|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00062219 ID=TCONS_00062219|Name=TCONS_00062219|organism=Clytia hemisphaerica|type=transcript|length=4410bp aagaCATGTTAACAAAGCCATGACACGCCACCCGCTAGAGCAGAGAGGAT CAGAGCTGCGGCGACTGTGTGTTCAATTAAAAATCCTACCTTTAGTTTAT TACACAACCTCTTGCAGCTAACTCAGGCCAATTATTGCCTTGGAGATGGG ACCTGGATCAGGGATTATCATAACATTTCTTGCCAAGAATATTGCACCAC ACATTGCCTGCTTTGCAAGTGACATTAATTCCCATGCATCATATTGTACA AGAAAGACATCACTTGAAAATGGTGTTGCTGTTGAAGTGACAACTGATAA TTTGattggaagttttcaaaaaagattgcATAACAAAGTTGACATCTTGA TTTTTAATCCACCATATGTAGTAACACCTTCAGCCGAGGTAGGAACTTAT GATTTATCAGCATCTTGGGCTGGTGGAGTCAATGGAAGAGAGGTGATTGA TAAGTTCCTCCCATTGGTTCCGGAGTTGTTATCCAAAAATGGTTTTCTAT ATTTGTTANTGATAAGTTCCTCCCATTGGTTCCGGAGTTGTTATCTAAAA ATGGTTCTCTATATTTGTTAGTACTGGAGCAAAACAAACCAGaCGAAATT GTTGAGATGATGCAGAGTAAATACAATCTACATGCAAGTCTTATAATGAA ACGAAAGGCTGGACCAGAGTATTTAAAAGTATTTCGTTTTGAATTCATAA CATGATTATAGACTTTTGATTACTGACGTTGTTGGACAAGAAGGAGAGAT TGAGAAGTTATCAATTGggaaagaaactttttcaattcATCCCTTGGTGG CAAAAACATTCAAGTTAGGTTTCATAGCGTACCCAATTCCGCCATTTCGA caatttttcctgatttttctgtgatttttgtCTTATCATATAAACAAGAA TAGAAATCTAGCACCGACTATTTCctttaaattcaagatttttgtaaaaa tgtctaGAAATAGACTTTCTTTAAACAGACTTAAACAACCCGATTTTCCA TCTTTGACAAAGTTATCAtgaagcaaagttcagccaaaaatCGACTCTCT AGTAATAAATGAGAGAATTTATCTTGATATGTAAATTAAGTGCTTTAACA CTATATatagaaaaagttaaaattttacaatataTCATTGATAGAATAAG ATTATGAAACAAATTATAACAAGTATTTACAATATTGCGGTAAAAGAACG AAATCGTAAAATCTTGATCACCCAAATGTGTCATCAGCGAACTTAAGTCC CgcgaaatcttgaaattttgcagatgCCGTGAATCGTAAACCCATTAAAA TAGTTTATAGTTTCCAAGTTTTCATTTCTCTGTGATTGACGTTGATTTAG TTTTACTCAACTCAATTTGAGTCTTCTTCCTGTTCTTCCCATAAAGCTGC TGTTTAAATTCAGTTTTTGTGTTCTTGTTCATCGCGTAGAATGCGAAAAT AAACACACCTCGAAAAGATCGTAAAACGTCATAAACCAATCCAAAAACTG CATTGAGAATACTCTCATTTTCTGTCAAGTTAGATCGTTTGATTTGAACT AAACCCAATAATTCTGTTATTCCCAAAATGAGCATTAGTTTAATTCCAAC TTTTAGTAATCCAACGTCTTTATGTTGTCCTTTTCCAAGAGTTTTTTGAG ATTCTCTACTCTTCTTTCTAATGGAAATCAAAAGCATACAAAGACACAAC AAACATGTAAAATACTCAATAGAAGctggaataaaataaaatgccaAAGA CCAATACCAATTTCCGAACCAACAATATTTAGAATCTAACTCAAATACAA TAGAATCAGATTCCTTTAAGATGAGCAGAGTTCCACAAATGATCGTCGAG ATCGCAATAGTTGCAAGCAGTCTCTTTTGAAGCATCTTCACCGATTCCTT TCGATCAGATCTTGACAGAGATCTCTTGGTAAACTGCAACATCATATCAA TGGCAACCATTCCActccaaatcaaaacattgaccaaAGACCAATACAAA