TCONS_00062286 (transcript) - C. hemisphaerica

Overview
NameTCONS_00062286
Unique NameTCONS_00062286
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1027

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00062286 ID=TCONS_00062286|Name=TCONS_00062286|organism=Clytia hemisphaerica|type=transcript|length=1027bp
AAAGATTATGCTGGCTATTTATTATGCAGGAATGTTCAGcttctttaaaa
aactaataaaatggcAACAGTTGGAATCAGACCGTCATCTCAAGGACAAG
CAATAAATTTGAAAGATTTCGAGATCAACTATGATGCAGAGACGGAAGAA
TTCGATATGGAGTGTAAAAAGTTCATGAATGAGTTTGTTGGTCACATTTT
CGAAGCAGATGGTTATTCGACACAAGAAGACAAAGCGAAGTTTGGATTAT
TAGTCCAACACCAAGAAGGACGTTCATGGTTCGCTAAATTTGTTGATGGT
CAACGAGTCAAATCAAAAGAAGTAACCGAATTTGCATTTTATCGATTGGT
GCAATATTTTGCTGTTTGCCTATTTGAATGTAATGTAGCAGATGACTTTG
CACCAGCCACCACACTGATGAATATGTGTTTCACTTATAATTTCACCTCC
ACAAACGCTATCGGACGTACTGCTGGCCAGAGTTCAAAACAATTTGTATA
CGAATATCTTAAAGATCAACCAATTTGGAAATCACTTCGTTTCTGGGATT
CAGCCTTTTTGATGGCAATTCACGCTGATCGAACTAAGAGAATTGGAGCC
ATGTCTGGTTGGAATACATGGGACCAACAACAGAAAGATGACTTTGAAAT
TGGTGAAGAAAATTCTGCTTTTGCACATCTAGCGTCATTTCTTTACATGA
TGAATGCACTTGGCGTAGAGAAGAATGATCGAGAAATTTTTCGCAACAAG
ATGAGCACCATAGGAAATCTAAGAGAAGagCAAATCAGAGAGCTGGAAGA
GAGTATCGAAATATTACAATGAAACATAAATCGAAATGGTTCATGATAAT
TGGTAACTATTTTTATGTAAATATGATAATATTTTGACAaagttctattt
tttataattatagggaaaagaaaaataaagaattatttattttgatattt
gggTAAAAATTtgcagtttttattttttgtaggaATCACACTAGAATAGG
AAATTTTTCTTCGATGGTAGGtttatg
Run BLAST on NCBI

protein sequence of TCONS_00062286-protein

>TCONS_00062286-protein ID=TCONS_00062286-protein|Name=TCONS_00062286-protein|organism=Clytia hemisphaerica|type=polypeptide|length=253bp
MATVGIRPSSQGQAINLKDFEINYDAETEEFDMECKKFMNEFVGHIFEAD
GYSTQEDKAKFGLLVQHQEGRSWFAKFVDGQRVKSKEVTEFAFYRLVQYF
AVCLFECNVADDFAPATTLMNMCFTYNFTSTNAIGRTAGQSSKQFVYEYL
KDQPIWKSLRFWDSAFLMAIHADRTKRIGAMSGWNTWDQQQKDDFEIGEE
NSAFAHLASFLYMMNALGVEKNDREIFRNKMSTIGNLREEQIRELEESIE
ILQ
Run BLAST on NCBI

transcript from alignment at scaffold_362:929858..937456-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00062286 ID=TCONS_00062286|Name=TCONS_00062286|organism=Clytia hemisphaerica|type=transcript|length=7599bp|location=Sequence derived from alignment at scaffold_362:929858..937456- (Clytia hemisphaerica)
AAAGATTATGCTGGCTATTTATTATGCAGGAATGTTCAGGTTTGTCAAAA
TTAGATAATTTGATTTTCTCATTAAAAATACTCTTAAATACTAAATAACT
CTAAATAACTTGTGTCTTCTTATCTTTTCCTGGTATTGTAATTGGACTGG
TTAATAGAATATCGAAACTCCCTTCATGTATAATTTTCATTTAATGGCAA
TTTTTCATTAATTTAATTTTTAGCTTCTTTAAAAAACTAATAAAATGGCA
ACAGTTGGAATCAGACCGTCATCTCAAGGACAAGCAATAAATTTGAAAGG
TAAGAAGAATTTATTTCGAATTTAAATTATAATTGTTAATTAGAAGGTTT
TTTTCACTGTGATCTCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAACTTGATTTCATCGATTA
TTTCGATCTGGGAGAGATTTATTGGTTTCTAGGCTATATTTCAAGCCCTA
CCGGACCATTTTTGAACTTTTGGATCCTCACATCCTAGGGTTCTATCCAT
CAGTCTTAAGTCTAGCGTTAAAAATCTACCCTTCGAACCTAGTTTAGAGC
ACTTACAAATCGCTTGTGGTTTCAAAACACCCCGGTGAATTTCCCTTTTG
