TCONS_00062240 (transcript) - C. hemisphaerica

Overview
NameTCONS_00062240
Unique NameTCONS_00062240
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1450

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00062240 ID=TCONS_00062240|Name=TCONS_00062240|organism=Clytia hemisphaerica|type=transcript|length=1450bp
TTCagagattttaaaaatataataaaatttaGTAAAGACACAAAACACTA
AAAAGGTGAAAGAAGAACGGAAGAAAATGATGGCAACATACAGTTCATCA
AGTTCATGTGATGATATTCTTCATGATGAAGTTTTTATGAAGACTTCATT
GAACCTGAATATCAAAGATGGTACAAGGAATTACTCAAAGAGCACAGACA
GTGGATCGGATCCAGACGACAGCAACAATAACAATACAATAATCACACAA
CAATCTGAACAAACCAAGAATACCAAACCACAAGGACAAATTCGCGCTGG
TCTACGTTCATTATACCTTGATAAACCAGTCCGTGTGAAGTTCGTCAACC
ACTCGGGAAAAGAGGTTCAGTTATATTGGATCAACTTTGTCGGtgaatgt
gaaaaagctttcaaaattttagatgGTAAATCTGAAGTCGTTGACACATT
CGAAACTCATCCTTGGATTGCAGCAAATGCCAGAAATAAGAAGGTCTCAC
ACGCCTTTACCATCGGAAATAATTTGGTTTATTACCCTTTGATGGGACCG
AATGGAGGCAAATATGCAGTCGCTGAAATTCGAAAAGCACCAGAAAAACT
AGCAGATTTAATATCGCGACCAAATGGTACAGAAGTCTTGGTAAAATTTA
TAAACAGAACGTCGAGACCAGCTTATCTTGAAATGGTCAATCCAGAAGGC
GATAGAGAATTGAAACACACGTTAGAAGCAGGACAAAGTTGGACGACGTG
TACACAAGAAAAGACGTTCTGGATCACCACTATGGATCAAGAAACGGACG
AAGGACTCTTACTGAACTACGGATGGTATTATTCACCTGTCAAAACCAGA
ATGAAGAAAGAACGGTGCTATATCACTGATTATATATAAGGAGTGGGCCA
GCAGCGAAGAGACGTAGATACTAACAACAACACAGCACATACGTAAAATT
TATCCATTGAGAATAGCAAAAGAGAGAGGATGGAGAGAGAACTTGTGTCT
AACAAAAAGATGAAACTCCTCACAGCAAGGTCAACAACCATGATGAATGG
ATACTTTGTATAGCTGGAGTGAAAATTCACCagaaaaaagcttcaaaata
gTTAGAAACATCTAAAGGAAAAACTATTAAGTGACATCACGAGCATCCAA
AAACAAAGCTCATGGTTCAATAGTCAAAATActaataaattttgaaagtc
aacaaaatccaaatttttattataaaaccGTAATATTATTTAAAAGATAT
CAAATATTATACGTAACGATTTTCTGCAGGTTTTATCAGGAAACTGTGTT
ACGATATTTATTTAAAACATCGTTACTACAATACTTTTTGGAAGCAATCa
tcattttgtaaattttttctatatttttttgatagttgcttttcttaaaa
aaaaaagaaaaatttgtatttttctttcctATTAAGAATCGGGAAATAAA
Run BLAST on NCBI

transcript from alignment at scaffold_362:244122..260879-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00062240 ID=TCONS_00062240|Name=TCONS_00062240|organism=Clytia hemisphaerica|type=transcript|length=16758bp|location=Sequence derived from alignment at scaffold_362:244122..260879- (Clytia hemisphaerica)
TTCAGAGATTTTAAAAATATAATAAAATTTAGTAAAGACACAAAACACTA
AAAAGGTGAAAGAAGAACGGAAGAAAATGATGGCAACATACAGTTCATCA
AGTTCATGTGATGATATTCTTCATGATGAAGTTTTTATGAAGGTGAGTAA
AGCCAGGGATCTTATTTTTATTTTTTACTTTTTCAGTAAACACAGATTAG
CATAATTTGATGATTTACGTCGTACCTGATTAACGTCAATAAATGTCCAT
CAATGGCAAAAATGGGTCAAAAAATTTAGAATTTTTTTCTAAGATTGTCG
GTCATATTTCTTAATTTGCCTGCCTTTCGTTATTTTCTGCTAAGAATTGC
CGATTTTCAGTCAAAAGGAGACATTTTGGCCTCAAACTGAACGGTGGGCG
TGAAGAGTCCAAAGGTAGAGGCGCAGTTTTCTAAATGCTCGTAATATACT
GTACTTAACGATTTCATTAACATTCAATCCGATGATTGGTTAAAGTACAA
TGCCTTAGTGGAACGGAATAGCGTTTGATATAACTTTCCGTCAGGTTCTT
TTAAAAAATCGCTTGAAGAATCGCAAAATTTATCAAAAGGTGAACATTGA
ATTTGCTTACCAGGAATCACTCAGCCTAGTAAGCTTTTTCCCTATGTTGG
TTCTTTGTGTTAAATAGACAAATACAAATGGAGAGAGATTTTAAAAATAT
