TCONS_00062209 (transcript) - C. hemisphaerica

Overview
NameTCONS_00062209
Unique NameTCONS_00062209
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1615

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00062209 ID=TCONS_00062209|Name=TCONS_00062209|organism=Clytia hemisphaerica|type=transcript|length=1615bp
TTCAGTTTTAGATAAATGTaaagaatatcaaaaataaataaagatgGTAA
TTCATGACTTTTACTCGTAAATGTTTGGTGCCCTGGTTCAAAACAAGGGT
ACCAGGTTTCAAATGCAGGTCTATTTGGAATATGTTTGATGATTGTGTGG
ACAATACTTTTCTGGATTTAATACATCAAGATGAAACATAATATCTGCAT
GGTATCCGACTTCTTTTATCCCAATATGGGAGGCGTTGAAAGTCACATTT
ATCAACTATCACAATGTCTACTTGCAAGAGGACACAAGGTAATCGTTGTC
ACACACGCTTATGGTAATCGAAAAGGAGTTCGCTATCTGACCAATAATCT
CAAGGTATATTACTTACCATTCAGTATCATGTACATCAATGTCATTCAAC
CGACTGGTTTTGTCACTCTACCAATGTTTCGTGATATCTTTATCCGTGAG
AAGATCACCATCGTTCATGGACACTCAGCATTCTCAGTTCTCTGTCAAGA
GTCAATCATGCATGGTAAATCGATGGGATTAAAGACAGTCTTCACGGATC
ATTCGCTGTTTggatttgctgatgtcagctcTATTTTAACCAATAAGCTT
CTTGAGTTTACTTTGACGGATATCGATCACGTGATTTGTGTTTCAAACAC
AAGCAAAGAGAATACCGTATTACGGGCATCCATACATCCGGATAAAGTTT
CAGTCATTGCAAATGCTGTTGATTCTGATGTCTTCACACCGGATCCAACA
AAAAAAGATGCCAGTAAAATAACGATCGCAGTAGCAAGCCGACTTGTATA
TCGCAAAGGGATTGACTTGTTGGCTGGCGTTATTCCTATTCTCTGTCAGA
AATTTCCTCAAGTCCAATTCATTATCGGTGGTGATGGGCCAAAACGTATT
TTATTGGAAGAAGTCCGAGAAAAATACCAACTTCATGAGAGAGTGCAATT
GCTGGGTGAACTTAAGCATAAAGATGTGAGAAATTTGCTTGTACAAGGAG
ACATCTTTCTTAACACGTCGCTGACCGAAGCTTTTTGTATTGCAATTGTA
GAAGCCGCATCTTGTGGCTTGCAAGTAGTAAGCACCAACGTTGGGGGTGT
TTTTGAAGTATTACCTTCAGACATGATATATTTGGCTGAGCCAAGCGTGC
AAGATATCACACGTGTTATGGAACAAGCAATCAGTGATCGTCTTAAAGGT
CACGTGATTGATCCTTTTGTTCTCAATCAACGAATCAAATCGATGTACAC
GTGGCAAAATGTCTCAAGAAAGACAGAAACTGTGTACGATTCGATCAGTA
ACAATGTCGAGTTATCCATCATGGAACGTCTCGAAAGGTTTGAAGGTCGA
GCTGTGATTGCTGGCAAGTTTTATGTGTTCACCGTATTCGTggatttgtt
gtttttgttcattcttgaTTGGCTGTACCCAAGAGATGAATCTCAAAACC
ACGATACGAAGACAGCAAGGCAATCTGATCGAAAGAAGTTTTCTTGACGA
CAATTAGAAGGATGATTGACTGAATCGTTTTGTGTATTctcattttgtta
tttttcacaACAGGGCCCTTCGTCTACTTGTATATATtaggttttagatt
ttttaaagattttat
Run BLAST on NCBI

transcript from alignment at scaffold_362:733540..751987+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00062209 ID=TCONS_00062209|Name=TCONS_00062209|organism=Clytia hemisphaerica|type=transcript|length=18448bp|location=Sequence derived from alignment at scaffold_362:733540..751987+ (Clytia hemisphaerica)
TTCAGTTTTAGATAAATGTaaagaatatcaaaaataaataaagatgGTAA
TTCATGACTTTTACTCGTAAATGTTTGGTGCCCTGGTTCAAAACAAGGGT
ACCAGGTTTCAAATGCAGGTCTATTTGGAATATGTTTGATGATTGTGTGG
ACAATACTTTTCTGGATTTAATACATCAAGATGAAACATAATATCTGGTA
AGATATTCTCTGTTAAGAATGTTGTCTGTAAATAGACCCGATAGCTacgg
aaattttaaaattaattgcGGTACTATGCCATGTTATATGTGAGATACAT
TCTGGGACTTAATATGAAATCGATTTCACGAGGAATTTTCAGACACAGAA
TCAGACTCTGACATTTGTAGCTAACTAATATTTTCTATGTTTCTTCTATT
CTAGCATGGTATCCGACTTCTTTTATCCCAATATGGGAGGCGTTGAAAGT
CACATTTATCAACTATCACAATGTCTACTTGCAAGAGGACACAAGGTACC
ATTCGTTTATTAAATTAAACCCTTTTCCTTACTTTCTGTACGGAAGAAAA
ACACTAGCTATGATATAGAAAGGAGGCGCAcctttatgctgacaaagcag
aataacCAATATAATTCCTCAAAAATTTTCCTGGTGCGGTGTGGgtactt
tcttttctttaaatatGCTCTGTAAGCAAATGGTAAGAGAAATGTAAAGT
GATGCTCTTTAAGAACCTATTTCCCCCAAACCCATACTTGAGAAAATTCA
Acaagtttttgtaaaatcgctacccctgattgtaaaaaaatgttttctaa
gATGACTATGATGTTATACTATGGTTATTTATTTAGGTAATCGTTGTCAC