TGCCAAGTATTTTGTCACTGATTGTAGCTTCTATAAAGTTTTGCAAGAAA
AAAATTGTTCCACTCATTTCCTTGTTTAATCATCACAAGAAAAAGGAATT
GGAAAATAATTGCTTTTCAAGCACAGCTTAATTGGATTGCATTTGATATA
GGTTACAAAACCTATACAAGCGTGTAGAATGTGGTTTCTTATATTTTATA
TCTTAAAAATGATGGTAACATGTCGTCAAATGTAAAGTAATACTATGTGT
ATTTTTGCAAGTTTGTTATCTTCTGAAAGTTTGTTATCTTCTGAAAGTAT
GTTATCTTCTGAAAGTATGAGTTATATAGTTTTGCAAGTTGTATTAACTG
ATATGTATCATGTACCATGTGTACTACTGTAGTTCACTCCTTATGTAATA
TGCATCTTTCATGTGATACAATTGTAAAGTATTCTGTGATTGTTTCTATG
TTTGCTTTATGTTTGCTATGTTTTGTTTTTTTATCGAAATAGGTATTTGA
TGTCCATTAGGTATTGACGCTAGCTAGGAAAGTTCAGTGACATTGACTTT
CTTACAGTTCTTAGTTTAAGTTCAAAAACTTTACCTTTTGATCATGTAAT
ATTAAAGGATATTATTTTATACTTGATGCAATTGTAAAGTAGTCTGTGGT
AATTCTTTCAAATACCGTTAGCTTTTCTTTGGGATCCAAACTTTTTTTTT
ATTCTCGTCATTGATGTACTTTGTTGCTGTCTGCAAGATATTGCAAAAAA
AAAAAAATGGATATCCAAGCTTTAATCTATTTTTTGATTTTGATATTTTT
TGCTGTACTGCTGTTTACCGCCTGGGTTTATACAATGGGTTGACAGATTC
TTATCTACGAACTGATGATAGAGTATGCATGTTCTATAAATTGTAACGAT
GTAAGATTGTTTCATAGAGGTCAATAGACCTGAGAAATACACTTCTAAAT
ATGTGCTGTCTTCCGGCTTTTGAGTAAAAAACCTGGTCGTGGTAAACCAG
AAGTTTTTTGATAAAAATAAATTTACAAAAAGGTTGGATTTCCAGGTTAA
CATACAAAATATAGAAAAAGTACAAGATGTTGATGTTTGTGCATGAGCTG
TCTCACCGACCTATCAAAAATTCAGCAAGTAAAAGAGATTCTCTAACAGA
TGAGCTCATTGAATTATATGACAAAGGTAAAGCTCATAGTAACTAAGTAA
CCCATACCAAATATGATGTATCTATAGATTTTATGTTTTTTTTGTATGGA
TTTTGATATTGCACTGTGTGAACAGTTTCGACTCCAAACAATCAAATAAA
CCAAATATAGTATGGATCAAGATAATCGATTTCCCGATGTAATATTGTCT
GAAAAATCTCTCCTCTCAGTATGGTCATAGGTAGTTCTTAGATTTAAAAC
AGCCAGAGCCATTTTGATTTTATGCCAACTACGTTTGTCGTGTGTTATCA
AAAGGTTATTTTTGGTTTCATTTTGAGCTTAAAGCTGGATACTTTTATCC
TAAACTCATGATAAATTGGTAGTTTATGTATAAAATTTGAGGTTTATAAT
ATCCTGGGATATATTAAACAAGTACCTTTTTCTGATTCGATTATTGTAAT
GACTTTGTTATGTTTACAAAGCAGGAGATGAACAGCTGCAGATCACACTG
CACAATATTTTTTTGCTACGTTTTGATTTTTTCTTTCTTTTACAGATTTC
GAGATCAACTATGATGCAGAGACGGAAGAATTCGATATGGAGTGTAAAAA
GTTCATGAATGAGTTTGTTGGTCACATTTTCGAAGCAGAGTACGTTAAAG
TTGTCTTATTGAATCAATTATGACAGAGATATTACAGTTTGTTCCAAGCT
CTACCTCCACTGTAAACTCAGAATATATTTTCCCGCGTTTACTATCTCTT
TAACGGACGATGGAAGCGTTTATAGAATTCCATATTACCGAAGAAAAATT
ATTCTCTATGAGGCTAGAAACTAGCTCTAAACTTAGTATCTCGCTAATAA
TTGGTTAATCTTTTCAGTACTAAGAACTTCGTTGCTTTATCCCATACTGG
TTTACTATCAATTTTACTCTACCCGGCCTATGTTTTTACCCTTTGCCCCC
CAAGCATCACTTTTTGAGAAAAAAAGTACTTTTTTAAAAACTAGACCAAA
TTAACTCAATTTTAGTTAAGTTCAATTAAGTATCGTCTAAATCTGTCATT
CATCTTATGCAGCACTTATATTTTCACTTTTCAGTGGTTATTCGACACAA
GAAGACAAAGCGAAGTTTGGATTATTAGTCCAACACCAAGAAGGACGTTC
ATGGTTCGCTAAATTTGTTGATGGTCAACGAGTCAAATCAAAAGAAGTAA
CCGAATTTGCATTTTATCGATTGGTGCAATATTTTGCTGTTTGCCTATTT
GAGTAAGTTTATATAGGCTCTTATTGTCTTCTTCTTATAGTCGTTGTCAA
AGCAGAAGGACGAATCTTTCTATAAGATGAACCTTTGACAATGAAATTGG
CCCTTTCATCTTATAGAGATTAAATTTTTCCACATGACTCACGGCCGAAT
CTCGTTTTCAAAGGTTTATGTTATAGAAAAATTCAAACTTTTCTAAGATA
CGTATTTTGAGATTTGCCGTTTTGCCTTGACAACGACGTTATCAGATTTT
TTTTTGAAGTTTTTAGTAACTTGGTATCATAATGGTAGCACTACTCGAAG
TGGGTTAAAAAGATACAATGTTGTTTCCCGTGACGTGATAAATACTGAGA
