TCONS_00062078 (transcript) - C. hemisphaerica

Overview
NameTCONS_00062078
Unique NameTCONS_00062078
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2063

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00062078 ID=TCONS_00062078|Name=TCONS_00062078|organism=Clytia hemisphaerica|type=transcript|length=2063bp
TTAGAATTGGTTTTGAGAATTTCGTTTCGCAAAGAAAGCGAACCATATAT
TTTCAATCTTCAACGGTTACGAGAGCTTACCAAGGATGAAAGATCATCGA
AAATCACACATGCATAACAAATGCTTTGAACCTGTCACTGTCTCAACTCT
CGCCAAATACTCCAACGATGTTAATGAAGGACATTCTAAAGCACAACACT
TCACTTATGGTGCCATACCGGGAGGTGATCAGAACAACCGTTTAATTTAC
GGAAGTCTCGATTCATACGGAATCGACCTCAACAACATCAAACCGAAACC
GAAAGCTGCACAAGTCAAGAAGTATTACCAAACACCGGACAGTTTCGTAT
ACGGACAACGTGACTTTTTGTACAACCAACAAAACCAACCAGCTAGTAAA
AAACTCTCCAACATTTTCTCCATGGAAGAGAGAACTTCTGCGGAAAtgag
aaagaaacaaaaagaagtCGAGAACACAGAAAAAGAATACCACcgataca
aaaaagaaaaagaagaaaatcgaaAACGAATCGAGGACGAGAAAAGAAGG
GACCATGAAATGTTGACGGCTTACAAAGCGCCATGGGGGAAGGCCGGGGG
TGGAGCCCCAAACGAACGTCACGAGAGAAGCCAACAAGTGAGACGCCTTC
TCGACGATAAAGAGCAAACATTCCCTTTCGGTCGACCAGGTGCTGGTGCA
CCATTGAAAACGAACTCTGGAAATTTGAAGACAGGTCTGTCGGCAGATCC
AGAAATTCGTTTTCAGAAGCGTGATCGAAATCAAATTCACAATGTGGTCA
ATCCAGAGGGACGAGCGGAAAAAGAACATCGCAAGTTTCCTTATGAAACT
AACCTTGACATCCTTGCTCATGAAACACGTGCTCAACGCAAAGTTTTGAA
ACGCAATGAAGATATGTCAGTGAGTGTTTATGACCCGTTCGGTCGACCTG
GTGCAGGTGCTCCATTGCGGGATGACCAAGGTAAAACTCAAGTAGCTCGT
TCAAGAAACCTCATCAGAACTGTCAAAGGAGATGATGACGGTGACAACCA
TTTAACTGACGCTTCTCTTCAATATGGAACGCCAAGGTtgaagaaagaaa
tcaaaaataaagatCAGACTGGTTTTTACGGTGGTTTCGGCCGTGCTGGA
GGAGGTGCTCCAAACTTCGGGAATGATGGCATCGTTCAAACATCCAAACG
TCAAATGTTCGTAACCGCTGGTGATGGAGCGGTGATAAAGACCACGTCTG
ACGAATCTTTAGACTTTCGTGGTGGCGGCGGTGCTCCGATACGTGATTCT
AACGGTAACTTTGTGGCCGCCGTCAGCGGAAAGTTGTCTAATGAAGAAAT
GGGTTATACTTCACATTCTCAACTTGGTGATATGGAAAGTCGAAAAAGTT
ATCTTGAGGCTCTCCGTCAGCAAGCAGAAGAAcatgaaaatttgaaacgt
tTACAAAAATCTGAACAGAACCAACAGtcgGTAGACACGGGTTCTTGGAT
AAAACAAGGGAAAGTTGGACGCTACCCTGTTGATTCTTCCACTCATCAAG
TGATGGGCGCTCCACGACTCACATCTGATATCGTCAAACAACGTTATGAG
ATCAAAAGAGAAGATCCTTCCAAATCGAAAGAATACCACGAAGCGCTTGA
CCATCACGCTAGATTACATGAACAGTCTAAACAACTGGAGTTGCGACAAG
AACGAGAACGATCTGTCGAGCACGCTCGCACGATGGATGCAGTCTGGGGG
AAACCAGGCCACGGTGCTCCATCAGACAATTCACCACGAAGAAGGAAACA
TATAGAGGTAGACAATGAGTCAGTTCACCAAGTCGACCAACCTAACAAAT
ACATGCGTATATCAACTCATGATAACCCGATTCCCGATTACACTGATTAC
CCGTATTCCCCGACTCATTCCGATTCGGGCGATACAGTTCAGGAGAAGAC
AGTCAGTTATGTGAGACGAGAGAAAGATAAGATCAAGGGTCTGAACATCC
TTCAGAGTGTCGTCCAACATGAGAAAATCTCCAACAATAACAGCCGACAT
CAAGCATATCGCG
Run BLAST on NCBI

transcript from alignment at scaffold_361:1666764..1680504-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00062078 ID=TCONS_00062078|Name=TCONS_00062078|organism=Clytia hemisphaerica|type=transcript|length=13741bp|location=Sequence derived from alignment at scaffold_361:1666764..1680504- (Clytia hemisphaerica)