ACACGCTTATGGTAATCGAAAAGGAGTTCGCTATCTGACCAATAATCTCA
AGGTACGATGTTTCAAAGCCATAATAAGTAGTTGTAGTTCTTTTTACAAC
CGTCCTTTATAAAATGGTTTAATTCGCCGACACCTCTCTTACTCAGGCAC
actataaattttcaatttatcttTAAATTTGCTTTAAGTAGCCCCATGCA
TCAATCACAAAATCTAGACGGAATCAGTCGAACGAGAATATTAATTGAAC
CGCATTAAAACGCTTTGGTGTTAGGTTAAAAGGCAGTTATTTCCTTCTCT
TACTCCTGcgaatgtttttgttgaaaatatgacgttttactTACTTATCT
GTATGTCTTAACTTTTTCTGCTAATTGCTTTGTTTATTAGTTTAAAGCTG
ATGTCATTTCCATTAGGGGTTTTACNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNAAGGAGACCACACCTTATGAAATATGGCA
CCGAAAGAAACCGGATGTGAGTAATTTGAAAGTTTTCGGATGTAAGTCCT
ACGTACACGTTCCAGATACCAAACACAAAGGAAAGTTCGACAAGAAATCG
ATTTCATGTATATTTGTCGGTTACCCATCAAACGGTTTTAATACTATTAT
ATCCTACAAGACTATAAAAATCTAGTTTAAACTTTATTGGGTTGCAGTTC
AATGATCGAACAACCAGATCATATCATCACACTCGCTATAACCCTTTAGA
GCAAAATGTTTGTAGGGATATGCTATGTAAACATATGTAGAAGATTGAAT
GATGTGTTTTATAACAATATTTTCCCTTCGTCAACGACAGGTATATTACT
TACCATTCAGTATCATGTACATCAATGTCATTCAACCGACTGGTTTTGTC
ACTCTACCAATGTTTCGTGATATCTTTATCCGTGAGAAGATCACCATCGT
TCATGGACACTCAGTAAGTTATCTCATTCACCGATGCTTTATTAAGGATT
TTGCTGTGAACTATTTATTAATATTAAGGAATGCCTACACAAACAATCCA
AGGTTTGTGACGCTCTGGACGATTTGGACTACCGCTTCACTTATCGACCC
TAGGATCTCTTTGTTATCCGTCCAATACTGGGAGAAGagtattttttcat
gatttcatgCCTTTTTATTGTCGTTGGACGTTGAAATAGCATAATAGGTT
TCTTCAATGCTGATAGTGGTCTTTAGGTCTTTGGATATTTCATAAAGCTC
AGTGGACCAAACTTCAAACAGTCACTCCTCaaaattgaatactatccatt
atCTTGTTCAGATCAAGTGTTGATTTAAttgattcgatttttttccCAAA
GGCATTCTCAGTTCTCTGTCAAGAGTCAATCATGCATGGTAAATCGATGG
GATTAAAGACAGTCTTCACGGATCATTCGCTGTTTggatttgctgatgtc
agctcTATTTTAACCAATAAGCTTCTTGAGTTTACTTTGACGGATATCGA
TCACGTGATTTGTGTTTCAAACACAAGGTGAGTTGTTTCATTTATCCtcg
cccagctggcacacaacgttgcttcaacgttcatctaatgttcacaacgt
tcaTATGATAACATTAGATgttaacgttaaaacaacgtcatGTACCGACT
TACCGACTTTCTTTCTTCCAGCTGCCGCAACTTAAGTTTTCaatcttttt
gataattttgatagttttttgATAGCCTAAATACCGAAAATACTCACTAC
TATTAAAACTCGAGAACTAGAAATAGTTGGGCCTTCAGAAAATTTAATTG
GTGGGATAATGTATTACACGACCACTGCGTACTACAGTATTGGCTTTTGG
ATACTTACTGATAGCGCCACGGGAACGAGGTTTTATATCACGATAATTAA
ATCGTCCCACACCATGCTGAAAGCCTTTAATTGCCTAACCTCACCATCTC
ATTATTTACTTTTAACTTTCCAGCAAAGAGAATACCGTATTACGGGCATC
CATACATCCGGATAAAGTTTCAGTCATTGCAAATGCTGTTGATTCTGATG
TCTTCACACCGGATCCAACAAAAAAAGATGCCAGTAAAAGTAAGTACGAT
GATACCATTGACCATTGGTCTGGGCTATATTATATTAGCCATAAGCAGTG
AATTAGTACTACTCAACGTTGGTCATTCTTTAATACGAATGATATTTTCC
GTTGAAAATCACGATGAACTACAGGGTACCTAATTCACTGAAAAACTCTT
AGCAAAGATTTTGGGTAAGCCTGGGGTCGAGGGTGGTGTTGGAATCTCTA
AAAATGGGTTCTAACACGGTTCATACGCCAAAACCAATGAACTTTGTTTT
CTTGCCTAAATCAAAAACTTTCGATTtgaatatttcaactttgaaaaaat
gcaagGCCAAAATTTAagtaggttttttttttaatatcatttaaggtatg
tgtacaccttttttccgatttttttcagtcaaagtggaagaaaagttact
ggatttcattttggtaaaatcgcgatcttaaagtTCGTctttatgatgga
ttatttactcaaataattttctctttcggaaacaacaaagacaaaagaga
gaattcagctgatgtttattctcacctctattgaatagtaatatttttga
cacatttcactgattactcaaataNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNattggctttcagaaaatatatacctttgatatataaaaa
tttgttgttctaaagatatgatcaattaaagagaatgtgtcaagaaaggt
gaacacataccttaaaggaGGTTTTATAGTTAAAGCATATAAGGGAACTT
TACCTCTTTAGTAATAAGCTACAAGAGAGAAATACATCATTGTGTACTCA
TGGGTTTACAACCTAttgttaatttcgcttagcgaaagtattacgatagc
ctttctgcggcggcggcggtgtcatcggaaaaaaaattagaaaacgaaag
tgcttgatacggtggacgaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNagcctcgttgttcttgtaaa
attgtttcatcaaggctcgatgtaaagtagatttcgaattggcttcaatc
