TCONS_00062038 (transcript) - C. hemisphaerica

Overview
NameTCONS_00062038
Unique NameTCONS_00062038
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2237

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00062038 ID=TCONS_00062038|Name=TCONS_00062038|organism=Clytia hemisphaerica|type=transcript|length=2237bp
TGTGAACgctagataaacgttgaaataactttatgtgccagctgggttat
agTCTAGCTGGGTTACTATTGACAGCCGTCAGCCGTATCTTCTTATCATA
TCAAATAATCGAAAAGACTTGCATAATCGAATGGAACTCACATATCATGC
CAGAGCCAaataacagattttttttcactgaCTGTTTTTTCGATGTACAT
ATTTCATTTATTAGGTAACCCGCCAACAAAACCGCCAATCACCACATCAC
CGCCTAGCTCTTCAATTAAAAATGTGGAGGTTTGTGAGAATATGAACAGA
GTATTGAGTTGCAACGGCAAGAAGATCAACATCTTAAGTGCAACATTTGG
AAATTCTCCCAACAGTAAATGCTCCTCAAACAATAGACAATGTCAAACGA
ATGCTTTGAGCCAAGTCAGACAAAGTTGCCAAGGAGCACCGATGTGTTTT
CTGTCTGCTTCCAGAGATGATTTTGGAGACCCATGCCCAAGCTATGTCAA
AGGAACACTTAATGTCAGATACGAATGTGGTGATTCACAGCCGATCGCCA
CAACACGACCGCCACCACCGCCCACCACCCAACCTTCCAATCGACAAAAA
ATTGAAGTTTGTAAAGATAAAAACAGATATTTAACATGTGGAGCAAATAA
GCTCAGAATCTTGAGCGCGACTTTTGGAAATTCTCCTCAAAACAAATGCT
CCTCAAACAACTATGTATGTCAGACCGATGTTTTGAATCAAATTCGACAA
GTTTGCCAACCAGGGGCTTCATTTTGCTTCTTGATGGCATCGAATCTTGG
TAATTCATGTCCTGGTCATATCAAAGGATCTCTGGTCATCGAATATGAGT
GTTTTGATCCTTCCGCAACAACTCGACGACCCATGGTCACAACAGATCAA
CCCAGGGTCACAACAACACAACCGTTTCTCAGAAAGGTCGTTTGTGAAGA
TCGTGGGGCATTTGTCGGATGTTATATTCCCAATCAAGTCATACAAGTGA
TCAGTGCAACATTCGGACGAACTAATTCTCAATCTTGTCCTTCTTCGTAT
CCACGAAACGATGACGTCAAGTGCTCCACTGATATCGCAAGGTACATGAA
ATACCATTGTGAAGGTCAATCGTTTTGTCAAGCCAATGGAGACGCAGGAT
TGTACGGAGATCCATGCAACAATAAACAaacaagaaaattcttggaGCTC
AAATACAAATGTGTCCCTAGAGGTTCATTCACACCATTGTTTCAACGAAC
AACCATGGTTCTTCCGTCTGTCCCCACCGCTCCGTATGTTGCAACACCAA
CCCCTCCTTCGGCCAATCAAACCGCTAAACCTTACACAGGACAGTGTGGA
AGACCACAAGTTTCAATGTCAAGGGTTGTTCAAGGGAGTGACGCCAAACG
TGGTTCCTGGCCATGGCAAATAGCTATTTACACAAAGAGTGGCGCTTTCA
TTTGCGGAGGATCCATCATTGCACCGCAGTGGATTGTTTCGGCCGCTCAT
TGTTTCAAAGGGGAAGATCCTTCCAAGTTTTACATTGTCGTTGGAGATTA
TGATAGGAAAACTATCGAGGGAagtgaattgaaatattcgatcgATCACG
TGATAAACCATCCCTCGTATGCAAACTTCTCGTCCGTAAAACACGATTAC
GATATCTCCATGGTGAAACTCtctcaaccaatcagatttggACGATTTGT
TCAGCCTGTTTGCTTACCAACAAACCATAATCCAAATCCCTCAAATTGCT
TCGTCACAGGCTGGGGCAAAACAGGTCAACTGAAAGGCTCCCCTGCAAAG
CTCCAACAACTTCAGATGCAAAAAGAATCTCAATATACTTGCAGAAACAA
GTTAAGACAGGCTCCCGGATCACCTGGTGATAAGATCACACGTCGTATGT
TCTGTGCATCAGCCACACGGAATCAAAATGTAGCAGGGATTTGTCAAGGA
GACAGTGGTGGTCCTTTTGTTTGTCAAGAGAACGGAAAATGGGTTTTGAA
TGGTATTGTCAGTTGGGGATCCCCAAGATGTGCCCCAGAAGACATGTACG
GAgtttttgctgatgtcagcgaATTTGTCCCTTGGATCACAAGAACCCAA
CAACTGAATTAAGATTCGAAGCAAtattgacttttttcttttatacctAG
ATGAAATGtcaaatattttattataaTATTCTCTGCGaaatcatattttt
aaaaatctgaagtTCAAAACTCAAAACTCAATAAATA
Run BLAST on NCBI