TATTTTGATTTAAAATAATTGGATATTCCCTAATTCCCCTTGACTCTCAA
GCTTGGAACAAAAACGGATTTATTTTACAGAATCAGCAAAGATTTGAAAC
AAAGTTTACTATGAAAACGTTTGAATAAAAACACACAACCTCAACGAAGG
AGACATGTAAACTGTTACACCAAAGCTAAATAAGGTTTAAAGCAGGTTCT
CCTCCGCTGTTAAACTTGATCAGTTTTTTTTCTAAATGAAGTCATTAAGC
CCTAAAAATAACATATCACTAATCAAGTAGGATTGGGACCAAATTAAGAC
AAATGTTTTGAAATCAAATACAATGGACTTTTCCATCGTAATTTTACTAA
GATGAAACACAACTTTTTGGGTAAGTCAAACCCTTCTCAGAGTTTGGATT
AGAAAATTTCAGCAAGTATTTTGAAAGACTTTTCGTGAAAATGGAGCCAC
ATGAGGTAAGAGTATTAAACTTAAATCTGTTTACATTCTACGCAAAAAAA
CTTTGCAGTTTTTTCAAACAGATATCNTTTTGGATTTTCCCTATTGATTT
TAGCATGTTTAAGTATTTGAAATTTCGTTCAAATAGATATCTTTCTTCAA
TTGGCTAGGCTTGAATTTTCAAACACAATAAGTGAAAACAACTGAAGCGA
TTTCGGGAACGAGAATTCGAGAGTTAAGTATTCGTTCGACTCCTTCCGAC
TGACAGTTTTGTAGTTTTTTGGAACTAAATTTGCAAAAAACGTTTTTATT
GCTAAACTATGTTGCTAGACATAGATAACCGAAATTTTGAAATATCTTGG
GCGATTGTAAAAGCTATCAAGCTACAAGACAAATAGGAAAAAGTGATTTT
CCAAAAGTGGCAAAGCACCGTATAACGTAAACAGACGGCAAGACGGGTAC
CCGTGTTTTTAATATCCTCTCGTTTAAAATCTTAATGGATATTATTGCAA
AGATTGTTTTGTCATCTGCTAAATCAAAGCAAAGCTGTACTTTGCATACA
GTGCAAATGCTTCAGTGGTCAAGACAAATCACAAAATCTAAGAATAAGCT
TCAAGCCGCAAGAAAATTACTCAACTAACTTGCTAGTCTGAATCGCAGAC
CTCTACAAAACCCGAGTTAGTATATATAAGGAGCACGAATCCGTTAGTGG
ATGTCAGCAGCCTACTAACTTGCTGTTTGAGGAAAGTTTGCAGCCGGTAG
ACTTGATCACCCGATGATAGTTTTGGAGGGCAATTTGTTCCATCAATTTT
CAAAAGGGGATCAAATCAAAGTCAATTTCTTAAATTGGGCTGAAATTGCA
GGGTATTTTACCATCAGGGATAAAATGTTTGCCGAATTTTTTTTAGTTGC
GGGGGTCCCACTGGTCCACTGTCTGTTAGCTATACTCTCATGTTTACAAT
GAAGCAATTTAAATTTTAAGCTTGGTATGAAAGCTCGACTGCACGCATTC
CCGAAATTGATTTTGATATAGGGGATGCGTATCGTTTATAAAATTCCCGT
CCGAGAGTTACCCCCGTCTTTACCGAACAGTGTGAGTGAACGTTACGCTT
TCTGAGTGTCTATACACGAAAAACGAAGGAGAATCATATCAGTTTTATGA
AATTTGTGTAGTGGTAATGAAACGCTATAAATTAAAACAGACGTTACTCT
CCAACGGGAATTTAATACACCATACGCATCCCCATCCCCTATATAAATAC
ATATCGGTGGGCATGCATGCAGCCAGTATGAGAACCAGAGCTCAGGCGTG
TGCAAGTAACCAAGGGTTCAAAATAATTTGTCATATAATCGTGGTTTTAA
AATAAGAGAGGGATCAAATTGACCATAGAGTTAACCAAAATGTTTTAAAG
TCAATTAAGATTTTTCAGTATCATGACTTTTGTCGGAATGCAGGCAAGAC
AGTGAAGTTACTTTAATCCGAAGCTCCATAACTCGAAATTTCCTTAACTT
TTACCGGGCCTCTTCGAGTTATGGACACTATAAATGTTTGAAAAAAAAAA
CAATCAACCAAAGCATACACCTGGTTGAACATTGCGTTGTATCTTTCCTA
TGTTATCTAACGGCAGGTTAAGAGATGACAGATTTTGTTAAGGAGCATTT
CAACTCCCGTACTTATTGACTAATATTTCTGCCTACGACAGAAATAGGTT
GGACAGTATTCTGAATAAAATATTTAAGAAGGAAATTAAGATTTATCACC
TTGCCCAAAACATTAATAACATTTCCAGCTAGACAAACGTAGAGACAAGA
ATGCTTACTAACTTCCTAATCAAGCCAAGAACGTAGGAGTCAAGTAGATA
CAAAGAATATATAGGAATGTAAAAATCGCAACAGATTTGTTTTCAAAGAA
AGATTTTTGACATTTTTTTCCGTGAGAATATTCATCTATTAAGAGGGTTA
AGACGGCATGCCATCACCAATATGAGACCATCTGTGAAAGTAGAAAGTAG
ATAATGATAAAGCAACATTCAAAAATGTGTTCCATTTAGTTTTATATAGA
TGATTACTTTTTTTTTATTTCAACAAAAATTTGTAATAATCTCAGTATCT
CAAAATTTCAATCCTTTCTGGTTATTTTGAAACCCATATAAGAGACACAA
TGACAGCTATTTTGTGTATTGTTAGAATCCTATAAGAAACATCTTTAGGT
GCGCACCCAACTGGATTTCGATATTTTGAATCTTTATAGTTCATTATGAG
TCCAACTAATACAACCAGATACAACTTATAATTTACAGAATGCTGAAATG
TAGTTGTGGTATAGTGGTTATCATCCTTGATTCCCGCCTGGGAGGCCCGA