ACCACAAAAATCCCTGTACAAGACAAAGAGCCTTTCCTTAAATGAAAATT AGCAAGGAACATTGAATCACTGAATAGCAAAAAGGCAACAAGAACAGTAA TATATAAACCACCAGTGTTTCTCAAGCTTTTTATTGCAGCCAAGGTAACG AGGAACATGAGGTATGAAAACAAGCTGAAACATGTTCCAATAACCGagac atgatattttgcatttttaacagttttggACCAATCAAATTCCTGTTGAG TCATTCCACTGCGAATAGCTTCGATGCATATTTGAAAACCTTCTGCAAGT GGAAAATATTCATCAATGGGATAGACTTTTTGTTTTGCAGATTTTGGAGA TTCCCCTTCAATCAGTAAAGATCCATTTGGAGATATTTGATAGATTGATG GGTATATTGTTTGTCTTGAACACGTTGAGTGCAAATGAAATGCCTCACAG TAGATTTTCTCTTCAAAGACGATCCCATCCTGTATTGTGAATATTAGTTT TGAATCCAGATTATAATCAACTGTTTTTGTCATGTTACAAGTTCGATTTG CATTGTGAATAACTTCGTCAGTGAATCTACCACAGAGTCTGTAGTTACTG AAAGATCTAGTCAAATCGAACCCATATTGATTTGGAATGATTTGATCATG AAATTTGATTGTTGTGGTAAGAACAGCTTTATCAATATGTTTGTTATAAC GTGTTTCGTTAAGGAGATTTTCCTTCCATTTTAAATCAGATTCAAAATCT GTTGATTCCAAAACGAAAACAGTTTGATTTTCATACAAGACTCTCCAATT ACTTCTGcgaagaaaattgaaaagtgTTGAATAATTTGTTTCGTTGGTGA CATTGTTATTTGTGTTGATTTGGAAGAAGATGAATAAAGAAATTGCTTGA TGGATCTGATCCAAGCATCGGAATGATTGTTGATTGTTTTGGCGCTCACC GTCGACCATGGGCCGtcttgtatttgtttgatttgacTTGATTGGTTCGG TGGTCGTATTTCTGAAAGATTGGCATTTATGGGTTTTTGATGAGTGAGAA AATCCTCCATTACAACTTCTGCAATATCCAGTAGAATCGATGAATTTAGG TGTCAAACATTCacatttgccgttcgattgtcTATCAAATCCCATTCTGC ACGGTAATGGTTTGCATTTATTTTCAGTGGTTGAGAATGTGTATCCAATC TGGCAAATTTGTTGACATTGTCCTTGGACAAGACGTTGCCCTTGACCACA TTGGATGGCTCTACACAGCCCGCCTGCCATTTTGATCTCGTTCAGACCGC ATTTGTTATCACTGATCCCACTATTTAGATTGATGACCAGGGACCATCCA TCAGGCATTGACTTACATGGTTTTCTCACTGTACCATCTAAAAGATTCTG AGAACgacatttttcacaaaaaacatttttggtagATTTAGTTGTATATT TTCCATTGAAGAAATACCCTAAAAAGATTTGACAAAATATTGCATCTGTG GTGCTACATTTGTTTGGTTCACACTTCAAAATTGTATCTTCATATTGAGG AACTAATCCACACCAAGGGTATTTCTGCAGGACTTGATAAAAAGGTGTGT CTGCCAATAAATATTGATCTGGATACTTGTTGCGCGAGACAGAAACCTTG CAAGACAGTTTCATGAAATCATATCGATAAAGAAAAACATTATTACACCG TGCGCAGTATGAGTTCTTATATAAATAACGATCATTACCATAAACTGGCT TATTATTTTCACCAACTACTGTAGCCTTCTCACAACCATCAACATATGTT TGATTGGCCCCTGGCAAGCAAGAATCAACCATGATATAGTGATTACCAGA CCAAAGGGACATATCTGGAACATATCTAAACATTGGTAAACACGATTGTC CTTTAGTTAAACTCTTTACACTCTCGATGTAATGTTTGGCACTAGATTGA AATTGGTGATATTTATACCATAAGAAATCAATACAACAGTCACCCTTGGA TATGCAAGATTCGCCACAGCTACATTCACCAGGGCGTGTCCATATTCGGC ATTGGTAACCATACCAACCAATATCAATTCCAATATTTAATTGCTTTAAG AAGCTGCTCAATGGAAACGGATTGTCATATCctggttttgtttttgttaa agATGGAAGCCTATCGCTATCATAACATTTCATCAGATAGTTTCTAAACT