transcript from alignment at scaffold_361:1103764..1114815-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00062038 ID=TCONS_00062038|Name=TCONS_00062038|organism=Clytia hemisphaerica|type=transcript|length=11052bp|location=Sequence derived from alignment at scaffold_361:1103764..1114815- (Clytia hemisphaerica)
TGTGAACGCTAGATAAACGTTGAAATAACTTTATGTGCCAGCTGGGTTAT
AGTCTAGCTGGGTTACTATTGACAGCCGTCAGCCGTATCTTCTTATCATA
TCAAATAATCGAAAAGACTTGCATAATCGAATGGAACTCACATATCATGC
CAGAGCCAAATAACAGATTTTTTTTCACTGACTGTTTTTTCGATGTACAT
ATTTCATTTATTAGGTAACCCGCCAACAAAACCGCCAATCACCACATCAC
CGCCTAGCTCTTCAATTAAAAATGGTATGTTAAATTTTTTGGTGATTATC
CGTTCGTTTGTTCCTTTATGTTTGTGCGAAAAAAACCGGTGAAACTCCGC
TCCTAAAGAAATACTGGAAAAATTGCCTTTGATTTCATCCCCATTTGAAA
TTCAATGGAAAAGTATAAAGGCCTTTTCATAAATTGTTTTGAGTGCAATG
ACAATCCCCACTGATTATTTTTGAGGTAGGAATGTTAGATCCCCATTAGG
ATTTCGATGAAAATATTCATCTTCATTATGGGAAAGAGTTCAACTGGGGT
GAATGGCAATCTTCAGTGAAATTTTCTTCCACAATTCAATGTCTTTTAAA
TCTTCCTTATTTTTCTTTAGTGGAGGTTTGTGAGAATATGAACAGAGTAT
TGAGTTGCAACGGCAAGAAGATCAACATCTTAAGTGCAACATTTGGAAAT
TCTCCCAACAGTAAATGCTCCTCAAACAATAGACAATGTCAAACGAATGC
TTTGAGCCAAGTCAGACAAAGTTGCCAAGGAGCACCGATGTGTTTTCTGT
CTGCTTCCAGAGATGATTTTGGAGACCCATGCCCAAGCTATGTCAAAGGA
ACACTTAATGTCAGATACGAATGTGGTGGTAATGTTATGATTTACCATAT
CCTTGATTCATTTTATTTCGCCTGTTTTACTTTTGAGAATAGTTAGGAAG
GGAGTTGATGTTGAAAATGATTTATTAACGGTGGAACCCATAATTTTCTA
AAGTAAGTCATGTCCGTGATACAAAAAAAAACGTAGATAGTATGTAGTCA
AGTGTGAGACATGACAAACGNAAAGTAAGTCATGTCCGTGATACAGAAAA
AATAACGTAGATAGTATGTAGTCATGTGTGAGAAATGACAAACAAAATCC
CTTTTCTTAGATTCACAGCCGATCGCCACAACACGACCGCCACCACCGCC
CACCACCCAACCTTCCAATCGACAAAAAAGTAAGTTCTAGTTAGTTCTCT
CGTCAAGTCAACTTTTATCATAAGGCAAGATGGAATTAAAGGTTTTGTTT
TTAAATAAGAGTGATATCGTTTGCTTACTCATCAATTTTAATTTTAGAAG
CTTTTTCATATTGAATTGACACGGATGTGGAGCAAGATTGGTCAGAAAGA
GGAAAAGAAAAGCATTTTTTGTTTATATCAGCATAATATAACAATTGGGA
GATACTGTCCTAATACGAAATATGTGTCTGATATGAAACGGGTGGTCATT
TCTTTCTAATTTTTTTAAAGAAAATCGCTAGTTCAAACTTTAAAGGCTGA
TAGAAAGGTGCCCAGTGGTAAAACTTCAAATTACAACTCACTCGTTGACC
AAAAATGGTCAAAAAACGGTCAAAATCTTAAATAAATGGAATTTTGTCAA
TTTTTTGCATTTTTTTTGACTTTTTAGCTTAAAATCTTGCTGAAAAAACT
CTGTGTTGATTGGTTTTTTTTGCTTGACCATGAAGCCCAATCCAATTCCT
ACGCGTTAGACCAAATATGACGGTTTCTAACTCAAGCCGGGCATTACAGG
AGGGCTTCGCCATCCTTCATAGCCATAGTCTGATATATACGACATTGGCA
CTTAAAGGGTTAACATTCGAAGGCCTATTTTTACAAAAGCGCAATACCAG
CATAAATATTGGGGATTGTTTTTTGCTTGTTTTAATAAGTTCTCATTCAA
CCAAACTATTTTTATTCAGTTGTCCAGACCACGAGACGAAAAAGGACGTG
ATTGGCGCGATCGTATTTTCAATAAAATATTTCTCTTATTTTTCTACAGT
TGAAGTTTGTAAAGATAAAAACAGATATTTAACATGTGGAGCAAATAAGC
TCAGAATCTTGAGCGCGACTTTTGGAAATTCTCCTCAAAACAAATGCTCC
TCAAACAACTATGTATGTCAGACCGATGTTTTGAATCAAATTCGACAAGT
TTGCCAACCAGGGGCTTCATTTTGCTTCTTGATGGCATCGAATCTTGGTA
ATTCATGTCCTGGTCATATCAAAGGATCTCTGGTCATCGAATATGAGTGT
