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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00062104 ID=TCONS_00062104|Name=TCONS_00062104|organism=Clytia hemisphaerica|type=transcript|length=1157bp
aagtaattgccttattaattaaaaaatcttaaaaataaaaattctataAG
ATAATAGTTGGTAAATCCATGTGATTGTGATCCTATTGAgttagtaaata
aaaaaatttaaaattttatagaATAACCATCACTATGGCTGAATTAAACT
AAACGACccaaaaaagataaagaaaatataCCAGAATctaatataaataa
aaatatattacactCAAAGCTACCCGAAAATAAAGGATTTGCATCTGCAG
AATCAAAATGTGTAATCAAGGATGCTGAAAGAAATGACAAAGAGGAGGAA
CAAAGCAGCAGAAATTTGATAGATGATTCAGAGAGTGAATCTGATGAAAG
TGATGCATGGTCAGAGAGCACTGGAGGTGAGAAGGTTGTTTCCAGTGATG
ATAATGAAGATCTTGATTCAGAAGATGAAAACAACACTGTTATTGAATTT
GATATAGGGGGTAACCATAAGTATCAATGTGATAATGGTGGacgatttca
aaaatattatgtTGACGATGATGGTACAGAGTTTTATGGAAGTCAAAATC
AAGCACACCAAAGAGGCTTGAGCTGGAGTCAGAACGGGCACTATACATGT
TGCAGCGCTGTTTTAAATAACACCTCCTACAAGTTCAAATTGGAGCCTTG
GAATGAGTTTGACAAAAATGCGGTGAAAATTATTGGTAAACAAACGAAGG
AAATGGTGGGTTATGTACCTCGACCAGACAATTTGGAAGTCAAGAAATGG
TTGGATAAGCAAAAAACAGATGATGGTATTGTTATTGCTGGTAAGAGAAG
TTGTGGAAGAGTACTTGAAATAACATGTGTtattaataaaaaataacaag
gactgctttacttttaaaatctttagagATGATTTCATACTTTTAGTCTT
ATGATCAGTTTTAAACATTGCACATTCTTTTTTATCATAAACATTTTTAA
CCTAAACATAATGCCACGAGGCTACATTTTATGAGTATAACACTAGTTAA
AAAGACATaaactttatgaaattaaaccatgactttcttttgtttaaaat
tatAATCATTTTAAACCAGATTTTGTCCAAAGAAAGCATCCATTTTGTAT
TCCAACCTTTTTGGGGATGAACATTAGGCATAATTGTTTCTTTAAAACGC
ACCAAAG Run BLAST on NCBI transcript from alignment at scaffold_361:542872..544028 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00062104 ID=TCONS_00062104|Name=TCONS_00062104|organism=Clytia hemisphaerica|type=transcript|length=1157bp|location=Sequence derived from alignment at scaffold_361:542872..544028 (Clytia hemisphaerica)
CTTTGGTGCGTTTTAAAGAAACAATTATGCCTAATGTTCATCCCCAAAAA
GGTTGGAATACAAAATGGATGCTTTCTTTGGACAAAATCTGGTTTAAAAT
GATTataattttaaacaaaagaaagtcatggtttaatttcataaagtttA
TGTCTTTTTAACTAGTGTTATACTCATAAAATGTAGCCTCGTGGCATTAT
GTTTAGGTTAAAAATGTTTATGATAAAAAAGAATGTGCAATGTTTAAAAC
TGATCATAAGACTAAAAGTATGAAATCATctctaaagattttaaaagtaa
agcagtccttgttattttttattaataACACATGTTATTTCAAGTACTCT
TCCACAACTTCTCTTACCAGCAATAACAATACCATCATCTGTTTTTTGCT
TATCCAACCATTTCTTGACTTCCAAATTGTCTGGTCGAGGTACATAACCC
ACCATTTCCTTCGTTTGTTTACCAATAATTTTCACCGCATTTTTGTCAAA
CTCATTCCAAGGCTCCAATTTGAACTTGTAGGAGGTGTTATTTAAAACAG
CGCTGCAACATGTATAGTGCCCGTTCTGACTCCAGCTCAAGCCTCTTTGG
TGTGCTTGATTTTGACTTCCATAAAACTCTGTACCATCATCGTCAacata
atatttttgaaatcgtCCACCATTATCACATTGATACTTATGGTTACCCC
CTATATCAAATTCAATAACAGTGTTGTTTTCATCTTCTGAATCAAGATCT
TCATTATCATCACTGGAAACAACCTTCTCACCTCCAGTGCTCTCTGACCA
TGCATCACTTTCATCAGATTCACTCTCTGAATCATCTATCAAATTTCTGC
TGCTTTGTTCCTCCTCTTTGTCATTTCTTTCAGCATCCTTGATTACACAT
TTTGATTCTGCAGATGCAAATCCTTTATTTTCGGGTAGCTTTGagtgtaa
tatatttttatttatattagATTCTGGtatattttctttatcttttttgg
GTCGTTTAGTTTAATTCAGCCATAGTGATGGTTATtctataaaattttaa
atttttttatttactaacTCAATAGGATCACAATCACATGGATTTACCAA
CTATTATCTtatagaatttttatttttaagattttttaattaataaggca
attactt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00062104-exon-scaffold_361-1491911889:542872..544028 | TCONS_00062104-exon-scaffold_361-1491911889:542872..544028 | Clytia hemisphaerica | exon |
| TCONS_00062104-exon-scaffold_361-1510915933:542872..544028 | TCONS_00062104-exon-scaffold_361-1510915933:542872..544028 | Clytia hemisphaerica | exon |
| TCONS_00062104-exon-scaffold_361-1575043694:542872..544028 | TCONS_00062104-exon-scaffold_361-1575043694:542872..544028 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_361 | supercontig | scaffold_361:542872..544028 . |
Blast
The following BLAST results are available for this feature:
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