AACAAAATACTACGCTACCTACAAATTATAGTAGTAGTACCTCAACAGCA
CACCGTCATAATTATTACTTTTAACATTTGACCGAAATTAAACCCCACAA
TCCTTTTCATCTTGATTCGAATAAGTGTTATTGACTTGCAAAAGCAATTA
ATGCAAAGGATGATGGAATTAAAACTCGGACAAACAGTAACTTTGATGTC
TATTTTTAGAATCACTGTGGTATGTTATTAGGGCGCACAATTATTATAAA
AAGACTTTTGCAGGCCAGGTTCGAGAAACTGCAGCTTTTATACAACACCG
GGGAAATATTTCATCGATCCTTTACTGATCATCTCTCTGTTCTTTCTTCA
GATGTAATGTAGCAGATGACTTTGCACCAGCCACCACACTGATGAATATG
TGTTTCACTTATAATTTCACCTCCACAAACGCTATCGGTAAGAAAATTCT
TATTCAAGTCCAGGTTTTTCACACCCTTTTTCTCACAGACCCGGTAGGAT
TCAGCCAGTCGGGTTAAAAATAACGGCTTGAAACTCGATAGTGATTGTGA
TATTCTCATTTTTTTATGACTGGAATTTGAATTATATTGTTTTCAAGTCT
GAAAATTCAGTGGGAATGGAAAGAGTAGCACAATATTTTGCAGTTTTTAT
TTGACTATATTCATCGGGGACGAAAAATCGGAGTATAATTTTCTACTGGG
AATTGATGGGAACGATATTTGGGCCAATCTTTCCAGTTGAAGGGGGTCCC
GCAAACTCTTTTTCCGTCAGCGGACGCAGACCTGATTTAGCGGTCGAAGA
CCTGATTTCAGGGCCAAAGACCTGAATTAACGGTCACAACAAACAGAGCT
GATGGCGTATACATAGTAACTAAACTTGAAAGAGTCCGTATAGGAGCGTG
AATCCTCGTTTGGTTCAGGTTGTCAAAGGTGTTTTAACAATAAGTGCGTT
ATTTATACCTCATACGTTAGGCTGTTACTCTAGCGAAGAGGATTCTTATA
GGAAGTATAGAGGTCTGCGAACCAAACTTCTCTATCTCTCTTCTTTTCAT
TACAGGACGTACTGCTGGCCAGAGTTCAAAACAATTTGTATACGAATATC
TTAAAGATCAACCAATTTGGTACTAAATTCTATTTTGACAAGCAGCATGT
TTTGTTTAAGCAGTTGGAAGTTCTTATTTGAAAACTTTGAAACTAGACCG
CTGGTTGAATGTACTTTAATTCTTTTGATGTTTTATGACTTGAAACTGCT
CAGGAAAAATTATCATTCTTAATTCAATTTTGTCGAGTAAGAAATCAACT
AGAAATGTATTCCTTAGGATGTGATATTTTTGTTAATTGAAAATTTCTAT
CTTTGTTTTTCAAGGAAATCACTTCGTTTCTGGGATTCAGCCTTTTTGAT
GGCAATTCACGCTGATCGAACTAAGAGAATTGGAGCCATGTCGTAAGTAG
AGTCTGTAGGCCGGTTGGAGGACGGCTTGGTATACAGGCCAATAACCTGT
TATTGTTTTTTTGTTTTGATATATTTTTAGAGTTTGAGGGTGGAAGCAAA
AGAAGTAAAAGATTGTGACTTTCTTTGTTAGATTATTGTTTTTCAAGAGT
TAGCTGTCCTCTCTTGACGTACTGTTAAATTCAATAAAGTTTATAAAGTT
TATTCTTTCAGCCAAATTTTCTTCTTTGATAAACACTTTAGATTGTTTTA
GGCATTTACTGCTAAGGTGCCTTCAGCTTGGCCCATAAAGAATGTGAAAT
AGTATTGGTGTTATCAATTGTATGACTTTTGGGCAATTTGGGGGAAAAGC
CTATTTAACATTGCAAAAAATACAGGCCGATTTCAAATGAACAGGCAATT
AGTGATTTAATTGGCTCGCTGAGATCGGAACTTTTACCCCAAGTAAAAAT
CATCGTGGTATGATTATCCCATAAATCGTTAACCCTTACACTTTTGACCT
AATAAAATCTATCTGAAAAATTCTGCATCACTAAAAATAGACAAAAAGAA
CGACAAAAAAAAACGACAAATTTCATATTTTGCCGTCCACAACCCCGACC
GAATTGCAAGACGAATCTACTGTTAATTATGTCATTTAACTCAAATATTA
TTTACTTTTCATTTTAAGTGGTTGGAATACATGGGACCAACAACAGAAAG
ATGACTTTGAAATTGGTGAAGAAAATTCTGCTTTTGCACATCTAGCGTGA
GTTCATGTAAAAATTTTTTTAATGATGTACCTTATATGATTAAATACCAT
TTATAGTTTTACTTAAACAATCGTGATAGGTTCTCTGAATGGGCTTTTCC
AGAAATAGTCCGTGGCACCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGCCCCCCCCCCCC
CTGTTGAGGATATTGGATATCCAGGGGGTTAACGATTTTTGTTCACAAGT
TCACAAGTTTACTAATAAAGTAGGATATCCTGGAGGTTCGATAATTCGAA
AAATCAATATCCTCATACAGTGGGGTAAAACTTTTTTTCTGGAAAAGCCC
AATACACCTCTGTCTCTCTCAGTAACCCGGTGAAAATTTTAAAGAGGTTG
ATAAGAATAAAATGAAGTAGCCTGCTAAATTTCATTGGAGATTCACAAAA
ACGTTGTGAAATTAGAGTTCAATTGGGTTGAAATTTCGGGGTAGTTTTCT
TACCAAAGACGATTTTTCACAGGGTAGCGGACCTAGCAGGTCTAGGGTAT