tctacttcttgttttttctatGTAGTTTAagttctaggcgaaattttcga
ctttaagtcgtcttgttttcaGTAACGATCGCAGTAGCAAGCCGACTTGT
ATATCGCAAAGGGATTGACTTGTTGGCTGGCGTTATTCCTATTCTCTGTC
AGAAATTTCCTCAAGTCCAATTCATTATCGGTAAACATTAATTCCATACC
TCTATTTATGATACTGTCGGCATTGTCTTGGAAAGAGTGGGGGTCTTAGT
TAGTCAGGGAAAAAACTTCGTCAGCTAGAGacaattttgtcaaattttcc
tggactaaattgtccaaaagaaactttttatttCCATAGCTCGAAAATAA
ATTTCGTATTTCAACGTTttaagcactaatttcggttaataatgGTGTAA
ATTTCTGATAAGATTTCATATTAGCTGGTCGTCTATGAAATAATATTaga
tttgatgaattttagAATAACAATATTGTGAATTTTAGGTGGTGATGGGC
CAAAACGTATTTTATTGGAAGAAGTCCGAGAAAAATACCAACTTCATGAG
AGAGTGCAATTGCTGGGTGAACTTAAGCATAAAGATGTGAGAAATGTAAG
GAATTTTAGAAATAGTGTTTTGAGAATTTCGGAAAGCCTCTAGGCTACTG
GCATTCACTAACGCATTCGTTTTATATGCTACCTGCGGTTTTGGAGAAAG
AGATCTGTGATTGAAACTAGGAGAGCTTCCGTTAAAGCAGAAACCTTCCC
ATNTAGAGAGAGAGATCTGTGATTGAAACTAGGAGAGCTTCGTTAAACCA
GAAACCTTCCCATCGGTCGTAGGTCAGCTTGAAACCACATGGTTTTCGTC
CGACATATCCTCCTTAGAATGAGCTCAAATACTTCACAGGGTTTTAAACC
AGGAACTGAGATTCAAAGTTATTATGTGATCCCCATTCTTAGATAAATCA
GACACGCTCAATAACGAAAGAATTTTCTATTAGTGAAACGAGCTTCACGT
TTGCCTTGTTGCTCTCAGCGCcatgatattcaaaattttcaattttcttg
ggTTTTCAATTTAGTTGCTTGTACAAGGAGACATCTTTCTTAACACGTCG
CTGACCGAAGCTTTTTGTATTGCAATTGTAGAAGCCGCATCTTGTGGGTG
AGTTCAATTTCTCTCGGACTTCAATTGCTAAAATCTTTTTCCTCTCGGGA
ATTTTGCTTTGTCGGATATATATAATTTGGTTAAAACTTTTGATCGGTGT
GAAAACNCGCTTTATTTGGGATATAATTTGGTTAAAACTTTTGATCGGTG
TGAAAACGTTTTAAGCGCAAGGAAGTTGTCAAAAGCTTAGTTTTTCCGAC
TAATGAACTTGcaaattttgatgcttttttttTCTAGTCTTTAGAATTAT
TTCACCCTCGCAAGAAAATGAATCGTTCATTTTAATGACTAGTAAAATGC
ACAACTAAAAGTTGTTACCAAGGATCTCTGGATACACCACTTATTAATTA
AGCTTATTAATCTTATAAACAActtcgaaaaaaattaattcgaTGATATT
TACATTGCTTTTCTTTTCAGCTTGCAAGTAGTAAGCACCAACGTTGGGGG
TGTTTTTGAAGTATTACCTTCAGACATGATATATTTGGCTGAGCCAAGCG
TGCAAGGTAATTCATATTTGGTTTAACCTATTTCCATGTTTAAAATTCAT
TCAACCAGAAACCATTTATAAACCATTATAATTACTCAACAACTCAAATC
AACCATTTGATAAAGGAATTAACAAAATCTACCTCTATTTATAATGGCGa
gtttatatgttttttttttaatatcaggctcgcattatgcttagcattct
attgttctcaaacaatagagccattgtttaggtaccaaaaactgagcctg
catatgcttataaacgttatgcttataaaagaaaaaacatgtatattcGA
GATAATCGAATGAAATGGTATATAGTAAATTTGACTTGTCGCCAAAATCA
CCGttcactttgctcgacgacggtaaaaacacgaAAATGCCGTCGTCTGT
TTAAGTGAACAAAGGCGTTAAAAACCCTaagattgggctattccagaaaa
aaattataccccctatgttgaggagatctttttttttaaatgtgacCGCC
CTggattttttagcaatttttcaggacctcgtttgattttttttctccta
tttctttgaaccaccctggattttttattttccaagccaccctggacgtc
acacctcctcaacatagagGGTACAgattatttctggaatagcccatttt
aagattttgtataGAAGGCTACAGTTACATAACAATCATCTTTATCATCC
GGCTTTCTTTCAAACTACCATGAAAATCCGGTGTTTTGGGCGTAGATTTA
AACAATACATGAGGTGAGATTCAAGTTGTCCATGACCGAGAATATCTTTC
GAAAAGTAATGATATGATAATATCGATCTATTTATGAAACTCCACTTTAA
TCCGACACAGATACTTTCCCCTTTCCAAATTTTAATACTCCTATCTTCAg
caatataccttatcggccaaaacttagtcggccctaagtgactaaatttt
tggATTGGTGAAATAGCTATCTCATGATCTAACATCGAAACCCTATAGGC
GAATCTTCAACTTTTCATAAGCAACAATAGTTGagccttcccagctggca
cacaacgttgtttcaacgttaatctaacgttaaatggacgttgtgaacgt
tagattaacgttgaaacaacgttgtgtgccagctggattTTGATTTACAA
TGGATGGAACCTAGTGGTCGCTGTGTTCTCTTTTTTCTCATATGAGATTT
AGCCTGTTgggctattcatgatattcatgacgtaatgttttctacggaaa
gaccccggtttttgctaGTAGTGGCAacttttatacaacttttgtcagTT
TAAAGTTGTCaatactggctaaaaccggggtatttccgtagagaacatta
cgtcatgaatatcatgaattacttTATTTGGAAAGGCTATCAAATAAAAT
TCACGATCAATTTGATTCTTGATATCCACgatgtaatgttttctacggaa