GTTCGATGCCCACCGTGTCTCTACGATTCACTTAGCAAGTGAATATACCT
TCGCCCGGGTCAACCCATGCCATGTGATGAGAAATGGGTACCATTACTCT
GATACAAGAGTGTGGGTGGATTAGACAGACATTGTGACGTGCCGTGGCAC
TCATAAGGTACGGCCCATCCCGAATGCATTCGGAGGGCTTTTATATCTAT
CTGAAATGTTAAGAATGATATAAATTCAAAACGCTACATTTTTATCATTT
CATTTATATGAGGATCCCCACCATTATGTGTCATCATGATACACTCTTGG
TAGGACAAAGTATTTCAACACTGTCAAAACAAGAATTATCAATCCAAAGA
AAAAAGCCACCTTTCGTTCTGGTCGATAATCCTCTACTAATCTTCAATAG
AATGTTGGTATTGAAAGTTCTTTAACATGAACAGTAATAGAAACCAGCAA
TAAGACTTCCCAAGGCTCCTACATTGTATTTCTTATTTATAGGCTGACTG
TGAGAAATGTAATACAATTATACTAATAGTAAAGCTTTATAGTATACTAC
TGCTGCTGGACAATTTCATTTTGTTTTGATTTTTTTATCCTTGTTTTTTA
AAACAATTATCATTTTTGTGTTGGCGAAACATTTTGTTTCTATATATACT
AAAAGGATTTAAAACTGCAACTATAATTTCACCTCTGGAGAATCATCTGA
AAAAACAAGCAGGTCTAGAAAGACTCGATGTGGATGGATCCTTAGAGAAA
AACGAGTTTTGTTGGAGTTTGTATGTTTTACGAGAAGAAAGAGGTGGCGA
AAGATTTGATTGAAAATATGGTCACTGCAAAACGAATCGAGGTAATAAAA
TCGTCCCCGATGGTAAAGATGCCCTGAAATTATTCAGGGTATCTGGGTAT
CTATCCCCTGGGAAAGCGCTCTATCTATGACTTTATTCCCATTGGAAATT
GAATGGGAAAAATTGCACTCCGAGACCATCCACATGGATGCATTCGCGTT
AGTGACCTAAAAAATAGATTTTCTATCCCCATTGGCATCACCACTACTGA
GAAAAAAGTTTCTACAGGGCACTGAAACAGGGGTAAAATGAGCTTTACAG
TTGCGGATCTTACAGTGTAAGGGGATAGTAAAATCTATGATCTATGAAAA
AGGGCTTTGTTATCATAGCAATATTCCTATCATGAAAAACATGCTAGGTT
TAGAGTTAGGGTTGCCACTGACCTTTTTATATCCCTGGACCATGCTAAAT
CCGCCATCTTCAATCGGAGTTTCTTTGGTTGGTACCCGCAAAGAAGCCAT
TGTAGTGTTTGAAACTTTGCCTAACGACAAACGGCGCCACATCATTAGTG
TACAAGCAAAACTAGATCTAGCGCTCTCTCCGCGGGTACCAATTTCAAAA
AAATTACGATCATAATATTTTGCTTGGCCGGCATTGAGTAACTTGGTCCA
GGGATATATGAAGGTCAGTGGGGTTAACCCAGCCTATACTAAACGTCACC
CGCGTTTCTTCTGTGACGCAATTATCCCGTAAGGTGTTACATGGTTGTTA
GTGAGGTACTTGCTAAAGCTATCGCATCGTTCTACGATATTTTAACTGAT
GAAATAGATTAATCCTTTGAAATTCCTGGCACAGTGACAGTGTGAAACTA
AAGTAGAGCTTAATAAACATATTGAATACATACACGTTTTTTATCAATTT
TATCGCAGTTGTCTGAATTGCATACAGCGCTGTTTACTTTTTTTGTCTGA
AAATCAAGCATAAACCAATCTGTCTTTTTTGAACTGCCGTAACAATAGGT
TTATAGTTCTAGTGTTTGGAGATATTTCCATATAGTCTTTGCAAGTTTTC
TGTTTTTACTGGCGTGCAGTCAAAAATGTACAGTACTGTACAGCACTGGT
CATTATCAAAACCCTGGGCTGAAAATATATTGGCTATATCGCAGTTTCTT
AGAAATTTGGTATCGGCAGTACTGAAATTGAGTGTTGGAAACTAGTTTTG
ATAACAGTGGTAAAAAGCAATAGAGTAGTGTGCCAGCCTGTCAGTTCTTA
AATTTCAAAAATTGAGAAACTGTTTTCGGTGCTTATAAAGCTATAACCAG
GGCAAAGTAGTCCAAATTTTAATCGAACGTTATCTTCCAGCGTTGAATGG
AATGTAGGATGAAAAAACTTTAGCTTTCGATCGTCTTTGATCTTTGCCAC
AAATGCTGGATAAAATGTTTGATGGCTAAAAACCTTCATCTAACACGTTT
TTTTTCTTCTTTTTTGAAGTTTTGCATTGGCATAGAACCAGTCCAGCATT
TCATTCAACATTCGAAAAATAGCAGTTTCCCTGGTCTTAAGCGATGAGAG
GTAGTGAAATAAAGGCGATAGAAACATTTTAGAAACACGTGATTGATGTA
TTAGGGAGCTCATCTTAAATCAACCCCTAAAATCAAACGATCTTAAAGTA
AGTCAAACATTTCAACAGTAAACAAATCGATTGACCGATCGTTTGATACA
ACAATTAAGAGATCTTTGGATGACGAAACTTTTGTTTATTTTCCCGCCGG
TGATAATAAAATCCTATTTAACCATATAAGTAAAAAAAGTCTGCGGTTTT
AATCTTTAGTTGATGAAAGCAATTTACGGAATAAAACACTTTTAGCTACA
TGACCGACCTGAATTTAAACCTCTTGTAAAATCTCTAGAAAAATACTTTC
TTCAAATTCTCTACTTAACTCATAATCGAAGCATAGTTTCAGAAAGTAAG
CAATAAGATAGCTCAAAGGAATGCATAATTGTTACAGACGGTTACCCCAA
