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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00062350 ID=TCONS_00062350|Name=TCONS_00062350|organism=Clytia hemisphaerica|type=transcript|length=3215bp
CGAACTACATAACCGAAGGAATAACGTTTTTTTCGATAGTTGTTGCCAAA
CCTTCATGTTCAATCTTCTCGTTATCTTGGACTTACAACAACACCAAACA
GTTTGCTTTGAAGAATGCTACAAGAAGGATGACAATAATCAATCGAACAT
GAATTGTAACGCCTCGCTGGCTCAGAAGAAATCTCGTTTACTCCACCTTC
CCAATCATAAAAAGCCTTCCAACAAGAAAGACAACATCTCTCGTCTCCTT
GGTAACATCAACAATTATCCACCATTAAACAACCCTCGTTACGtcattca
aaatggtagacatcCAACGATTATTTGGTGGACAAACTCGTTTTATCCGC
ATGATGAAAAAGACACCATTTTGCAATGTCCACGTGGTCCATGTCATGTG
ACCTCCAACAGAGAATATTATTGGTCAAACACAACAAGAGCTTTTGTTTT
CTATGGAACATCCTTTAGAGCAAATGATTTACCTTTGCCTCGATTGCCTC
ACCATGAATGGGCGTTAATTCATGAAGAATCTCCCAAAAATAATTGGATT
TTGTCTGATTCTTTAGGTATAAGGTTCCAAAAAAAAGAAGGACTTGGGAT
AGCTGTTTACGTACAACGCGATTGTGAGCCTCCGTCCGATAGAGACGCAT
ATGTCCGAGAATTGATGAAACACATCAAAATTGATTCGTACGGACCTTGC
GTAAACAACAAGAAAATGCCAAGAGAAATCAACGGATTTGTTAAACTCTC
ATCCgaaaaatattatcattttttagcaaagtacaaatttcaaatcgCTT
TTGAGAATTGTCGTTGCAAAGATTACATGACTGAAAAAGTGTTTCGACCA
TTATGCATTGGATCGGTACCGGTTTATTTGGGTTCTAAAGAAGCACGTGA
TTTAATGCCTAGCAACAAATCAATCATAATGGTAGATGATTTCGAATCAC
CGAAAGATTTAGCTAATTTTTTAATCGCAGTTAACGCCAACGATACGCTT
TATGAGGAATATTTACAACACAGGAAAACAAAGACCACCACAAAcccaaa
acttttaaacatcTTAAAGAACCAGCCTTGGAAGTTACTtcacaaaaatt
ataaaacaaatttcGGACATTATATGTTTTCAGGATACACGTGTCACGTT
TGTGATCAACTTCACCTTCGTaaccaaaatttaaaacaacattTAAAAGA
CCGGAATAAACATCCTATTATGCCACCACGTGTAGCTGACCAATCACATT
TAGGCTGTCCCTTGCCAGTCCGCACTATACAACGGCCCAATGAGGACCAT
TATTATAAACAAACAGTATATAACTATGGCAACGATGAAGCACAAGCCCT
GGTACAGATGTTACAGGCTAATGAAACTGACACAAAAACATTTGAGAGAA
AATATCTGAAGAGAAAGACGGATAGATATccctgatttttttaaaaagct
aaTTCTCAACGCGTAAACCGTCAgtcgtttttttgttttgatggggtttt
gaaagtaaaaaagttttcttaGTAAGTACCAATGCACCTTTTAGACGCTT
TGTACTTTGttatacagtaaaacctctaattaacggacactctaaaaggc
ggacacctctgattagcggacaactTCATTTTTCCCGGCCGTTTCCttgt
caaatcctcataaaaaagtttctaaaaggcggacactcaattagcaaacc
ctctgattagcggacaaattttttcaaacgaaatagccaaaacccctatt
ttagctctccaattaccggacattgaatatcaaacgggtcacagacgtcc
aaaatcaaaaaaaagtttttgccaCCGAGCGGAGCGCAGCGGAGCATAGG
TGGCGTAATAGTTTCGCGATGAGTGAGAGGTTAgtgaaaatttttgtctg
tttgtttgttttttttttgtcgccTTTTTTTTCCGTAAGTTTAGCATTCC
GTAGTTTATCCGAGCAAtacttttggggcgcaaattatggcgtgggtgtt
tagctgcgggcgtactacggtcaatattctaaaggtggactcactcacat
tcatcgtgagaactttttaatggctgcttgactgcacatgcttttgaaac
ttgctgctgctgtataaattttttctggtctgtagagtatttaaagaggt