TTAGAATTGGTTTTGAGAATTTCGTTTCGCAAAGAAAGGTTTTGTAGCAT
TGCACTCTTTTTTGTAAACTTTAAGCCTCAAATTGTTCTTATATTCTGTT
CTTAATTTCAACGTAAATTTCAGGATCCTTAATGCAGAAAATTTTGCTAT
TCCAAGCGGAGGATTGTTCTTAAATTGTTCTTAATTTTTTAGCATTTTTG
AGCCTCATTGTTCTTACTGTATTCGATAAATAAAAAAGGATATCCCAGAG
ATTTTCTAAATCTTCTCACTCAGCTCACCAATACAAAAAACCCTTGTCAC
TCGCTGAGATGGAAATAAGAAAATCAGTCCCCCTTTCAGGTAATATAAGA
TGTATGTAAATGAAAAAATCTCGCACGAGGAACATTTTCTGAGAGAGAGG
GGGTAATCAGTGCAAAGACAGCGTGATGTTTTTATCATACAAAAGACCAA
CAAAAGATCTGATTTCAAAGATCTCATTAAATATTTTTAATGATTTATGA
AATGTTTGATGATACCATGGTTACTAATGTTGTTGTAATGAGGGCCGTAT
ATTTAGCTAGATAGAGAGAAGAAGCTAAAAAATACAAGTTGAGAGAAAAT
TATAGAGACGAAATATTGATGTATATATATTTGTTGTGTTTGTAAGATTT
TGGATCGCAAGGCGATTGTTATTCGATAGTGTTTGACTTTTCATAGACTT
CCTCTATATTACTTTCTATTTCTGAGTATTTCTTGTACAGTATGTAATAA
CTTTTGAGGTGAGACGGAAACTTAAACTGTAAACAAATAATAATATTCCA
AAAGGGAAGCTGGCTGATCATTTGAAAGAATTTGATATTTTGAAACCTGA
GATCATCCTCGAGATTTTTAGAATATTTTTTAACAAATGTCTAGTATTTA
TTACAAAGTTTCTGAGTTTTTATTGGACTGTGGTCTTTTAGCTTTGTATG
ACACAATGTGTTGGAAAAATGTTGCAGTTTTTTGTCATGTTTGGAGTAAA
TTTGTTGTTTACATAGTTGATTTTATTGTCAAAATTACGGATAAAAATTA
AGTACAAAATATTCTTTGTGTTTCAGCGAACCATATATTTTCAATCTTCA
ACGGTTACGAGAGCTTACCAAGGATGAAAGATCATCGAAAATCACACATG
CATAACAAATGCTTTGAACCTGTCACTGTCTCAACTCTCGCCAAATACTC
CAACGATGTTAATGAAGGACATTCTAAAGCACAACACTTCACTTATGGTG
CCGTAAGTCAATTCCATCTTAATTCGATTCAAAATCAAACTTCGCTTTGG
TTAAGGTAGTGGTCAGAAAGTATCTACTAGCAGGGGCGGGGGTGTCAAAC
TTTTTTTCCAACCCCTAGAGGGGGGTTCCAATTTTTTTCCATTACTGTAA
TATAGATTTCAAATGTACTAACTAAGTGGCGTACACGTTTTTTTTTTTAT
AAGAACGTCAAAAATTTTCGAAGCCTTCCGATGTTCTTAAATTTTTGGAT
TTGAAGCCTAAAAATGTTCTTAAAATGTTCTTATTTTCAGCATTTTTTGA
GCATTTTGATGTAATTTCTTAAGAAAATGCATGTTTTTAAGTCTCCAAAG
CCTTAGGATGTTCTTAGAATGTTCTTAAATTTTTGGATTTGAAGCCTAAA
AATGTTCTTAAAATGTTCTTATTTTCAGCATTTTTTGAGCATTTTGATGT
AATTTCTTAAGAAAATGCATGTTTTTAAGTCTCCAAAGCCTTAGGATGTT
CTTAGAATGTTCTTAAGTTTTTGGGCCTCGAAGCCTTATGTTCTTATATA
GTTTGTTCTTATAAAAAAAAAACGTGTACCCACCGGGGAATGGCGTATCC
TACCTGCCGTAGGGCGGACGCCCCTCAAAAAATAAAGATTGACTAAAATC
AAATGAGTTTCCCAATAGAATGTGAAGGTGTTTGCAGTTTTTGTGACCTT
TTTCTGGCTACCGATCGATATCCTGTTTTCTTTGTTCAAAGTTTTTATGA
TGAAAGAATAACCAGAAGCTTCATGTTTTTTGAAAACTATATTTTTTTTA
AATGATGTCTGTCTATTAACCCTTTGAGTGCCAGGGTCTTTTTTTCTAAG
TTTTTTTTTTTTAAAATCGCTAGTTCAAACTTTAAGGGCTTATATCTCCT
GATCTAGAAAGAATTAGAAGCTCGTATATAGCTCGTTGGATAGCTTAGAG
TCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNGGAGGGCTTCGCCCTCCTATATAGCCCATGTCGTATA
TATACGACATCGGCACTTAAAGGGTTAAAGCTTTATTGTTTGATCTTTTT
ATCCCAAGTTTCATGAAAAATCTGCGTTTATTAGACTGGTCCCTGTTGAA
ATTGGTCAAAATTAAACAGTCTCAGACTAAAAAATTAGTAGTGGGAAACG
TTGAAAGTTTTATTATATTTCACATAAAGGACGGTTTTAAACGTGTTTGT
TTGTCGCCGTCAATTTCAGATACCGGGAGGTGATCAGAACAACCGTTTAA
TTTACGGAAGTCTCGATTCATACGGAATCGACCTCAACAACATCAAACCG
AAACCGAAAGCTGCACAAGTCAAGAAGTATTACCAAACACCGGACAGTTT
CGTATACGGACAACGTGACTTTTTGTACAACCAACAAAACCAACCAGCTA
GTAAAAAACTCTCCAACATTTTCTCCATGGAAGAGAGAACTTCTGCGGAA
