TCONS_00062141 (transcript) - C. hemisphaerica

Overview
NameTCONS_00062141
Unique NameTCONS_00062141
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length109

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00062141 ID=TCONS_00062141|Name=TCONS_00062141|organism=Clytia hemisphaerica|type=transcript|length=109bp
CTTTCATCTAATCAAAAAGGATTCTGTGAAAAATAAcacttgcatcaaat
tcccgctttcgtTTGAGAAGATGATAAAGAATTTCTTAGAATCaacgatt
gaaacaaat
Run BLAST on NCBI

transcript from alignment at scaffold_361:1720254..1720362

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00062141 ID=TCONS_00062141|Name=TCONS_00062141|organism=Clytia hemisphaerica|type=transcript|length=109bp|location=Sequence derived from alignment at scaffold_361:1720254..1720362 (Clytia hemisphaerica)
atttgtttcaatcgttGATTCTAAGAAATTCTTTATCATCTTCTCAAacg
aaagcgggaatttgatgcaagtgTTATTTTTCACAGAATCCTTTTTGATT
AGATGAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_038964XLOC_038964Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00062141-exon-scaffold_361-1491911889:1720254..1720362TCONS_00062141-exon-scaffold_361-1491911889:1720254..1720362Clytia hemisphaericaexon
TCONS_00062141-exon-scaffold_361-1510915933:1720254..1720362TCONS_00062141-exon-scaffold_361-1510915933:1720254..1720362Clytia hemisphaericaexon
TCONS_00062141-exon-scaffold_361-1575043694:1720254..1720362TCONS_00062141-exon-scaffold_361-1575043694:1720254..1720362Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_361supercontigscaffold_361:1720254..1720362 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00062141 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top