ttattattcgtttactactaattattttatgtttgtgtagttagtgaatg
caccaataaattgataatgctacaaaaagagttaattttccacaacaaca
acaCTAAACAGCAACACGTAGCCCTCTTCTTCactaaactacaaacagca
caggtatctttttttccttttttcaccagatagttatgtgttaaatgtta
accagttgtgacaaacagtcagttttagcaagagTATTTCCACCATttag
taattatttttttgtattcgaACTGTCGAACTATCCAACGAAATCAAaca
atagctgttcgattaccgtgCCTGATTTGGTAAGATTAGTTTGATTAcaa
actgtcatcaaacttatatattatatataagtttgatgacagtttttaat
ctgatgaagtttgatgGTGTTCAATGAGTTTGGTTCCAACAgcccaggcg
atgtcaaccgaaccctatcaaaccgaTTTTTGTGATCGAACCACTAAATT
TCATCGAACGGTTAggtgtttgattaccgaacctgatcgaacagtaatcg
aactttaccggaaaatcttcagtttgattaaagttcgattacttTTATCG
CAGTTCGATCaagttcaatcaatgtttttgtagctcaaatggttccctta
caatcattggattagcAGAAAAGAGTTGTTCATGTGCTCCGAGAAtgatt
tgtaaacgaaaaccgtaaatcaaacatcaatcgaactaatcgaaccttgc
cggaatttcttggttcgatttggttcggtaaTCTAACAGTTCAATTGATA
TCGCCCGGttgatgggatgatagatatttgcCTGCTCTTTAAGCATTTTA
gtgtgggcgtctgctaataagccgccagagatgggcaacaaggtaataaa
tcaagctTCAATATctaacttcaccgatcttgatacaacGTTTGCTATTc
aggatttttattttgaattattaACAACTTCCCATTTCCGTACTaagatt
cttgatacttttctggaatcttttcctatatatattttacggGATAACCA
GCAAGAAATTGGGGA Run BLAST on NCBI protein sequence of TCONS_00062350-protein >TCONS_00062350-protein ID=TCONS_00062350-protein|Name=TCONS_00062350-protein|organism=Clytia hemisphaerica|type=polypeptide|length=477bp
ELHNRRNNVFFDSCCQTFMFNLLVILDLQQHQTVCFEECYKKDDNNQSNM
NCNASLAQKKSRLLHLPNHKKPSNKKDNISRLLGNINNYPPLNNPRYVIQ
NGRHPTIIWWTNSFYPHDEKDTILQCPRGPCHVTSNREYYWSNTTRAFVF
YGTSFRANDLPLPRLPHHEWALIHEESPKNNWILSDSLGIRFQKKEGLGI
AVYVQRDCEPPSDRDAYVRELMKHIKIDSYGPCVNNKKMPREINGFVKLS
SEKYYHFLAKYKFQIAFENCRCKDYMTEKVFRPLCIGSVPVYLGSKEARD
LMPSNKSIIMVDDFESPKDLANFLIAVNANDTLYEEYLQHRKTKTTTNPK
LLNILKNQPWKLLHKNYKTNFGHYMFSGYTCHVCDQLHLRNQNLKQHLKD
RNKHPIMPPRVADQSHLGCPLPVRTIQRPNEDHYYKQTVYNYGNDEAQAL
VQMLQANETDTKTFERKYLKRKTDRYP Run BLAST on NCBI transcript from alignment at scaffold_363:67633..73204- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00062350 ID=TCONS_00062350|Name=TCONS_00062350|organism=Clytia hemisphaerica|type=transcript|length=5572bp|location=Sequence derived from alignment at scaffold_363:67633..73204- (Clytia hemisphaerica)
CGAACTACATAACCGAAGGAATAACGTTTTTTTCGATAGTTGTTGCCAAA
GTTAGTAATTAATAACCGCTACTTTTTAACGTCATCAAAGAATGATTCTA
ATGCTAAAGGAATGCCGATATAATTATCTTGTTCATGCAAAGCAATCGAA
AATAAAACATCAAAATGATTACTATAGTATAACTTTTACAAATCTTTTGA
ACAGTATCAGTTCATAAAAAACAGAGATTGCAACTTTGTATTTTTTGATC
AACTTTTGATATTGATTTTCTTTTAAATCGACTTTTGAAATGCTTCCTTC
CTTGTTAGCCTTCATGTTCAATCTTCTCGTTATCTTGGACTTACAACAAC