ATGAGAAAGAAACAAAAAGAAGTCGAGAACACAGGTTCGAAATTACATTT
TAACATGCTGTATTTGCTGCCAATAATTATCTCACATTCACCGTAGTAAA
GAGGTCAAATTATCAACGTGACTTCGGCCATAACTCTTTTACGATTTTCA
TCTTAAAATCAGAATTTTGACGAATTTTGATTTCAAGCGCCGATTTTTCG
ATTTTATGAAAAAGAGAAATGGTATGATATCAATGTTATTGTCTTTTTAT
TGTTTAGAAAAAGAATACCACCGATACAAAAAAGAAAAAGAAGAAAATCG
AAAACGAATCGAGGACGAGAAAAGAAGGGTATGTCTCAAAACTTTCACTT
TTACATCCCTGTCTCAAAAAGGGGTGCATCTCAAATCTTTCCTCTTTATC
CCTGTCTCAAAGAAGGGAATGTCTCGCAAATTTCACTTATGCATCCTTGT
CTCAAAAAAAGGTACCGTTTTGACCCCGTGAGATGTTTCGTTTCATAAGA
GATTTCACTTGCCGTTGCTCTTTCTTCATCTCTTGACTTTCCTCCTCTAA
AGAAGGGTATGTTTCAAAATTTTCACTTTTACATCCCTGTCTCAAAAGGA
AGGAATGTCTCAAAACTTTCACTTTTACATCCCTGTCTCAAAAGGAGGAA
ATGTCTCAAAATACTTACTTTTATACCCCTGTCTCAAAACAAAGGAATGT
CTAAAAAATTTTTCGTTGCTCGTTCCTAACCTCTTGACTTTTCATTGCAG
GACCATGAAATGTTGACGGCTTACAAAGCGCCATGGGGGAAGGCCGGGGG
TGGAGCCCCAAACGTAAGTCGCTCATACACAGTTAGCTTGACAAAGACTT
TTTTGAAGTATCGAACTCACACTTGTAATTCAAACCTCTGTAGACGTAAA
CCCAACCACTGTCAATTTTTACTTAGAGATTACTGTAATTTTTCATAGCG
CCTTCAAACATTTTGTATGAATGCTCAATAGAAACCACTCTTTGCGTTTT
CACCTTCATAGATTTTACTTCTATTTTCTCCCAGGAACGTCACGAGAGAA
GCCAACAAGTGAGACGCCTTCTCGACGATAAAGAGGTAAGTCAACTGGAT
GATAAATGTTCTTTATTTTTAACAACAAATCGATCAACCAACAACTCTAC
AAGGTATATGAGATGAAGATCAATAAGATCTAGACAGATGTATATATCAA
AAACCTTTTTTTATTCAGCAAACATTCCCTTTCGGTCGACCAGGTGCTGG
TGCACCATTGAAAACGAACTCTGGAAATTTGAAGACAGGTCTGTCGGCAG
ATCCAGAAATTCGTTTTCAGAAGCGTGATCGAAATCAAATTCACAATGTG
GTCAATCCAGAGGGACGAGCGGAAAAAGAACATCGCAAGTTTCCTTATGA
AACTAACCTTGGTATGGATGATATGATATCATTTTTCCACTTTTAAATCC
AAAAAATATTTTAATTTCCCTTAACTTTTCTGATAACAATAGCCCTTCCT
TTTCCAGACCTTCTTTTACACTGATTTCCTTGCTGTTTCCTTACAAGATT
CTCTGATCCCTTCTGCCATGTTTTTATACCAACTTGCCTGTTTTCAACTC
ATCAACCTCTCTAATCTTCTTTTCAGACATCCTTGCTCATGAAACACGTG
CTCAACGCAAAGTTTTGAAACGCAATGAAGATATGTCAGTGGTGAGTAAT
TCTTCGTTTGTTTGTTTGTTATGAGACGAAATAGCTCGCTGTCCATTAAA
ATACAAGTTTTGAATTACCTTGAGCAACTAAAAGGTTATCTGCATTGTGC
TTCTTACTCGAAACTCTACTGTCTTCTCAGTTCTTCATTGTAAAAATACA
TAAATTGTATGTTATATTGCAATATCTAATTTCTTATTCATAGAGTGTTT
ATGACCCGTTCGGTCGACCTGGTGCAGGTGCTCCATTGCGGGATGACCAA
GGTACGTTCTACTCACAGATATCTGTAAAGCCCGAAGGGCTAGATTTGCG
GCTTTTATCAAAAAGTGAAGCTCGTCTTTGGAAGGATTTCCTACCAGAGT
CACGTGACTAAAATATGCAATTTCACCGGTTTGAGAGATGTGAAATAGCG
TTTGTCGCCTACGTTTTTTTATCTCGCGCTCCGAAAACAATTAAAATGCT
AGATCCTATCCATCGGCACGAAATTTAAAAAGTCAAATTTTTGCTTCACT
TTTTTTTGCTGGAGAAAGCTTAAAGTTGCAAATCTAGCCCTTCGGGCTTA
GATATCTGTGGTTCTACTCTTACGATTTTTAATAATTACATTATTTATCG
GAAAGAAATCAATTCTGAAATCGTTGTCACGGGTCCTAAGACATAAGCCT
TTTACTTGATCTCTATACGTGACATCTATCGCTTTTTAATGTTTTGATAA
TATGATTTTTTTAGGTAAAATGTAGTAAAACTATATGTTTAACATTGCTT
TATAAATATTGTTTAGGTAAAAGGTAAAAAAATATGTTAAACATTGCTTT
ATAAATATTGTTTAGGTAAAACTATATGTTTAACATTGCTTTATAAATAT
TGTTTAGGTAAAATGTAGTAAAACTATATGTTTAACATTGCTTTATAAAT
ATCGTTTAGGTAAAACTATATGTTTAACATTGCTTTATAAATATTGTTTA
GGTAAAACTATATGTTTAACATTGCTTTATAAATATTGTTTAGGTAAAAT
GTAGTAAAACTATATGTTTAACATTGCTTTATAAATATCGTTTAGGTAAA
