TCONS_00062219 (transcript) - C. hemisphaerica

Overview
NameTCONS_00062219
Unique NameTCONS_00062219
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4410

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00062219 ID=TCONS_00062219|Name=TCONS_00062219|organism=Clytia hemisphaerica|type=transcript|length=4410bp
aagaCATGTTAACAAAGCCATGACACGCCACCCGCTAGAGCAGAGAGGAT
CAGAGCTGCGGCGACTGTGTGTTCAATTAAAAATCCTACCTTTAGTTTAT
TACACAACCTCTTGCAGCTAACTCAGGCCAATTATTGCCTTGGAGATGGG
ACCTGGATCAGGGATTATCATAACATTTCTTGCCAAGAATATTGCACCAC
ACATTGCCTGCTTTGCAAGTGACATTAATTCCCATGCATCATATTGTACA
AGAAAGACATCACTTGAAAATGGTGTTGCTGTTGAAGTGACAACTGATAA
TTTGattggaagttttcaaaaaagattgcATAACAAAGTTGACATCTTGA
TTTTTAATCCACCATATGTAGTAACACCTTCAGCCGAGGTAGGAACTTAT
GATTTATCAGCATCTTGGGCTGGTGGAGTCAATGGAAGAGAGGTGATTGA
TAAGTTCCTCCCATTGGTTCCGGAGTTGTTATCCAAAAATGGTTTTCTAT
ATTTGTTANTGATAAGTTCCTCCCATTGGTTCCGGAGTTGTTATCTAAAA
ATGGTTCTCTATATTTGTTAGTACTGGAGCAAAACAAACCAGaCGAAATT
GTTGAGATGATGCAGAGTAAATACAATCTACATGCAAGTCTTATAATGAA
ACGAAAGGCTGGACCAGAGTATTTAAAAGTATTTCGTTTTGAATTCATAA
CATGATTATAGACTTTTGATTACTGACGTTGTTGGACAAGAAGGAGAGAT
TGAGAAGTTATCAATTGggaaagaaactttttcaattcATCCCTTGGTGG
CAAAAACATTCAAGTTAGGTTTCATAGCGTACCCAATTCCGCCATTTCGA
caatttttcctgatttttctgtgatttttgtCTTATCATATAAACAAGAA
TAGAAATCTAGCACCGACTATTTCctttaaattcaagatttttgtaaaaa
tgtctaGAAATAGACTTTCTTTAAACAGACTTAAACAACCCGATTTTCCA
TCTTTGACAAAGTTATCAtgaagcaaagttcagccaaaaatCGACTCTCT
AGTAATAAATGAGAGAATTTATCTTGATATGTAAATTAAGTGCTTTAACA
CTATATatagaaaaagttaaaattttacaatataTCATTGATAGAATAAG
ATTATGAAACAAATTATAACAAGTATTTACAATATTGCGGTAAAAGAACG
AAATCGTAAAATCTTGATCACCCAAATGTGTCATCAGCGAACTTAAGTCC
CgcgaaatcttgaaattttgcagatgCCGTGAATCGTAAACCCATTAAAA
TAGTTTATAGTTTCCAAGTTTTCATTTCTCTGTGATTGACGTTGATTTAG
TTTTACTCAACTCAATTTGAGTCTTCTTCCTGTTCTTCCCATAAAGCTGC
TGTTTAAATTCAGTTTTTGTGTTCTTGTTCATCGCGTAGAATGCGAAAAT
AAACACACCTCGAAAAGATCGTAAAACGTCATAAACCAATCCAAAAACTG
CATTGAGAATACTCTCATTTTCTGTCAAGTTAGATCGTTTGATTTGAACT
AAACCCAATAATTCTGTTATTCCCAAAATGAGCATTAGTTTAATTCCAAC
TTTTAGTAATCCAACGTCTTTATGTTGTCCTTTTCCAAGAGTTTTTTGAG
ATTCTCTACTCTTCTTTCTAATGGAAATCAAAAGCATACAAAGACACAAC
AAACATGTAAAATACTCAATAGAAGctggaataaaataaaatgccaAAGA
CCAATACCAATTTCCGAACCAACAATATTTAGAATCTAACTCAAATACAA
TAGAATCAGATTCCTTTAAGATGAGCAGAGTTCCACAAATGATCGTCGAG
ATCGCAATAGTTGCAAGCAGTCTCTTTTGAAGCATCTTCACCGATTCCTT