ACCAAACAGTTTGCTTTGAAGAATGCTACAAGAAGGATGACAATAATCAA
TCGAACATGAATTGTAACGCCTCGCTGGCTCAGAAGAAATCTCGTAAGAA
AGTTTTTTGAGTTTTAAGCCTGAAAATGTTCTTATTTCACTATCTTTTTA
TTACTTGCATCCATTTCCCGAAATCAGGGCCGGTGGAAGCGAGGAGACTG
GGGAGACTTCAGCCTCCCCACTTTTGAATAAATGAGATTTCTTTTCTCAA
ATTCTAAGTAGATTTTATCTCATTTTGAGCCTTAAGACTCCCCACTTTAA
CGGTTGTTCCTCCGGGCCTGGAAATTGGTTTAAAATGTTCTTATATAGTA
TGTTTTTTAAAAACCTGTTTCTTTATAAGAGTTCCCGCACCATACTTCAT
AACTCGTTCCAGGGTTCTATTCATGTCCATCAGTAAAATCAAAAACAAAA
TATTGGTGCAAGTGGCTCTGAGGTTAGAGATTAGTATCAGTTTCTAGAGT
TTGTAAATGCTTACTTTACTAAATTAAGCATATTTTCAATTTCATAATTG
AAAATGATAACTAAGGAAAGACTAAGGGCTTTAAGTCCATATTGAGTTTA
AGTTAAAGCCCAAATAGCTGGAGAGAAGTCTTCAGCCTTTCTCAAGCAAG
AAAAAGTGAAGCTTTAAGATTTACACCACTTTTGGAATAACGGATTGAAT
CTAGTGCTTTCTTTACGGCGATGGATTTTACTTTAAAAACAGCGTCTATT
TGAGAAAACAAACCTTTCGGGACTTTAAGCTCAATATATTAGGGCTTTTA
AGGTTTGCTCTTACCAGTGATGAAATAGCGATCAATGAAGGAACGGTGTG
GTACATGGTTTTGTACATTTTATCGTTTTCTATACTACTACATAGGTTTA
CTCCACCTTCCCAATCATAAAAAGCCTTCCAACAAGAAAGACAACATCTC
TCGTCTCCTTGGTAACATCAACAATTATCCACCATTAAACAACCCTCGTT
ACGTCATTCAAAATGGTAGACATCCAACGATTATTTGGTGGACAAACTCG
TTTTATCCGCATGATGAAAAAGACACCATTTTGCAATGTCCACGTGGTCC
ATGTCATGTGACCTCCAACAGAGAATATTATTGGTCAAACACAACAAGAG
CTTTTGTTTTCTATGGAACATCCTTTAGAGCAAATGATTTACCTTTGCCT
CGATTGCCTCACCATGAATGGGCGTTAATTCATGAAGAATCTCCCAAAAA
TAATTGGATTTTGTCTGATTCTTTAGGTATAAGGTAAGCTCAGTATAAAT
AATTTTCAGTACGTACGCATCCAGAAGTTGAAGGCCTCGAAAGCTCTTAA
CATTTTGACAGCCCTTTCGATTGACTTCCAAATTTGCCATACTCACCAAC
TTTGCCAAATCCACAATTTCAATGTCAAAAGATCACAGCTTCATGGCAAA
TTTGTACATCGCTACTCTGCCATTATGATTTCCGTTTTGTGATGCTTAGT
CAGCATTTTTCTGTCGGCGTTTGTAAAGCGAACGATTTTTTAACCAATCA
AATTGCCGATCGGCATTGTTTTGCTTCAGCATCGGAAGGTCTTCTATTTT
TCAAAAACTTTGGCAAAAGTGGCAAAATTGGAGCCGAAAAGAACACAGGT
CTCGTGGGAACAGTGTTTTGTATNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCTCAAATATTACG
ACCATGATTGTAGAAATACTCCAACAAAAATTAAGTGAGAAAGAATTTTT
TTTGTTAACTGTAATCTGTTCTTTTTTAAGGTTCCAAAAAAAAGAAGGAC
TTGGGATAGCTGTTTACGTACAACGCGATTGTGAGCCTCCGTCCGATAGA
GACGCATATGTCCGAGAATTGATGAAACACATCAAAATTGATTCGTACGG
ACCTTGCGTAAACAACAAGAAAATGCCAAGAGAAATCAACGGATTTGTTA
AACTCTCATCCGAAAAATATTATCATTTTTTAGCAAAGTACAAATTTCAA
ATCGCTTTTGAGAATTGTCGTTGCAAAGATTACATGACTGAAAAAGTGTT
TCGACCATTATGCATTGGATCGGTACCGGTTTATTTGGGTTCTAAAGAAG
CACGTGATTTAATGCCTAGCAACAAATCAATCATAATGGTAGATGATTTC
GAATCACCGAAAGATTTAGCTAATTTTTTAATCGCAGTTAACGCCAACGA
TACGCTTTATGAGGAATATTTACAACACAGGAAAACAAAGACCACCACAA
ACCCAAAACTTTTAAACATCTTAAAGAACCAGCCTTGGAAGTTACTTCAC
