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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00062136 ID=TCONS_00062136|Name=TCONS_00062136|organism=Clytia hemisphaerica|type=transcript|length=1778bp
AGCGTTTCTTGCTTTTTTCAGAAAAGGCGTTTGTTAGTGAGGAGAAAAGG
TATTGGAGGAGAAAAACTTTATTATATTCATATCAAAATGAGTGATTTTC
AACGAGAAAAAGTGGTCATTAGAAATGCACAAGATGATTTGAGAGAGCAC
AATGCACATGGTGTTCGAAGAAGAATAGATGAACACAACGCTGCTGGCCT
TGGTGATATTTTGAAGGAAGTAAAAAATCATGATGATGTTATTCACGATA
ATGATAAACATAATAATCACCAAGGGGTTGTTGATGATCAAGTGAAAGCG
AATGTTGTTGCGCATGTGCAAAAGGGAGTAAAAAATCATGGTGATGTTAT
TCACGAAGATGATAATCACCAAGCAATTAGTGTTAATGATCACGAAACGA
GAAGAGGTGAAGCTACTGCAGGAAATACTCAAAACGAAGTGAAGGCAATG
AGAAAAGAGTTGCAAAAATTAAAGATGGAAAGagaacttgaaaaattaaa
gatggAAAGAGAACTTGAAAAAGACAACCTTAAACGAGAGAAAGAAATTG
AGGCTTTTGAAGGCGTTGTTGAGAagattaaaatagaaaatgaacagttg
aaaaaggattttgaaatgcaaaaattaaaAGCTGAGGTTGTTTtgttaaa
aacagaaaaacagtTTGCGTTAGATGCAAAAATACTATCCGAACAAAAGC
ACAAAGTTGAGGAAGAAATGAAAGTGATGAAAATTGAGAAAGAGCTACTc
cttcaagaaaaaaaagactTCAAGGAAAAAGCCGAGAAACTGCAAAACGA
GAAAGCTGCTATCGAAGGAAAATATGAAACCTTGCAAAATGTCGCAACTG
AAAAACAAGGAAGATTTCAAATGATTTTGTCAAAGGTACAGAATGAGTTG
AAGAAATCAACAGGGGAGGTTGAGAGATTATCAGAGGAAAGAAACCAATT
TGAGAAGTTGTACGAAacaacaaaaagtgaaaaagacaGGATACTACAGG
AGAAGAAAATGCTCGAAGGAAAATTAAACGAATTACAGGAAAAAAGTCCG
AAAAAACCCACGAAAAACATACAGCACGTTAATGAAAACAGAAGGTTGGA
CATCGATGTAATTAATGATCCATCCAAGTCTATCCAGGATGCCATAAAGA
CGCTATCTGTCATGATTTTTGAACCAAAAATTTCAGATCGCTATAGAAGA
CTATACGAATTTCTCTATGACGAAGTTTCGGACAGTCTTGAATGGCAAAA
CTTTATTGTTATTCGATTGTGGATGGGTGACATTAAGAAAGTTGACATAA
AGGAATACGTAAACAAATGGAACACTGATAAACTGAAATTCGTTAAAGTT
CTTCATACAAAGGACAACACAAAATCAAGAGACATGCGACATATTGCTGG
AAGTGTATGGGGAAGCGATATGGGATGGGTCACAGAATATAAAGGACCAT
TTGGTTCTAGCTGTCTCATTTTCGTTATAAAATAAATGAGTAGCCGTGGT
CCCATACAGTGTGGGATATACCATCCCCATAACTTGAACCTCTAAAACTC
AATGTCTCCTTATTTCGAATGACTCGTTCGTTAGTCCCTTGAGAGAAAAT
TACGCTCTTTTATGTCTTTAGaaccatagtgtgcagaggagTCTCATCCC
CTAAATTCATATGACATCCCCTATATACACCGTTCACCTATTTTGGAAAT
CCCACactatttaaattttaaaatacagaaaatacagaaaatattcaaac
tttttcaaattttcaaacaagaatAAAT Run BLAST on NCBI protein sequence of TCONS_00062136-protein >TCONS_00062136-protein ID=TCONS_00062136-protein|Name=TCONS_00062136-protein|organism=Clytia hemisphaerica|type=polypeptide|length=494bp
SVSCFFQKRRLLVRRKGIGGEKLYYIHIKMSDFQREKVVIRNAQDDLREH
NAHGVRRRIDEHNAAGLGDILKEVKNHDDVIHDNDKHNNHQGVVDDQVKA
NVVAHVQKGVKNHGDVIHEDDNHQAISVNDHETRRGEATAGNTQNEVKAM
RKELQKLKMERELEKLKMERELEKDNLKREKEIEAFEGVVEKIKIENEQL
KKDFEMQKLKAEVVLLKTEKQFALDAKILSEQKHKVEEEMKVMKIEKELL