TTTGGTGAGTCTTGATTGAATTTCAAATCGTTCGTTTTAATAACTAGCAT
TCTTAAAAACCAAACAACTTTCTCAAAGTTCCTTGGTTTAAAATCCATCC
ATCCATCCACCATATCAAACAGGAAGTTGGGTTCTTATTGGAACAATAAG
ACTTCGATATCGAAAAAAAACAAAGTAAATCTATATGATTTATAACGAAA
CAAAAGCAGTTCCATGTCTTTGGTTTTTTGTTGAAAAATATACGATACGA
TAATACAAATATACAATAACTTATTCATCCCAGACCCTTCAGCAACGACT
CGAAATCTCAAAAATACAAAGTAAATCTATAATCCATAACATGGAGAAAT
TAGATGGCTAATGAATGAAAAAAACATGCTTCTAAACGAAACAAAAACAG
TCCCATTTCTTTAATATCTTGCTGAGAAATCACTATATGATACCTTTATT
CCAGATCCTTCCGCAACAACTCGACGACCCATGGTCACAACAGATCAACC
CAGGGTCACAACAACACAACCGTTTCTCAGAAGTAAGATATTCAAATCCT
TTCACCTGATCTTTCCTTTCTCCTGTTTTATGCGAAAAAAAGTACAATTT
TTATTGAGATGGTCAAACCTTTGTGACTAGATGAAAATACCATCACTTTT
TTTGTGTTCAAGAATTTTAAATGAAAGGGAACTCCTATGTTTAATTATTC
AATTTTATGTTTACAGATTTTTGAAATATTGAAGTCTTGAAAAACTTTGC
TGGACCCCTCTAAGCCGTTTTCGAACCAAATTTTTCTTGAGTTGGAATTT
CATTTCAATTCGTGATCAACAATTGGCCTAAGGCAAAAAGATAAATATTC
TTCCATACAATATGAATATGAATATTTCATGCTATCTCCTTAGAAGACCT
TGAAAATTTCGTATAATAGGATACTACAAAAATTGTAAATTTTTTACTAT
TGACTAAAAAGTCTTAAAATGTTCTTAACTTGTTCATAATATTTTGACTA
TCGAAACCTTATGCTCTTATATAGTCTGTTCTTATAAAAACATGTATCGC
TTTTCACTTTTCTAGAGGTCGTTTGTGAAGATCGTGGGGCATTTGTCGGA
TGTTATATTCCCAATCAAGTCATACAAGTGATCAGTGCAACATTCGGACG
AACTAATTCTCAATCTTGTCCTTCTTCGTATCCACGAAACGATGACGTCA
AGTGCTCCACTGATATCGCAAGGTGGGTTATGATAGAAAATGTAAAGGAA
TGAATAGAAAGTTTTCTTATACAAACACTGCCTTAATAGTATAAGCTTTT
TTTCCGTCGGTGTTTCATTGTTTGGAAGAAAATAGTGATTGTATTTCGGT
GTCAAATAAGTAACACAGTCACAAAATGAATAGACTTTAGCAAATTTTAC
TCTTGATGTTGATGGTGCTGATCGAAGGAAAATACGTTGGTATTTCTGAT
TTTCACGACACGGTTAAGTGGTTTCGGGCGTCGAGTCATTCTGTCTTAAT
TTTTCCACTTTTCCCCAGGTACATGAAATACCATTGTGAAGGTCAATCGT
TTTGTCAAGCCAATGGAGACGCAGGATTGTACGGAGATCCATGCAACAAT
AAACAAACAAGAAAATTCTTGGAGCTCAAATACAAATGTGTCCCTAGAGG
TTTGTTATATGTCATTGGCGTCGACCTAACATTTCAAAAATTCACTAGAA
ATGAGTAACAAGTGTCGCCCTAACGTATCAAAAATTCACTAAAAATGATA
AAATTGTCGCCCTAAGGGGCCGTCCACATCGTACGTACGTACTAAAATGT
CGAAAATCGAGTACCCCCTCCCCCCTGTACGCAAGCGTACGCAAATGACT
ATACCCCTGGTAAGTACGTACTTTTTCATTAACCACCCCCTCCCCTCAGT
TGAAGAACATTTCTAATTCAAATCGTTCGTTCCTTTATTTCATACATGAA
ACTTGATGTTTATTAAGAAACTTTTTCTTCTCTTTGATGCGTAAAACAAG
CGTAAAAATCGACAAAAAACAAGCAAAAACTAGACTGGAGTCGTTTATAA
TGCGTGTAATACTAATAATACCAATACTACTAATAATAATACGGGATTTA
GTTTGTATAAATGACTGGAAGAATCCGGTGTNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
AAACTTGCGTAGCGAGAAAACAATTTATCAAGCAACAACAAACTCTCAAA
ACGAAATCAACTCAAATGAAAAACTTTCAATACACAAATCCACACATATT
CTTTTCTCAAGAATTTTTTTGAGCAGGAAAAAATTATAATTGCAATATTG
ACACTTTTCTTTTGTTTGGAGTTAGTCCACAAAGGTTTCTAGACGACTAA
AATTGTTCCATTCATTACTTTTTGCTTTATTTCTACTATGTATAAATTAG
TCGTCTAGCTTGCTAGACTAAGCAAAAACGGGCTATGAAAAACTTTTTTC
TGCGTACGTACATTTTCCTTTGACCCCTACCCTCCCCCTGTACGCAAGCA
TACGCTTTTGAGAAGACCCCCCCCCCTTAGTAAGTATGTACTATGTGGAC
GGCCCCTAACGTATCAAAAATTCACTAAAAATGGATAATAAGTGTCGCCC
