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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00062273 ID=TCONS_00062273|Name=TCONS_00062273|organism=Clytia hemisphaerica|type=transcript|length=1639bp
GGAAAGTTTGATCGACCTGAACAAACCACAAGACTTATCACACGTGAAAG
CCATTTTCTTTGATGAGTGGAATTATGATTACGATGTTGAGGAGGACGAC
AGTGATTCAGATCTATCGGGGGATGATACCGATAAGAATGAACCGTTAAA
AAGCCGATTGATTAATGAAATCCCGATTTGTTGGGTGGCACCAAACAGCT
CAAATCGTAATCGAGCCTTTGGTAATCAGTGGAAAAAATTCACCGTTGTT
AATTTGAATCTAAACCTTAGAAACACGAAGGAAATATCTAATAAAGCTTT
CGTTGTTGCCGAGCAAGATCTTTTTGAATACGCAAACGGTCTATCAAAGC
CACCTCAGAATTTTCCGAATGGTTGTAGACCAACTTGCGTTTCATCCCTT
GATGAGGCCTTGGTTCTAGCTCGTAATTTGGAGACGAAAAAAGGTATTCT
TCTTGTGTCAGATAGCGAACAAATCAACCTCAACACAAAAGAGAAAGTGA
AATATCACCATGAGTACAAACTTGACTTTTCATTTCCGGAAAACCCAATT
GACTTTTTAAATGAAGGAAATATACTTGTAACGTCACGAAATTACTTATC
AGGCTTCGAATGGCCGGTTGTCATTTACCAGCTTAATGAAAATGATGAGG
GAGATATAGAACGCCACGAATGTAACATCATATCGAGATGCACCTCCTTG
CTGATTATTGTAGGAAAAGAAACTTCTACACActtaaataattttccttt
tgccGAAATTGCTTCATTATTAGAGGTTTTAACTTCTGATACAAGCACTC
TTAGTGATTTTAAAAAGCTAGCGAGGAACTACGTCATGGATCACCTGAGC
CGTTACAAACGACGCAGATGGCTTCATGATCTTCAACCAATTTTGAAAAG
GGCAATCGAACAGATATCACAAACCTCAAATGTAACCATTACATTCTCAA
TGCTAGAAGATCTTTTTCGATTCTTGCTAAAAGACCTtttgaatgaaaag
aacaaatcATGGCTGTCTTTACCGTGCGTGATCGGTAACATTTTTGCCGA
TTTTGATTTCGGTAAACTTGAAAGCTATCTGACAATTGACAACATTCTCA
AACTTTACACCGAATttagatttgaaaaaatgtcCACACAGCTAAAAGAG
GAATTCTGGAAACATTGTGCTTACACGGGTTTTGATATCGAAGAATTACC
AGAACAAATGAAATTGAGTTTCTGGGAACATTTTGAAATCGACATCTTAC
CGCAGGGACTAGGAACAGAACCTAGGTTAGCAGttttaaaagtttcgaaa
aatgaCAGTATCATTTCAAagcaattcaaattttatgtTGGTAAATACAT
CATCAGCCGCTCATTGTACCATCCCATTCGAtaccgtattattattattg
aaaATTATAATCGACGCGAGACTTGGCTGCAAGACGTTTTACCCATTTTG
GAAAAGACAATTGAAAATATCTTGCAAGCTTCCAACGAAACAATAACTTT
TTCAATGCTAGAAGAACTTTTTAAAGCCTTGCTAAAAGACGTTGCTCAAA
CATATAATCGTTCTTATCACGAGAGTAACGCTTTAAAAACTCTGTCTGAT
GGATTCGATAAAACGGTTAACGTTAATGGCAAATTTTCC Run BLAST on NCBI transcript from alignment at scaffold_362:781331..782969- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00062273 ID=TCONS_00062273|Name=TCONS_00062273|organism=Clytia hemisphaerica|type=transcript|length=1639bp|location=Sequence derived from alignment at scaffold_362:781331..782969- (Clytia hemisphaerica)
GGAAAGTTTGATCGACCTGAACAAACCACAAGACTTATCACACGTGAAAG
CCATTTTCTTTGATGAGTGGAATTATGATTACGATGTTGAGGAGGACGAC
