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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00062074 ID=TCONS_00062074|Name=TCONS_00062074|organism=Clytia hemisphaerica|type=transcript|length=1115bp
AATGAAGAAGTTCCACCACCTCCAGGAACCATTAAACTGAGTAACGCAGT
TAAAAGAAAGTTGACGTTACGACGACAATCTGACAGAAATGACCGATGAA
TGATTGAATGGATGAATGAATAAATGGATGGCTGGACCATCGATgtaaca
aaatattgaaaacgaaataaaaatagaaaaatcaagaaattatacataat
ttatttataatATTTGACACAGTTTGTGGTTTGAGATGCACATACtctca
aaattaagttttggggcataaaaacaatattttttaagatttttgatttt
atataaaactgtatttttataaattcataTTAACCGATCTAAAATAgcat
gttgaacggtgaaaagaATGTGGCTATTATAATGTGGGTTTCCCGATCTA
AAATCATTTAATTGGCTATTTAGTTAGGTTCAAGCAAACAATCTCATAGA
ACAAAACTAAATTCACCGGGTGTTTTTTATCACAGGTCAGTGCAAATGAC
TGAACTATATAGAACAAAGAAGAATTGCACCTCCCCCAATAATTTTCGTA
CAGTCTCCCACAAATCGAAAGCTGTTGCGCTATAAAGGGTTTGAGTTGAT
AGGGATGGGAGAACTTGAATAGATTTTACATTAAAAAACTTTACTAACAA
TATCTACAATGTATCATGATAACATATATTTACAAATTGTTCGTTTTTTG
CCCACCGGTCGGTTTCTGTCTACCTGGCCGTAAGTCACGATTTAAATTTT
GTTCTTTCAACCCAAGAAATTTATATGGGTTAGGATTATGCAACTAACCT
TTATCCTATCGCAAGGATAAGTTTTGATCAACAAATGACATTGACAATGT
TCAAACTCTAATGTTGAAACACTGGAGATTggtgaatttttaaaaatccg
ttttaaatttgaaaaaaatcaagaccCCTTAGTTCGATGAGATTGAATTT
CTTGGTGATTTGAGTGGAATTCTTTGAGTGCCTTTTGAAGCACCTTGGAT
GTTTGTGTTTGGGCGTCCTTTGTAGCCTTTCGATGAATTTTTCGATTGTT
TGGGAAAGTCGTTCGACTTCTTACGATGTCGTGGTTgactttttgagttc
tttcgGTTCCGTTGT Run BLAST on NCBI transcript from alignment at scaffold_361:1664948..1666593- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00062074 ID=TCONS_00062074|Name=TCONS_00062074|organism=Clytia hemisphaerica|type=transcript|length=1646bp|location=Sequence derived from alignment at scaffold_361:1664948..1666593- (Clytia hemisphaerica)
AATGAAGAAGTTCCACCACCTCCAGGAACCATTAAACTGAGTAACGCAGT
TAAAAGAAAGGTTAGAGAAATAAATTTAAAAACAAATTTGCAGATGATGA
CCAAAGCATTAGTTTTCAGTTCTTTTAGTCATCAAGCTTCACTACTAGTT
TGCAAGGCTAAAAGAAATTAAGTGGACTTGTTACCTTGACTTTTCTCTTA
CCCTCAAAGCCATGTTTCGCTTACCAAGTACTTTGGTTTAACCAGTATCA
TGGTGGCAGGAAGATCAGGGGGCAACTGCTCCCCCTCCAGCGGTCAATTC
TTTTTGGGGTGCCGAAAGACAAGAAGTGCAAAAAGGTGCCTCTGAAAACT
AATTTCGGTGCCCCTTTGCTTTTTTACACCTTTTCAGCCCAAAAGAGAAA
AAATAACCAAGAATCTGCGTGCTCTCAAAGATGTTTTACTATCTAGAGGG
GCGCCGAGATTCCAACTTTCGAAAATTGCCTCCCTAGTTTGGCCTTCTTT
TGGTTGACCCACCACTTTACTAAACTGGTTTAACCATATTTGATAGATCT
TAAAGACTTCAACCTGATGACTTTTTTTCACCATTCTTCAGTTGACGTTA