ACTATATGTTTAACATTGCTTTATAAATATTGTTTAGGTAAAACTATATG
TTTAACATTGCTTTATAAATATTGTTTAGGTAAAATGTAGTAAAACTATA
TGTTTAACATTGCTTTATAAATATCGTTTAGGTAAAACTATATGTTTAAC
ATTGCTTTTAAATATTGTTTAGGTAAAACTATATGTTTAACATTGCTTTA
TAAATATTGTTTAGGTAAAACTATATGTTGAACATTTCTTTATAAATATC
GTTTAGGTAAAACTATATGTTTGACATTGCTTTATAAATATCGTTTAGGT
AAAACTATATGTTGAACATTTCTTTATAAATATCGTTTAGGTAAAACTAT
ATGTTTAACATTGCTTTATAAATATTGTTTAGGTAAAACTCAAGTAGCTC
GTTCAAGAAACCTCATCAGAACTGTCAAAGGAGATGGTAAGCATACTTCA
TCTTTTTTGTTCTATTTCCCTCTCTCATTCTTTTCCATCTTACCTCTAGA
TTCTGTTCATTTTAAAGATTTTAGCTCAAGGTTTCTTCACTATCCCTAAA
ACTAGAGTCATTTTCTCCTTTTACATGATTCGTTGCCCTGCGGAACTAAC
AAACCCTATTTTTTCATTCTCACCAAACTTAGCTTCTTTTTCACCATAGA
TGACGGTGACAACCATTTAACTGTAAGTTATCGATTCAATTCCCATACTT
GATGATAACGTCTCTCGCTTTTCCTTACTTTGCAATTCTTCCCTAGCCTC
ATGAGTTAACGTTCACATGTTCCATTTTCAAAAATTTACTGCCTTGATAG
TTCCTTGTAACTCAAATTTCTGCGTTGAACTTGAAAAATTCGATAGACTT
TGAATACGATAAAGTATTGCACACACACACAAGTTCCATATAAGTTATTT
TACCTCATTTCGATTCCAACATTTTGACCTGACAACAAATGTTCTTTTTT
AGGACGCTTCTCTTCAATATGGAACGCCAAGGTTGAAGAAAGAAATCAAA
AATAAAGATCAGGTAAGGACAACGACCTGTCATGTGCCTTATCTAAGGAT
AATTTAAAAGTTCGTCAATATCTCGTCCAAGGATTTTTTATGCCGCACTC
AAATTGAAATGACATTCTTGAGAAGTATAAAGATGATTCGAAATTTTCTT
GCCGCTTTTTTACAATCCTTATAATATCAGGTCTATAATACACAGAGATG
ACTGCAATATAGCTATTAAATATCAATTCTTTCAGACTGGTTTTTACGGT
GGTTTCGGCCGTGCTGGAGGAGGTGCTCCAAACTTCGGGAATGATGGCAT
CGTTCAAACATCCAAACGTCAAATGTTCGTAACCGCTGGTGATGGAGGTA
CGCTTGAACTTCATTTAGTGTTTTTTTTTTGCTTAATTATATCCGGAACA
CTGACCTATATTACAGCCCTGGACTAAGCTACATCCAGACTTTTTTATAA
TAGTGGTATTTGTTCGCGTAAGTATTCTCCGTCTCATCCAGGTAACACAG
ACATTCAGTATTATTTCTATACAGTACTATCATCTTTGATTTTTGTTGAC
CAAAATTGAGTAACTGCCACCAGGATTTAAACAAAGCTGATTCTACCAAA
CAATGCATTTTATGGAATATTCTTTTATCTTCTAATTAAATCATTTTATT
TTCTTAGCGGTGATAAAGACCACGTCTGACGAATCTTTAGACTTTCGTGG
TGGCGGCGGTGCTCCGATACGTGATTCTAACGGTAACTTTGTGGCCGCCG
TCAGCGGAAAGTTGTCTAATGAAGAAATGGTAAGTTTGAACTGAAAAACT
GCTATGAGATAATATTAGTTTGTGTATTATGACTGATTTTCTTTCAGTAT
TCCTTGAAATTATGCATGCAGGATGATGTTAGATTGAGTGCAATTTTGAC
GAAGTACCTCTTTAGAAAATACCATGCCATTATAACATACCTTGACTTTG
AATCCCGATCTTCTTTATTTTTTCTGTTTGGTTAATTCCAGACTCGTGTT
CTTATGAAATTATTCTCGTTATTCTTGCCAACTTTCTTTTCAGGGTTATA
CTTCACATTCTCAACTTGGTGATATGGAAAGTCGAAAAAGTTATCTTGAG
GCTCTCCGTAAGTTTCCATAACTTTCTGATTTAATCTGTCCATAATATGT
TAGGCCATAAATATACGTCATTATTCGTAAATATTACCCATGTTTGCATA
TGGACCTTGAGACCTTGAGCTGCTTTAACGGGTCGCTGTCAAATGGCGCA
TGAGTGTGACAAGGCGTGTGGCACTCCTTAGATGTAACAAAGTGTTTAGG
GCTAGGAGTTTATAATTATGCTAAACTTGGCTAACTTTCTACTTTCAATC
TTATAGGTCAGCAAGCAGAAGAACATGAAAATTTGAAACGTTTACAAAAA
TCTGAACAGAACCAACAGGTAAGAAAATTGTGTTATGAGGCAAACAGGAG
CTCTTTTTAACTCAGGGGCGAAGACAAACAATTCACTAAAAAACTACAAA
AGTTATTAAAAGCTATTGGACGCGATTCGTGAGTTAGGGGTCTTCAGCAC
TGACCTTTATATATCCCTGGACCATACTACTCAATGCCGGCCAAGCAAAG
TATTATGATCGGAGTTTTTTTTAAATTGGTACCCGCGGAGAGAGCGTTAT
ACCTAGTTTCGCTTGTACGCTAATGATGTAGCGCCGTTTGTCGTTGGACA
AAGTTTCAAACACTACAATGGCTTCTTTGGCAACTTTCAAACAAACTTCG