TCGATCAGATCTTGACAGAGATCTCTTGGTAAACTGCAACATCATATCAA
TGGCAACCATTCCActccaaatcaaaacattgaccaaAGACCAATACAAA
ACCACAAAAATCCCTGTACAAGACAAAGAGCCTTTCCTTAAATGAAAATT
AGCAAGGAACATTGAATCACTGAATAGCAAAAAGGCAACAAGAACAGTAA
TATATAAACCACCAGTGTTTCTCAAGCTTTTTATTGCAGCCAAGGTAACG
AGGAACATGAGGTATGAAAACAAGCTGAAACATGTTCCAATAACCGagac
atgatattttgcatttttaacagttttggACCAATCAAATTCCTGTTGAG
TCATTCCACTGCGAATAGCTTCGATGCATATTTGAAAACCTTCTGCAAGT
GGAAAATATTCATCAATGGGATAGACTTTTTGTTTTGCAGATTTTGGAGA
TTCCCCTTCAATCAGTAAAGATCCATTTGGAGATATTTGATAGATTGATG
GGTATATTGTTTGTCTTGAACACGTTGAGTGCAAATGAAATGCCTCACAG
TAGATTTTCTCTTCAAAGACGATCCCATCCTGTATTGTGAATATTAGTTT
TGAATCCAGATTATAATCAACTGTTTTTGTCATGTTACAAGTTCGATTTG
CATTGTGAATAACTTCGTCAGTGAATCTACCACAGAGTCTGTAGTTACTG
AAAGATCTAGTCAAATCGAACCCATATTGATTTGGAATGATTTGATCATG
AAATTTGATTGTTGTGGTAAGAACAGCTTTATCAATATGTTTGTTATAAC
GTGTTTCGTTAAGGAGATTTTCCTTCCATTTTAAATCAGATTCAAAATCT
GTTGATTCCAAAACGAAAACAGTTTGATTTTCATACAAGACTCTCCAATT
ACTTCTGcgaagaaaattgaaaagtgTTGAATAATTTGTTTCGTTGGTGA
CATTGTTATTTGTGTTGATTTGGAAGAAGATGAATAAAGAAATTGCTTGA
TGGATCTGATCCAAGCATCGGAATGATTGTTGATTGTTTTGGCGCTCACC
GTCGACCATGGGCCGtcttgtatttgtttgatttgacTTGATTGGTTCGG
TGGTCGTATTTCTGAAAGATTGGCATTTATGGGTTTTTGATGAGTGAGAA
AATCCTCCATTACAACTTCTGCAATATCCAGTAGAATCGATGAATTTAGG
TGTCAAACATTCacatttgccgttcgattgtcTATCAAATCCCATTCTGC
ACGGTAATGGTTTGCATTTATTTTCAGTGGTTGAGAATGTGTATCCAATC
TGGCAAATTTGTTGACATTGTCCTTGGACAAGACGTTGCCCTTGACCACA
TTGGATGGCTCTACACAGCCCGCCTGCCATTTTGATCTCGTTCAGACCGC
ATTTGTTATCACTGATCCCACTATTTAGATTGATGACCAGGGACCATCCA
TCAGGCATTGACTTACATGGTTTTCTCACTGTACCATCTAAAAGATTCTG
AGAACgacatttttcacaaaaaacatttttggtagATTTAGTTGTATATT
TTCCATTGAAGAAATACCCTAAAAAGATTTGACAAAATATTGCATCTGTG
GTGCTACATTTGTTTGGTTCACACTTCAAAATTGTATCTTCATATTGAGG
AACTAATCCACACCAAGGGTATTTCTGCAGGACTTGATAAAAAGGTGTGT
CTGCCAATAAATATTGATCTGGATACTTGTTGCGCGAGACAGAAACCTTG
CAAGACAGTTTCATGAAATCATATCGATAAAGAAAAACATTATTACACCG
TGCGCAGTATGAGTTCTTATATAAATAACGATCATTACCATAAACTGGCT
TATTATTTTCACCAACTACTGTAGCCTTCTCACAACCATCAACATATGTT
TGATTGGCCCCTGGCAAGCAAGAATCAACCATGATATAGTGATTACCAGA
CCAAAGGGACATATCTGGAACATATCTAAACATTGGTAAACACGATTGTC
CTTTAGTTAAACTCTTTACACTCTCGATGTAATGTTTGGCACTAGATTGA
AATTGGTGATATTTATACCATAAGAAATCAATACAACAGTCACCCTTGGA
TATGCAAGATTCGCCACAGCTACATTCACCAGGGCGTGTCCATATTCGGC
ATTGGTAACCATACCAACCAATATCAATTCCAATATTTAATTGCTTTAAG