TAACGTTTCAATAATTCACTAAAAATGGATGATAAGTGTCGCTCTAACGT
ATCAAAAATTCACTAAAAATGGATAATAAGTGTCGCCCTAACGTTTCAAT
AATTCACTAAAAATGGATGATAAGTGTCGCTCTAACGTATCAAAAATTCA
CTAAAAATGGATAATAAGTGTCGCCCTAACGTTTCAATAATTCACTAAAA
ATGGATGATAAGTGTCGCTCTAACGTATCAAAAATTCACTAAAAATGGAT
AATAAGTGTCGCCCTAACGTTTCAATAATTCACTAAAAATGGATGATAAG
TGTCGCTCTAACGTATCAAAAATTCACTAAAAATGGATAATAAGTGTCGC
CCTAACGTTTCAATAATTCACTAAAAATGGATGATAAGTGTCGCCCTAAC
GTATCAAAAATTCACTAAAAATGGATAATAAGTGTCGCCCTAACGTTTCA
ATAATTCACTAAAAATGGATGATAAGTGTCGCTCTAACGTATCAAAAATT
CACTAAAAATGGATAATAAGTGTCGCCCTAACGTTTCAATAATTCACTAA
AAATGGATGATAAGTGTCGCCCTAACGTATCAAAAATTCACTAAAAATGG
ATAAAAAGTGTCGGCCTAACGTATCAAAAATTTACTAAAAATGGATAATA
AGTGTCGCCCTAACGTTTCAAAAAGTCTCTAGAAATGGATGAAAAGTGTC
GGCCTAACGTTTCAAAAATTCACTGAAAATAGATAAAAAATGTTGCTCTA
ACGTTTCAAAAATTCACTAAAAATAGATATAAAGTGTCGCCCTAATGTAT
CAAAAATTCACTAAAAATGGATAAAAAGTGTCGCTCTAACGTTTCAAAAA
TTCACTAAAAATGGATAAAAAGTGTCGCCCTAACGTTTCAAAAATTCACT
AAAAATGGATAAAAAGTGTCGCCCTAACGTTTCAAAAATTCACTAAAAAT
GGATAAAAAGTGTCGCCCTAACGTATGAAAAATTTACTAAAAATGGATAA
AAAGTGTCGCCCTAACGTATCAAAAATTTACTAAAAATGGATAAAAATTG
TCGCCCTAACGTTTTGAAAATCCACTAAAAGTGGATGAAAAGTGTCGCCC
TAACGTTTTAAAAATTCAATATAAATGGATAATAAGTGTCGCCCTAACGT
TTCGAAAATCCATTAAAAATGGATAAAAAGTGTCGCCCTAACGTATGAAA
AATTTACTAAAAATGGATAAAAATTGTCGCCCTAACGTTTTGAAAATCCA
CTAAAAGTGGATGAAAATTATCGCCCTAACGTTTTGAAAATTCACTAAAA
ATGGATGAAAAGTGTCGCCCTAATGTATCAAAAATTCACTAAAAATGGAT
AAAAAGTGTTGCTCTAACGTTTCAAAAATTCACTAAAAATGGATAAAAAG
TGTCGCCCTAACGTTTCAAAAATTCACTAAAAATGGATAAAAAGTGTTGC
TCTAACGTTTCAAAAATTCACTAAAAATGGATAAAAAGTGTCGCCCTAAC
GTTTCAAAAATTCACTAAAAATGGATAAAAAGTGTCGCCCTAACGTTTCA
AAAATTCACTAAAAATGGATAATAAGTGTCACCCTAACGTTTCAAAAATT
CACTAAAAGTGGATAATAAGTGTCGCCTTAACGTTTCAAAAATTCACTAA
AAGTGGATGAAAATTATCGCCCTAACGTTTTAAAAATTCACTAAAAATGG
ATGAAAAGTGTCGCCCTAATGTATCAAAAATTCACTAAAAATGGATAATA
AGTGTCACCCTAACGTTTCAAAAATTCACTAAAAGTGGATGAAAATTATC
GCCCTAACGTTTTGAAAATTCACTAAAAATGGATGAAAAGTGTCGCCCTA
ATGTATCAAAAATTTACTAAAAATGGATAAAAATTGTCGCCCTAATGTTT
TGAAAATCCACTAAAAGTGGATGAAAATTATCGCCCTAACGTTTTGAAAA
TTCACTAAAAATGGATGAAAAGTGTCGCCCTAATGTATCAAAAATTCACT
AAAAATGGATAATAAGCGATACCCTACATAATACTTAATTCACTAAAAGT
GGATGAAAATTATCGCCCTAACGTTTTGAAAATTCACTAAAAATGGATGA
AAAGTGTCGCCCTAATGTATCAAAAATTCACTAAAAATGGATAATAAGCG
ATACCCTACATAATACTTAATTCACTAAAAGTGGATGAAAATTATCGCCC
TAACGTTTTGAAAATTCACTAAAAATGGATGAAAAGTGTCGCCCTAATGT
ATCAAAAATTCACTAAAAATGGATAATAAGCGATACCCTACATAATACTT
AATTCACTAAAAGTGGATGAAAATTATCGCCCTAACGTTTTGAAAATTCA
CTAAAAATGGATGAAAAGTGTCGCCCTAATGTATCAAAAATTCACTAAAA
ATGGATAATAAGCGATACCCTACATAATACTTAATTCACTAAAAGTGGAT
GAAAATTATCGCCCTAACGTTTTGAAAATTCACTAAAAATGGATGAAAAG
TGTCGCCCTAATGTATCAAAAATTCACTAAAAATGGATAATAAGCGATAC
CCTACATAATACTTAATTCACTAAAAGTGGATGAAAATTATCGCCCTAAC