LQEKKDFKEKAEKLQNEKAAIEGKYETLQNVATEKQGRFQMILSKVQNEL
KKSTGEVERLSEERNQFEKLYETTKSEKDRILQEKKMLEGKLNELQEKSP
KKPTKNIQHVNENRRLDIDVINDPSKSIQDAIKTLSVMIFEPKISDRYRR
LYEFLYDEVSDSLEWQNFIVIRLWMGDIKKVDIKEYVNKWNTDKLKFVKV
LHTKDNTKSRDMRHIAGSVWGSDMGWVTEYKGPFGSSCLIFVIK Run BLAST on NCBI transcript from alignment at scaffold_361:1523016..1524793 Legend: exonthree_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00062136 ID=TCONS_00062136|Name=TCONS_00062136|organism=Clytia hemisphaerica|type=transcript|length=1778bp|location=Sequence derived from alignment at scaffold_361:1523016..1524793 (Clytia hemisphaerica)
ATTTattcttgtttgaaaatttgaaaaagtttgaatattttctgtatttt
ctgtattttaaaatttaaatagtGTGGGATTTCCAAAATAGGTGAACGGT
GTATATAGGGGATGTCATATGAATTTAGGGGATGAGActcctctgcacac
tatggttCTAAAGACATAAAAGAGCGTAATTTTCTCTCAAGGGACTAACG
AACGAGTCATTCGAAATAAGGAGACATTGAGTTTTAGAGGTTCAAGTTAT
GGGGATGGTATATCCCACACTGTATGGGACCACGGCTACTCATTTATTTT
ATAACGAAAATGAGACAGCTAGAACCAAATGGTCCTTTATATTCTGTGAC
CCATCCCATATCGCTTCCCCATACACTTCCAGCAATATGTCGCATGTCTC
TTGATTTTGTGTTGTCCTTTGTATGAAGAACTTTAACGAATTTCAGTTTA
TCAGTGTTCCATTTGTTTACGTATTCCTTTATGTCAACTTTCTTAATGTC
ACCCATCCACAATCGAATAACAATAAAGTTTTGCCATTCAAGACTGTCCG
AAACTTCGTCATAGAGAAATTCGTATAGTCTTCTATAGCGATCTGAAATT
TTTGGTTCAAAAATCATGACAGATAGCGTCTTTATGGCATCCTGGATAGA
CTTGGATGGATCATTAATTACATCGATGTCCAACCTTCTGTTTTCATTAA
CGTGCTGTATGTTTTTCGTGGGTTTTTTCGGACTTTTTTCCTGTAATTCG
TTTAATTTTCCTTCGAGCATTTTCTTCTCCTGTAGTATCCtgtctttttc
actttttgttgtTTCGTACAACTTCTCAAATTGGTTTCTTTCCTCTGATA
ATCTCTCAACCTCCCCTGTTGATTTCTTCAACTCATTCTGTACCTTTGAC
AAAATCATTTGAAATCTTCCTTGTTTTTCAGTTGCGACATTTTGCAAGGT
TTCATATTTTCCTTCGATAGCAGCTTTCTCGTTTTGCAGTTTCTCGGCTT
TTTCCTTGAagtcttttttttcttgaaggAGTAGCTCTTTCTCAATTTTC
ATCACTTTCATTTCTTCCTCAACTTTGTGCTTTTGTTCGGATAGTATTTT
TGCATCTAACGCAAactgtttttctgtttttaacaAAACAACCTCAGCTt
ttaatttttgcatttcaaaatcctttttcaactgttcattttctatttta
atctTCTCAACAACGCCTTCAAAAGCCTCAATTTCTTTCTCTCGTTTAAG
GTTGTCTTTTTCAAGTTCTCTTTccatctttaatttttcaagttctCTTT
CCATCTTTAATTTTTGCAACTCTTTTCTCATTGCCTTCACTTCGTTTTGA
GTATTTCCTGCAGTAGCTTCACCTCTTCTCGTTTCGTGATCATTAACACT
AATTGCTTGGTGATTATCATCTTCGTGAATAACATCACCATGATTTTTTA
CTCCCTTTTGCACATGCGCAACAACATTCGCTTTCACTTGATCATCAACA
ACCCCTTGGTGATTATTATGTTTATCATTATCGTGAATAACATCATCATG
ATTTTTTACTTCCTTCAAAATATCACCAAGGCCAGCAGCGTTGTGTTCAT
CTATTCTTCTTCGAACACCATGTGCATTGTGCTCTCTCAAATCATCTTGT
GCATTTCTAATGACCACTTTTTCTCGTTGAAAATCACTCATTTTGATATG
AATATAATAAAGTTTTTCTCCTCCAATACCTTTTCTCCTCACTAACAAAC