GCCTCTTAACACTATATTGATCTAATCGTCTTTTGTCTCGATAGGTCATT
TCTTTACATGATGAATGCACTTGGCGTAGAGAAGAATGATCGAGAAATTT
TTCGCAACAAGATGAGCACCATAGGAAATCTAAGAGAAGGTAAGGGAAAA
TATTGAAATCAATTTTTTCGGTTGGGTTTGAGAAAATATGAAGTTGATGA
TTATATTCACGATATGAACCCCTGCTTCTTTCTGACAATACGTGATTTTA
TTTTTTGCAAGGGCTGATTATTTGCAATAGTAAAAGTTACATATTTTCGT
AGTACATATCATAAATTCATTACAGCTGAATTCCAGTTGACACAAACGTT
GTTTCAATATTCTTCTGATTCTTCTAATGCAATGATATATGAGCGCTACA
TTGTCTCCGTTTAACTCGTTTGAATTTTTGACTTAGCTTGTAGATTACGA
TTGTTCACCTCTGTCTCAGTGTCATAAAATAAAGAAACTACCTTTAACTG
AAGGAAATTTCAAAATGTTTTATTTATAGCACAACAATCTAGTGACGATT
TTTGAAATTTCTGTGTGTTTCCCAGAGGAAAACGGGAGCTTAGCGCTGTC
CTCCGAGGAATAGAATTTTTTTCTCACCAGGGAAGATTTTTGACAAATTT
TTAAGTTTAGAGGGGGGGATCTCACTAGGTCTGTTTAGTGATACAAGTAA
GAGTGTTCTTAAAAAGATGGATCTTATGAAAACTTTGTTTTGTTTTTCAG
AGCAAATCAGAGAGCTGGAAGAGAGTATCGAAATATTACAATGAAACATA
AATCGAAATGGTTCATGATAATTGGTAACTATTTTTATGTAAATATGATA
ATATTTTGACAAAGTTCTATTTTTTATAATTATAGGGAAAAGAAAAATAA
AGAATTATTTATTTTGATATTTGGGTAAAAATTTGCAGTTTTTATTTTTT
GTAGGAATCACACTAGAATAGGAAATTTTTCTTCGATGGTAGGTTTATG

Coding sequence (CDS) from alignment at scaffold_362:929858..937456-

>TCONS_00062286 ID=TCONS_00062286|Name=TCONS_00062286|organism=Clytia hemisphaerica|type=CDS|length=6858bp|location=Sequence derived from alignment at scaffold_362:929858..937456- (Clytia hemisphaerica)
AGCAAATCAGAGAGCTGGAAGAGAGTATCGAAATATTACAATGAGTCATT
TCTTTACATGATGAATGCACTTGGCGTAGAGAAGAATGATCGAGAAATTT
TTCGCAACAAGATGAGCACCATAGGAAATCTAAGAGAAGTGGTTGGAATA
CATGGGACCAACAACAGAAAGATGACTTTGAAATTGGTGAAGAAAATTCT
GCTTTTGCACATCTAGCGAAATCACTTCGTTTCTGGGATTCAGCCTTTTT
GATGGCAATTCACGCTGATCGAACTAAGAGAATTGGAGCCATGTCGACGT
ACTGCTGGCCAGAGTTCAAAACAATTTGTATACGAATATCTTAAAGATCA
ACCAATTTGATGTAATGTAGCAGATGACTTTGCACCAGCCACCACACTGA
TGAATATGTGTTTCACTTATAATTTCACCTCCACAAACGCTATCGTGGTT
ATTCGACACAAGAAGACAAAGCGAAGTTTGGATTATTAGTCCAACACCAA
GAAGGACGTTCATGGTTCGCTAAATTTGTTGATGGTCAACGAGTCAAATC
AAAAGAAGTAACCGAATTTGCATTTTATCGATTGGTGCAATATTTTGCTG
TTTGCCTATTTGAATTTCGAGATCAACTATGATGCAGAGACGGAAGAATT
CGATATGGAGTGTAAAAAGTTCATGAATGAGTTTGTTGGTCACATTTTCG
AAGCAGAATGGCAACAGTTGGAATCAGACCGTCATCTCAAGGACAAGCAA
TAAATTTGAAAGAGCAAATCAGAGAGCTGGAAGAGAGTATCGAAATATTA
CAATGAGTCATTTCTTTACATGATGAATGCACTTGGCGTAGAGAAGAATG
ATCGAGAAATTTTTCGCAACAAGATGAGCACCATAGGAAATCTAAGAGAA
GTGGTTGGAATACATGGGACCAACAACAGAAAGATGACTTTGAAATTGGT
GAAGAAAATTCTGCTTTTGCACATCTAGCGAAATCACTTCGTTTCTGGGA
TTCAGCCTTTTTGATGGCAATTCACGCTGATCGAACTAAGAGAATTGGAG
CCATGTCGACGTACTGCTGGCCAGAGTTCAAAACAATTTGTATACGAATA
TCTTAAAGATCAACCAATTTGATGTAATGTAGCAGATGACTTTGCACCAG
CCACCACACTGATGAATATGTGTTTCACTTATAATTTCACCTCCACAAAC
GCTATCGTGGTTATTCGACACAAGAAGACAAAGCGAAGTTTGGATTATTA
GTCCAACACCAAGAAGGACGTTCATGGTTCGCTAAATTTGTTGATGGTCA
ACGAGTCAAATCAAAAGAAGTAACCGAATTTGCATTTTATCGATTGGTGC
AATATTTTGCTGTTTGCCTATTTGAATTTCGAGATCAACTATGATGCAGA
GACGGAAGAATTCGATATGGAGTGTAAAAAGTTCATGAATGAGTTTGTTG
GTCACATTTTCGAAGCAGAATGGCAACAGTTGGAATCAGACCGTCATCTC