GTTTTGAAAATTCACTAAAAATGGATGAAAAGTGTCGCCCTAATGTATCA
AAAATTCACTAAAAATGGATAATAAGCGATACCCTACATAATACTTAATT
CACTAAAAGTGGATGAAAATTATCGCCCTAACGTTTTGAAAATTCACTAA
AAATGGATGAAAAGTGTCGCCCTAATGTATCAAAAATTCACTAAAAATGG
ATAATAAGCGATACCCTACATAATACTTAATTCACTAAAAGTGGATGAAA
ATTATCGCCCTAACGTTTTGAAAATTCACTAAAAATGGATGAAAAGTGTC
GCCCTAATGTATCAAAAATTCACTAAAAATGGATAATAAGCGATACCCTA
CATAATACTTAATTCACTAAAAGTGGATGAAAATTATCGCCCTAACGTTT
TGAAAATTCACTAAAAATGGATGAAAAGTGTCGCCCTAATGTATCAAAAA
TTCACTAAAAATGGATAATAAGCGATACCCTACATAATACTTAATTCACT
AAAAGTGGATGAAAATTATCGCCCTAACGTTTTGAAAATTCACTAAAAAT
GGATGAAAAGTGTCGCCCTAATGTATCAAAAATTCACTAAAAATGGATAA
TAAGCGATACCCTACATAATACTTAATTCACTAAAAGTGGATGAAAATTA
TCGCCCTAACGTTTTGAAAATTCACTAAAAATGGATGAAAAGTGTCGCCC
TAATGTATCAAAAATTCACTAAAAATGGATAATAAGCGATACCCTACATA
ATACTTAATTCACTAAAAGTGGATGAAAATTATCGCCCTAACGTTTTGAA
AATTCACTAAAAATGGATGAAAAGTGTCGCCCTAATGTATCAAAAATTCA
CTAAAAATGGATAAAAAGTGTTGCTCTAACGTTTCAAAAATTCACTAAAA
ATGGATAAAAAGTGTCGCCCTAACGTATCAAAAATTTACTAAAAATGGAT
AAAAATTATCGCCCTAACGTTTCAAAAATTAACTAAAAATGGATAAAAAG
TGTCGCCATAACGTTTGGAATATTCACTAAAAATACACAATAAAAGGATA
CCATAAATGTAATATAATGTATGTAATTGAAAATCTGTGCTACCTATTTT
TATGCTTCGTTTTTTAGGTTCATTCACACCATTGTTTCAACGAACAACCA
TGGTTCTTCCGTCTGTCCCCACCGCTCCGTATGTTGCAACACCAACCCCT
CCTTCGGCCAATCAAACCGCTAAACCTTACACAGGTGAGTTGATTCTTAT
CACGACTCTCATTAAAGAAAATGTATTGTATTGGACAAGGTTTAAAGCTT
TTATCACATCAGAGTTCAAATGATTTTATAAAATTACCATTTGGCATTAC
GTATTTTTCTATATATTCAGCAAACAATTTCTTGTCTGAAGAGCTTTTAA
ATAATTGATTTTCTGGGAGGTTTCAAATAAAATTCGGGAATATAAATTAT
TTTTCTACAGGACAGTGTGGAAGACCACAAGTTTCAATGTCAAGGGTTGT
TCAAGGGAGTGACGCCAAACGTGGTTCCTGGCCATGGCAAATAGCTATTT
ACACAAAGAGTGGCGCTTTCATTTGCGGAGGATCCATCATTGCACCGCAG
TGGATTGTTTCGGCCGCTCATTGTTTCAAAGGGGAAGATCCTTCCAAGTT
TTACATTGTCGTTGGAGATTATGATAGGTATTCTTTTTGATTGAAAATTG
ACTTTTTTCGAAATTACTTCTTAGAATTTGGGATTTAATCTGATTCAATT
CCTCTGTTTCGCATTTTTTTTGTGAATATAAACATGCTATCTATCAATCG
TTTTATTTTTGTTCCCGTGATGTTTAAACTTTTTTTGAAACCCTTTTGAA
AGTACCCTTCAACCCTTCAATGTGTCTAAGAACAGGAATAAAATTTTTTT
TAAGAAGATACTAATACGTCCATAGTGACGATTGTTGTTTTTTTAGATGT
GAGTAACCAAGCTATGGTGTTCGCTGAAGTATTACTTCGTGAATGTTTCG
TTTCATCATTGTAGGAAAACTATCGAGGGAAGTGAATTGAAATATTCGAT
CGATCACGTGATAAACCATCCCTCGTATGCAAACTTCTCGTCCGTAAAAC
ACGATTACGATATCTCCATGGTGAAACTCTCTCAACCAATCAGATTTGGA
CGATTTGTTCAGCCTGTTTGCTTACCAACAAACCATAATCCAAATCCCTC
AAATTGCTTCGTCACAGGTCTATTACATTTTCTGATTCTTGTTTGTGTCT
TATGTTCTCAAAATCATCAAAATCACTTCAATAGACTTTGAAATGATACA
GTGATTAATAATCTTACTATACTAAATGAGTTTATGAAAAATGTGTGTAA
CGCAAGATGGTAGCTGAGCTGTTATTCTCAAATTTTGCCAGAGAGTTGAT
TCATTTTAAATGGGAGAATTTTCTAAGGTAAAGCACCAAATCCACTTTAA
TAGGTTGTGAATCAATTTAGTGATTGAATAAACTCTAAACTTATTTAACT
TGAGAGCCCGCGACTCAAGGTTCTTTTATTCATTGTTAGGCTGGGGCAAA
ACAGGTCAACTGAAAGGCTCCCCTGCAAAGCTCCAACAACTTCAGATGCA