ttACGCCGGTTTTTGCcggtagtggcaaatttaagctataaagaaaaatt
gttaaaaattttctaCTACTGACCAAACCGGGgcgtttccgtagaaaaca
ttacgtaatgaatacTCTGAATTGAGTTGCAATTGGCGAAGTAAAGAGTa
acagaaaaatttgaattaaatacAATCTCTCTTCAATTCAAATCCTCTCC
GGGCATTACCAAGTTTTTTCCCGAATATTCGTTAGCCTAAAACAAACTCT
ACTTTGctgaataaaaaatttaaaaacgatAAATATGGTCATGTGGATGA
TTTTAAAGCTCCGATGGGGTTAGAGATAAAACTTTCGGATGGGAAATAAA
GCCACTTGATTGCCCGTCTGAAACGCGTGGACTGTGTTTTTCACATGTAC
CCCGGATCGAAAGTAAAATGCATTGCcacatttcgaaaaatatatgccgc
gtgaaaataaaaaaaatgcttGATACAATCCGTCATTCTGAATGTGGTGC
AAaccttaaggcttcacttttttcttgcttgcctttaaactcaatgggat
GGATGGTTTTCATAAGGGTCACGTGATTGATTCTTTTTTTCTGAACCGAC
CAATGAAATGCGTTCTACATTGTTTTAGATATCACACGTGTTATGGAACA
AGCAATCAGTGATCGTCTTAAAGGTCACGTGATTGATCTTTTCGTTCTGT
ATTGACCAATGAAATGCGTTCTTGATTGTTTTCAGATATCACACGTGTTA
TGGAACAAGCAATCAGTGATCGTGTTAAAGGTCACGTGATTGATCCTTTC
GTTCTGTATTGACCAATGTAATGTATTCTTCATTGTTTTCAGATATCACA
CGTGTTATGGAACAAGCAATCAGTGATCGTCTTAAAGGTCACGTGATTGA
TCCTTTTGTTCTCAATCAACGAATCAAATCGATGTACACGTGGCAAAATG
TCTCAAGAAAGACAGAAACTGTAAGAAATTCTTTAACATATCTGTGCTCC
ATACTTCAACTTGAAACTAATAAGGTGTACACCAAAAAACCCTTTATAGC
TAAGTAAACCTTCCCTTTTATAATTGCGAAGGAAAAGTTCCATTGGCTCA
ACATCGGGACTTTCATTGGCATCTTAGTGTTCATTGTGCTGTATGCCAGT
TTTTGAAGAAGCagcgctttgtcaattcaagaaGAAACATCGAGTAACAA
TCAGTACGAAGTGTACGCATTGCGAACAAACATTCGACTATTGCTAtgtc
gctgggccttcatgccgctTCGGTTTCTTGTATATTATGTAAAGCTGCGC
TTGTTTGAATAGTATTCTTTTGCTATACCTCCCTAATAGTAATACAAATC
ATAGATTTCGTAATTTTTGAACAGATAACGGCTAGAATTACTGACAGCCT
TCCATTATTAAACTAAATGATActtcttcaatttctttcgAGTGTTATCA
TTCCTTGTCCTAATAATTGGTCCATTTTGAACACGATACAGGttgtattt
tttcttaaaagagaTTATACAGTGAGATCTCGTTAATTCGAATTTCTTTT
AAtcgaatttttctataattcgaactaattgtATGTTCCCATCAAAGGGA
AAGCCTCATAAAATAATCCGTTTAATTCGattttttctctatttcgaaga
aaaatattttggttccttgaagatcgaattagagagagtgtaGAATTGTT
ATGATATCTCAAATTGCGATGATCGCCCAATTTGATaggattatttttaa
aaatactgatgaaaaaaaattgtcaacccTTTCGAAACcttattttttga
tgagaaaggTTATCAAATAACGATATAATATCGAGTGACCAAACAGTGTC
AAAtgttttggattttttatttatatctCTTATTTTTATGATCAAACGTA
ATActttttcaaaacagaatttGCGGTTACGGCATTTTGGTGTGAGTTTT
TCAGGCGACATGATTGCATCAATCTTATTAGCTGTACCCGGTTTCTTTTT
TATATGGATGTTAATCACTTATGTGGAACATTTGATCAGTTTGAGAAAAT
ATCCGAAAGGACCATTCCCTTTACCGCTGGTTGGTAATCTTTTGATGTTG
AGCAAAACACCGTATTTGGATTTCATTGAAATTGGAAAGCGATATGGAGA
TGTTTTTAGTTTGAGTCTAGGTAAGTGTGTTTGCTTTCTCCTAGTACAGT
GGAGTCTCACTAACTCAAGATAAATTTTTTCGAGCTAGAAGGAAATCTCG
AGTAATGGAAATTGGTTTGTAAGGCATCTTTGCCTGATGAGTTAAGGAGA
CAATTGAGTTATAAATAAGTTCGAGTTGcaatttaaaattaattaacaaa
ttaaaattttctcattcagagaaaatttaccaagttcaattatttttgaa
cCCACTCAATTCATAAAGCATCATTAtttaaaagtatcaatttttgagaa
aaatgaatattCTGTTCTAAACTCTCGAGAAACATGGCCCCGAAAAGACA
GAAAGAAATTTGTCTGGAAAATACCAAAATTGGGTGGTCTCTGTGTCAAA
ATGTACCTAAAATTTTTAGTACATaggtactaaaataccactttTCTAAA
ATGGGGTGGTGGTATGCAAGAAAttctcgaaaatccttttaataCACATA
TTTGTCCAAGTTGTCCTAATACAACGAATTATTTAATTCtacatttttat
ccaacatgCTGCGAACAATATTgcttctttttcagaaaaaattttttctg
tctgtttgttaaatgaaaattgaagtttGGCCAAAAGCTTTTGTACAAGA
GAAGAtaatataccgggtgacccacgaaaaagttcaaaagtgttttttac
acttttcgaaaagtgaattttgactttaaaagctcataagtagagaacaa
gttggtcaaatttgaaaagtgatggctcaaattttaagttaggatatcta
ctttctaaatatcaaaactccaagcactttaggacatttgttcggcctca
agacgtcgggaaacgtctgaactttttcgtgggtcacccggtacataTAA
TCTCACTGTAAGTAATCTCAATTTTGTAGGAATGACTCGTATAGTCATTA
TCAACTCCTACACCAATATCAAAGAAGCATTGATCACGCGAGGAACTGAT