AAAAATTATAAAACAAATTTCGGACATTATATGTTTTCAGGATACACGTG
TCACGTTTGTGATCAACTTCACCTTCGTAACCAAAATTTAAAACAACATT
TAAAAGACCGGAATAAACATCCTATTATGCCACCACGTGTAGCTGACCAA
TCACATTTAGGCTGTCCCTTGCCAGTCCGCACTATACAACGGCCCAATGA
GGACCATTATTATAAACAAACAGTATATAACTATGGCAACGATGAAGCAC
AAGCCCTGGTACAGATGTTACAGGCTAATGAAACTGACACAAAAACATTT
GAGAGAAAATATCTGAAGAGAAAGACGGATAGATATCCCTGATTTTTTTA
AAAAGCTAATTCTCAACGCGTAAACCGTCAGTCGTTTTTTTGTTTTGATG
GGGTTTTGAAAGTAAAAAAGTTTTCTTAGTAAGTACCAATGCACCTTTTA
GACGCTTTGTACTTTGTTATACAGTAAAACCTCTAATTAACGGACACTCT
AAAAGGCGGACACCTCTGATTAGCGGACAACTTCATTTTTCCCGGCCGTT
TCCTTGTCAAATCCTCATAAAAAAGTTTCTAAAAGGCGGACACTCAATTA
GCAAACCCTCTGATTAGCGGACAAATTTTTTCAAACGAAATAGCCAAAAC
CCCTATTTTAGCTCTCCAATTACCGGACATTGAATATCAAACGGGTCACA
GACGTCCAAAATCAAAAAAAAGTTTTTGCCACCGAGCGGAGCGCAGCGGA
GCATAGGTGGCGTAATAGTTTCGCGATGAGTGAGAGGTTAGTGAAAATTT
TTGTCTGTTTGTTTGTTTTTTTTTTGTCGCCTTTTTTTTCCGTAAGTTTA
GCATTCCGTAGTTTATCCGAGCAATACTTTTGGGGCGCAAATTATGGCGT
GGGTGTTTAGCTGCGGGCGTACTACGGTCAATATTCTAAAGGTGGACTCA
CTCACATTCATCGTGAGAACTTTTTAATGGCTGCTTGACTGCACATGCTT
TTGAAACTTGCTGCTGCTGTATAAATTTTTTCTGGTCTGTAGAGTATTTA
AAGAGGTTTATTATTCGTTTACTACTAATTATTTTATGTTTGTGTAGTTA
GTGAATGCACCAATAAATTGATAATGCTACAAAAAGAGTTAATTTTCCAC
AACAACAACACTAAACAGCAACACGTAGCCCTCTTCTTCACTAAACTACA
AACAGCACAGGTATCTTTTTTTCCTTTTTTCACCAGATAGTTATGTGTTA
AATGTTAACCAGTTGTGACAAACAGTCAGTTTTAGCAAGAGTATTTCCAC
CATTTAGTAATTATTTTTTTGTATTCGAACTGTCGAACTATCCAACGAAA
TCAAACAATAGCTGTTCGATTACCGTGCCTGATTTGGTAAGATTAGTTTG
ATTACAAACTGTCATCAAACTTATATATTATATATAAGTTTGATGACAGT
TTTTAATCTGATGAAGTTTGATGGTGTTCAATGAGTTTGGTTCCAACAGC
CCAGGCGATGTCAACCGAACCCTATCAAACCGATTTTTGTGATCGAACCA
CTAAATTTCATCGAACGGTTAGGTGTTTGATTACCGAACCTGATCGAACA
GTAATCGAACTTTACCGGAAAATCTTCAGTTTGATTAAAGTTCGATTACT
TTTATCGCAGTTCGATCAAGTTCAATCAATGTTTTTGTAGCTCAAATGGT
TCCCTTACAATCATTGGATTAGCAGAAAAGAGTTGTTCATGTGCTCCGAG
AATGATTTGTAAACGAAAACCGTAAATCAAACATCAATCGAACTAATCGA
ACCTTGCCGGAATTTCTTGGTTCGATTTGGTTCGGTAATCTAACAGTTCA
ATTGATATCGCCCGGTTGATGGGATGATAGATATTTGCCTGCTCTTTAAG
CATTTTAGTGTGGGCGTCTGCTAATAAGCCGCCAGAGATGGGCAACAAGG
TAATAAATCAAGCTTCAATATCTAACTTCACCGATCTTGATACAACGTTT
GCTATTCAGGATTTTTATTTTGAATTATTAACAACTTCCCATTTCCGTAC
TAAGATTCTTGATACTTTTCTGGAATCTTTTCCTATATATATTTTACGGG
ATAACCAGCAAGAAATTGGGGA Coding sequence (CDS) from alignment at scaffold_363:67633..73204- >TCONS_00062350 ID=TCONS_00062350|Name=TCONS_00062350|organism=Clytia hemisphaerica|type=CDS|length=5736bp|location=Sequence derived from alignment at scaffold_363:67633..73204- (Clytia hemisphaerica)