AAGCTGCTCAATGGAAACGGATTGTCATATCctggttttgtttttgttaa
agATGGAAGCCTATCGCTATCATAACATTTCATCAGATAGTTTCTAAACT
TCGTAGATGAAGTGGAGTGTGGACTATGAGTGTACCCTCCACCGCCGTAC
TGTCCTGAAAACGTCGAATGAGTAGTGCCGGGGGTCGTGTAAACACCCCA
TGTAAATACCAGAGTCGTTGTGTTGATTAAGAAGTATAATTTAAGCAGAG
TCTTGAGTAGAGTCATCGCTTTTTCGTATCGTCTTTGTTTGTCTTCAATA
GGAttctatt
Run BLAST on NCBI

transcript from alignment at scaffold_362:994365..1001884+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00062219 ID=TCONS_00062219|Name=TCONS_00062219|organism=Clytia hemisphaerica|type=transcript|length=7520bp|location=Sequence derived from alignment at scaffold_362:994365..1001884+ (Clytia hemisphaerica)
aagaCATGTTAACAAAGCCATGACACGCCACCCGCTAGAGCAGAGAGGAT
CAGAGCTGCGGCGACTGTGTGTTCAATTAAAAATCCTACCTTTAGTTTAT
TACACAACCTCTTGCAGCTAACTCAGGTGAGTTAACGAAGTCCAAAACCT
ATTTCTTAATTTCCCCAGCGCTTCCCATTGTTACTTAATTCTCATATATA
GCTCTCAAAAGAAGTGTATTAACGTCACGGAAAGTGCACAGGGTCAAAGA
TTTAAATTAAGCTGATTTCAAGATAttggccaaaaactgattttgatgTC
ATAGAGGTAAGATTCAAaggacgtcattattgaaataGGTTATGGACTTG
CCTTAACTAACCTGAGAATGCAAATGCCTtatgaaaatcattttttttat
caCATAGGCCAATTATTGCCTTGGAGATGGGACCTGGATCAGGGATTATC
ATAACATTTCTTGCCAAGAATATTGCACCACACATTGCCTGCTTGTAAGT
TTGATACAGTATTTCatatatatttatatttatttattcagGTGTCATAC
ATACAGTACCTAattttttaagataaaaccttCCTAGAGAAAGAAAAATC
GTAAAGGGAATGGTAAATTATTAGTTCTTCATTTGTTTCAATTGAcaaac
acatatttttttcaacACTGTAAACTTATCTCATATTGACAATCCCCATC
TAATTCCTTCAACCTCGTTTAGAGATGGAAATAATAGAGAGGTTGGAATC
GCTGATCAAAACTTTATACCCTTGTTCACCAGTTCGCAGTTAGACAGGCC
TTCCTATTGTAGATCTTTTACTAACTAGGATACCATGTATATTCCTCCTT
AAGGAATTTTACTTATTCGACAGTGCAAGTGACATTAATTCCCATGCATC
ATATTGTACAAGAAAGACATCACTTGAAAATGGTGTTGCTGTTGAAGTGA
CAACTGATAATTTGGTAAGTACCTGAATTATTATCTATACAGTAAACCTC
CAATTAACGAACTCTCTAAAAAAGGCtgtgattagcggacaattttaTTT
CCCTGGCCATTTCCTATTCAAATCCTTgtgaaaaagtttccaaaagatGG
ACACTCAGGGGACTCTCCAATAAgcggacaaagtttttgcacaAAATGGC
CAAACCCCCACTTTTCCTTTCTAATTTGCGGACATTCGAGGTCTTACTGG
TCACAGACTAGAGCTTGGGAGCACTCCCTTTATCCAGTCGTTGAATTTGC
ATACgttataaaaatgataaattacaGGGACCTCAAGACTACTTTGATTA
ATgaaaaactaaattgttgcaCTTGAATAATCATTCTCGTGTTTTTCCAT
GTCCTAGTGTCTCTAGAAAAGCACGGATCAAAATGTTACATACTTAGGNA
AAAATCGTAAAGGGAATGGTAAATTATTAGTTCTTCATTTGTTTCAATTG
AcaaacacatatttttttcaacACTGTAAACTTATCTCATATTGACAATC
CCCATCTAATTCCTTCAACCTCGTTTAGAGATGGAAATAATAGAGAGGTT