TCGTAGATGAAGTGGAGTGTGGACTATGAGTGTACCCTCCACCGCCGTAC TGTCCTGAAAACGTCGAATGAGTAGTGCCGGGGGTCGTGTAAACACCCCA TGTAAATACCAGAGTCGTTGTGTTGATTAAGAAGTATAATTTAAGCAGAG TCTTGAGTAGAGTCATCGCTTTTTCGTATCGTCTTTGTTTGTCTTCAATA GGAttctatt Run BLAST on NCBI transcript from alignment at scaffold_362:994365..1001884+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00062219 ID=TCONS_00062219|Name=TCONS_00062219|organism=Clytia hemisphaerica|type=transcript|length=7520bp|location=Sequence derived from alignment at scaffold_362:994365..1001884+ (Clytia hemisphaerica) aagaCATGTTAACAAAGCCATGACACGCCACCCGCTAGAGCAGAGAGGAT
CAGAGCTGCGGCGACTGTGTGTTCAATTAAAAATCCTACCTTTAGTTTAT
TACACAACCTCTTGCAGCTAACTCAGGTGAGTTAACGAAGTCCAAAACCT
ATTTCTTAATTTCCCCAGCGCTTCCCATTGTTACTTAATTCTCATATATA
GCTCTCAAAAGAAGTGTATTAACGTCACGGAAAGTGCACAGGGTCAAAGA
TTTAAATTAAGCTGATTTCAAGATAttggccaaaaactgattttgatgTC
ATAGAGGTAAGATTCAAaggacgtcattattgaaataGGTTATGGACTTG
CCTTAACTAACCTGAGAATGCAAATGCCTtatgaaaatcattttttttat
caCATAGGCCAATTATTGCCTTGGAGATGGGACCTGGATCAGGGATTATC
ATAACATTTCTTGCCAAGAATATTGCACCACACATTGCCTGCTTGTAAGT
TTGATACAGTATTTCatatatatttatatttatttattcagGTGTCATAC
ATACAGTACCTAattttttaagataaaaccttCCTAGAGAAAGAAAAATC
GTAAAGGGAATGGTAAATTATTAGTTCTTCATTTGTTTCAATTGAcaaac
acatatttttttcaacACTGTAAACTTATCTCATATTGACAATCCCCATC
TAATTCCTTCAACCTCGTTTAGAGATGGAAATAATAGAGAGGTTGGAATC
GCTGATCAAAACTTTATACCCTTGTTCACCAGTTCGCAGTTAGACAGGCC
TTCCTATTGTAGATCTTTTACTAACTAGGATACCATGTATATTCCTCCTT
AAGGAATTTTACTTATTCGACAGTGCAAGTGACATTAATTCCCATGCATC
ATATTGTACAAGAAAGACATCACTTGAAAATGGTGTTGCTGTTGAAGTGA
CAACTGATAATTTGGTAAGTACCTGAATTATTATCTATACAGTAAACCTC
CAATTAACGAACTCTCTAAAAAAGGCtgtgattagcggacaattttaTTT
CCCTGGCCATTTCCTATTCAAATCCTTgtgaaaaagtttccaaaagatGG
ACACTCAGGGGACTCTCCAATAAgcggacaaagtttttgcacaAAATGGC
CAAACCCCCACTTTTCCTTTCTAATTTGCGGACATTCGAGGTCTTACTGG
TCACAGACTAGAGCTTGGGAGCACTCCCTTTATCCAGTCGTTGAATTTGC
ATACgttataaaaatgataaattacaGGGACCTCAAGACTACTTTGATTA
ATgaaaaactaaattgttgcaCTTGAATAATCATTCTCGTGTTTTTCCAT
GTCCTAGTGTCTCTAGAAAAGCACGGATCAAAATGTTACATACTTAGGNA
AAAATCGTAAAGGGAATGGTAAATTATTAGTTCTTCATTTGTTTCAATTG
AcaaacacatatttttttcaacACTGTAAACTTATCTCATATTGACAATC
CCCATCTAATTCCTTCAACCTCGTTTAGAGATGGAAATAATAGAGAGGTT
GGAATCGCTGATCAAAACTTTATACCCTTGTTCACCAGTTCGCAGTTAGA