CAGACAAAAATGAATTTTTGAAGTTTTACAGGGATTGATGAACCAGTGGG
GATGAACCGACGAGATAATGAGGTACCAGACAATTAATTTAAGATTCAAT
TAATCAAGGAGGGAGAGAGAGATTGAATTTGTGATTTTGATCGAGAAAAT
GTCCTGAGAGTAAAATTAATACATTTAATTTCTGTTCAAACTGATACCAT
GGAAGTTGATGAGATGGGTTTCAAATAACAAAATGATGAGCATCCGAAGA
ATGCAAAACATCTGATTGCGTAAAAAGAATTCACATTTTTTGACCACTTC
AAAATTACTCAAAAATTCAAGGTCAGAGTTCGATGCTTTGTTTTATAATG
ATGACCGCTGAAATAATTTCATTCCTGGGAGTTGGTATGAGAGTGCTTTT
TCAGACTTTCTAAAGTTTCTCGATGTGTCGAAAAAAAAAGATGAAAAATT
AGTTGGGTATTTTTTGAAAAAGGAAAAATTAAATACTGAGTCCACTAAAC
ATCAAAGTAAACACTCGAGTTCATGATATGCACCATTGCAATGTCTTCCA
CGGACCCAACAGCTGATTGGTTGAAAGTGACGTATTGACTGTTTTTACGT
CACTTACAACCAATCAGCTATTGGGTCTGTATGTCAGAAGACAGAAGACA
TTGCAATGGTAAATAGACAAATGTCCATAACAATATTCATCTTGCCGGAT
TCAGTAGACTATTTTGTTTGGAATAGTCTCAAATAGTGGTTGTGAAAGTG
GGAATTAGCAAAAATACAAGTAGTTATATCCCTTGCAGTCTTCATTGCGC
AGAGTTTGCCTTAAAGCATCCAAAATTTGGAAGGTGATCGAGTGCTGAAA
ACAATCAATTTTGACGTCACTTTTCCCTGAATTTTTTCTTTGGTGTGTGA
TAATGATCAATAGGCAAATCGGGATATTCGAAATGTTTTATACGGCACCA
AATAAGACCGGCTGTTTGCCAGTAATTTTGAATCCAAACAATGAAACTAG
TGACAAACGCCCGGACTATTTTAGGTGCTTACGTATAAAACATTATAAGT
CATGGATATCATATATGCACCGTTTTAAAAGGATCTTGACTTGACAAAAT
ACCTTAAATGTCCCAAAATATCTAAAAATAAATCCGAGCTTTAGACATCA
TTACGTCATTGTAAAGGCAACGTTGTTTTAGTGACAATGACAAAACAAAA
TTTCTTTGGCAATTAACCGAAATATGTTGTTTATATATAATACGCTATAA
AGACGAAATACCGCAAGGACATACTACATACATTACGGTTAAAGCAATAG
CATCACATTAAAAATGTTGTATTGAAATCTATCTTATAGCATTATGATTA
AGTGATTTATTTCTAAAAACATTGGTTAGGTTGGCAGGGGGATTGCCATG
TTAACATGTCTGTTTTATCGGTCAAAATGATGAAAGCCTATTTAGCCTTC
TATTTTGATTTAATTCCATTTTGATGTTAATATCAAAAGAGGGAGGCTAA
TGAGTATTTGACGGAGATAATGATTCTTAAATAGGCGATTGATCACTTCA
TTCTGAACATAACGGTTTGGTGTGTATGAGAATGTGGAAGTAAACAGATA
ATAGAAAACAGGGATTTTGAACTTGGTTAGATCGGATCTGGTTAGGGTCA
GGTACAGTGAAGTCTCGAAGACACATGGGGAACACAAATTTGTTTAAGTT
TTCGAAATTTCGAGTATTGAGGTTTACATGTGAGGCATTTATAAGGCATT
GTTAGAACTGGAAAGGACGCAACAAACTTATTCCAGTTAAAGAGTTTCCA
CTGTATGCTCCTCAACTTGGCGAAAAAATACTTTCTCTCTTTAATTCGAA
CATATTAAATTTCTACGAGTTCAAAATAATGAAAGTGTTCGACGTAAAGC
ATGGTCAATTTTAAGCTAACCTTTGATCTCTAGGTATTAACGAAGCTCCG
GGTATTGCAGCGACTCAAAAGAAAGACAATATCTATTCGGTTTTGACAAC
CGCATTTCGCCGGAGAAAAANACAAACTTATTCCAGTAAAAGAGTTTCCA
CTGTATGCTCCTCAACTTGGCGAAAAAATACTTTCTCTCTTTAATTCGAA
CATATTAAATTTCTACGAGTTCAAAATAATGAAAGTGTTCGACGTAAAGC
ATGGTCAATTTTAAGCTAACCTTTGATCTCTAGGTATTAACGAAGCTCCG
GGTATTGCAGCGACTCAAAAGAAAGACAATATCTATTCGGTTTTGACAAC
CGCATTTCGCCGGAGAAAAACTTATAATATTGCACCACTGCATTACTCCC
AGGAAAAGCTACTAAAATTGGACCACCGAATCATCCTGGAAACTTTAGTC
GAAAATGGTATATTAGGGAGATAACGAGATAAATCTTTTGCGAAGTTCTG
TCGCCGGAGACCAGCTCAAATTTCACTCAGTACTGGACACGAGTGGAGCG
AGGAGAGACTCGCTAATAAAACAGATTGAGTCTTATTGAGACATTTTATA
TCTGGAATGAAAATAAATTGAGTAATCAAATCCAGTAAGATTGTTTGTGA
GAATATCGGTTATAGTCTTTGATCTTCTAAGTGAACTTGGTGACGATTGA
ATTAGTATCACTTGAGGTTTGATACGATTAAACGATGACATTGATTTTTT
CTTCAAATCTTTTTTTAAAAGCTGTAAAACTTATTCTAATGGTAGTAAAA
TATTTTTAATTCTACAGTGGGATTATAATGTCTTTTCCAATTGGTTGAGA
GTTTAATACACAGTGGAGATGAAATTTGATAGTTCTCCCGGTGCGATTTC