AAAAGAATCTCAATATACTTGCAGAAACAAGTTAAGACAGGCTCCCGGAT
CACCTGGTGATAAGATCACACGTCGTATGTTCTGTGCATCAGCCACACGG
AATCAAAATGTAGCAGGGATTTGTCAAGGAGACAGTGGTGGTCCTTTTGT
TTGTCAAGAGAACGGAAAATGGGTTTTGAATGGTATTGTCAGTTGGGGAT
CCCCAAGGTACGTTGGAAAGTAAATGGTTCTACCAACCTCGTTCCCTGCG
TATTATCAGCTTTTTTATGCTTACTGGTAGCGCTAGATAATTCTCTGGCT
TCAATCAGTCCAGTAACGTCAATAAAGCCTGGTATACGAGGTTGTGGTTC
TACTTGTTTTCTGAATAACGACACTCGGAGAAAATCCAAGATAAATTTTC
ATTTGATCAGCTTCGTTCTCTTACATCTCCAATACACAGCAGTTATTTTT
GATGCCTTTTTAGTTTTCAACCTGTCAATGAATTTCATGTTTTCCGATGT
TTATTTCTTTGGTTTGACGGAAATCAGAATTTAGCAAATTGTTCTGACAT
TAAATATAAACCGCAGTATTAATTTTTTTAATGTCATAAAATGAATTATA
GAAATAAATCTTTTGGTTCTAGATATTTTCTCCTCTCTTTAGATGTGCCC
CAGAAGACATGTACGGAGTTTTTGCTGATGTCAGCGAATTTGTCCCTTGG
ATCACAAGAACCCAACAACTGAATTAAGATTCGAAGCAATATTGACTTTT
TTCTTTTATACCTAGATGAAATGTCAAATATTTTATTATAATATTCTCTG
CGAAATCATATTTTTAAAAATCTGAAGTTCAAAACTCAAAACTCAATAAA
TA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_038880XLOC_038880Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00062038-exon-scaffold_361-1575043694:1114542..1114815TCONS_00062038-exon-scaffold_361-1575043694:1114542..1114815Clytia hemisphaericaexon
TCONS_00062038-exon-scaffold_361-1575043694:1113938..1114195TCONS_00062038-exon-scaffold_361-1575043694:1113938..1114195Clytia hemisphaericaexon
TCONS_00062038-exon-scaffold_361-1575043694:1113587..1113655TCONS_00062038-exon-scaffold_361-1575043694:1113587..1113655Clytia hemisphaericaexon
TCONS_00062038-exon-scaffold_361-1575043694:1112512..1112766TCONS_00062038-exon-scaffold_361-1575043694:1112512..1112766Clytia hemisphaericaexon
TCONS_00062038-exon-scaffold_361-1575043694:1111984..1112061TCONS_00062038-exon-scaffold_361-1575043694:1111984..1112061Clytia hemisphaericaexon
TCONS_00062038-exon-scaffold_361-1575043694:1111294..1111450TCONS_00062038-exon-scaffold_361-1575043694:1111294..1111450Clytia hemisphaericaexon
TCONS_00062038-exon-scaffold_361-1575043694:1110867..1110997TCONS_00062038-exon-scaffold_361-1575043694:1110867..1110997Clytia hemisphaericaexon
TCONS_00062038-exon-scaffold_361-1575043694:1105982..1106098TCONS_00062038-exon-scaffold_361-1575043694:1105982..1106098Clytia hemisphaericaexon
TCONS_00062038-exon-scaffold_361-1575043694:1105539..1105755TCONS_00062038-exon-scaffold_361-1575043694:1105539..1105755Clytia hemisphaericaexon
TCONS_00062038-exon-scaffold_361-1575043694:1104999..1105201TCONS_00062038-exon-scaffold_361-1575043694:1104999..1105201Clytia hemisphaericaexon
TCONS_00062038-exon-scaffold_361-1575043694:1104409..1104676TCONS_00062038-exon-scaffold_361-1575043694:1104409..1104676Clytia hemisphaericaexon