CAGGCCTTCCTATTGTAGATCTTTTACTAACTAGGATACCATGTATATTC
CTCCTTAAGGAATTTTACTTATTCGACAGTGCAAGTGACATTAATTCCCA
TGCATCATATTGTACAAGAAAGACATCACTTGAAAATGGTGTTGCTGTTG
AAGTGACAACTGATAATTTGGTAAGTACCTGAATTATTATCTATACAGTA
AACCTCCAATTAACGAACTCTCTAAAAAGGGCTGTGATTAACGGACAATT
TTATATCCCTGGCCATTTCCTATTCAAATCCTTgtgaaaaagtttccaaa
agatGGACACTTAGGGGACTCTCCAATAAgcggacaaagtttttgcacaA
AATGGCCAAACCCCCACTTTTCCTCTCTAATTTGCGGACATTCGAGGTCT
TACTGGTCACAGACTAGAGCTTGGGAGCACTCCCTTTATCCAGTTGTTGA
ATTTGCATACgttataaaaatgataaattacaGGGACCTCAAGACTACTT
TGATTCATgaaaaactaaattgttgcaCTTGAATAATTTTTCCATGTCCT
AGTGTCTCTAGAAAAGCACGGATCAAAATGTTACATACTTAACCCCTTAA
TAGTACCTTATACCAAAATTAGAGCACATAATTAACaggtttctaaaagg
cggacacttctaattagcggacactgaCCCTATTCCCCGacggtgtccgc
taattagaggttccactgtattcCATAATTTTTCCTATTTATTTCTTCTG
AACTTGTTTTAATTCATCTCTCTTTAACCATATTATTTGGTTATGTTAGA
CTTTTTTAATGTGGTTTACAAATAAAGCTGGTTTATTAAatgttgttatt
atttttgaatttccagattggaagttttcaaaaaagattgcATAACAAAG
TTGACATCTTGATTTTTAATCCACCATATGTAGTAACACCTTCAGCCGAG
GTTAGTAAacatatttttattgtttttttggttGTTTAAAAATTTGATGT
ATGCTGTTTGTTATTGTTCTCTTTTTGATTTTCTGCATATTAAAAAAGAA
GTAATGTTTGATAcaatgaaaaaagtaaaataaagaaCCTAGAAAAGGCA
GAAATCATTACAATAATTTCTATTCAATAGGTAGGAACTTATGATTTATC
AGCATCTTGGGCTGGTGGAGTCAATGGAAGAGAGGTGAGTAATGTCttct
ttatttaaaagaaataccttAACTCATTTAAAAAAGGTAAATGCCTCCCC
TTGAATCCTCTCTTTTACAGTCAGAAAATCTCAATATAAATTTATATTCT
CaacatatatttttatttaaattacaaaatgaattttcccaaaaaccaAA
GCAACAGTGATAGATCTTGCACCATCTTTCTGAAGGTGTTTCTCTCGAAT
TGAATGTATCCTTCTAGGTGGTGGATAATTCTCAATTTTTAGCTCGTAGC
TTTGATTCCCGTATTCTTCTAGGTGGTGGATAATTCTCAATTTTTAGCTC
GTAGCTTTGATTCCCTTTGGACAACTTTaaccattttattttatagGTGA
TTGATAAGTTCCTCCCATTGGTTCCGGAGTTGTTATCCAAAAATGGTTTT
CTATATTTGTTANTGATAAGTTCCTCCCATTGGTTCCGGAGTTGTTATCT
AAAAATGGTTCTCTATATTTGTTAGTACTGGAGCAAAACAAACCAGGTAT
AATATGATAATTGCTCTGAACTCTGAACTCAATTTCTTTTAAAGTGAcat
aaaatcacaaaatatttgaaaggtTTCATAGTAACAAATCCTATTTCTAT
TAGAATCAGAAATTTATCCAATTAAATGTTtcgtaggctgctggcatcca
ctaacggattcgtgctccttatactacctgggggttttgtagaggtctgc
gattcagactacttGTTTCGCAACATTAACAACATTCgttatttttgaaa
agagcTCAGAGctctaaaaaaaaatcaaactcaagATTTCAAAAACCACA
CGCCGACAGAAAAATTCTGTGCAGTAATGTTGATTTTCACACGCGtgtga
tttattgattttttcctgtgattttaataaatgcattttttttttacctt
agaCGAAATTGTTGAGATGATGCAGAGTAAATACAATCTACATGCAAGTC
TTATAATGAAACGAAAGGCTGGACCAGAGTATTTAAAAGTATTTCGTTTT