GCGGAGATTTCTGTAGGATCTTTCCAGGTCTATGAGATGGAGTGTATTGA
TATCTGTCACAACTTTATTTAAATTGGAGATTGTTTAACTCTTGGAAATA
AGTTCGTAGAATTCGAAAAGGAGAAGTTTTAATTAGCGAAATTTAACTTC
ATAAAACCTCGTACCGAGGTCCTTGTTTGGTATTTCATTAAAAAGTGGTG
AAAGTTGCTCATGGGTACGACATTGAATTGTACAATCAGAGAGTAATGGG
AAAGAGATGAGCTTCAGAGAGAGTATCACTTGAACTTGACGAGATTATGG
TTATGGTGAATAGATGGATGAGAGAACAGTTTGAATGTTGATTGAAATGA
TTAGTTTGGATTATAAGATGATGGAAATCGTTTTTGATTATGACTTGATG
ATTATAAGAGGAAATGTGGAAAAACTTTGTGATCAGAATAATGCTAAGAG
TTCAGACGTAAGGGTTCTCTCTCTCTGTACGGAGCTAGAAATACAGGGAC
GTAGGGAAAGGGGTCATTTGATACTACTTCTTTACTGAGTTAGTATAGCC
AGGGTTGGATAAATGCTCTGTCTATAATGACTTGTCTTGGCTAATAGAAA
ACAAAAACAAAAAAAAGAAACAAATACAATGGCAAGTAGCAGTGGTGAAG
AAGTAAGTTAAAAAATGAACCAAATTGAGGCCCTTCTGGTCCCAAAACGT
TAAAACAACATTCATCTGACATTTATAACGTCCATATATTGTTAGCCCTT
TCCGTGCCGATGTCGTATATATCCGACATGCAAATTTTCACTCTACTTGC
CAATGTCGGATATATCCGACATCAAATTTTTTTACCTAATTGNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNCATGTCGTATATATACGACATCGGCAAATCAGGTTACTAAAAAAA
ATTACCCCTCGGCAAATGGATTGGGGTACAAAAACAAGGTAACGGCACGC
AAAGGGTTAGATAGACGTTACAACGATGTTTGAGAGCTGGGGTGTAGTCT
CAAAACAGATCATCCATTCTGCTCACACTATTCCGCTCTGCTCCGTGGCG
AATACGATGATCTGACCTGGCTGTTCAGCCAAAACTATCAAACTGCTTTG
TCTTTTGCTAAAAAACGAGACCGAAAGCAACTTGGTTCTAATGTTTTTGT
ATATGATTTACGTTTGGTGCGATTATTTTGCTTTAGGCAATCACCGCGCG
CAAAAAAATCATTTAATATTCATCTCAAATCTGTATGAAAAAGATCAAAG
CGGTACGCCAACCTAGGCCGATTCTCATATGGATTCATAGCCTTTAGATT
GAATATGTTCCATGCACAGAGTATCAGAATCTGCTCGCGAATTATCTTGG
TTGGTTTAGTTGCATTTCGAATCAGCCATGGAGAGCCTTTATTTGACTTT
TAAACAGTTTTTTAGACTCGTTACACTCTTCTTTTTAGACTTCATTGAAC
CTGAATATCAAAGATGGTACAAGGAATTACTCAAAGGTAAGACGGCTTAA
TTATTTCCGGGTTTGTTAAATACAACCGTAGCCAATAGTTCACCTTAAAA
TGGGGTACTGTAAGGGAAGGTAAAGTTATTGAGAAGCTCAAAGTCTTACT
CCAGTTGACTAAGTTCAATTTGTTCGAATTACAGAGAGATTCTAATTATA
GAGAGTATTTTAGGGTTTCCCGTTGATTGGAATCATAGAAAGTTCGAATA
CATTTTTTATAAGAACATCCAAAATTTTTCAAGCCTTTAGATGTTCTTAC
CATGTTCTTATTTTCACCATTTTGGGAGTATTTTTGTCAATTTTCTTAAA
AAATCAGCCATCAAAATGTCCTTAACTTGTTCTTAACATTTTGCCCATCG
AAGCCTCTTGTTCTTATATAGTTTGTTCTTATACAAAAACGTGTAATAGA
GTCCACTGTAGGCATCGTTTTCGGACGTTCCGATGCGACAATGATTGACG
TCACAGAAGCTCGTAAAGAGTAAGGAAATCTTTAAAAAACGTGGCCGTAA
TCTGAAAACGAGGAGAAGCGATTTAGATTTTCTCAGCTCCCGTCTCACAA
AAAAAAAAGTTTATGTCCGATTATTACAAAAATGACAGGCGCTTTTAATT
GACAGCTCTCATTAAAACTAATTATAAAAAAAAGTCATTTTCAACAATGA
AGCATTACTTAATTGTATGCTTGTTCGTCTTTTTTTGTTATGAAGAAGTA
TTACTTTTATTCATTTGTTGCTGTTTTCTTTGAATGTTATTAAGAAAAGT
TTTCTCCTTTGAAGATTTCACATTGTATTTCTTACTTAATTGGTTAGCTT
CATTAAGCTTCTAAAGTACAGTGAAAATAATAAACAATTTGATGCGAATT
CTTTTGATATTATATTGGTATTGAGTGGCAGAGAAAAATGTTATGATGGG
AAAGTAATTTTGAAAGACTTTGAAAACATTAATCAAAAAGAAAAGAATTG
GTACAAAATTGGTACAAAAAACAGAGAGCACAACCTTTGTTTAAAATCAT
AAAATAAAATTTTTTCGCCATCATCAGTGATATTGGTGTTAGGACCAAAA
TTTGTATTTGGACCAAATTATGTTTGGATCGTTTCAAAAAACGAGCAGTG
TTGAAAGTCTACAAAAGATGATTCTACGCGAGGAAAAACAACGAAAAACG
AATGCTGAAAGACCGAATAAACTTAACATCAGATCAAAGGTAGATCCTTG
ATACTTGTAAAAACATCTTAAATTATATAAGAACAGCAAGGCTTAAAAAC