TCONS_00062038-exon-scaffold_361-1575043694:1103764..1103973TCONS_00062038-exon-scaffold_361-1575043694:1103764..1103973Clytia hemisphaericaexon
TCONS_00062038-exon-scaffold_361-1510915933:1114542..1114815TCONS_00062038-exon-scaffold_361-1510915933:1114542..1114815Clytia hemisphaericaexon
TCONS_00062038-exon-scaffold_361-1510915933:1113938..1114195TCONS_00062038-exon-scaffold_361-1510915933:1113938..1114195Clytia hemisphaericaexon
TCONS_00062038-exon-scaffold_361-1510915933:1113587..1113655TCONS_00062038-exon-scaffold_361-1510915933:1113587..1113655Clytia hemisphaericaexon
TCONS_00062038-exon-scaffold_361-1510915933:1112512..1112766TCONS_00062038-exon-scaffold_361-1510915933:1112512..1112766Clytia hemisphaericaexon
TCONS_00062038-exon-scaffold_361-1510915933:1111984..1112061TCONS_00062038-exon-scaffold_361-1510915933:1111984..1112061Clytia hemisphaericaexon
TCONS_00062038-exon-scaffold_361-1510915933:1111294..1111450TCONS_00062038-exon-scaffold_361-1510915933:1111294..1111450Clytia hemisphaericaexon
TCONS_00062038-exon-scaffold_361-1510915933:1110867..1110997TCONS_00062038-exon-scaffold_361-1510915933:1110867..1110997Clytia hemisphaericaexon
TCONS_00062038-exon-scaffold_361-1510915933:1105982..1106098TCONS_00062038-exon-scaffold_361-1510915933:1105982..1106098Clytia hemisphaericaexon
TCONS_00062038-exon-scaffold_361-1510915933:1105539..1105755TCONS_00062038-exon-scaffold_361-1510915933:1105539..1105755Clytia hemisphaericaexon
TCONS_00062038-exon-scaffold_361-1510915933:1104999..1105201TCONS_00062038-exon-scaffold_361-1510915933:1104999..1105201Clytia hemisphaericaexon
TCONS_00062038-exon-scaffold_361-1510915933:1104409..1104676TCONS_00062038-exon-scaffold_361-1510915933:1104409..1104676Clytia hemisphaericaexon
TCONS_00062038-exon-scaffold_361-1510915933:1103764..1103973TCONS_00062038-exon-scaffold_361-1510915933:1103764..1103973Clytia hemisphaericaexon
TCONS_00062038-exon-scaffold_361-1491911889:1114542..1114815TCONS_00062038-exon-scaffold_361-1491911889:1114542..1114815Clytia hemisphaericaexon
TCONS_00062038-exon-scaffold_361-1491911889:1113938..1114195TCONS_00062038-exon-scaffold_361-1491911889:1113938..1114195Clytia hemisphaericaexon
TCONS_00062038-exon-scaffold_361-1491911889:1113587..1113655TCONS_00062038-exon-scaffold_361-1491911889:1113587..1113655Clytia hemisphaericaexon
TCONS_00062038-exon-scaffold_361-1491911889:1112512..1112766TCONS_00062038-exon-scaffold_361-1491911889:1112512..1112766Clytia hemisphaericaexon
TCONS_00062038-exon-scaffold_361-1491911889:1111984..1112061TCONS_00062038-exon-scaffold_361-1491911889:1111984..1112061Clytia hemisphaericaexon
TCONS_00062038-exon-scaffold_361-1491911889:1111294..1111450TCONS_00062038-exon-scaffold_361-1491911889:1111294..1111450Clytia hemisphaericaexon
