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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00062121 ID=TCONS_00062121|Name=TCONS_00062121|organism=Clytia hemisphaerica|type=transcript|length=1183bp
cgaAATTCTACGCTTaagcactgagacaggggtgttacaaTTGTGTAGGA
AACCGAGTTCAAGACTCTCCGGGACCATCAACAGGACAGCAACATatcga
tgacgtcacaagcGAGAGGTGAGATCCGATATTGATCAGGTTGCTCATCG
TTAACTTTTGATTTCACATCAAATTTAACGGTGGATAACTGAATCCATTA
TGGACGTATCAACCAATCGTACGTGTTCTCGTTTAATCAACCTCGAACCC
AGGCCTTGTTATGAGACGATTGTATCTTTCAAGAAGCAATTAAGAATAGC
ATACtaaggggccatccatatagtacgtacgcaaaaattttccaaatgtt
TGACACCCCcttcccccttgtacgcagagaacaatagaaatgacgtcatt
caaacaaTAGACGTACACTTTTACTAAACCACtttctccccccttcactg
cgtatgtactatatggatggcccctaaCATTATTATTCATCTGCTTTCTA
GTGAATGGCTTTGGGGTTCAAGGTTGCACCAGTGTAATAGCAATTCTGGA
GTCTTGAGTTTTCATGTTTTCCTAGTATTTTTCTATCAGAATAGTTTGAC
GCTCTATGGAGTAGAATGAATTATTTTGATGTCCCGTTCCTGTGTCTTGC
GCTGGATAGGAGGATCGGGACGTTAAACTTTGTAAATTATTTCAACGCAG
TATTTTCTTGTATATTtgtatattttgaaatgtaaataTTTGTATCCGAG
CTGGAtatttcttcatattttttcatACGAACTAGTATATCTTAATTAAA
gacattttaacaaaatattttggaaattagTAAAAATCATAACGTCGTTT
TGCAGAAGATTCCACTTCCCGCACTAGCATTCTCCTGACTTTTCCGGAAT
TTTCCCGGGATAACGGATGGATGagattgaaaatgtttttttctgaacGG
TACGGAAGATTTTCCAGTGTGCTTATTTCTTacgaaactgcctaactttc
cgaagctcatttttcaactcgcagtcctggtctttttccgatagtaaagt
ggcaaaggaatcttagtgcggaaagtGGAATCTTATGTAAAACTAATGAC
AAAATGTAAAATAGAAAGGCAATTGGTctgcaatttttaattttttctta
aaaaaaaaacaaataaatgcTCTAAGAAATTAA Run BLAST on NCBI transcript from alignment at scaffold_361:1037477..1038659 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00062121 ID=TCONS_00062121|Name=TCONS_00062121|organism=Clytia hemisphaerica|type=transcript|length=1183bp|location=Sequence derived from alignment at scaffold_361:1037477..1038659 (Clytia hemisphaerica)
TTAATTTCTTAGAgcatttatttgttttttttttaagaaaaaattaaaaa
ttgcagACCAATTGCCTTTCTATTTTACATTTTGTCATTAGTTTTACATA
AGATTCCactttccgcactaagattcctttgccactttactatcggaaaa
agaccaggactgcgagttgaaaaatgagcttcggaaagttaggcagtttc
gtAAGAAATAAGCACACTGGAAAATCTTCCGTACCgttcagaaaaaaaca
ttttcaatctCATCCATCCGTTATCCCGGGAAAATTCCGGAAAAGTCAGG
AGAATGCTAGTGCGGGAAGTGGAATCTTCTGCAAAACGACGTTATGATTT
TTActaatttccaaaatattttgttaaaatgtcTTTAATTAAGATATACT
AGTTCGTatgaaaaaatatgaagaaataTCCAGCTCGGATACAAAtattt
acatttcaaaatatacaAATATACAAGAAAATACTGCGTTGAAATAATTT
ACAAAGTTTAACGTCCCGATCCTCCTATCCAGCGCAAGACACAGGAACGG
GACATCAAAATAATTCATTCTACTCCATAGAGCGTCAAACTATTCTGATA
GAAAAATACTAGGAAAACATGAAAACTCAAGACTCCAGAATTGCTATTAC
ACTGGTGCAACCTTGAACCCCAAAGCCATTCACTAGAAAGCAGATGAATA
ATAATGttaggggccatccatatagtacatacgcagtgaaggggggagaa
aGTGGTTTAGTAAAAGTGTACGTCTAttgtttgaatgacgtcatttctat
tgttctctgcgtacaagggggaagGGGGTGTCAaacatttggaaaatttt
tgcgtacgtactatatggatggccccttaGTATGCTATTCTTAATTGCTT
CTTGAAAGATACAATCGTCTCATAACAAGGCCTGGGTTCGAGGTTGATTA
AACGAGAACACGTACGATTGGTTGATACGTCCATAATGGATTCAGTTATC
CACCGTTAAATTTGATGTGAAATCAAAAGTTAACGATGAGCAACCTGATC
AATATCGGATCTCACCTCTCgcttgtgacgtcatcgatATGTTGCTGTCC
TGTTGATGGTCCCGGAGAGTCTTGAACTCGGTTTCCTACACAAttgtaac
acccctgtctcagtgcttAAGCGTAGAATTtcg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00062121-exon-scaffold_361-1491911889:1037477..1038659 | TCONS_00062121-exon-scaffold_361-1491911889:1037477..1038659 | Clytia hemisphaerica | exon |
| TCONS_00062121-exon-scaffold_361-1510915933:1037477..1038659 | TCONS_00062121-exon-scaffold_361-1510915933:1037477..1038659 | Clytia hemisphaerica | exon |
| TCONS_00062121-exon-scaffold_361-1575043694:1037477..1038659 | TCONS_00062121-exon-scaffold_361-1575043694:1037477..1038659 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_361 | supercontig | scaffold_361:1037477..1038659 . |
Blast
The following BLAST results are available for this feature:
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