GGAATCGCTGATCAAAACTTTATACCCTTGTTCACCAGTTCGCAGTTAGA
CAGGCCTTCCTATTGTAGATCTTTTACTAACTAGGATACCATGTATATTC
CTCCTTAAGGAATTTTACTTATTCGACAGTGCAAGTGACATTAATTCCCA
TGCATCATATTGTACAAGAAAGACATCACTTGAAAATGGTGTTGCTGTTG
AAGTGACAACTGATAATTTGGTAAGTACCTGAATTATTATCTATACAGTA
AACCTCCAATTAACGAACTCTCTAAAAAGGGCTGTGATTAACGGACAATT
TTATATCCCTGGCCATTTCCTATTCAAATCCTTgtgaaaaagtttccaaa
agatGGACACTTAGGGGACTCTCCAATAAgcggacaaagtttttgcacaA
AATGGCCAAACCCCCACTTTTCCTCTCTAATTTGCGGACATTCGAGGTCT
TACTGGTCACAGACTAGAGCTTGGGAGCACTCCCTTTATCCAGTTGTTGA
ATTTGCATACgttataaaaatgataaattacaGGGACCTCAAGACTACTT
TGATTCATgaaaaactaaattgttgcaCTTGAATAATTTTTCCATGTCCT
AGTGTCTCTAGAAAAGCACGGATCAAAATGTTACATACTTAACCCCTTAA
TAGTACCTTATACCAAAATTAGAGCACATAATTAACaggtttctaaaagg
cggacacttctaattagcggacactgaCCCTATTCCCCGacggtgtccgc
taattagaggttccactgtattcCATAATTTTTCCTATTTATTTCTTCTG
AACTTGTTTTAATTCATCTCTCTTTAACCATATTATTTGGTTATGTTAGA
CTTTTTTAATGTGGTTTACAAATAAAGCTGGTTTATTAAatgttgttatt
atttttgaatttccagattggaagttttcaaaaaagattgcATAACAAAG
TTGACATCTTGATTTTTAATCCACCATATGTAGTAACACCTTCAGCCGAG
GTTAGTAAacatatttttattgtttttttggttGTTTAAAAATTTGATGT
ATGCTGTTTGTTATTGTTCTCTTTTTGATTTTCTGCATATTAAAAAAGAA
GTAATGTTTGATAcaatgaaaaaagtaaaataaagaaCCTAGAAAAGGCA
GAAATCATTACAATAATTTCTATTCAATAGGTAGGAACTTATGATTTATC
AGCATCTTGGGCTGGTGGAGTCAATGGAAGAGAGGTGAGTAATGTCttct
ttatttaaaagaaataccttAACTCATTTAAAAAAGGTAAATGCCTCCCC
TTGAATCCTCTCTTTTACAGTCAGAAAATCTCAATATAAATTTATATTCT
CaacatatatttttatttaaattacaaaatgaattttcccaaaaaccaAA
GCAACAGTGATAGATCTTGCACCATCTTTCTGAAGGTGTTTCTCTCGAAT
TGAATGTATCCTTCTAGGTGGTGGATAATTCTCAATTTTTAGCTCGTAGC
TTTGATTCCCGTATTCTTCTAGGTGGTGGATAATTCTCAATTTTTAGCTC
GTAGCTTTGATTCCCTTTGGACAACTTTaaccattttattttatagGTGA
TTGATAAGTTCCTCCCATTGGTTCCGGAGTTGTTATCCAAAAATGGTTTT
CTATATTTGTTANTGATAAGTTCCTCCCATTGGTTCCGGAGTTGTTATCT
AAAAATGGTTCTCTATATTTGTTAGTACTGGAGCAAAACAAACCAGGTAT
AATATGATAATTGCTCTGAACTCTGAACTCAATTTCTTTTAAAGTGAcat
aaaatcacaaaatatttgaaaggtTTCATAGTAACAAATCCTATTTCTAT
TAGAATCAGAAATTTATCCAATTAAATGTTtcgtaggctgctggcatcca
ctaacggattcgtgctccttatactacctgggggttttgtagaggtctgc
gattcagactacttGTTTCGCAACATTAACAACATTCgttatttttgaaa
agagcTCAGAGctctaaaaaaaaatcaaactcaagATTTCAAAAACCACA
CGCCGACAGAAAAATTCTGTGCAGTAATGTTGATTTTCACACGCGtgtga
tttattgattttttcctgtgattttaataaatgcattttttttttacctt
agaCGAAATTGTTGAGATGATGCAGAGTAAATACAATCTACATGCAAGTC
TTATAATGAAACGAAAGGCTGGACCAGAGTATTTAAAAGTATTTCGTTTT