AAGGACAAGCAATAAATTTGAAAGAGCAAATCAGAGAGCTGGAAGAGAGT
ATCGAAATATTACAATGAGTCATTTCTTTACATGATGAATGCACTTGGCG
TAGAGAAGAATGATCGAGAAATTTTTCGCAACAAGATGAGCACCATAGGA
AATCTAAGAGAAGTGGTTGGAATACATGGGACCAACAACAGAAAGATGAC
TTTGAAATTGGTGAAGAAAATTCTGCTTTTGCACATCTAGCGAAATCACT
TCGTTTCTGGGATTCAGCCTTTTTGATGGCAATTCACGCTGATCGAACTA
AGAGAATTGGAGCCATGTCGACGTACTGCTGGCCAGAGTTCAAAACAATT
TGTATACGAATATCTTAAAGATCAACCAATTTGATGTAATGTAGCAGATG
ACTTTGCACCAGCCACCACACTGATGAATATGTGTTTCACTTATAATTTC
ACCTCCACAAACGCTATCGTGGTTATTCGACACAAGAAGACAAAGCGAAG
TTTGGATTATTAGTCCAACACCAAGAAGGACGTTCATGGTTCGCTAAATT
TGTTGATGGTCAACGAGTCAAATCAAAAGAAGTAACCGAATTTGCATTTT
ATCGATTGGTGCAATATTTTGCTGTTTGCCTATTTGAATTTCGAGATCAA
CTATGATGCAGAGACGGAAGAATTCGATATGGAGTGTAAAAAGTTCATGA
ATGAGTTTGTTGGTCACATTTTCGAAGCAGAATGGCAACAGTTGGAATCA
GACCGTCATCTCAAGGACAAGCAATAAATTTGAAAGAGCAAATCAGAGAG
CTGGAAGAGAGTATCGAAATATTACAATGAGTCATTTCTTTACATGATGA
ATGCACTTGGCGTAGAGAAGAATGATCGAGAAATTTTTCGCAACAAGATG
AGCACCATAGGAAATCTAAGAGAAGTGGTTGGAATACATGGGACCAACAA
CAGAAAGATGACTTTGAAATTGGTGAAGAAAATTCTGCTTTTGCACATCT
AGCGAAATCACTTCGTTTCTGGGATTCAGCCTTTTTGATGGCAATTCACG
CTGATCGAACTAAGAGAATTGGAGCCATGTCGACGTACTGCTGGCCAGAG
TTCAAAACAATTTGTATACGAATATCTTAAAGATCAACCAATTTGATGTA
ATGTAGCAGATGACTTTGCACCAGCCACCACACTGATGAATATGTGTTTC
ACTTATAATTTCACCTCCACAAACGCTATCGTGGTTATTCGACACAAGAA
GACAAAGCGAAGTTTGGATTATTAGTCCAACACCAAGAAGGACGTTCATG
GTTCGCTAAATTTGTTGATGGTCAACGAGTCAAATCAAAAGAAGTAACCG
AATTTGCATTTTATCGATTGGTGCAATATTTTGCTGTTTGCCTATTTGAA
TTTCGAGATCAACTATGATGCAGAGACGGAAGAATTCGATATGGAGTGTA
AAAAGTTCATGAATGAGTTTGTTGGTCACATTTTCGAAGCAGAATGGCAA
CAGTTGGAATCAGACCGTCATCTCAAGGACAAGCAATAAATTTGAAAGAG
CAAATCAGAGAGCTGGAAGAGAGTATCGAAATATTACAATGAGTCATTTC
TTTACATGATGAATGCACTTGGCGTAGAGAAGAATGATCGAGAAATTTTT
CGCAACAAGATGAGCACCATAGGAAATCTAAGAGAAGTGGTTGGAATACA
TGGGACCAACAACAGAAAGATGACTTTGAAATTGGTGAAGAAAATTCTGC
TTTTGCACATCTAGCGAAATCACTTCGTTTCTGGGATTCAGCCTTTTTGA
TGGCAATTCACGCTGATCGAACTAAGAGAATTGGAGCCATGTCGACGTAC
TGCTGGCCAGAGTTCAAAACAATTTGTATACGAATATCTTAAAGATCAAC
CAATTTGATGTAATGTAGCAGATGACTTTGCACCAGCCACCACACTGATG
AATATGTGTTTCACTTATAATTTCACCTCCACAAACGCTATCGTGGTTAT
TCGACACAAGAAGACAAAGCGAAGTTTGGATTATTAGTCCAACACCAAGA
AGGACGTTCATGGTTCGCTAAATTTGTTGATGGTCAACGAGTCAAATCAA
AAGAAGTAACCGAATTTGCATTTTATCGATTGGTGCAATATTTTGCTGTT
TGCCTATTTGAATTTCGAGATCAACTATGATGCAGAGACGGAAGAATTCG
ATATGGAGTGTAAAAAGTTCATGAATGAGTTTGTTGGTCACATTTTCGAA
GCAGAATGGCAACAGTTGGAATCAGACCGTCATCTCAAGGACAAGCAATA
AATTTGAAAGAGCAAATCAGAGAGCTGGAAGAGAGTATCGAAATATTACA
ATGAGTCATTTCTTTACATGATGAATGCACTTGGCGTAGAGAAGAATGAT
CGAGAAATTTTTCGCAACAAGATGAGCACCATAGGAAATCTAAGAGAAGT
GGTTGGAATACATGGGACCAACAACAGAAAGATGACTTTGAAATTGGTGA
AGAAAATTCTGCTTTTGCACATCTAGCGAAATCACTTCGTTTCTGGGATT
CAGCCTTTTTGATGGCAATTCACGCTGATCGAACTAAGAGAATTGGAGCC
ATGTCGACGTACTGCTGGCCAGAGTTCAAAACAATTTGTATACGAATATC
TTAAAGATCAACCAATTTGATGTAATGTAGCAGATGACTTTGCACCAGCC
ACCACACTGATGAATATGTGTTTCACTTATAATTTCACCTCCACAAACGC