GCCAAAAAAATAAGGATAATATTGGGAGCAAACCTTAGCCTAAAAAGGCT
GAAATTTAGGCAAATTAAGAGACAAATTAGTAAAAATTCGGTATTCATAT
CAATTAATCTTGCTCTGGAACTATAAATGGCCGAATCTCAACTCTTCTAA
TGCGAACCTATATTCTATTAACACTCTCTGTTCTCGAACTAAAATAAAAT
TCTTTCTTTAATTCCAATCTTACTTTGGTTCGAAAAACAATTCTTGGCTC
CTTGAAGATGGAATTAGAGATGGAGAGATAGAGAATAAACTATAATTTCA
AGGAGGAACCGCCAGCCCTGGTTTAAAATAACTGTTTGACCAGCTTCTAT
CTTTTTCTTACAGAGCACAGACAGTGGATCGGATCCAGACGACAGCAACA
ATAACAATACAATAATCACACAACAATCTGAACAAACCAAGAATACCAAA
CCACAAGGACAAAGTAAGGAGAAATTTTTTTACATGGTTTCGGCCCATTT
TTAGTTGCCAAACGATTTAGGTCCCCCTTGAGTTAATGACTTTCGGGGTA
GCTTGGGAAAACAGTTACAAACAGTTTCGTAGCCGCAGTCAAGAGCCTTG
ACTAAAACAATTAGGTAGTACCCCATGAACAAGACAACCCTAAAAAATTG
CAAACTTTTGGTAGCCCCGAGCCCCATACCTGGTTCCCTTTACAATGGAG
TTTATTAATCTAGACTAGTTTTGATTTTGAGTATTTTCTACCTGTTGCGG
AGTAAAAAGGTGAAATATAATGTAAGCTCACCGTTACACTTTGTAATTGA
GACCGCCGCTTCCAGGAGATTGATTTTCTTGGAAACCTGTAAAAAAATTA
AAAAGTTGAAAACCAGTTCATTACTATTAATTTCCCTTTTAGTTCGCGCT
GGTCTACGTTCATTATACCTTGATAAACCAGTCCGTGTGAAGTTCGTCAA
CCACTCGGGAAAAGAGGTAAGCGAGTCATATTTTTGTTGCCACCTTCAAA
ATTGGAATGTGCATCTGAATATTTTTTTAAGCCCACAGCAATTTTCACAG
CTTTAGCCTAATCTCAAAACAAAACACCTTCTTTTCCAGACCAAAATCTC
TACCGTTTTGAGCCATAGTCCGGCTTCAACTGTTTAAAGAAGATTGCCGG
TGAGGGGTCCATTTCAGACTTAGTTTTAGAGTTTGGCAATCACAACTAGG
CTTACCAGACAGCTCTGTAAAATATCACCTACGAAGATATAGCTCTGCAA
GGTTAACAACCTCACCTAACTTTACTTTTCTTCAAAAAAAAAAATGAAAA
GACAAAATAATACAAACTGTCAGAAAATGTGTTGGTTTGAATTTGAAATG
GCTGGTGGTCATCGAATGGTTCTAATATTGTTTTGAATTCCCGCTGTTAA
CGCCTGTAAAAATAAAAATGATGGAATAATTACACGCTTTATACACAACG
CGTGCATACTATACGGGAATTAAAATTGTCCAGATTTCTAGCCTATACTT
AAACAAATCCCCCTAAATCCCCCCGAAAAGAGTTCCGCGTAGGGATAGGA
CACGTCACTTCGCTAAAGCAGGCTAAAGTAGTGTCTTGGGCTACAAATTT
ACTTTATCTCTTATCTCACATCTTGGTTCTTATTTATTCATTGTTTTCAG
GTTCAGTTATATTGGATCAACTTTGTCGGTGAATGTGAAAAAGCTTTCAA
AATTTTAGATGGTAAATCTGAAGTCGTTGACACATTCGAAACTCATCCTT
GGATTGCAGCAAATGCCAGAAATAAGAAGGTCTCACACGCCTTTACCATC
GGAAATAATTTGGTTTATTACCCTTTGATGGGACCGAATGGAGGCAAATA
TGCAGTCGCTGAAATTCGAAAAGCACCAGGTAGATTTTATCTCCCACCAC
TGATTTTGTTATTTTCACTTACTGAAATATTGAAAAAAAAAAAAATTTTG
GTCATTGTTCCGTTTTACTGAAAAAATTAAGATACATGGAAATTGAAACT
TAAAACAGCTAGTAACCTACAAACAATTAAAATGAGTAAATCCCTCAGGT
GTGGAAAGTACATTTGACACGTCCTTGGACCATGAACTATTTTTCCTGTG
CTAAGAGTACTATTTTTCCTGTGCTAAGAGTACAATTTTTAACGGATTGG
AATTATATTGCAATGTACGATAGTTTCACCCTAACTGAAGAAATAATTAA
AAAAGAAAAAGTCGCCTGATTGAAGAATTCCAGTTCAGTGAAATTAGATA
ACCTTTTTCTTGTTTAGAAAAACTAGCAGATTTAATATCGCGACCAAATG
GTACAGAAGTCTTGGTAAAATTTATAAACAGAACGTCGAGACCAGCTTAT
CTTGAAATGGTCAATCCAGAAGGTATTTATAATGACTATATACTTGCATT
GACTTAGTAGACCTTGAAAAACTATGCACTTAGTAACCTCCGATTGAATT
ACGTTAGATAACATGGCTATTGCTAGAAATTTCGAAGGCTTGAGTCTTGA
AACTTATGTATATGGGCTTTCCCAGAAAAAAACCGTACACCCCCTGTTGA
GGAGGTAAATTTCCGTTCCTAGGGGGTAAAGTTTGAAATGTTGAGGAATT
CCATAGGGTTTACAAAAATCCATTAAAAATAAGCGGAATTCCATGGGGTA
TTGTTTGAAAACCCACAAAAATTTGGAACTCCAAAGGGTTTTGACCCTTA
AGTTTCTTGGAATTCCAGGGGTAGCTCATACAAAAGGTTTGACCTCCTCA
ACAGGGGGTGTACGTTTTTTTTCTTGAAAAGCCCTGTGGTTTAAGAAGAA