GAATTCATAACATGATTATAGACTTTTGATTACTGACGTTGTTGGACAAG
AAGGAGAGATTGAGAAGTTATCAATTGggaaagaaactttttcaattcAT
CCCTTGGTGGCAAAAACATTCAAGTTAGGTTTCATAGCGTACCCAATTCC
GCCATTTCGAcaatttttcctgatttttctgtgatttttgtCTTATCATA
TAAACAAGAATAGAAATCTAGCACCGACTATTTCctttaaattcaagatt
tttgtaaaaatgtctaGAAATAGACTTTCTTTAAACAGACTTAAACAACC
CGATTTTCCATCTTTGACAAAGTTATCAtgaagcaaagttcagccaaaaa
tCGACTCTCTAGTAATAAATGAGAGAATTTATCTTGATATGTAAATTAAG
TGCTTTAACACTATATatagaaaaagttaaaattttacaatataTCATTG
ATAGAATAAGATTATGAAACAAATTATAACAAGTATTTACAATATTGCGG
TAAAAGAACGAAATCGTAAAATCTTGATCACCCAAATGTGTCATCAGCGA
ACTTAAGTCCCgcgaaatcttgaaattttgcagatgCCGTGAATCGTAAA
CCCATTAAAATAGTTTATAGTTTCCAAGTTTTCATTTCTCTGTGATTGAC
GTTGATTTAGTTTTACTCAACTCAATTTGAGTCTTCTTCCTGTTCTTCCC
ATAAAGCTGCTGTTTAAATTCAGTTTTTGTGTTCTTGTTCATCGCGTAGA
ATGCGAAAATAAACACACCTCGAAAAGATCGTAAAACGTCATAAACCAAT
CCAAAAACTGCATTGAGAATACTCTCATTTTCTGTCAAGTTAGATCGTTT
GATTTGAACTAAACCCAATAATTCTGTTATTCCCAAAATGAGCATTAGTT
TAATTCCAACTTTTAGTAATCCAACGTCTTTATGTTGTCCTTTTCCAAGA
GTTTTTTGAGATTCTCTACTCTTCTTTCTAATGGAAATCAAAAGCATACA
AAGACACAACAAACATGTAAAATACTCAATAGAAGctggaataaaataaa
atgccaAAGACCAATACCAATTTCCGAACCAACAATATTTAGAATCTAAC
TCAAATACAATAGAATCAGATTCCTTTAAGATGAGCAGAGTTCCACAAAT
GATCGTCGAGATCGCAATAGTTGCAAGCAGTCTCTTTTGAAGCATCTTCA
CCGATTCCTTTCGATCAGATCTTGACAGAGATCTCTTGGTAAACTGCAAC
ATCATATCAATGGCAACCATTCCActccaaatcaaaacattgaccaaAGA
CCAATACAAAACCACAAAAATCCCTGTACAAGACAAAGAGCCTTTCCTTA
AATGAAAATTAGCAAGGAACATTGAATCACTGAATAGCAAAAAGGCAACA
AGAACAGTAATATATAAACCACCAGTGTTTCTCAAGCTTTTTATTGCAGC
CAAGGTAACGAGGAACATGAGGTATGAAAACAAGCTGAAACATGTTCCAA
TAACCGagacatgatattttgcatttttaacagttttggACCAATCAAAT
TCCTGTTGAGTCATTCCACTGCGAATAGCTTCGATGCATATTTGAAAACC
TTCTGCAAGTGGAAAATATTCATCAATGGGATAGACTTTTTGTTTTGCAG
ATTTTGGAGATTCCCCTTCAATCAGTAAAGATCCATTTGGAGATATTTGA
TAGATTGATGGGTATATTGTTTGTCTTGAACACGTTGAGTGCAAATGAAA
TGCCTCACAGTAGATTTTCTCTTCAAAGACGATCCCATCCTGTATTGTGA
ATATTAGTTTTGAATCCAGATTATAATCAACTGTTTTTGTCATGTTACAA
GTTCGATTTGCATTGTGAATAACTTCGTCAGTGAATCTACCACAGAGTCT
GTAGTTACTGAAAGATCTAGTCAAATCGAACCCATATTGATTTGGAATGA
TTTGATCATGAAATTTGATTGTTGTGGTAAGAACAGCTTTATCAATATGT
TTGTTATAACGTGTTTCGTTAAGGAGATTTTCCTTCCATTTTAAATCAGA
TTCAAAATCTGTTGATTCCAAAACGAAAACAGTTTGATTTTCATACAAGA
CTCTCCAATTACTTCTGcgaagaaaattgaaaagtgTTGAATAATTTGTT
TCGTTGGTGACATTGTTATTTGTGTTGATTTGGAAGAAGATGAATAAAGA