TATCGTGGTTATTCGACACAAGAAGACAAAGCGAAGTTTGGATTATTAGT
CCAACACCAAGAAGGACGTTCATGGTTCGCTAAATTTGTTGATGGTCAAC
GAGTCAAATCAAAAGAAGTAACCGAATTTGCATTTTATCGATTGGTGCAA
TATTTTGCTGTTTGCCTATTTGAATTTCGAGATCAACTATGATGCAGAGA
CGGAAGAATTCGATATGGAGTGTAAAAAGTTCATGAATGAGTTTGTTGGT
CACATTTTCGAAGCAGAATGGCAACAGTTGGAATCAGACCGTCATCTCAA
GGACAAGCAATAAATTTGAAAGAGCAAATCAGAGAGCTGGAAGAGAGTAT
CGAAATATTACAATGAGTCATTTCTTTACATGATGAATGCACTTGGCGTA
GAGAAGAATGATCGAGAAATTTTTCGCAACAAGATGAGCACCATAGGAAA
TCTAAGAGAAGTGGTTGGAATACATGGGACCAACAACAGAAAGATGACTT
TGAAATTGGTGAAGAAAATTCTGCTTTTGCACATCTAGCGAAATCACTTC
GTTTCTGGGATTCAGCCTTTTTGATGGCAATTCACGCTGATCGAACTAAG
AGAATTGGAGCCATGTCGACGTACTGCTGGCCAGAGTTCAAAACAATTTG
TATACGAATATCTTAAAGATCAACCAATTTGATGTAATGTAGCAGATGAC
TTTGCACCAGCCACCACACTGATGAATATGTGTTTCACTTATAATTTCAC
CTCCACAAACGCTATCGTGGTTATTCGACACAAGAAGACAAAGCGAAGTT
TGGATTATTAGTCCAACACCAAGAAGGACGTTCATGGTTCGCTAAATTTG
TTGATGGTCAACGAGTCAAATCAAAAGAAGTAACCGAATTTGCATTTTAT
CGATTGGTGCAATATTTTGCTGTTTGCCTATTTGAATTTCGAGATCAACT
ATGATGCAGAGACGGAAGAATTCGATATGGAGTGTAAAAAGTTCATGAAT
GAGTTTGTTGGTCACATTTTCGAAGCAGAATGGCAACAGTTGGAATCAGA
CCGTCATCTCAAGGACAAGCAATAAATTTGAAAGAGCAAATCAGAGAGCT
GGAAGAGAGTATCGAAATATTACAATGAGTCATTTCTTTACATGATGAAT
GCACTTGGCGTAGAGAAGAATGATCGAGAAATTTTTCGCAACAAGATGAG
CACCATAGGAAATCTAAGAGAAGTGGTTGGAATACATGGGACCAACAACA
GAAAGATGACTTTGAAATTGGTGAAGAAAATTCTGCTTTTGCACATCTAG
CGAAATCACTTCGTTTCTGGGATTCAGCCTTTTTGATGGCAATTCACGCT
GATCGAACTAAGAGAATTGGAGCCATGTCGACGTACTGCTGGCCAGAGTT
CAAAACAATTTGTATACGAATATCTTAAAGATCAACCAATTTGATGTAAT
GTAGCAGATGACTTTGCACCAGCCACCACACTGATGAATATGTGTTTCAC
TTATAATTTCACCTCCACAAACGCTATCGTGGTTATTCGACACAAGAAGA
CAAAGCGAAGTTTGGATTATTAGTCCAACACCAAGAAGGACGTTCATGGT
TCGCTAAATTTGTTGATGGTCAACGAGTCAAATCAAAAGAAGTAACCGAA
TTTGCATTTTATCGATTGGTGCAATATTTTGCTGTTTGCCTATTTGAATT
TCGAGATCAACTATGATGCAGAGACGGAAGAATTCGATATGGAGTGTAAA
AAGTTCATGAATGAGTTTGTTGGTCACATTTTCGAAGCAGAATGGCAACA
GTTGGAATCAGACCGTCATCTCAAGGACAAGCAATAAATTTGAAAGAGCA
AATCAGAGAGCTGGAAGAGAGTATCGAAATATTACAATGAGTCATTTCTT
TACATGATGAATGCACTTGGCGTAGAGAAGAATGATCGAGAAATTTTTCG
CAACAAGATGAGCACCATAGGAAATCTAAGAGAAGTGGTTGGAATACATG
GGACCAACAACAGAAAGATGACTTTGAAATTGGTGAAGAAAATTCTGCTT
TTGCACATCTAGCGAAATCACTTCGTTTCTGGGATTCAGCCTTTTTGATG
GCAATTCACGCTGATCGAACTAAGAGAATTGGAGCCATGTCGACGTACTG
CTGGCCAGAGTTCAAAACAATTTGTATACGAATATCTTAAAGATCAACCA
ATTTGATGTAATGTAGCAGATGACTTTGCACCAGCCACCACACTGATGAA
TATGTGTTTCACTTATAATTTCACCTCCACAAACGCTATCGTGGTTATTC
GACACAAGAAGACAAAGCGAAGTTTGGATTATTAGTCCAACACCAAGAAG
GACGTTCATGGTTCGCTAAATTTGTTGATGGTCAACGAGTCAAATCAAAA
GAAGTAACCGAATTTGCATTTTATCGATTGGTGCAATATTTTGCTGTTTG
CCTATTTGAATTTCGAGATCAACTATGATGCAGAGACGGAAGAATTCGAT
ATGGAGTGTAAAAAGTTCATGAATGAGTTTGTTGGTCACATTTTCGAAGC
AGAATGGCAACAGTTGGAATCAGACCGTCATCTCAAGGACAAGCAATAAA
TTTGAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_039030XLOC_039030Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00062286-exon-scaffold_362-1575043694:937418..937456TCONS_00062286-exon-scaffold_362-1575043694:937418..937456Clytia hemisphaericaexon
TCONS_00062286-exon-scaffold_362-1575043694:937158..937233TCONS_00062286-exon-scaffold_362-1575043694:937158..937233Clytia hemisphaericaexon
TCONS_00062286-exon-scaffold_362-1575043694:934668..934761TCONS_00062286-exon-scaffold_362-1575043694:934668..934761Clytia hemisphaericaexon
TCONS_00062286-exon-scaffold_362-1575043694:934055..934222TCONS_00062286-exon-scaffold_362-1575043694:934055..934222Clytia hemisphaericaexon
TCONS_00062286-exon-scaffold_362-1575043694:933270..933355TCONS_00062286-exon-scaffold_362-1575043694:933270..933355Clytia hemisphaericaexon
TCONS_00062286-exon-scaffold_362-1575043694:932588..932651TCONS_00062286-exon-scaffold_362-1575043694:932588..932651Clytia hemisphaericaexon
TCONS_00062286-exon-scaffold_362-1575043694:932265..932342TCONS_00062286-exon-scaffold_362-1575043694:932265..932342Clytia hemisphaericaexon
TCONS_00062286-exon-scaffold_362-1575043694:931511..931588TCONS_00062286-exon-scaffold_362-1575043694:931511..931588Clytia hemisphaericaexon
TCONS_00062286-exon-scaffold_362-1575043694:930718..930812TCONS_00062286-exon-scaffold_362-1575043694:930718..930812Clytia hemisphaericaexon
TCONS_00062286-exon-scaffold_362-1575043694:929858..930106TCONS_00062286-exon-scaffold_362-1575043694:929858..930106Clytia hemisphaericaexon
TCONS_00062286-exon-scaffold_362-1510915933:937418..937456TCONS_00062286-exon-scaffold_362-1510915933:937418..937456Clytia hemisphaericaexon
TCONS_00062286-exon-scaffold_362-1510915933:937158..937233TCONS_00062286-exon-scaffold_362-1510915933:937158..937233Clytia hemisphaericaexon
TCONS_00062286-exon-scaffold_362-1510915933:934668..934761TCONS_00062286-exon-scaffold_362-1510915933:934668..934761Clytia hemisphaericaexon
TCONS_00062286-exon-scaffold_362-1510915933:934055..934222TCONS_00062286-exon-scaffold_362-1510915933:934055..934222Clytia hemisphaericaexon
TCONS_00062286-exon-scaffold_362-1510915933:933270..933355TCONS_00062286-exon-scaffold_362-1510915933:933270..933355Clytia hemisphaericaexon
TCONS_00062286-exon-scaffold_362-1510915933:932588..932651TCONS_00062286-exon-scaffold_362-1510915933:932588..932651Clytia hemisphaericaexon
TCONS_00062286-exon-scaffold_362-1510915933:932265..932342TCONS_00062286-exon-scaffold_362-1510915933:932265..932342Clytia hemisphaericaexon
TCONS_00062286-exon-scaffold_362-1510915933:931511..931588TCONS_00062286-exon-scaffold_362-1510915933:931511..931588Clytia hemisphaericaexon
TCONS_00062286-exon-scaffold_362-1510915933:930718..930812TCONS_00062286-exon-scaffold_362-1510915933:930718..930812Clytia hemisphaericaexon
TCONS_00062286-exon-scaffold_362-1510915933:929858..930106TCONS_00062286-exon-scaffold_362-1510915933:929858..930106Clytia hemisphaericaexon