TTTGCCGGACGTCCGACAGATAGTATCGTCAACCGTATTCCATCCAATAA
TTTCACCAGTGTCATATCCTTTGATTACtccaaatcttttgttttcgtTC
GGAAACTTGCCTTCAAGAGTCTTCACTTGTATGGAGCTGGTATGAAGAAT
ATTGAAGACATTGTGATTGAAGAAGTCGAAAAGATGTGCTCCATACTCAC
CAAAGAAGCTGGAAAGCCAGTCCCAATCAGACATCATCTAGGTTGGTTTC
AATTTATTTTCCCTTTTACTtctattttgaaagaaagtcgtttgtctttt
tcttaaagattttatttttacataagttttCCTGTTTCAtttcagacaca
tatttcatattgtctgcctattgttatattatgctgatataaacaaagaa
atgtttttcttttcctctttttgaccaatcttgccccacatccgtgtcaa
ttcaatttgaaaaagcttgtaaattaaaactgatgagtaagcaaacgata
tcactcttatttaaaaacaaagcctTTAAGCATATTTTTCGCTTTTGGAA
TAGGATAAGGTGGTTTTGGTCAGGGGTTCAATATTTATAACGGATAGTTT
CCTTGTACctcaaatgaaaagaaagattcttagtttatatatatttttta
gcgCATCGCAAATCCGCCACTGCACGGACTGTAAAGCTGGGCGATGCATC
CAACATTATTGTTGCATGAAATGTGCAAGTCATAATATTgcaacttttta
ataaaaatggtggaaatcatgttggatgaagtttgagcaccaaacatttc
atccaacatttttatgaaattaacGTCACCTTCATGTTGCTTCcaatgtt
tgacgtttttgtgcAAATGACTTTTCGTGCAACTTCGATTTTTTCCACGT
GACTTTCATCCAACATTTCGTCTAACAAAGAATTTGgaatgttggatcaa
atgtcGGATGCATTTGCGCCGCCTTAAGGTAGGAAGCTTCATTATTTTAC
CTGCTCAACATCATAGAAATACTTCTTTTCATTCCCAGGAAATTCTCTGG
TCAACACCATATGTCATCTTTGCTTCAGTAAGAAATACGATTCACACGAT
CCTGAATTTCAACAGATTCTGGAATCCATGAGAATGATTATCCAGGGTCT
AGCACCTGGTTAAGCCATCTCCATATTCCCCTGGCTAAAATACCTACCAC
ATAccaagaaattcaaagaattacTCAAAGGTTCTGAAATACGCGATTCA
ATCACTCGTAAATTCTTTGAAGAACACATCCAAACTTTCAATCCAGAGAA
ATTACGAGATTTGACAGATAATTTGTTGTACTTGTCACAAAACAAGGAGA
TGTGGCAGGATGCTGGTTTTGAAAAAGTCACACAACTTCAATTGGAATCG
ATCATCAATTCAATCTTTGTTGCTGGCATTGAAACCTCTTTATCCACTCT
CCGCTGGATGTTGATCTATTTATTTCACaatccaaaaattcaaaacaaga
tCTACAATGAATTATACACAAACCTTGGACCTAAGCATCAAATCACTACT
GAAGATATGAGATCATTACCCTACACTCAAGCTGTTCTCCATGAAACCAA
CCGGTATGCGTCTACGCTACCTCTTAGCATACCACACAAGACGACTGTCG
ATACTTCAGTTGCCGGCTTCTCAGTACCCAAAGGAACACAAGTCCTTTTC
AACTTATACAGCATGCATCACGACCCAACCCATTGGGATGAACCAGAGAA
GTTTAAACCAGAACGTTGGCTCAATCCCGATGGTAAtctcaagaaagaaa
aagttagCCATTATCTACCCTTCTCGACAGGTACGCGGGTATGCCTTGGA
GAGAGGTTAGCTAAGATGCAAATGTTTTTGATTGTCACCAAATTGTTTTT
AACGTTCGAAGTGGAACTTGCTCCTGGAGAAAAGGTGCCAGATATGAAAG
AAGGCAACATTGGGATTACCCTGGAACCGAGAGATGACTTCAAAGTGATT
CTCAAACCCCGAAAACATTGAAACCGAACCCTAGCCTGAACCATAATGTC
CAAAAAACGacataaaaaatatattagaaaaCAGTTATGTAATACTATTA
GGTGGAATTCAGATTTTTTACTGCGGCAAATGATTCGGAGATCTTCTTCA
CAAGTTGAATCGTATCCACCACATGTTTACGAGTTTAAATAGCATGAGGA
tttgatattttatgatttatgaGTTGTAGCTTATTCTAACACATCATAGA
AAGATAACATTATAAGAAATAAAATCgagttttaaaatattgataccCAT
TTAACGCGACACTCTTCATCTTCAAAAGCGTAAAAATAATATCTATCTGT
TTTCCTATTTTACAAACTGGCCAGTATTATACAAAAGGTACTTTTCTGGA
CAAATGTAACTAGTCTAATTGTCTTTAGATTTTGATAGAATACTGCATTA
AGTATTAACCTTCCCTCCATGAAAAGATCTACTGAAAGATAAATGTTACT
TGGCAAATCAATGCGCCCTAGCCCGGGTCAGCTAATGTCaagcagtgccg
taggaagcattttcatatttggGGGGcagaagtttagtgacaccgcgagg
gccaaccatggtttggcccgtgggggaaaattttgaaaatttgagctcta
gattgcttgaaatgCACTCATAACATGCActtaaaagacaattatgacaa
attaaaaaagaaaaactttgcattttgcaNCTAGTCTAATTGTCTTTAGA
TTTTGATAGAATACTGCATTAAGTATTAACCTTCCCTCCATGAAAAGATC
TACTGAAAGATAAATGTTACTTGGCAAATCAATGCGCCCTAGCCCGGGTC
AGCTAATGTCAAGACAATGGCAGTGCTTACGGCAGCGACCCTTTTCAGAT
TCAACCTTGCGAGGAACGCAACTTTTCTCCCGTGTTCAAGTTTCGGTACA
TTAAGCCTATACTAGACAACACCTACGCAACTAACGGCTATTCCACAAAT
CGTCACAATCACGCCACCATCCTCAAATAGGTCAATACATAAACTAACTA
ATGCTATCCGGGAAATGTGTCCTTTCAACGGCTGGTTTATCATTTTTGTC