AATTGCTTGATGGATCTGATCCAAGCATCGGAATGATTGTTGATTGTTTT
GGCGCTCACCGTCGACCATGGGCCGtcttgtatttgtttgatttgacTTG
ATTGGTTCGGTGGTCGTATTTCTGAAAGATTGGCATTTATGGGTTTTTGA
TGAGTGAGAAAATCCTCCATTACAACTTCTGCAATATCCAGTAGAATCGA
TGAATTTAGGTGTCAAACATTCacatttgccgttcgattgtcTATCAAAT
CCCATTCTGCACGGTAATGGTTTGCATTTATTTTCAGTGGTTGAGAATGT
GTATCCAATCTGGCAAATTTGTTGACATTGTCCTTGGACAAGACGTTGCC
CTTGACCACATTGGATGGCTCTACACAGCCCGCCTGCCATTTTGATCTCG
TTCAGACCGCATTTGTTATCACTGATCCCACTATTTAGATTGATGACCAG
GGACCATCCATCAGGCATTGACTTACATGGTTTTCTCACTGTACCATCTA
AAAGATTCTGAGAACgacatttttcacaaaaaacatttttggtagATTTA
GTTGTATATTTTCCATTGAAGAAATACCCTAAAAAGATTTGACAAAATAT
TGCATCTGTGGTGCTACATTTGTTTGGTTCACACTTCAAAATTGTATCTT
CATATTGAGGAACTAATCCACACCAAGGGTATTTCTGCAGGACTTGATAA
AAAGGTGTGTCTGCCAATAAATATTGATCTGGATACTTGTTGCGCGAGAC
AGAAACCTTGCAAGACAGTTTCATGAAATCATATCGATAAAGAAAAACAT
TATTACACCGTGCGCAGTATGAGTTCTTATATAAATAACGATCATTACCA
TAAACTGGCTTATTATTTTCACCAACTACTGTAGCCTTCTCACAACCATC
AACATATGTTTGATTGGCCCCTGGCAAGCAAGAATCAACCATGATATAGT
GATTACCAGACCAAAGGGACATATCTGGAACATATCTAAACATTGGTAAA
CACGATTGTCCTTTAGTTAAACTCTTTACACTCTCGATGTAATGTTTGGC
ACTAGATTGAAATTGGTGATATTTATACCATAAGAAATCAATACAACAGT
CACCCTTGGATATGCAAGATTCGCCACAGCTACATTCACCAGGGCGTGTC
CATATTCGGCATTGGTAACCATACCAACCAATATCAATTCCAATATTTAA
TTGCTTTAAGAAGCTGCTCAATGGAAACGGATTGTCATATCctggttttg
tttttgttaaagATGGAAGCCTATCGCTATCATAACATTTCATCAGATAG
TTTCTAAACTTCGTAGATGAAGTGGAGTGTGGACTATGAGTGTACCCTCC
ACCGCCGTACTGTCCTGAAAACGTCGAATGAGTAGTGCCGGGGGTCGTGT
AAACACCCCATGTAAATACCAGAGTCGTTGTGTTGATTAAGAAGTATAAT
TTAAGCAGAGTCTTGAGTAGAGTCATCGCTTTTTCGTATCGTCTTTGTTT
GTCTTCAATAGGAttctatt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_039003XLOC_039003Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00062219-exon-scaffold_362-1491911889:994365..994490TCONS_00062219-exon-scaffold_362-1491911889:994365..994490Clytia hemisphaericaexon
TCONS_00062219-exon-scaffold_362-1510915933:994365..994490TCONS_00062219-exon-scaffold_362-1510915933:994365..994490Clytia hemisphaericaexon
TCONS_00062219-exon-scaffold_362-1575043694:994365..994490TCONS_00062219-exon-scaffold_362-1575043694:994365..994490Clytia hemisphaericaexon
TCONS_00062219-exon-scaffold_362-1491911889:994772..994858TCONS_00062219-exon-scaffold_362-1491911889:994772..994858Clytia hemisphaericaexon