ACCAAAGATGGCGGATATAGCTTGGTCCAGGGATTTATAAAGGCTAGTGG
TCTACAGGAGGAACACTTGTCTACAGATCTTTATCTTTTCCTAAAGAAAA
GTAACGCTGATTTTTCTTTTTTTTCTTTTAGTCGGTAGACACGGGTTCTT
GGATAAAACAAGGGAAAGTTGGACGCTACCCTGTTGATTCTTCCACTCAT
CAAGTGATGGGCGCTCCACGACTCACATCTGATATCGTCAAACAAGTGAG
TCTTTTATTTATTAAATGAGAACCTTAAAGACATGCAAGTAATAATCAAG
TGTAGCTTAAAACAGAGTCTAAAGAATCAGACTGTCGTTCGGTTTCCCAA
CTCGAGCCCCAACTATCAGTGACTTGTTATCTCTTGAATTGCATCTTGAC
AAGCTTTACCAACCTATTTTTTCCCAGGGCGGGCTAAAACTCCTCATATC
AAATCTGACTGGGTTCTCTTAGTTATTTATTCACTTCTTCGGCTTGGTAC
GACTTCTTATAATCTTACTTTTAAAACCTTTGAACTCACTTTAAACTCAC
TTGGGAATTTGACCCCGACTTAACAACTCTCTGTTGTTTTGTAGCGTTAT
GAGATCAAAAGAGAAGATCCTTCCAAATCGAAAGAATACCACGAAGCGCT
TGACCATCACGCTAGATTACATGAACAGTCTAAACAACTGGAGTTGCGAC
AAGAACGAGAACGATCTGTCGAGGTGAGCTGATTTCCTCATTATTCGTTA
TATTGTATTTTTTACTTATACACGTTTAATGCCTTGATCAGAAACATTTG
AATCATTTATCTCACTGCGTATAAGCCTTGACAAGACTTCTGAAAGACTT
AGTTTAATACTTTATTAAGTTCTTCGAGTCAGGAAATATATTCGTTTAAG
TCTTACCAGGTCTTGCTTTTAATGTNTTTCGAGTCCGGAAATATATTCGT
TTAAGTCTTACCAGGTCTTGCTTTTAATGTTGACTTTGTTTATAATTCAA
ATACCTCCCTCTTTTTCCGCAGCACGCTCGCACGATGGATGCAGTCTGGG
GGAAACCAGGCCACGGTGCTCCATCAGACAATTCACCACGAAGAAGGAAA
CGTAAGTTGTTGTACATCAGTTCCTTTTCATAGCATTTTGCTGTAGTTTG
ATTGGAAGTGGTTAGGTGACAATTAGCTCTCTCTGANTCTTTCGTAGCAT
TTTGCTGTAGTTTGATTGGAAGTGGTTAGGTGACATACAATTAGCTCTCT
CTGATTCTCTGAGTCATCTTTTAGACTCCAAGCGAATGCTAGCTAAAGAA
ATAGAATTTTTTAGTTCACTTCTTTTTTTCTGACGGATGTATTCTGACAC
ATTAGAAAAACAGTTTTCATCAGTTAACTGACTTGGAAAGTCTTAAAAAT
GATTGACGCTTAAGTTGTAGCTAGAGTTGTAGAAACCGCGAAAGTCAATA
GATAGATCACTCGTTCTCCATTATTAGATATAGAGGTAGACAATGAGTCA
GTTCACCAAGTCGACCAACCTAACAAATACATGCGTATATCAACTCATGA
TAACCCGATTCCCGATTACACTGATTACCCGTATTCCCCGACTCATTCCG
ATTCGGGCGATACAGTTCAGGAGAAGACAGTCAGTTATGTGAGACGAGAG
AAAGATAAGATCAAGGGTCTGAACATCCTTCAGAGTGTCGTCCAACATGA
GAAAATCTCCAACAATAACAGCCGACATCAAGCATATCGCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_038902XLOC_038902Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00062078-exon-scaffold_361-1575043694:1680467..1680504TCONS_00062078-exon-scaffold_361-1575043694:1680467..1680504Clytia hemisphaericaexon
TCONS_00062078-exon-scaffold_361-1575043694:1679253..1679428TCONS_00062078-exon-scaffold_361-1575043694:1679253..1679428Clytia hemisphaericaexon
TCONS_00062078-exon-scaffold_361-1575043694:1673971..1674235TCONS_00062078-exon-scaffold_361-1575043694:1673971..1674235Clytia hemisphaericaexon
TCONS_00062078-exon-scaffold_361-1575043694:1673677..1673747TCONS_00062078-exon-scaffold_361-1575043694:1673677..1673747Clytia hemisphaericaexon
TCONS_00062078-exon-scaffold_361-1575043694:1673192..1673254TCONS_00062078-exon-scaffold_361-1575043694:1673192..1673254Clytia hemisphaericaexon
TCONS_00062078-exon-scaffold_361-1575043694:1672920..1672970TCONS_00062078-exon-scaffold_361-1575043694:1672920..1672970Clytia hemisphaericaexon