CGATTCGTGTAGTTTCATTGACAAGTTGACCtgatgaaaataactttttc
tttAGGTGTACGATTCGATCAGTAACAATGTCGAGTTATCCATCATGGAA
CGTCTCGAAAGGTAAACTTTTGTAGGGCTAATTTCCTGTGGTATTTTACG
GGGCAAAATTCCTTGGTGTTAACTTCTTAGAATGCATCACACAATCACTC
CTTGAATAATCACTTTGTCCTTCTTCCGCCCTGATCTAGATTTGTTGCGT
TGAGCAGACAACGGGACACCATGGGACTtgggtttggaaaaaatccaacg
ataaaaatcgcaaaaaatccCATTTAGTCGCCGAGCATGCTAGAGTCTCC
AAAATACGGTTTGTTTGCTCTAACGCTTGCTTCTATCATTTGTTTATTCT
TCAGGTTTGAAGGTCGAGCTGTGATTGCTGGCAAGTTTTATGTGTTCACC
GTATTCGTggatttgttgtttttgttcattcttgaTTGGCTGTACCCAAG
AGATGAAGTAAGTTGGTGTTACGCCCATAAAAATTCATTATATTTTGATT
CGAATCGTTATATAATTTTATCATTCCCTTGGGAATTGGATTTCAATTGA
ACGTACAATAGGATTGTACTTTATAcacaatgtttttctttttcggaCAT
GTATAATAACCCCTGAGACTCCGTTGTAAAGTGGGAATCAATGTGCGCCA
GGGTGGTAGTTTAGAAAAAGGGCGCCCCATTCAGCTTAAAATTCTTCTTA
CAGAAACTTTTCGTTTTTCACAGTCTCAAAACCACGATACGAAGACAGCA
AGGCAATCTGATCGAAAGAAGTTTTCTTGACGACAATTAGAAGGATGATT
GACTGAATCGTTTTGTGTATTctcattttgttatttttcacaACAGGGCC
CTTCGTCTACTTGTATATATtaggttttagattttttaaagattttat
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_039000XLOC_039000Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00062209-exon-scaffold_362-1491911889:733540..733736TCONS_00062209-exon-scaffold_362-1491911889:733540..733736Clytia hemisphaericaexon
TCONS_00062209-exon-scaffold_362-1510915933:733540..733736TCONS_00062209-exon-scaffold_362-1510915933:733540..733736Clytia hemisphaericaexon
TCONS_00062209-exon-scaffold_362-1575043694:733540..733736TCONS_00062209-exon-scaffold_362-1575043694:733540..733736Clytia hemisphaericaexon
TCONS_00062209-exon-scaffold_362-1491911889:733944..734034TCONS_00062209-exon-scaffold_362-1491911889:733944..734034Clytia hemisphaericaexon
TCONS_00062209-exon-scaffold_362-1510915933:733944..734034TCONS_00062209-exon-scaffold_362-1510915933:733944..734034Clytia hemisphaericaexon
TCONS_00062209-exon-scaffold_362-1575043694:733944..734034TCONS_00062209-exon-scaffold_362-1575043694:733944..734034Clytia hemisphaericaexon
TCONS_00062209-exon-scaffold_362-1491911889:734376..734441TCONS_00062209-exon-scaffold_362-1491911889:734376..734441Clytia hemisphaericaexon
TCONS_00062209-exon-scaffold_362-1510915933:734376..734441TCONS_00062209-exon-scaffold_362-1510915933:734376..734441Clytia hemisphaericaexon
TCONS_00062209-exon-scaffold_362-1575043694:734376..734441TCONS_00062209-exon-scaffold_362-1575043694:734376..734441Clytia hemisphaericaexon
TCONS_00062209-exon-scaffold_362-1491911889:737280..737402TCONS_00062209-exon-scaffold_362-1491911889:737280..737402Clytia hemisphaericaexon
TCONS_00062209-exon-scaffold_362-1510915933:737280..737402TCONS_00062209-exon-scaffold_362-1510915933:737280..737402Clytia hemisphaericaexon
TCONS_00062209-exon-scaffold_362-1575043694:737280..737402TCONS_00062209-exon-scaffold_362-1575043694:737280..737402Clytia hemisphaericaexon
TCONS_00062209-exon-scaffold_362-1491911889:737791..737966TCONS_00062209-exon-scaffold_362-1491911889:737791..737966Clytia hemisphaericaexon
TCONS_00062209-exon-scaffold_362-1510915933:737791..737966TCONS_00062209-exon-scaffold_362-1510915933:737791..737966Clytia hemisphaericaexon
TCONS_00062209-exon-scaffold_362-1575043694:737791..737966TCONS_00062209-exon-scaffold_362-1575043694:737791..737966Clytia hemisphaericaexon