GAATTCATAACATGATTATAGACTTTTGATTACTGACGTTGTTGGACAAG
AAGGAGAGATTGAGAAGTTATCAATTGggaaagaaactttttcaattcAT
CCCTTGGTGGCAAAAACATTCAAGTTAGGTTTCATAGCGTACCCAATTCC
GCCATTTCGAcaatttttcctgatttttctgtgatttttgtCTTATCATA
TAAACAAGAATAGAAATCTAGCACCGACTATTTCctttaaattcaagatt
tttgtaaaaatgtctaGAAATAGACTTTCTTTAAACAGACTTAAACAACC
CGATTTTCCATCTTTGACAAAGTTATCAtgaagcaaagttcagccaaaaa
tCGACTCTCTAGTAATAAATGAGAGAATTTATCTTGATATGTAAATTAAG
TGCTTTAACACTATATatagaaaaagttaaaattttacaatataTCATTG
ATAGAATAAGATTATGAAACAAATTATAACAAGTATTTACAATATTGCGG
TAAAAGAACGAAATCGTAAAATCTTGATCACCCAAATGTGTCATCAGCGA
ACTTAAGTCCCgcgaaatcttgaaattttgcagatgCCGTGAATCGTAAA
CCCATTAAAATAGTTTATAGTTTCCAAGTTTTCATTTCTCTGTGATTGAC
GTTGATTTAGTTTTACTCAACTCAATTTGAGTCTTCTTCCTGTTCTTCCC
ATAAAGCTGCTGTTTAAATTCAGTTTTTGTGTTCTTGTTCATCGCGTAGA
ATGCGAAAATAAACACACCTCGAAAAGATCGTAAAACGTCATAAACCAAT
CCAAAAACTGCATTGAGAATACTCTCATTTTCTGTCAAGTTAGATCGTTT
GATTTGAACTAAACCCAATAATTCTGTTATTCCCAAAATGAGCATTAGTT
TAATTCCAACTTTTAGTAATCCAACGTCTTTATGTTGTCCTTTTCCAAGA
GTTTTTTGAGATTCTCTACTCTTCTTTCTAATGGAAATCAAAAGCATACA
AAGACACAACAAACATGTAAAATACTCAATAGAAGctggaataaaataaa
atgccaAAGACCAATACCAATTTCCGAACCAACAATATTTAGAATCTAAC
TCAAATACAATAGAATCAGATTCCTTTAAGATGAGCAGAGTTCCACAAAT
GATCGTCGAGATCGCAATAGTTGCAAGCAGTCTCTTTTGAAGCATCTTCA
CCGATTCCTTTCGATCAGATCTTGACAGAGATCTCTTGGTAAACTGCAAC
ATCATATCAATGGCAACCATTCCActccaaatcaaaacattgaccaaAGA
CCAATACAAAACCACAAAAATCCCTGTACAAGACAAAGAGCCTTTCCTTA
AATGAAAATTAGCAAGGAACATTGAATCACTGAATAGCAAAAAGGCAACA
AGAACAGTAATATATAAACCACCAGTGTTTCTCAAGCTTTTTATTGCAGC
CAAGGTAACGAGGAACATGAGGTATGAAAACAAGCTGAAACATGTTCCAA
TAACCGagacatgatattttgcatttttaacagttttggACCAATCAAAT
TCCTGTTGAGTCATTCCACTGCGAATAGCTTCGATGCATATTTGAAAACC
TTCTGCAAGTGGAAAATATTCATCAATGGGATAGACTTTTTGTTTTGCAG
ATTTTGGAGATTCCCCTTCAATCAGTAAAGATCCATTTGGAGATATTTGA
TAGATTGATGGGTATATTGTTTGTCTTGAACACGTTGAGTGCAAATGAAA
TGCCTCACAGTAGATTTTCTCTTCAAAGACGATCCCATCCTGTATTGTGA
ATATTAGTTTTGAATCCAGATTATAATCAACTGTTTTTGTCATGTTACAA
GTTCGATTTGCATTGTGAATAACTTCGTCAGTGAATCTACCACAGAGTCT
GTAGTTACTGAAAGATCTAGTCAAATCGAACCCATATTGATTTGGAATGA
TTTGATCATGAAATTTGATTGTTGTGGTAAGAACAGCTTTATCAATATGT
TTGTTATAACGTGTTTCGTTAAGGAGATTTTCCTTCCATTTTAAATCAGA
TTCAAAATCTGTTGATTCCAAAACGAAAACAGTTTGATTTTCATACAAGA
CTCTCCAATTACTTCTGcgaagaaaattgaaaagtgTTGAATAATTTGTT