GTTCCAAAAAAAAGAAGGACTTGGGATAGCTGTTTACGTACAACGCGATT
GTGAGCCTCCGTCCGATAGAGACGCATATGTCCGAGAATTGATGAAACAC
ATCAAAATTGATTCGTACGGACCTTGCGTAAACAACAAGAAAATGCCAAG
AGAAATCAACGGATTTGTTAAACTCTCATCCGAAAAATATTATCATTTTT
TAGCAAAGTACAAATTTCAAATCGCTTTTGAGAATTGTCGTTGCAAAGAT
TACATGACTGAAAAAGTGTTTCGACCATTATGCATTGGATCGGTACCGGT
TTATTTGGGTTCTAAAGAAGCACGTGATTTAATGCCTAGCAACAAATCAA
TCATAATGGTAGATGATTTCGAATCACCGAAAGATTTAGCTAATTTTTTA
ATCGCAGTTAACGCCAACGATACGCTTTATGAGGAATATTTACAACACAG
GAAAACAAAGACCACCACAAACCCAAAACTTTTAAACATCTTAAAGAACC
AGCCTTGGAAGTTACTTCACAAAAATTATAAAACAAATTTCGGACATTAT
ATGTTTTCAGGATACACGTGTCACGTTTGTGATCAACTTCACCTTCGTAA
CCAAAATTTAAAACAACATTTAAAAGACCGGAATAAACATCCTATTATGC
CACCACGTGTAGCTGACCAATCACATTTAGGCTGTCCCTTGCCAGTCCGC
ACTATACAACGGCCCAATGAGGACCATTATTATAAACAAACAGTATATAA
CTATGGCAACGATGAAGCACAAGCCCTGGTACAGATGTTACAGGCTAATG
AAACTGACACAAAAACATTTGAGAGAAAATATCTGAAGAGAAAGACGGAT
AGATATCCCTGAGTTTACTCCACCTTCCCAATCATAAAAAGCCTTCCAAC
AAGAAAGACAACATCTCTCGTCTCCTTGGTAACATCAACAATTATCCACC
ATTAAACAACCCTCGTTACGTCATTCAAAATGGTAGACATCCAACGATTA
TTTGGTGGACAAACTCGTTTTATCCGCATGATGAAAAAGACACCATTTTG
CAATGTCCACGTGGTCCATGTCATGTGACCTCCAACAGAGAATATTATTG
GTCAAACACAACAAGAGCTTTTGTTTTCTATGGAACATCCTTTAGAGCAA
ATGATTTACCTTTGCCTCGATTGCCTCACCATGAATGGGCGTTAATTCAT
GAAGAATCTCCCAAAAATAATTGGATTTTGTCTGATTCTTTAGGTATAAG
CCTTCATGTTCAATCTTCTCGTTATCTTGGACTTACAACAACACCAAACA
GTTTGCTTTGAAGAATGCTACAAGAAGGATGACAATAATCAATCGAACAT
GAATTGTAACGCCTCGCTGGCTCAGAAGAAATCTCGAACTACATAACCGA
AGGAATAACGTTTTTTTCGATAGTTGTTGCCAAAGTTCCAAAAAAAAGAA
GGACTTGGGATAGCTGTTTACGTACAACGCGATTGTGAGCCTCCGTCCGA
TAGAGACGCATATGTCCGAGAATTGATGAAACACATCAAAATTGATTCGT
ACGGACCTTGCGTAAACAACAAGAAAATGCCAAGAGAAATCAACGGATTT
GTTAAACTCTCATCCGAAAAATATTATCATTTTTTAGCAAAGTACAAATT
TCAAATCGCTTTTGAGAATTGTCGTTGCAAAGATTACATGACTGAAAAAG
TGTTTCGACCATTATGCATTGGATCGGTACCGGTTTATTTGGGTTCTAAA
GAAGCACGTGATTTAATGCCTAGCAACAAATCAATCATAATGGTAGATGA
TTTCGAATCACCGAAAGATTTAGCTAATTTTTTAATCGCAGTTAACGCCA
ACGATACGCTTTATGAGGAATATTTACAACACAGGAAAACAAAGACCACC
ACAAACCCAAAACTTTTAAACATCTTAAAGAACCAGCCTTGGAAGTTACT
TCACAAAAATTATAAAACAAATTTCGGACATTATATGTTTTCAGGATACA
CGTGTCACGTTTGTGATCAACTTCACCTTCGTAACCAAAATTTAAAACAA
CATTTAAAAGACCGGAATAAACATCCTATTATGCCACCACGTGTAGCTGA
CCAATCACATTTAGGCTGTCCCTTGCCAGTCCGCACTATACAACGGCCCA
ATGAGGACCATTATTATAAACAAACAGTATATAACTATGGCAACGATGAA
GCACAAGCCCTGGTACAGATGTTACAGGCTAATGAAACTGACACAAAAAC
ATTTGAGAGAAAATATCTGAAGAGAAAGACGGATAGATATCCCTGAGTTT
ACTCCACCTTCCCAATCATAAAAAGCCTTCCAACAAGAAAGACAACATCT
CTCGTCTCCTTGGTAACATCAACAATTATCCACCATTAAACAACCCTCGT