GCCTTTTCTGAAAAAAGCAAGAAACGCT Coding sequence (CDS) from alignment at scaffold_361:1523016..1524793 >TCONS_00062136 ID=TCONS_00062136|Name=TCONS_00062136|organism=Clytia hemisphaerica|type=CDS|length=1485bp|location=Sequence derived from alignment at scaffold_361:1523016..1524793 (Clytia hemisphaerica)
TTATTTTATAACGAAAATGAGACAGCTAGAACCAAATGGTCCTTTATATT
CTGTGACCCATCCCATATCGCTTCCCCATACACTTCCAGCAATATGTCGC
ATGTCTCTTGATTTTGTGTTGTCCTTTGTATGAAGAACTTTAACGAATTT
CAGTTTATCAGTGTTCCATTTGTTTACGTATTCCTTTATGTCAACTTTCT
TAATGTCACCCATCCACAATCGAATAACAATAAAGTTTTGCCATTCAAGA
CTGTCCGAAACTTCGTCATAGAGAAATTCGTATAGTCTTCTATAGCGATC
TGAAATTTTTGGTTCAAAAATCATGACAGATAGCGTCTTTATGGCATCCT
GGATAGACTTGGATGGATCATTAATTACATCGATGTCCAACCTTCTGTTT
TCATTAACGTGCTGTATGTTTTTCGTGGGTTTTTTCGGACTTTTTTCCTG
TAATTCGTTTAATTTTCCTTCGAGCATTTTCTTCTCCTGTAGTATCCtgt
ctttttcactttttgttgtTTCGTACAACTTCTCAAATTGGTTTCTTTCC
TCTGATAATCTCTCAACCTCCCCTGTTGATTTCTTCAACTCATTCTGTAC
CTTTGACAAAATCATTTGAAATCTTCCTTGTTTTTCAGTTGCGACATTTT
GCAAGGTTTCATATTTTCCTTCGATAGCAGCTTTCTCGTTTTGCAGTTTC
TCGGCTTTTTCCTTGAagtcttttttttcttgaaggAGTAGCTCTTTCTC
AATTTTCATCACTTTCATTTCTTCCTCAACTTTGTGCTTTTGTTCGGATA
GTATTTTTGCATCTAACGCAAactgtttttctgtttttaacaAAACAACC
TCAGCTtttaatttttgcatttcaaaatcctttttcaactgttcattttc
tattttaatctTCTCAACAACGCCTTCAAAAGCCTCAATTTCTTTCTCTC
GTTTAAGGTTGTCTTTTTCAAGTTCTCTTTccatctttaatttttcaagt
tctCTTTCCATCTTTAATTTTTGCAACTCTTTTCTCATTGCCTTCACTTC
GTTTTGAGTATTTCCTGCAGTAGCTTCACCTCTTCTCGTTTCGTGATCAT
TAACACTAATTGCTTGGTGATTATCATCTTCGTGAATAACATCACCATGA
TTTTTTACTCCCTTTTGCACATGCGCAACAACATTCGCTTTCACTTGATC
ATCAACAACCCCTTGGTGATTATTATGTTTATCATTATCGTGAATAACAT
CATCATGATTTTTTACTTCCTTCAAAATATCACCAAGGCCAGCAGCGTTG
TGTTCATCTATTCTTCTTCGAACACCATGTGCATTGTGCTCTCTCAAATC
ATCTTGTGCATTTCTAATGACCACTTTTTCTCGTTGAAAATCACTCATTT
TGATATGAATATAATAAAGTTTTTCTCCTCCAATACCTTTTCTCCTCACT
AACAAACGCCTTTTCTGAAAAAAGCAAGAAACGCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00062136-exon-scaffold_361-1491911889:1523016..1524793 | TCONS_00062136-exon-scaffold_361-1491911889:1523016..1524793 | Clytia hemisphaerica | exon |
| TCONS_00062136-exon-scaffold_361-1510915933:1523016..1524793 | TCONS_00062136-exon-scaffold_361-1510915933:1523016..1524793 | Clytia hemisphaerica | exon |
| TCONS_00062136-exon-scaffold_361-1575043694:1523016..1524793 | TCONS_00062136-exon-scaffold_361-1575043694:1523016..1524793 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_361 | supercontig | scaffold_361:1523016..1524793 . |
Blast
The following BLAST results are available for this feature:
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