TCONS_00062286-exon-scaffold_362-1491911889:937418..937456TCONS_00062286-exon-scaffold_362-1491911889:937418..937456Clytia hemisphaericaexon
TCONS_00062286-exon-scaffold_362-1491911889:937158..937233TCONS_00062286-exon-scaffold_362-1491911889:937158..937233Clytia hemisphaericaexon
TCONS_00062286-exon-scaffold_362-1491911889:934668..934761TCONS_00062286-exon-scaffold_362-1491911889:934668..934761Clytia hemisphaericaexon
TCONS_00062286-exon-scaffold_362-1491911889:934055..934222TCONS_00062286-exon-scaffold_362-1491911889:934055..934222Clytia hemisphaericaexon
TCONS_00062286-exon-scaffold_362-1491911889:933270..933355TCONS_00062286-exon-scaffold_362-1491911889:933270..933355Clytia hemisphaericaexon
TCONS_00062286-exon-scaffold_362-1491911889:932588..932651TCONS_00062286-exon-scaffold_362-1491911889:932588..932651Clytia hemisphaericaexon
TCONS_00062286-exon-scaffold_362-1491911889:932265..932342TCONS_00062286-exon-scaffold_362-1491911889:932265..932342Clytia hemisphaericaexon
TCONS_00062286-exon-scaffold_362-1491911889:931511..931588TCONS_00062286-exon-scaffold_362-1491911889:931511..931588Clytia hemisphaericaexon
TCONS_00062286-exon-scaffold_362-1491911889:930718..930812TCONS_00062286-exon-scaffold_362-1491911889:930718..930812Clytia hemisphaericaexon
TCONS_00062286-exon-scaffold_362-1491911889:929858..930106TCONS_00062286-exon-scaffold_362-1491911889:929858..930106Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00062286-proteinTCONS_00062286-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_362supercontigscaffold_362:929858..937456 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
54.818	50.364	40.8821	29.9247	1.26329e-06	8.04174e-05	0.0340725	0.00319348	19.5076	17.0186	14.2447	13.3841	13.9538	12.4646	13.7761	14.2834	18.1935	19.9759	20.8157	25.5774	11.3874	12.0824	14.648	20	6.22625e-09	2.25913e-08	19.9827	8.76918	18.4668	13.8842
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR022096SBF1/SBF2
Blast
[Close]
BLAST of TCONS_00062286 vs. Swiss-Prot (Human)
Match: K0513 (Uncharacterized protein KIAA0513 OS=Homo sapiens GN=KIAA0513 PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.337e-22
Identity = 50/100 (50.00%), Postives = 62/100 (62.00%), Query Frame = 1 
Query:  145 EEFDMECKKFMNEFVGHIFEADGYSTQEDKAKFG--LLVQHQEGRSWFAKFVDGQRVKSKEVTEFAFYRLVQYFAVCLFECNVADDFAPATTLMNMCFTY 438
            +E  +  + FM  +V  IF       QE+KAKFG     ++ +GR WFA++V  QR  SK V+E  FYRLVQ FAV LFEC+  DDF PA  LM MCFTY
Sbjct:   89 DEETLALRDFMRGYVEKIFSGGEDLDQEEKAKFGEYCSSENGKGREWFARYVSAQRCNSKCVSEATFYRLVQSFAVVLFECHQMDDFGPAKNLMTMCFTY 188
The following BLAST results are available for this feature:
BLAST of TCONS_00062286 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
K05131.337e-2250.00Uncharacterized protein KIAA0513 OS=Homo sapiens G... [more]
back to top