TCGTTGGTGACATTGTTATTTGTGTTGATTTGGAAGAAGATGAATAAAGA
AATTGCTTGATGGATCTGATCCAAGCATCGGAATGATTGTTGATTGTTTT
GGCGCTCACCGTCGACCATGGGCCGtcttgtatttgtttgatttgacTTG
ATTGGTTCGGTGGTCGTATTTCTGAAAGATTGGCATTTATGGGTTTTTGA
TGAGTGAGAAAATCCTCCATTACAACTTCTGCAATATCCAGTAGAATCGA
TGAATTTAGGTGTCAAACATTCacatttgccgttcgattgtcTATCAAAT
CCCATTCTGCACGGTAATGGTTTGCATTTATTTTCAGTGGTTGAGAATGT
GTATCCAATCTGGCAAATTTGTTGACATTGTCCTTGGACAAGACGTTGCC
CTTGACCACATTGGATGGCTCTACACAGCCCGCCTGCCATTTTGATCTCG
TTCAGACCGCATTTGTTATCACTGATCCCACTATTTAGATTGATGACCAG
GGACCATCCATCAGGCATTGACTTACATGGTTTTCTCACTGTACCATCTA
AAAGATTCTGAGAACgacatttttcacaaaaaacatttttggtagATTTA
GTTGTATATTTTCCATTGAAGAAATACCCTAAAAAGATTTGACAAAATAT
TGCATCTGTGGTGCTACATTTGTTTGGTTCACACTTCAAAATTGTATCTT
CATATTGAGGAACTAATCCACACCAAGGGTATTTCTGCAGGACTTGATAA
AAAGGTGTGTCTGCCAATAAATATTGATCTGGATACTTGTTGCGCGAGAC
AGAAACCTTGCAAGACAGTTTCATGAAATCATATCGATAAAGAAAAACAT
TATTACACCGTGCGCAGTATGAGTTCTTATATAAATAACGATCATTACCA
TAAACTGGCTTATTATTTTCACCAACTACTGTAGCCTTCTCACAACCATC
AACATATGTTTGATTGGCCCCTGGCAAGCAAGAATCAACCATGATATAGT
GATTACCAGACCAAAGGGACATATCTGGAACATATCTAAACATTGGTAAA
CACGATTGTCCTTTAGTTAAACTCTTTACACTCTCGATGTAATGTTTGGC
ACTAGATTGAAATTGGTGATATTTATACCATAAGAAATCAATACAACAGT
CACCCTTGGATATGCAAGATTCGCCACAGCTACATTCACCAGGGCGTGTC
CATATTCGGCATTGGTAACCATACCAACCAATATCAATTCCAATATTTAA
TTGCTTTAAGAAGCTGCTCAATGGAAACGGATTGTCATATCctggttttg
tttttgttaaagATGGAAGCCTATCGCTATCATAACATTTCATCAGATAG
TTTCTAAACTTCGTAGATGAAGTGGAGTGTGGACTATGAGTGTACCCTCC
ACCGCCGTACTGTCCTGAAAACGTCGAATGAGTAGTGCCGGGGGTCGTGT
AAACACCCCATGTAAATACCAGAGTCGTTGTGTTGATTAAGAAGTATAAT
TTAAGCAGAGTCTTGAGTAGAGTCATCGCTTTTTCGTATCGTCTTTGTTT
GTCTTCAATAGGAttctatt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00062219-exon-scaffold_362-1491911889:994365..994490 | TCONS_00062219-exon-scaffold_362-1491911889:994365..994490 | Clytia hemisphaerica | exon |
TCONS_00062219-exon-scaffold_362-1510915933:994365..994490 | TCONS_00062219-exon-scaffold_362-1510915933:994365..994490 | Clytia hemisphaerica | exon |
TCONS_00062219-exon-scaffold_362-1575043694:994365..994490 | TCONS_00062219-exon-scaffold_362-1575043694:994365..994490 | Clytia hemisphaerica | exon |
TCONS_00062219-exon-scaffold_362-1491911889:994772..994858 | TCONS_00062219-exon-scaffold_362-1491911889:994772..994858 | Clytia hemisphaerica | exon |