TCONS_00062209-exon-scaffold_362-1491911889:738413..738528TCONS_00062209-exon-scaffold_362-1491911889:738413..738528Clytia hemisphaericaexon
TCONS_00062209-exon-scaffold_362-1510915933:738413..738528TCONS_00062209-exon-scaffold_362-1510915933:738413..738528Clytia hemisphaericaexon
TCONS_00062209-exon-scaffold_362-1575043694:738413..738528TCONS_00062209-exon-scaffold_362-1575043694:738413..738528Clytia hemisphaericaexon
TCONS_00062209-exon-scaffold_362-1491911889:741762..741869TCONS_00062209-exon-scaffold_362-1491911889:741762..741869Clytia hemisphaericaexon
TCONS_00062209-exon-scaffold_362-1510915933:741762..741869TCONS_00062209-exon-scaffold_362-1510915933:741762..741869Clytia hemisphaericaexon
TCONS_00062209-exon-scaffold_362-1575043694:741762..741869TCONS_00062209-exon-scaffold_362-1575043694:741762..741869Clytia hemisphaericaexon
TCONS_00062209-exon-scaffold_362-1491911889:742178..742284TCONS_00062209-exon-scaffold_362-1491911889:742178..742284Clytia hemisphaericaexon
TCONS_00062209-exon-scaffold_362-1510915933:742178..742284TCONS_00062209-exon-scaffold_362-1510915933:742178..742284Clytia hemisphaericaexon
TCONS_00062209-exon-scaffold_362-1575043694:742178..742284TCONS_00062209-exon-scaffold_362-1575043694:742178..742284Clytia hemisphaericaexon
TCONS_00062209-exon-scaffold_362-1491911889:742754..742836TCONS_00062209-exon-scaffold_362-1491911889:742754..742836Clytia hemisphaericaexon
TCONS_00062209-exon-scaffold_362-1510915933:742754..742836TCONS_00062209-exon-scaffold_362-1510915933:742754..742836Clytia hemisphaericaexon
TCONS_00062209-exon-scaffold_362-1575043694:742754..742836TCONS_00062209-exon-scaffold_362-1575043694:742754..742836Clytia hemisphaericaexon
TCONS_00062209-exon-scaffold_362-1491911889:743260..743345TCONS_00062209-exon-scaffold_362-1491911889:743260..743345Clytia hemisphaericaexon
TCONS_00062209-exon-scaffold_362-1510915933:743260..743345TCONS_00062209-exon-scaffold_362-1510915933:743260..743345Clytia hemisphaericaexon
TCONS_00062209-exon-scaffold_362-1575043694:743260..743345TCONS_00062209-exon-scaffold_362-1575043694:743260..743345Clytia hemisphaericaexon
TCONS_00062209-exon-scaffold_362-1491911889:745418..745462TCONS_00062209-exon-scaffold_362-1491911889:745418..745462Clytia hemisphaericaexon
TCONS_00062209-exon-scaffold_362-1510915933:745418..745462TCONS_00062209-exon-scaffold_362-1510915933:745418..745462Clytia hemisphaericaexon
TCONS_00062209-exon-scaffold_362-1575043694:745418..745462TCONS_00062209-exon-scaffold_362-1575043694:745418..745462Clytia hemisphaericaexon
TCONS_00062209-exon-scaffold_362-1491911889:745677..745759TCONS_00062209-exon-scaffold_362-1491911889:745677..745759Clytia hemisphaericaexon
TCONS_00062209-exon-scaffold_362-1510915933:745677..745759TCONS_00062209-exon-scaffold_362-1510915933:745677..745759Clytia hemisphaericaexon
TCONS_00062209-exon-scaffold_362-1575043694:745677..745759TCONS_00062209-exon-scaffold_362-1575043694:745677..745759Clytia hemisphaericaexon
TCONS_00062209-exon-scaffold_362-1491911889:751095..751150TCONS_00062209-exon-scaffold_362-1491911889:751095..751150Clytia hemisphaericaexon
TCONS_00062209-exon-scaffold_362-1510915933:751095..751150TCONS_00062209-exon-scaffold_362-1510915933:751095..751150Clytia hemisphaericaexon
