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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00062095 ID=TCONS_00062095|Name=TCONS_00062095|organism=Clytia hemisphaerica|type=transcript|length=919bp
GTTGgaaacaacatcaaaaacaCAAACACAATCTTTGAAAGTTGTAAAAG
CTAAAgtatataataaataaaatatgacGTTCCTGAAATTCTctgaagaa
atagaaaattctGATTGAGGTTTCATAGAATATAAAAAGTATTAGTTTGG
GTACGTGCCTGAGATTTTAAAACATTCATAAAGACACAAGTATATTATCT
TCTGGAAGCAAACTAAAGCATCCACTTATAACGACACGTGGAATTTATCA
ACATCACTCAAGGTATTGCCAAAAGTGTTCGAGATGGCAGGTTATGAGTC
CAATAGAGACAGTGTGAACGATTTCTGGTTTGCTCCAGTCAAGTTTATCA
ATTTGAAACACGAGGTTGTGAATAATCGAggcaaaatccgccattatCAT
TCAGTGGCACGTTGCAAAATACAAATACTAAGTTTAGAACAACAAAGAAT
GGTtaagaatttccaaaaaaaacttaGTCAAAGCGAAAagattattttac
agaccgaACAAACTCGGGATAGAATTGAACGAAAACGATACTCAATGGTT
GCTAAGCGACACGAAAACAACGAGGAGATGAAAATTGCTCGCGCAAAAAG
CTTCGAAGATAACCTAGTCAGACTTAAAACACCACCATGGAAATCACAGC
CCCGAGCGAAAACAACACCTGCCAATGTTCGGGTAAATACACAGACCACC
CAAAGAAATACCCGATCAAAATCGAGAGAAACGATTCGAAAAACGAAAGA
TCGATTCGATGATGGAGCGAGGACTGTGTTCGCTTCTTTCCCGAGGATCA
AAGAAGCATGGGTGGTCAATGCCAGTGATTTGACGTCACACACCTATTTG
AAACGGTTCGAGAAGAATTTAACTGAAGAGACATATACAAGACATAATTT
ACAGTTATATCAATTGAAA Run BLAST on NCBI protein sequence of TCONS_00062095-protein >TCONS_00062095-protein ID=TCONS_00062095-protein|Name=TCONS_00062095-protein|organism=Clytia hemisphaerica|type=polypeptide|length=212bp
MAGYESNRDSVNDFWFAPVKFINLKHEVVNNRGKIRHYHSVARCKIQILS
LEQQRMVKNFQKKLSQSEKIILQTEQTRDRIERKRYSMVAKRHENNEEMK
IARAKSFEDNLVRLKTPPWKSQPRAKTTPANVRVNTQTTQRNTRSKSRET
IRKTKDRFDDGARTVFASFPRIKEAWVVNASDLTSHTYLKRFEKNLTEET
YTRHNLQLYQLK Run BLAST on NCBI transcript from alignment at scaffold_361:281092..282010 Legend: exonCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00062095 ID=TCONS_00062095|Name=TCONS_00062095|organism=Clytia hemisphaerica|type=transcript|length=919bp|location=Sequence derived from alignment at scaffold_361:281092..282010 (Clytia hemisphaerica)
TTTCAATTGATATAACTGTAAATTATGTCTTGTATATGTCTCTTCAGTTA
AATTCTTCTCGAACCGTTTCAAATAGGTGTGTGACGTCAAATCACTGGCA
TTGACCACCCATGCTTCTTTGATCCTCGGGAAAGAAGCGAACACAGTCCT
CGCTCCATCATCGAATCGATCTTTCGTTTTTCGAATCGTTTCTCTCGATT
TTGATCGGGTATTTCTTTGGGTGGTCTGTGTATTTACCCGAACATTGGCA
GGTGTTGTTTTCGCTCGGGGCTGTGATTTCCATGGTGGTGTTTTAAGTCT
GACTAGGTTATCTTCGAAGCTTTTTGCGCGAGCAATTTTCATCTCCTCGT
TGTTTTCGTGTCGCTTAGCAACCATTGAGTATCGTTTTCGTTCAATTCTA
TCCCGAGTTTGTtcggtctgtaaaataatctTTTCGCTTTGACtaagttt
tttttggaaattcttaACCATTCTTTGTTGTTCTAAACTTAGTATTTGTA
TTTTGCAACGTGCCACTGAATGataatggcggattttgccTCGATTATTC
ACAACCTCGTGTTTCAAATTGATAAACTTGACTGGAGCAAACCAGAAATC
GTTCACACTGTCTCTATTGGACTCATAACCTGCCATCTCGAACACTTTTG
GCAATACCTTGAGTGATGTTGATAAATTCCACGTGTCGTTATAAGTGGAT
GCTTTAGTTTGCTTCCAGAAGATAATATACTTGTGTCTTTATGAATGTTT
TAAAATCTCAGGCACGTACCCAAACTAATACTTTTTATATTCTATGAAAC
CTCAATCagaattttctatttcttcagAGAATTTCAGGAACgtcatattt
tatttattatatacTTTAGCTTTTACAACTTTCAAAGATTGTGTTTGtgt
ttttgatgttgtttcCAAC Coding sequence (CDS) from alignment at scaffold_361:281092..282010 >TCONS_00062095 ID=TCONS_00062095|Name=TCONS_00062095|organism=Clytia hemisphaerica|type=CDS|length=636bp|location=Sequence derived from alignment at scaffold_361:281092..282010 (Clytia hemisphaerica)
TTTCAATTGATATAACTGTAAATTATGTCTTGTATATGTCTCTTCAGTTA
AATTCTTCTCGAACCGTTTCAAATAGGTGTGTGACGTCAAATCACTGGCA
TTGACCACCCATGCTTCTTTGATCCTCGGGAAAGAAGCGAACACAGTCCT
CGCTCCATCATCGAATCGATCTTTCGTTTTTCGAATCGTTTCTCTCGATT
TTGATCGGGTATTTCTTTGGGTGGTCTGTGTATTTACCCGAACATTGGCA
GGTGTTGTTTTCGCTCGGGGCTGTGATTTCCATGGTGGTGTTTTAAGTCT
GACTAGGTTATCTTCGAAGCTTTTTGCGCGAGCAATTTTCATCTCCTCGT
TGTTTTCGTGTCGCTTAGCAACCATTGAGTATCGTTTTCGTTCAATTCTA
TCCCGAGTTTGTtcggtctgtaaaataatctTTTCGCTTTGACtaagttt
tttttggaaattcttaACCATTCTTTGTTGTTCTAAACTTAGTATTTGTA
TTTTGCAACGTGCCACTGAATGataatggcggattttgccTCGATTATTC
ACAACCTCGTGTTTCAAATTGATAAACTTGACTGGAGCAAACCAGAAATC
GTTCACACTGTCTCTATTGGACTCATAACCTGCCAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00062095-exon-scaffold_361-1491911889:281092..282010 | TCONS_00062095-exon-scaffold_361-1491911889:281092..282010 | Clytia hemisphaerica | exon |
| TCONS_00062095-exon-scaffold_361-1510915933:281092..282010 | TCONS_00062095-exon-scaffold_361-1510915933:281092..282010 | Clytia hemisphaerica | exon |
| TCONS_00062095-exon-scaffold_361-1575043694:281092..282010 | TCONS_00062095-exon-scaffold_361-1575043694:281092..282010 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_361 | supercontig | scaffold_361:281092..282010 . |
Blast
The following BLAST results are available for this feature:
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