TCONS_00062219-exon-scaffold_362-1510915933:994772..994858 | TCONS_00062219-exon-scaffold_362-1510915933:994772..994858 | Clytia hemisphaerica | exon |
TCONS_00062219-exon-scaffold_362-1575043694:994772..994858 | TCONS_00062219-exon-scaffold_362-1575043694:994772..994858 | Clytia hemisphaerica | exon |
TCONS_00062219-exon-scaffold_362-1491911889:996044..996134 | TCONS_00062219-exon-scaffold_362-1491911889:996044..996134 | Clytia hemisphaerica | exon |
TCONS_00062219-exon-scaffold_362-1510915933:996044..996134 | TCONS_00062219-exon-scaffold_362-1510915933:996044..996134 | Clytia hemisphaerica | exon |
TCONS_00062219-exon-scaffold_362-1575043694:996044..996134 | TCONS_00062219-exon-scaffold_362-1575043694:996044..996134 | Clytia hemisphaerica | exon |
TCONS_00062219-exon-scaffold_362-1491911889:996831..996914 | TCONS_00062219-exon-scaffold_362-1491911889:996831..996914 | Clytia hemisphaerica | exon |
TCONS_00062219-exon-scaffold_362-1510915933:996831..996914 | TCONS_00062219-exon-scaffold_362-1510915933:996831..996914 | Clytia hemisphaerica | exon |
TCONS_00062219-exon-scaffold_362-1575043694:996831..996914 | TCONS_00062219-exon-scaffold_362-1575043694:996831..996914 | Clytia hemisphaerica | exon |
TCONS_00062219-exon-scaffold_362-1491911889:997095..997148 | TCONS_00062219-exon-scaffold_362-1491911889:997095..997148 | Clytia hemisphaerica | exon |
TCONS_00062219-exon-scaffold_362-1510915933:997095..997148 | TCONS_00062219-exon-scaffold_362-1510915933:997095..997148 | Clytia hemisphaerica | exon |
TCONS_00062219-exon-scaffold_362-1575043694:997095..997148 | TCONS_00062219-exon-scaffold_362-1575043694:997095..997148 | Clytia hemisphaerica | exon |
TCONS_00062219-exon-scaffold_362-1491911889:997511..997660 | TCONS_00062219-exon-scaffold_362-1491911889:997511..997660 | Clytia hemisphaerica | exon |
TCONS_00062219-exon-scaffold_362-1510915933:997511..997660 | TCONS_00062219-exon-scaffold_362-1510915933:997511..997660 | Clytia hemisphaerica | exon |
TCONS_00062219-exon-scaffold_362-1575043694:997511..997660 | TCONS_00062219-exon-scaffold_362-1575043694:997511..997660 | Clytia hemisphaerica | exon |