TCONS_00062219-exon-scaffold_362-1510915933:994772..994858TCONS_00062219-exon-scaffold_362-1510915933:994772..994858Clytia hemisphaericaexon
TCONS_00062219-exon-scaffold_362-1575043694:994772..994858TCONS_00062219-exon-scaffold_362-1575043694:994772..994858Clytia hemisphaericaexon
TCONS_00062219-exon-scaffold_362-1491911889:996044..996134TCONS_00062219-exon-scaffold_362-1491911889:996044..996134Clytia hemisphaericaexon
TCONS_00062219-exon-scaffold_362-1510915933:996044..996134TCONS_00062219-exon-scaffold_362-1510915933:996044..996134Clytia hemisphaericaexon
TCONS_00062219-exon-scaffold_362-1575043694:996044..996134TCONS_00062219-exon-scaffold_362-1575043694:996044..996134Clytia hemisphaericaexon
TCONS_00062219-exon-scaffold_362-1491911889:996831..996914TCONS_00062219-exon-scaffold_362-1491911889:996831..996914Clytia hemisphaericaexon
TCONS_00062219-exon-scaffold_362-1510915933:996831..996914TCONS_00062219-exon-scaffold_362-1510915933:996831..996914Clytia hemisphaericaexon
TCONS_00062219-exon-scaffold_362-1575043694:996831..996914TCONS_00062219-exon-scaffold_362-1575043694:996831..996914Clytia hemisphaericaexon
TCONS_00062219-exon-scaffold_362-1491911889:997095..997148TCONS_00062219-exon-scaffold_362-1491911889:997095..997148Clytia hemisphaericaexon
TCONS_00062219-exon-scaffold_362-1510915933:997095..997148TCONS_00062219-exon-scaffold_362-1510915933:997095..997148Clytia hemisphaericaexon
TCONS_00062219-exon-scaffold_362-1575043694:997095..997148TCONS_00062219-exon-scaffold_362-1575043694:997095..997148Clytia hemisphaericaexon
TCONS_00062219-exon-scaffold_362-1491911889:997511..997660TCONS_00062219-exon-scaffold_362-1491911889:997511..997660Clytia hemisphaericaexon
TCONS_00062219-exon-scaffold_362-1510915933:997511..997660TCONS_00062219-exon-scaffold_362-1510915933:997511..997660Clytia hemisphaericaexon
TCONS_00062219-exon-scaffold_362-1575043694:997511..997660TCONS_00062219-exon-scaffold_362-1575043694:997511..997660Clytia hemisphaericaexon
TCONS_00062219-exon-scaffold_362-1491911889:998067..1001884TCONS_00062219-exon-scaffold_362-1491911889:998067..1001884Clytia hemisphaericaexon
TCONS_00062219-exon-scaffold_362-1510915933:998067..1001884TCONS_00062219-exon-scaffold_362-1510915933:998067..1001884Clytia hemisphaericaexon