TCONS_00062038-exon-scaffold_361-1491911889:1110867..1110997TCONS_00062038-exon-scaffold_361-1491911889:1110867..1110997Clytia hemisphaericaexon
TCONS_00062038-exon-scaffold_361-1491911889:1105982..1106098TCONS_00062038-exon-scaffold_361-1491911889:1105982..1106098Clytia hemisphaericaexon
TCONS_00062038-exon-scaffold_361-1491911889:1105539..1105755TCONS_00062038-exon-scaffold_361-1491911889:1105539..1105755Clytia hemisphaericaexon
TCONS_00062038-exon-scaffold_361-1491911889:1104999..1105201TCONS_00062038-exon-scaffold_361-1491911889:1104999..1105201Clytia hemisphaericaexon
TCONS_00062038-exon-scaffold_361-1491911889:1104409..1104676TCONS_00062038-exon-scaffold_361-1491911889:1104409..1104676Clytia hemisphaericaexon
TCONS_00062038-exon-scaffold_361-1491911889:1103764..1103973TCONS_00062038-exon-scaffold_361-1491911889:1103764..1103973Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_361supercontigscaffold_361:1103764..1114815 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.138285	0.306537	0.128482	0	0	0	0	0	0	0	0	39.1925	40.5859	10.4448	24.2421	1.14443	0.587615	116.464	138.762	2.35042	5.98862	6.32385	8.16564	44.4349	37.2532	25.2477	48.3732	0.732986	0.75543
Blast
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BLAST of TCONS_00062038 vs. Swiss-Prot (Human)
Match: CTRB1 (Chymotrypsinogen B OS=Homo sapiens GN=CTRB1 PE=2 SV=2)

HSP 1 Score: 172.555 bits (436), Expect = 2.812e-48
Identity = 101/264 (38.26%), Postives = 145/264 (54.92%), Query Frame = 1 
Query: 1345 CGRPQV-----SMSRVVQGSDAKRGSWPWQIAIYTKSGAFICGGSIIAPQWIVSAAHC-FKGEDPSKFYIVVGDYDRKTIEGSELKYSIDHVINHPSYANFSSVKHDYDISMVKLSQPIRFGRFVQPVCLPTNHNPNPSN--CFVTGWGKTG-QLKGSPAKLQQLQMQKESQYTCRNKLRQAPGSPGDKITRRMFCASATRNQNVAGICQGDSGGPFVCQENGKWVLNGIVSWGSPRCAPEDMYGVFADVSEFVPWITRTQQLN 2109
            CG P +      +SR+V G DA  GSWPWQ+++  K+G   CGGS+I+  W+V+AAHC  +  D     +V G++D+ + E +     I  V  +P    FS +  + DI+++KL+ P RF + V  VCLP+  +  P+   C  TGWGKT      +P KLQQ  +   S   C+        S G +IT  M CA A+   +    C GDSGGP VCQ++G W L GIVSWGS  C+     GV+A V++ +PW+ +    N
Sbjct:   19 CGVPAIHPVLSGLSRIVNGEDAVPGSWPWQVSLQDKTGFHFCGGSLISEDWVVTAAHCGVRTSD----VVVAGEFDQGSDEENIQVLKIAKVFKNP---KFSILTVNNDITLLKLATPARFSQTVSAVCLPSADDDFPAGTLCATTGWGKTKYNANKTPDKLQQAALPLLSNAECKK-------SWGRRITDVMICAGASGVSS----CMGDSGGPLVCQKDGAWTLVGIVSWGSDTCSTSS-PGVYARVTKLIPWVQKILAAN 263
The following BLAST results are available for this feature:
BLAST of TCONS_00062038 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CTRB12.812e-4838.26Chymotrypsinogen B OS=Homo sapiens GN=CTRB1 PE=2 S... [more]
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