TACGTCATTCAAAATGGTAGACATCCAACGATTATTTGGTGGACAAACTC
GTTTTATCCGCATGATGAAAAAGACACCATTTTGCAATGTCCACGTGGTC
CATGTCATGTGACCTCCAACAGAGAATATTATTGGTCAAACACAACAAGA
GCTTTTGTTTTCTATGGAACATCCTTTAGAGCAAATGATTTACCTTTGCC
TCGATTGCCTCACCATGAATGGGCGTTAATTCATGAAGAATCTCCCAAAA
ATAATTGGATTTTGTCTGATTCTTTAGGTATAAGCCTTCATGTTCAATCT
TCTCGTTATCTTGGACTTACAACAACACCAAACAGTTTGCTTTGAAGAAT
GCTACAAGAAGGATGACAATAATCAATCGAACATGAATTGTAACGCCTCG
CTGGCTCAGAAGAAATCTCGAACTACATAACCGAAGGAATAACGTTTTTT
TCGATAGTTGTTGCCAAAGTTCCAAAAAAAAGAAGGACTTGGGATAGCTG
TTTACGTACAACGCGATTGTGAGCCTCCGTCCGATAGAGACGCATATGTC
CGAGAATTGATGAAACACATCAAAATTGATTCGTACGGACCTTGCGTAAA
CAACAAGAAAATGCCAAGAGAAATCAACGGATTTGTTAAACTCTCATCCG
AAAAATATTATCATTTTTTAGCAAAGTACAAATTTCAAATCGCTTTTGAG
AATTGTCGTTGCAAAGATTACATGACTGAAAAAGTGTTTCGACCATTATG
CATTGGATCGGTACCGGTTTATTTGGGTTCTAAAGAAGCACGTGATTTAA
TGCCTAGCAACAAATCAATCATAATGGTAGATGATTTCGAATCACCGAAA
GATTTAGCTAATTTTTTAATCGCAGTTAACGCCAACGATACGCTTTATGA
GGAATATTTACAACACAGGAAAACAAAGACCACCACAAACCCAAAACTTT
TAAACATCTTAAAGAACCAGCCTTGGAAGTTACTTCACAAAAATTATAAA
ACAAATTTCGGACATTATATGTTTTCAGGATACACGTGTCACGTTTGTGA
TCAACTTCACCTTCGTAACCAAAATTTAAAACAACATTTAAAAGACCGGA
ATAAACATCCTATTATGCCACCACGTGTAGCTGACCAATCACATTTAGGC
TGTCCCTTGCCAGTCCGCACTATACAACGGCCCAATGAGGACCATTATTA
TAAACAAACAGTATATAACTATGGCAACGATGAAGCACAAGCCCTGGTAC
AGATGTTACAGGCTAATGAAACTGACACAAAAACATTTGAGAGAAAATAT
CTGAAGAGAAAGACGGATAGATATCCCTGAGTTTACTCCACCTTCCCAAT
CATAAAAAGCCTTCCAACAAGAAAGACAACATCTCTCGTCTCCTTGGTAA
CATCAACAATTATCCACCATTAAACAACCCTCGTTACGTCATTCAAAATG
GTAGACATCCAACGATTATTTGGTGGACAAACTCGTTTTATCCGCATGAT
GAAAAAGACACCATTTTGCAATGTCCACGTGGTCCATGTCATGTGACCTC
CAACAGAGAATATTATTGGTCAAACACAACAAGAGCTTTTGTTTTCTATG
GAACATCCTTTAGAGCAAATGATTTACCTTTGCCTCGATTGCCTCACCAT
GAATGGGCGTTAATTCATGAAGAATCTCCCAAAAATAATTGGATTTTGTC
TGATTCTTTAGGTATAAGCCTTCATGTTCAATCTTCTCGTTATCTTGGAC
TTACAACAACACCAAACAGTTTGCTTTGAAGAATGCTACAAGAAGGATGA
CAATAATCAATCGAACATGAATTGTAACGCCTCGCTGGCTCAGAAGAAAT
CTCGAACTACATAACCGAAGGAATAACGTTTTTTTCGATAGTTGTTGCCA
AAGTTCCAAAAAAAAGAAGGACTTGGGATAGCTGTTTACGTACAACGCGA
TTGTGAGCCTCCGTCCGATAGAGACGCATATGTCCGAGAATTGATGAAAC
ACATCAAAATTGATTCGTACGGACCTTGCGTAAACAACAAGAAAATGCCA
AGAGAAATCAACGGATTTGTTAAACTCTCATCCGAAAAATATTATCATTT
TTTAGCAAAGTACAAATTTCAAATCGCTTTTGAGAATTGTCGTTGCAAAG
ATTACATGACTGAAAAAGTGTTTCGACCATTATGCATTGGATCGGTACCG
GTTTATTTGGGTTCTAAAGAAGCACGTGATTTAATGCCTAGCAACAAATC
AATCATAATGGTAGATGATTTCGAATCACCGAAAGATTTAGCTAATTTTT
TAATCGCAGTTAACGCCAACGATACGCTTTATGAGGAATATTTACAACAC