TCONS_00062078-exon-scaffold_361-1575043694:1672594..1672786TCONS_00062078-exon-scaffold_361-1575043694:1672594..1672786Clytia hemisphaericaexon
TCONS_00062078-exon-scaffold_361-1575043694:1672314..1672378TCONS_00062078-exon-scaffold_361-1575043694:1672314..1672378Clytia hemisphaericaexon
TCONS_00062078-exon-scaffold_361-1575043694:1672054..1672111TCONS_00062078-exon-scaffold_361-1575043694:1672054..1672111Clytia hemisphaericaexon
TCONS_00062078-exon-scaffold_361-1575043694:1670819..1670872TCONS_00062078-exon-scaffold_361-1575043694:1670819..1670872Clytia hemisphaericaexon
TCONS_00062078-exon-scaffold_361-1575043694:1670583..1670605TCONS_00062078-exon-scaffold_361-1575043694:1670583..1670605Clytia hemisphaericaexon
TCONS_00062078-exon-scaffold_361-1575043694:1670243..1670302TCONS_00062078-exon-scaffold_361-1575043694:1670243..1670302Clytia hemisphaericaexon
TCONS_00062078-exon-scaffold_361-1575043694:1669908..1670019TCONS_00062078-exon-scaffold_361-1575043694:1669908..1670019Clytia hemisphaericaexon
TCONS_00062078-exon-scaffold_361-1575043694:1669476..1669597TCONS_00062078-exon-scaffold_361-1575043694:1669476..1669597Clytia hemisphaericaexon
TCONS_00062078-exon-scaffold_361-1575043694:1669148..1669211TCONS_00062078-exon-scaffold_361-1575043694:1669148..1669211Clytia hemisphaericaexon
TCONS_00062078-exon-scaffold_361-1575043694:1668837..1668898TCONS_00062078-exon-scaffold_361-1575043694:1668837..1668898Clytia hemisphaericaexon
TCONS_00062078-exon-scaffold_361-1575043694:1668260..1668373TCONS_00062078-exon-scaffold_361-1575043694:1668260..1668373Clytia hemisphaericaexon
TCONS_00062078-exon-scaffold_361-1575043694:1667782..1667910TCONS_00062078-exon-scaffold_361-1575043694:1667782..1667910Clytia hemisphaericaexon
TCONS_00062078-exon-scaffold_361-1575043694:1667404..1667482TCONS_00062078-exon-scaffold_361-1575043694:1667404..1667482Clytia hemisphaericaexon
TCONS_00062078-exon-scaffold_361-1575043694:1666764..1667027TCONS_00062078-exon-scaffold_361-1575043694:1666764..1667027Clytia hemisphaericaexon
TCONS_00062078-exon-scaffold_361-1510915933:1680467..1680504TCONS_00062078-exon-scaffold_361-1510915933:1680467..1680504Clytia hemisphaericaexon
TCONS_00062078-exon-scaffold_361-1510915933:1679253..1679428TCONS_00062078-exon-scaffold_361-1510915933:1679253..1679428Clytia hemisphaericaexon
TCONS_00062078-exon-scaffold_361-1510915933:1673971..1674235TCONS_00062078-exon-scaffold_361-1510915933:1673971..1674235Clytia hemisphaericaexon
TCONS_00062078-exon-scaffold_361-1510915933:1673677..1673747TCONS_00062078-exon-scaffold_361-1510915933:1673677..1673747Clytia hemisphaericaexon
TCONS_00062078-exon-scaffold_361-1510915933:1673192..1673254TCONS_00062078-exon-scaffold_361-1510915933:1673192..1673254Clytia hemisphaericaexon