TCONS_00062219-exon-scaffold_362-1575043694:998067..1001884TCONS_00062219-exon-scaffold_362-1575043694:998067..1001884Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_362supercontigscaffold_362:994365..1001884 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.315879	0.60807	0.0195147	0.0630979	0	0	0	0	0.111382	0	0	0.0677606	0.152424	0.045126	0.0616657	0.174454	1.02187	0.990991	0	0	0.823982	1.21531	0.445658	0.412995	0	0.186469	0.0793113	0	0.216851	0.10518
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000832GPCR_2_secretin-like
IPR017981GPCR_2-like
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0004930G-protein coupled receptor activity
GO:0004888transmembrane signaling receptor activity
Vocabulary: Biological Process
TermDefinition
GO:0007186G-protein coupled receptor signaling pathway
GO:0007166cell surface receptor signaling pathway
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007166 cell surface receptor signaling pathway
biological_process GO:0007186 G-protein coupled receptor signaling pathway
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0004930 G-protein coupled receptor activity
molecular_function GO:0004888 transmembrane signaling receptor activity
Blast
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BLAST of TCONS_00062219 vs. Swiss-Prot (Human)
Match: HEMK2 (HemK methyltransferase family member 2 OS=Homo sapiens GN=N6AMT1 PE=1 SV=4)

HSP 1 Score: 135.576 bits (340), Expect = 9.448e-35
Identity = 63/131 (48.09%), Postives = 86/131 (65.65%), Query Frame = 2 
Query:  134 IALEMGPGSGIIITFLAKNIAPHIACFASDINSHASYCTRKTSLENGVAVEVTTDNLIGSFQKRLHNKVDILIFNPPYVVTPSAEVGTYDLSASWAGGVNGREVIDKFLPLVPELLSKNGFLYLLXISSSH 526
            I LE+G GSG++  FLA  I P      +DIN  A+ CT +T+  N V ++    +L+     RL  KVD+L+FNPPYVVTP  EVG++ + A+WAGG NGREV+D+F PLVP+LLS  G  YL+ I  ++
Sbjct:   48 ICLEVGSGSGVVSAFLASMIGPQALYMCTDINPEAAACTLETARCNKVHIQPVITDLVKGLLPRLTEKVDLLVFNPPYVVTPPQEVGSHGIEAAWAGGRNGREVMDRFFPLVPDLLSPRGLFYLVTIKENN 178
The following BLAST results are available for this feature:
BLAST of TCONS_00062219 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
HEMK29.448e-3548.09HemK methyltransferase family member 2 OS=Homo sap... [more]
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