TCONS_00062130 (transcript) - C. hemisphaerica

Overview
NameTCONS_00062130
Unique NameTCONS_00062130
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length263

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00062130 ID=TCONS_00062130|Name=TCONS_00062130|organism=Clytia hemisphaerica|type=transcript|length=263bp
TTTCTGACCCGTAAAGAAGAATGGGAAGAATGCATGTCTCATAAATTTTA
CCCTTGATTTTATCTCTGACATTTTTGGCCCCAAAGACAGACTTTCTGAG
TGCACCAAACGCATTACTGGACTTTCTAATTCTTGCTTCAACATCCTTGT
CGTCTGTACAGTCACTTAAAACGAAATTCCAAGAACTCTTGAACGATTGG
TAAGTATCTATCATTGATGATAATGTCTGACAGGTTAGCGTTATCATAGC
AATCTGGTGAAGT
Run BLAST on NCBI

transcript from alignment at scaffold_361:1364495..1364757

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00062130 ID=TCONS_00062130|Name=TCONS_00062130|organism=Clytia hemisphaerica|type=transcript|length=263bp|location=Sequence derived from alignment at scaffold_361:1364495..1364757 (Clytia hemisphaerica)
ACTTCACCAGATTGCTATGATAACGCTAACCTGTCAGACATTATCATCAA
TGATAGATACTTACCAATCGTTCAAGAGTTCTTGGAATTTCGTTTTAAGT
GACTGTACAGACGACAAGGATGTTGAAGCAAGAATTAGAAAGTCCAGTAA
TGCGTTTGGTGCACTCAGAAAGTCTGTCTTTGGGGCCAAAAATGTCAGAG
ATAAAATCAAGGGTAAAATTTATGAGACATGCATTCTTCCCATTCTTCTT
TACGGGTCAGAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_038953XLOC_038953Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00062130-exon-scaffold_361-1491911889:1364495..1364757TCONS_00062130-exon-scaffold_361-1491911889:1364495..1364757Clytia hemisphaericaexon
TCONS_00062130-exon-scaffold_361-1510915933:1364495..1364757TCONS_00062130-exon-scaffold_361-1510915933:1364495..1364757Clytia hemisphaericaexon
TCONS_00062130-exon-scaffold_361-1575043694:1364495..1364757TCONS_00062130-exon-scaffold_361-1575043694:1364495..1364757Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_361supercontigscaffold_361:1364495..1364757 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.611952	0	0	2.53882	1.33748	1.61361	0.75532	1.05763	0	0	0	5.0083	7.80175	0.356339	0.764812	0.942186	2.41428	0.667091	5.5845	0.606743	0.887844	0	2.61662	0	0	2.58145	3.67333	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00062130 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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