AGGAAAACAAAGACCACCACAAACCCAAAACTTTTAAACATCTTAAAGAA
CCAGCCTTGGAAGTTACTTCACAAAAATTATAAAACAAATTTCGGACATT
ATATGTTTTCAGGATACACGTGTCACGTTTGTGATCAACTTCACCTTCGT
AACCAAAATTTAAAACAACATTTAAAAGACCGGAATAAACATCCTATTAT
GCCACCACGTGTAGCTGACCAATCACATTTAGGCTGTCCCTTGCCAGTCC
GCACTATACAACGGCCCAATGAGGACCATTATTATAAACAAACAGTATAT
AACTATGGCAACGATGAAGCACAAGCCCTGGTACAGATGTTACAGGCTAA
TGAAACTGACACAAAAACATTTGAGAGAAAATATCTGAAGAGAAAGACGG
ATAGATATCCCTGAGTTTACTCCACCTTCCCAATCATAAAAAGCCTTCCA
ACAAGAAAGACAACATCTCTCGTCTCCTTGGTAACATCAACAATTATCCA
CCATTAAACAACCCTCGTTACGTCATTCAAAATGGTAGACATCCAACGAT
TATTTGGTGGACAAACTCGTTTTATCCGCATGATGAAAAAGACACCATTT
TGCAATGTCCACGTGGTCCATGTCATGTGACCTCCAACAGAGAATATTAT
TGGTCAAACACAACAAGAGCTTTTGTTTTCTATGGAACATCCTTTAGAGC
AAATGATTTACCTTTGCCTCGATTGCCTCACCATGAATGGGCGTTAATTC
ATGAAGAATCTCCCAAAAATAATTGGATTTTGTCTGATTCTTTAGGTATA
AGCCTTCATGTTCAATCTTCTCGTTATCTTGGACTTACAACAACACCAAA
CAGTTTGCTTTGAAGAATGCTACAAGAAGGATGACAATAATCAATCGAAC
ATGAATTGTAACGCCTCGCTGGCTCAGAAGAAATCTCGAACTACATAACC
GAAGGAATAACGTTTTTTTCGATAGTTGTTGCCAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00062350-exon-scaffold_363-1575043694:73155..73204 | TCONS_00062350-exon-scaffold_363-1575043694:73155..73204 | Clytia hemisphaerica | exon |
| TCONS_00062350-exon-scaffold_363-1575043694:72762..72896 | TCONS_00062350-exon-scaffold_363-1575043694:72762..72896 | Clytia hemisphaerica | exon |
| TCONS_00062350-exon-scaffold_363-1575043694:71572..71959 | TCONS_00062350-exon-scaffold_363-1575043694:71572..71959 | Clytia hemisphaerica | exon |
| TCONS_00062350-exon-scaffold_363-1575043694:67633..70274 | TCONS_00062350-exon-scaffold_363-1575043694:67633..70274 | Clytia hemisphaerica | exon |
| TCONS_00062350-exon-scaffold_363-1510915933:73155..73204 | TCONS_00062350-exon-scaffold_363-1510915933:73155..73204 | Clytia hemisphaerica | exon |
| TCONS_00062350-exon-scaffold_363-1510915933:72762..72896 | TCONS_00062350-exon-scaffold_363-1510915933:72762..72896 | Clytia hemisphaerica | exon |
| TCONS_00062350-exon-scaffold_363-1510915933:71572..71959 | TCONS_00062350-exon-scaffold_363-1510915933:71572..71959 | Clytia hemisphaerica | exon |
| TCONS_00062350-exon-scaffold_363-1510915933:67633..70274 | TCONS_00062350-exon-scaffold_363-1510915933:67633..70274 | Clytia hemisphaerica | exon |
| TCONS_00062350-exon-scaffold_363-1491911889:73155..73204 | TCONS_00062350-exon-scaffold_363-1491911889:73155..73204 | Clytia hemisphaerica | exon |