TCONS_00062078-exon-scaffold_361-1510915933:1672920..1672970TCONS_00062078-exon-scaffold_361-1510915933:1672920..1672970Clytia hemisphaericaexon
TCONS_00062078-exon-scaffold_361-1510915933:1672594..1672786TCONS_00062078-exon-scaffold_361-1510915933:1672594..1672786Clytia hemisphaericaexon
TCONS_00062078-exon-scaffold_361-1510915933:1672314..1672378TCONS_00062078-exon-scaffold_361-1510915933:1672314..1672378Clytia hemisphaericaexon
TCONS_00062078-exon-scaffold_361-1510915933:1672054..1672111TCONS_00062078-exon-scaffold_361-1510915933:1672054..1672111Clytia hemisphaericaexon
TCONS_00062078-exon-scaffold_361-1510915933:1670819..1670872TCONS_00062078-exon-scaffold_361-1510915933:1670819..1670872Clytia hemisphaericaexon
TCONS_00062078-exon-scaffold_361-1510915933:1670583..1670605TCONS_00062078-exon-scaffold_361-1510915933:1670583..1670605Clytia hemisphaericaexon
TCONS_00062078-exon-scaffold_361-1510915933:1670243..1670302TCONS_00062078-exon-scaffold_361-1510915933:1670243..1670302Clytia hemisphaericaexon
TCONS_00062078-exon-scaffold_361-1510915933:1669908..1670019TCONS_00062078-exon-scaffold_361-1510915933:1669908..1670019Clytia hemisphaericaexon
TCONS_00062078-exon-scaffold_361-1510915933:1669476..1669597TCONS_00062078-exon-scaffold_361-1510915933:1669476..1669597Clytia hemisphaericaexon
TCONS_00062078-exon-scaffold_361-1510915933:1669148..1669211TCONS_00062078-exon-scaffold_361-1510915933:1669148..1669211Clytia hemisphaericaexon
TCONS_00062078-exon-scaffold_361-1510915933:1668837..1668898TCONS_00062078-exon-scaffold_361-1510915933:1668837..1668898Clytia hemisphaericaexon
TCONS_00062078-exon-scaffold_361-1510915933:1668260..1668373TCONS_00062078-exon-scaffold_361-1510915933:1668260..1668373Clytia hemisphaericaexon
TCONS_00062078-exon-scaffold_361-1510915933:1667782..1667910TCONS_00062078-exon-scaffold_361-1510915933:1667782..1667910Clytia hemisphaericaexon
TCONS_00062078-exon-scaffold_361-1510915933:1667404..1667482TCONS_00062078-exon-scaffold_361-1510915933:1667404..1667482Clytia hemisphaericaexon
TCONS_00062078-exon-scaffold_361-1510915933:1666764..1667027TCONS_00062078-exon-scaffold_361-1510915933:1666764..1667027Clytia hemisphaericaexon
TCONS_00062078-exon-scaffold_361-1491911889:1680467..1680504TCONS_00062078-exon-scaffold_361-1491911889:1680467..1680504Clytia hemisphaericaexon
TCONS_00062078-exon-scaffold_361-1491911889:1679253..1679428TCONS_00062078-exon-scaffold_361-1491911889:1679253..1679428Clytia hemisphaericaexon
TCONS_00062078-exon-scaffold_361-1491911889:1673971..1674235TCONS_00062078-exon-scaffold_361-1491911889:1673971..1674235Clytia hemisphaericaexon
TCONS_00062078-exon-scaffold_361-1491911889:1673677..1673747TCONS_00062078-exon-scaffold_361-1491911889:1673677..1673747Clytia hemisphaericaexon