ATTTTTCTAGACCTTTATTTTTAAAATTGATTAGGCTCAGACTCCGGTTG
TGTTCTTGTTTTAAATTGTTCTTATAAAAAAGCGTTACCACAAAAATAGG
AACTTTTTTTAAATTAAGACCTTTAAAGTGCTTAAACATGCTTTATAAGG
ATAGCACCTTATAATCAACGATATCTTCTTTTTGACTAGGCGATAGAGAA
TTGAAACACACGTTAGAAGCAGGACAAAGTTGGACGACGTGTACACAAGA
AAAGACGTTCTGGATCACCACTATGGATCAAGAAACGGACGAAGGACTCT
TACTGAACTACGGATGGTATTATTCACCTGTCAAAACCAGAATGAAGAAA
GAACGGTGCTATATCACTGATTGTAAGCTCCTCTCTAAGAACGCCCAAAA
ATTTTGAAGCCTTTAGATGCTCTTAACTTTTTGAGTTTTAAGCCTAAAAA
TGTTCTTAACATGTTCTTATTTTCTCCATTTTTTGAGCATTTTTGCCCAT
TTTTCTAAGAAACGGCTGTTTTAGTGTCAGCAAAGCCTTAAAATGTCCTT
AACTTATTCTTAACATTTCGGCCATCGAAGCCTCAAATGTTCTTAAATGT
TCCTATAAAGAAACTTTTTCATTGGAGAATGAGCAGAAGCCTCGGACGCC
CTTTAATCCAAACCCGGTCAGGTATGGAAGCCTGGAAGGTTCATCATGTT
AGCTCCTTCTAAAACAATACATTATCAGTTAACTCTGTTTTATCTCGAAA
TATTTACTTGGATCTTCTGACCTTATCTGAAAACTTGGCAGTTTTTGGGA
ACGCGACAAAAATCCCAACAGTTTTGACGATACCTCCAGTTTTGGAAGAA
CTCGCATGATGACACTTCTTGGCTTATATACAAAAAGATGAAAGATGTCT
CCTTTAAATGAAAAGAGATTTCATTGCCCAGGTTATCGTCTAGTGTTTAT
CTCAGTAGGGAGGGAAACCTACGTGCTTGTGACGCTTATGACTATACGCA
ACACAATCAAAACTGGTTTCTTTTTTATCTTTAGGTTATATTTCTTTCCA
TAAAAACCCAAAAAGTATACGAAAGACCTTTAGCCGATCATTACAGCGCT
TGAAACATTGTTTTCAAATAAGTTGTATTTCTTTTACAGATATATAAGGA
GTGGGCCAGCAGCGAAGAGACGTAGATACTAACAACAACACAGCACATAC
GTAAAATTTATCCATTGAGAATAGCAAAAGAGAGAGGATGGAGAGAGAAC
TTGTGTCTAACAAAAAGATGAAACTCCTCACAGCAAGGTCAACAACCATG
ATGAATGGATACTTTGTATAGCTGGAGTGAAAATTCACCAGAAAAAAGCT
TCAAAATAGTTAGAAACATCTAAAGGAAAAACTATTAAGTGACATCACGA
GCATCCAAAAACAAAGCTCATGGTTCAATAGTCAAAATACTAATAAATTT
TGAAAGTCAACAAAATCCAAATTTTTATTATAAAACCGTAATATTATTTA
AAAGATATCAAATATTATACGTAACGATTTTCTGCAGGTTTTATCAGGAA
ACTGTGTTACGATATTTATTTAAAACATCGTTACTACAATACTTTTTGGA
AGCAATCATCATTTTGTAAATTTTTTCTATATTTTTTTGATAGTTGCTTT
TCTTAAAAAAAAAAGAAAAATTTGTATTTTTCTTTCCTATTAAGAATCGG
GAAATAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_039011XLOC_039011Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00062240-exon-scaffold_362-1575043694:260738..260879TCONS_00062240-exon-scaffold_362-1575043694:260738..260879Clytia hemisphaericaexon
TCONS_00062240-exon-scaffold_362-1575043694:249894..249941TCONS_00062240-exon-scaffold_362-1575043694:249894..249941Clytia hemisphaericaexon
TCONS_00062240-exon-scaffold_362-1575043694:248167..248266TCONS_00062240-exon-scaffold_362-1575043694:248167..248266Clytia hemisphaericaexon
TCONS_00062240-exon-scaffold_362-1575043694:247664..247737TCONS_00062240-exon-scaffold_362-1575043694:247664..247737Clytia hemisphaericaexon
TCONS_00062240-exon-scaffold_362-1575043694:246751..246979TCONS_00062240-exon-scaffold_362-1575043694:246751..246979Clytia hemisphaericaexon
TCONS_00062240-exon-scaffold_362-1575043694:246258..246362TCONS_00062240-exon-scaffold_362-1575043694:246258..246362Clytia hemisphaericaexon
TCONS_00062240-exon-scaffold_362-1575043694:245458..245640TCONS_00062240-exon-scaffold_362-1575043694:245458..245640Clytia hemisphaericaexon