TCONS_00062219-exon-scaffold_362-1491911889:998067..1001884 | TCONS_00062219-exon-scaffold_362-1491911889:998067..1001884 | Clytia hemisphaerica | exon |
TCONS_00062219-exon-scaffold_362-1510915933:998067..1001884 | TCONS_00062219-exon-scaffold_362-1510915933:998067..1001884 | Clytia hemisphaerica | exon |
TCONS_00062219-exon-scaffold_362-1575043694:998067..1001884 | TCONS_00062219-exon-scaffold_362-1575043694:998067..1001884 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_362 | supercontig | scaffold_362:994365..1001884 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Cellular Component
Term | Definition |
GO:0016021 | integral component of membrane |
Vocabulary: Molecular Function
Term | Definition |
GO:0004930 | G-protein coupled receptor activity |
GO:0004888 | transmembrane signaling receptor activity |
Vocabulary: Biological Process
Term | Definition |
GO:0007186 | G-protein coupled receptor signaling pathway |
GO:0007166 | cell surface receptor signaling pathway |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category |
Term Accession |
Term Name |
biological_process |
GO:0007166 |
cell surface receptor signaling pathway |
biological_process |
GO:0007186 |
G-protein coupled receptor signaling pathway |
cellular_component |
GO:0016021 |
integral component of membrane |
molecular_function |
GO:0004930 |
G-protein coupled receptor activity |
molecular_function |
GO:0004888 |
transmembrane signaling receptor activity |
Blast
BLAST of TCONS_00062219 vs. Swiss-Prot (Human)
Match: HEMK2 (HemK methyltransferase family member 2 OS=Homo sapiens GN=N6AMT1 PE=1 SV=4) HSP 1 Score: 135.576 bits (340), Expect = 9.448e-35 Identity = 63/131 (48.09%), Postives = 86/131 (65.65%), Query Frame = 2
Query: 134 IALEMGPGSGIIITFLAKNIAPHIACFASDINSHASYCTRKTSLENGVAVEVTTDNLIGSFQKRLHNKVDILIFNPPYVVTPSAEVGTYDLSASWAGGVNGREVIDKFLPLVPELLSKNGFLYLLXISSSH 526
I LE+G GSG++ FLA I P +DIN A+ CT +T+ N V ++ +L+ RL KVD+L+FNPPYVVTP EVG++ + A+WAGG NGREV+D+F PLVP+LLS G YL+ I ++
Sbjct: 48 ICLEVGSGSGVVSAFLASMIGPQALYMCTDINPEAAACTLETARCNKVHIQPVITDLVKGLLPRLTEKVDLLVFNPPYVVTPPQEVGSHGIEAAWAGGRNGREVMDRFFPLVPDLLSPRGLFYLVTIKENN 178
The following BLAST results are available for this feature:
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