TCONS_00062078-exon-scaffold_361-1491911889:1673192..1673254TCONS_00062078-exon-scaffold_361-1491911889:1673192..1673254Clytia hemisphaericaexon
TCONS_00062078-exon-scaffold_361-1491911889:1672920..1672970TCONS_00062078-exon-scaffold_361-1491911889:1672920..1672970Clytia hemisphaericaexon
TCONS_00062078-exon-scaffold_361-1491911889:1672594..1672786TCONS_00062078-exon-scaffold_361-1491911889:1672594..1672786Clytia hemisphaericaexon
TCONS_00062078-exon-scaffold_361-1491911889:1672314..1672378TCONS_00062078-exon-scaffold_361-1491911889:1672314..1672378Clytia hemisphaericaexon
TCONS_00062078-exon-scaffold_361-1491911889:1672054..1672111TCONS_00062078-exon-scaffold_361-1491911889:1672054..1672111Clytia hemisphaericaexon
TCONS_00062078-exon-scaffold_361-1491911889:1670819..1670872TCONS_00062078-exon-scaffold_361-1491911889:1670819..1670872Clytia hemisphaericaexon
TCONS_00062078-exon-scaffold_361-1491911889:1670583..1670605TCONS_00062078-exon-scaffold_361-1491911889:1670583..1670605Clytia hemisphaericaexon
TCONS_00062078-exon-scaffold_361-1491911889:1670243..1670302TCONS_00062078-exon-scaffold_361-1491911889:1670243..1670302Clytia hemisphaericaexon
TCONS_00062078-exon-scaffold_361-1491911889:1669908..1670019TCONS_00062078-exon-scaffold_361-1491911889:1669908..1670019Clytia hemisphaericaexon
TCONS_00062078-exon-scaffold_361-1491911889:1669476..1669597TCONS_00062078-exon-scaffold_361-1491911889:1669476..1669597Clytia hemisphaericaexon
TCONS_00062078-exon-scaffold_361-1491911889:1669148..1669211TCONS_00062078-exon-scaffold_361-1491911889:1669148..1669211Clytia hemisphaericaexon
TCONS_00062078-exon-scaffold_361-1491911889:1668837..1668898TCONS_00062078-exon-scaffold_361-1491911889:1668837..1668898Clytia hemisphaericaexon
TCONS_00062078-exon-scaffold_361-1491911889:1668260..1668373TCONS_00062078-exon-scaffold_361-1491911889:1668260..1668373Clytia hemisphaericaexon
TCONS_00062078-exon-scaffold_361-1491911889:1667782..1667910TCONS_00062078-exon-scaffold_361-1491911889:1667782..1667910Clytia hemisphaericaexon
TCONS_00062078-exon-scaffold_361-1491911889:1667404..1667482TCONS_00062078-exon-scaffold_361-1491911889:1667404..1667482Clytia hemisphaericaexon
TCONS_00062078-exon-scaffold_361-1491911889:1666764..1667027TCONS_00062078-exon-scaffold_361-1491911889:1666764..1667027Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_361supercontigscaffold_361:1666764..1680504 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.863054	0.570753	0.131908	0.174771	58.0963	38.6793	22.5246	27.0895	27.0872	45.2547	25.3203	30.3863	0.945407	0.0801263	3.13064	2.27925	3.30361	4.07424	0.0605129	0.439664	4.79498	3.89763	0	0	3.8817	4.2026	14.7827	18.0103	0.842987	0.725402
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00062078 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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