| TCONS_00062350-exon-scaffold_363-1491911889:72762..72896 | TCONS_00062350-exon-scaffold_363-1491911889:72762..72896 | Clytia hemisphaerica | exon |
| TCONS_00062350-exon-scaffold_363-1491911889:71572..71959 | TCONS_00062350-exon-scaffold_363-1491911889:71572..71959 | Clytia hemisphaerica | exon |
| TCONS_00062350-exon-scaffold_363-1491911889:67633..70274 | TCONS_00062350-exon-scaffold_363-1491911889:67633..70274 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_363 | supercontig | scaffold_363:67633..73204 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008417 | fucosyltransferase activity |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016020 | membrane |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006486 | protein glycosylation |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0006486 |
protein glycosylation |
| cellular_component |
GO:0016020 |
membrane |
| molecular_function |
GO:0008417 |
fucosyltransferase activity |
Blast
BLAST of TCONS_00062350 vs. Swiss-Prot (Human)
Match: FUT11 (Alpha-(1,3)-fucosyltransferase 11 OS=Homo sapiens GN=FUT11 PE=1 SV=1) HSP 1 Score: 259.61 bits (662), Expect = 1.319e-75 Identity = 150/416 (36.06%), Postives = 218/416 (52.40%), Query Frame = 2
Query: 299 QNGRHPTIIWWTNSFYPHDEKDT-ILQCPRGPCHVTSNREYYWSNTTRAFVFYGTSFRANDLPLPRLPHHEWALIHEESPKNNWILSDSLGIRF--------------------------------------QKKEGLGIAVYVQRDCEPPSDRDAYVRELMKHIKIDSYGPCVNNKKMPR---EINGFVKLSSEKYYHFLAKYKFQIAFENCRCKDYMTEKVFRPLCIGSVPVYLGSKEARDLMPSNKSIIMVDDFESPKDLANFLIAVNANDTLYEEYLQHRXXXXXXXXXXXXXXXXQPWKL---LHKNYKTNFGHYMFSGYTCHVCDQLHLRNQNLKQHLKDRNKHPIMPPRVADQSHLGCPLPVRTI----QRPNEDHYYKQTVYNY--GNDEAQALVQMLQANETDTKTF 1393
+ G P ++WW+ +PH D+ ++C RG C + NR + TRA +FYGT FRA+ PLPRL H WAL+HEESP NN++LS GIR ++ G +Y+Q C+ P+DRD YVRELM+HI +DSYG C+ N+++P + + FL++YKF +A EN C DYMTEK++RP+ +G+VPVY GS RD MP+N S+I++DDFESP+ LA F+ ++ ND Y +YL +++ TN LL+ LK++ W + L NY +G+ C VCD R K H P+ P +A SH+ CP+P + P D + + + +Y G D+ +AL M+ NET+ F
Sbjct: 71 EAGDLPVLLWWSPGLFPHFPGDSERIECARGACVASRNRRALRDSRTRALLFYGTDFRASAAPLPRLAHQSWALLHEESPLNNFLLSHGPGIRLFNLTSTFSRHSDYPLSLQWLPGTAYLRRPVPPPMERAEWRRRGYAPLLYLQSHCDVPADRDRYVRELMRHIPVDSYGKCLQNRELPTARLQDTATATTEDPELLAFLSRYKFHLALENAICNDYMTEKLWRPMHLGAVPVYRGSPSVRDWMPNNHSVILIDDFESPQKLAEFIDFLDKNDEEYMKYLAYKQPGGITNQFLLDSLKHREWGVNDPLLPNY--------LNGFECFVCDYELARLDAEKAHAASPGDSPVFEPHIAQPSHMDCPVPTPGFGNVEEIPENDSWKEMWLQDYWQGLDQGEALTAMIHNNETEQTKF 478
The following BLAST results are available for this feature:
|
