467-exon-scaffold_364-1491911889:364756..365836 | TCONS_00062467-exon-scaffold_364-1491911889:364756..365836 | Clytia hemisphaerica | exon |
| TCONS_00062467-exon-scaffold_364-1510915933:364756..365836 | TCONS_00062467-exon-scaffold_364-1510915933:364756..365836 | Clytia hemisphaerica | exon |
| TCONS_00062467-exon-scaffold_364-1575043694:364756..365836 | TCONS_00062467-exon-scaffold_364-1575043694:364756..365836 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_364 | supercontig | scaffold_364:364756..365836 . |
Blast
The following BLAST results are available for this feature:
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