AGTGATTCAGATCTATCGGGGGATGATACCGATAAGAATGAACCGTTAAA
AAGCCGATTGATTAATGAAATCCCGATTTGTTGGGTGGCACCAAACAGCT
CAAATCGTAATCGAGCCTTTGGTAATCAGTGGAAAAAATTCACCGTTGTT
AATTTGAATCTAAACCTTAGAAACACGAAGGAAATATCTAATAAAGCTTT
CGTTGTTGCCGAGCAAGATCTTTTTGAATACGCAAACGGTCTATCAAAGC
CACCTCAGAATTTTCCGAATGGTTGTAGACCAACTTGCGTTTCATCCCTT
GATGAGGCCTTGGTTCTAGCTCGTAATTTGGAGACGAAAAAAGGTATTCT
TCTTGTGTCAGATAGCGAACAAATCAACCTCAACACAAAAGAGAAAGTGA
AATATCACCATGAGTACAAACTTGACTTTTCATTTCCGGAAAACCCAATT
GACTTTTTAAATGAAGGAAATATACTTGTAACGTCACGAAATTACTTATC
AGGCTTCGAATGGCCGGTTGTCATTTACCAGCTTAATGAAAATGATGAGG
GAGATATAGAACGCCACGAATGTAACATCATATCGAGATGCACCTCCTTG
CTGATTATTGTAGGAAAAGAAACTTCTACACACTTAAATAATTTTCCTTT
TGCCGAAATTGCTTCATTATTAGAGGTTTTAACTTCTGATACAAGCACTC
TTAGTGATTTTAAAAAGCTAGCGAGGAACTACGTCATGGATCACCTGAGC
CGTTACAAACGACGCAGATGGCTTCATGATCTTCAACCAATTTTGAAAAG
GGCAATCGAACAGATATCACAAACCTCAAATGTAACCATTACATTCTCAA
TGCTAGAAGATCTTTTTCGATTCTTGCTAAAAGACCTTTTGAATGAAAAG
AACAAATCATGGCTGTCTTTACCGTGCGTGATCGGTAACATTTTTGCCGA
TTTTGATTTCGGTAAACTTGAAAGCTATCTGACAATTGACAACATTCTCA
AACTTTACACCGAATTTAGATTTGAAAAAATGTCCACACAGCTAAAAGAG
GAATTCTGGAAACATTGTGCTTACACGGGTTTTGATATCGAAGAATTACC
AGAACAAATGAAATTGAGTTTCTGGGAACATTTTGAAATCGACATCTTAC
CGCAGGGACTAGGAACAGAACCTAGGTTAGCAGTTTTAAAAGTTTCGAAA
AATGACAGTATCATTTCAAAGCAATTCAAATTTTATGTTGGTAAATACAT
CATCAGCCGCTCATTGTACCATCCCATTCGATACCGTATTATTATTATTG
AAAATTATAATCGACGCGAGACTTGGCTGCAAGACGTTTTACCCATTTTG
GAAAAGACAATTGAAAATATCTTGCAAGCTTCCAACGAAACAATAACTTT
TTCAATGCTAGAAGAACTTTTTAAAGCCTTGCTAAAAGACGTTGCTCAAA
CATATAATCGTTCTTATCACGAGAGTAACGCTTTAAAAACTCTGTCTGAT
GGATTCGATAAAACGGTTAACGTTAATGGCAAATTTTCC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00062273-exon-scaffold_362-1575043694:781331..782969 | TCONS_00062273-exon-scaffold_362-1575043694:781331..782969 | Clytia hemisphaerica | exon |
| TCONS_00062273-exon-scaffold_362-1510915933:781331..782969 | TCONS_00062273-exon-scaffold_362-1510915933:781331..782969 | Clytia hemisphaerica | exon |
| TCONS_00062273-exon-scaffold_362-1491911889:781331..782969 | TCONS_00062273-exon-scaffold_362-1491911889:781331..782969 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_362 | supercontig | scaffold_362:781331..782969 - |
Blast
The following BLAST results are available for this feature:
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