CGACGACAATCTGACAGAAATGACCGATGAATGATTGAATGGATGAATGA
ATAAATGGATGGCTGGACCATCGATGTAACAAAATATTGAAAACGAAATA
AAAATAGAAAAATCAAGAAATTATACATAATTTATTTATAATATTTGACA
CAGTTTGTGGTTTGAGATGCACATACTCTCAAAATTAAGTTTTGGGGCAT
AAAAACAATATTTTTTAAGATTTTTGATTTTATATAAAACTGTATTTTTA
TAAATTCATATTAACCGATCTAAAATAGCATGTTGAACGGTGAAAAGAAT
GTGGCTATTATAATGTGGGTTTCCCGATCTAAAATCATTTAATTGGCTAT
TTAGTTAGGTTCAAGCAAACAATCTCATAGAACAAAACTAAATTCACCGG
GTGTTTTTTATCACAGGTCAGTGCAAATGACTGAACTATATAGAACAAAG
AAGAATTGCACCTCCCCCAATAATTTTCGTACAGTCTCCCACAAATCGAA
AGCTGTTGCGCTATAAAGGGTTTGAGTTGATAGGGATGGGAGAACTTGAA
TAGATTTTACATTAAAAAACTTTACTAACAATATCTACAATGTATCATGA
TAACATATATTTACAAATTGTTCGTTTTTTGCCCACCGGTCGGTTTCTGT
CTACCTGGCCGTAAGTCACGATTTAAATTTTGTTCTTTCAACCCAAGAAA
TTTATATGGGTTAGGATTATGCAACTAACCTTTATCCTATCGCAAGGATA
AGTTTTGATCAACAAATGACATTGACAATGTTCAAACTCTAATGTTGAAA
CACTGGAGATTGGTGAATTTTTAAAAATCCGTTTTAAATTTGAAAAAAAT
CAAGACCCCTTAGTTCGATGAGATTGAATTTCTTGGTGATTTGAGTGGAA
TTCTTTGAGTGCCTTTTGAAGCACCTTGGATGTTTGTGTTTGGGCGTCCT
TTGTAGCCTTTCGATGAATTTTTCGATTGTTTGGGAAAGTCGTTCGACTT
CTTACGATGTCGTGGTTGACTTTTTGAGTTCTTTCGGTTCCGTTGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00062074-exon-scaffold_361-1575043694:1666534..1666593 | TCONS_00062074-exon-scaffold_361-1575043694:1666534..1666593 | Clytia hemisphaerica | exon |
| TCONS_00062074-exon-scaffold_361-1575043694:1664948..1666002 | TCONS_00062074-exon-scaffold_361-1575043694:1664948..1666002 | Clytia hemisphaerica | exon |
| TCONS_00062074-exon-scaffold_361-1510915933:1666534..1666593 | TCONS_00062074-exon-scaffold_361-1510915933:1666534..1666593 | Clytia hemisphaerica | exon |
| TCONS_00062074-exon-scaffold_361-1510915933:1664948..1666002 | TCONS_00062074-exon-scaffold_361-1510915933:1664948..1666002 | Clytia hemisphaerica | exon |
| TCONS_00062074-exon-scaffold_361-1491911889:1666534..1666593 | TCONS_00062074-exon-scaffold_361-1491911889:1666534..1666593 | Clytia hemisphaerica | exon |
| TCONS_00062074-exon-scaffold_361-1491911889:1664948..1666002 | TCONS_00062074-exon-scaffold_361-1491911889:1664948..1666002 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_361 | supercontig | scaffold_361:1664948..1666593 - |
Blast
The following BLAST results are available for this feature:
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