TCONS_00062240-exon-scaffold_362-1575043694:244122..244690TCONS_00062240-exon-scaffold_362-1575043694:244122..244690Clytia hemisphaericaexon
TCONS_00062240-exon-scaffold_362-1510915933:260738..260879TCONS_00062240-exon-scaffold_362-1510915933:260738..260879Clytia hemisphaericaexon
TCONS_00062240-exon-scaffold_362-1510915933:249894..249941TCONS_00062240-exon-scaffold_362-1510915933:249894..249941Clytia hemisphaericaexon
TCONS_00062240-exon-scaffold_362-1510915933:248167..248266TCONS_00062240-exon-scaffold_362-1510915933:248167..248266Clytia hemisphaericaexon
TCONS_00062240-exon-scaffold_362-1510915933:247664..247737TCONS_00062240-exon-scaffold_362-1510915933:247664..247737Clytia hemisphaericaexon
TCONS_00062240-exon-scaffold_362-1510915933:246751..246979TCONS_00062240-exon-scaffold_362-1510915933:246751..246979Clytia hemisphaericaexon
TCONS_00062240-exon-scaffold_362-1510915933:246258..246362TCONS_00062240-exon-scaffold_362-1510915933:246258..246362Clytia hemisphaericaexon
TCONS_00062240-exon-scaffold_362-1510915933:245458..245640TCONS_00062240-exon-scaffold_362-1510915933:245458..245640Clytia hemisphaericaexon
TCONS_00062240-exon-scaffold_362-1510915933:244122..244690TCONS_00062240-exon-scaffold_362-1510915933:244122..244690Clytia hemisphaericaexon
TCONS_00062240-exon-scaffold_362-1491911889:260738..260879TCONS_00062240-exon-scaffold_362-1491911889:260738..260879Clytia hemisphaericaexon
TCONS_00062240-exon-scaffold_362-1491911889:249894..249941TCONS_00062240-exon-scaffold_362-1491911889:249894..249941Clytia hemisphaericaexon
TCONS_00062240-exon-scaffold_362-1491911889:248167..248266TCONS_00062240-exon-scaffold_362-1491911889:248167..248266Clytia hemisphaericaexon
TCONS_00062240-exon-scaffold_362-1491911889:247664..247737TCONS_00062240-exon-scaffold_362-1491911889:247664..247737Clytia hemisphaericaexon
TCONS_00062240-exon-scaffold_362-1491911889:246751..246979TCONS_00062240-exon-scaffold_362-1491911889:246751..246979Clytia hemisphaericaexon
TCONS_00062240-exon-scaffold_362-1491911889:246258..246362TCONS_00062240-exon-scaffold_362-1491911889:246258..246362Clytia hemisphaericaexon
TCONS_00062240-exon-scaffold_362-1491911889:245458..245640TCONS_00062240-exon-scaffold_362-1491911889:245458..245640Clytia hemisphaericaexon
TCONS_00062240-exon-scaffold_362-1491911889:244122..244690TCONS_00062240-exon-scaffold_362-1491911889:244122..244690Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_362supercontigscaffold_362:244122..260879 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0.0430372	0.48088	4.01493	3.4135	11.9304	9.74014	6.28345	12.0068	18.4162	15.9566	11.9229	10.254	2.94538	2.70713	36.6033	34.8681	1.29376	2.58576	2.59805	3.2524	5.26932	6.81273	0	0.72541	5.55283	5.16972
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00062240 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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