TCONS_00062209-exon-scaffold_362-1575043694:751095..751150TCONS_00062209-exon-scaffold_362-1575043694:751095..751150Clytia hemisphaericaexon
TCONS_00062209-exon-scaffold_362-1491911889:751444..751546TCONS_00062209-exon-scaffold_362-1491911889:751444..751546Clytia hemisphaericaexon
TCONS_00062209-exon-scaffold_362-1510915933:751444..751546TCONS_00062209-exon-scaffold_362-1510915933:751444..751546Clytia hemisphaericaexon
TCONS_00062209-exon-scaffold_362-1575043694:751444..751546TCONS_00062209-exon-scaffold_362-1575043694:751444..751546Clytia hemisphaericaexon
TCONS_00062209-exon-scaffold_362-1491911889:751813..751987TCONS_00062209-exon-scaffold_362-1491911889:751813..751987Clytia hemisphaericaexon
TCONS_00062209-exon-scaffold_362-1510915933:751813..751987TCONS_00062209-exon-scaffold_362-1510915933:751813..751987Clytia hemisphaericaexon
TCONS_00062209-exon-scaffold_362-1575043694:751813..751987TCONS_00062209-exon-scaffold_362-1575043694:751813..751987Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_362supercontigscaffold_362:733540..751987 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.86388	2.86663	4.49477	4.80766	11.5398	10.0691	7.15757	7.72492	8.86372	7.44352	5.82499	6.98249	5.85634	5.12383	8.08267	10.2308	10.3236	11.2827	2.4141	4.28048	7.12386	6.80079	6.43894	6.1944	12.3103	11.4028	6.47012	4.35722	4.78915	4.63685
Blast
[Close]
BLAST of TCONS_00062209 vs. Swiss-Prot (Human)
Match: PIGA (Phosphatidylinositol N-acetylglucosaminyltransferase subunit A OS=Homo sapiens GN=PIGA PE=1 SV=1)

HSP 1 Score: 531.561 bits (1368), Expect = 0.000e+0
Identity = 253/385 (65.71%), Postives = 312/385 (81.04%), Query Frame = 1 
Query:  187 HNICMVSDFFYPNMGGVESHIYQLSQCLLARGHKVIVVTHAYGNRKGVRYLTNNLKVYYLPFSIMYINVIQPTGFVTLPMFRDIFIREKITIVHGHSAFSVLCQESIMHGKSMGLKTVFTDHSLFGFADVSSILTNKLLEFTLTDIDHVICVSNTSKENTVLRASIHPDKVSVIANAVDSDVFTPDPTKKDASKITIAVASRLVYRKGIDLLAGVIPILCQKFPQVQFIIGGDGPKRILLEEVREKYQLHERVQLLGELKHKDVRNLLVQGDIFLNTSLTEAFCIAIVEAASCGLQVVSTNVGGVFEVLPSDMIYLAEPSVQDITRVMEQAISDRLKGHVIDPFVLNQRIKSMYTWQNVSRKTETVYDSISNNVELSIMERLERF 1341
            HNICMVSDFFYPNMGGVESHIYQLSQCL+ RGHKVI+VTHAYGNRKG+RYLT+ LKVYYLP  +MY      T F +LP+ R IF+RE++TI+H HS+FS +  +++ H K+MGL+TVFTDHSLFGFADVSS+LTNKLL  +L D +H+ICVS TSKENTVLRA+++P+ VSVI NAVD   FTPDP ++  S ITI V SRLVYRKGIDLL+G+IP LCQK+P + FIIGG+GPKRI+LEEVRE+YQLH+RV+LLG L+HKDVRN+LVQG IFLNTSLTEAFC+AIVEAASCGLQVVST VGG+ EVLP ++I L EPSV+ +   +E+AI     G +  P  ++  +K+ YTW+NV+ +TE VYD +S    L + +RL+R 
Sbjct:   33 HNICMVSDFFYPNMGGVESHIYQLSQCLIERGHKVIIVTHAYGNRKGIRYLTSGLKVYYLPLKVMYNQSTATTLFHSLPLLRYIFVRERVTIIHSHSSFSAMAHDALFHAKTMGLQTVFTDHSLFGFADVSSVLTNKLLTVSLCDTNHIICVSYTSKENTVLRAALNPEIVSVIPNAVDPTDFTPDPFRRHDS-ITIVVVSRLVYRKGIDLLSGIIPELCQKYPDLNFIIGGEGPKRIILEEVRERYQLHDRVRLLGALEHKDVRNVLVQGHIFLNTSLTEAFCMAIVEAASCGLQVVSTRVGGIPEVLPENLIILCEPSVKSLCEGLEKAIFQLKSGTLPAPENIHNIVKTFYTWRNVAERTEKVYDRVSVEAVLPMDKRLDRL 416
The following BLAST results are available for this feature:
BLAST of TCONS_00062209 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PIGA0.000e+065.71Phosphatidylinositol N-acetylglucosaminyltransfera... [more]
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