TCONS_00062025 (transcript) - C. hemisphaerica

Overview
NameTCONS_00062025
Unique NameTCONS_00062025
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length742

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00062025 ID=TCONS_00062025|Name=TCONS_00062025|organism=Clytia hemisphaerica|type=transcript|length=742bp
ctGACTCGAACCAACAACAACTTGTTCAATCTAACCAGCATTGGTTTGTT
ACAGTCACAGAATGGCTGAATCAATACCAAACATGGCCCAAAAGATAGAA
ACACGGGAAGATGAGGAGCAGGGAAAGAAGTTTCATGAAACAGTTGATTT
GCTTCTTGCTGCTGGATATTTTCGAGCAAGAATTAAAGGATTATCTCCCT
TCGATAagGTAGTTGGTGGTATGACATGGTGTATTACCACTTGTGATTTC
GATGTTGATGTCGACcttttatttcaagaaaactcTACAATCGGTCAGAA
AATTGCATTGACTGAGAAGATTGTTGCAGTTTTACCAAAGATGAAATGTC
CACATCGCATAGAACCTCATCAAATTCAAGGGCTCGATTTCATTCATATA
TTTCCTGTCATCCAGTGGCTTGTAAAGAGGGCAATCGAAGTTCGAGAAGA
ATTGGGTGATAAGATTCGTGAATACTCAATTAATCAATTTCACAAATCAT
ATTCCATGCCCAAAGATGAAGAAGCAAAGGAAAAAGAATTCCTATCCCTT
GATGCCGTCAAAACATTCAagGAATCATACAAGCCAAAACGAATGTTCAA
GAAGCCCTCCAAGTTTGCCAAAGCTGATGAAGACACACAAGTTCAAAGCA
CGCTCTTAGAATACGGTCAACGCTTTGGTTTCAGTGGGAGTAAAGCAAAC
AAGGAAGAAACAGAAGCCAAACAAAAAGCCATTGCTGCAGGT
Run BLAST on NCBI

transcript from alignment at scaffold_361:885876..895990-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00062025 ID=TCONS_00062025|Name=TCONS_00062025|organism=Clytia hemisphaerica|type=transcript|length=10115bp|location=Sequence derived from alignment at scaffold_361:885876..895990- (Clytia hemisphaerica)
CTGACTCGAACCAACAACAACTTGTTCAATCTAACCAGCATTGGTTTGTT
ACAGTCACAGGTGTGCATTTTCTTCTATCTTTCACACAATGGTTTGCTTA
TTATCTAATACAGGAAAGTTTTTAAGAAGGGAGGAAGGCTGGATTTTTAA
AAGTTTGGATTTTAGGTCCCGTGGTGGCGCTATATGATCGATTCTGTGTG
TGGCGTCATTTTCACCTACAATCAGCCATTTTTTCTAAAAAATGGTAGAA
AGAATATGTAAAGGATGATTTAGTAACACCTTGATAGCTCAAAATCTTCA
AATGTTTCCCGTTTAGACCTGTCTGTGTGTGCTGACGGTATAGTTTTTTT
TGTTTTGTCGGTGAATTCTTTTTGTCCTAGTGTCCTTTGCGCTTTTTAAT
GAAATTAACATTTTCAAAAACTTTTAAAAATTGCCTAAAATTTGAGCCAT
AGATGAAAAAATTTGAGCCAAGCCAACCTTGAAAACTAATTTGAAGATCA
AACTTCCCAAGAAAAAGATCTACGAGGGAGGCGGAACCCATCTAGATCTG
TGCACCACTCTGGATAGGCTGTTTCCCGGAATTTTTGCCGGACCTCAAAT
AATGACCCATTTACATATGCGGAATTATTTTTACTTTAGCGTAGAAACCA
GGCCTTAAAAATCAAAGCGCTGGTCTCGGGAATAGACCTTTTTTTAGAGA
GGCAGCCATGTTGAATAATTAAGTACTCCAGCATAAAAACAATGATACAG
CCATGCATAATTTTTAAAATATGCATGATACATAATTATGCATGGCTGTA
TCATTGTTTTTATGCTGGAGTACATAATTATTCAATATGGCTGCCTCTTT
AAAAAAAGGTCTATTGTATGACAAATTTTGGTTGGTTGATTTTGGCTGCT
GCACGTTTTATTTTATTTCAAACTTTCAAGTTTTTAATTAATTGTCTTGC
GAACTTGGTTCAGGTAACTCTCATCCTTGTTGTGCAAATACATCCTGTAG
ATGACTGATGTTGTTTTTTCTGAAAGCTAGATTTCCTAGTGTGACTAACA
GCTGTTCGATTACTGAACCGCATCAAGCAGTTATTGAACCGAGATCCTGG
TAAAGTTGTATAAAGTTTGATTGTGTTTGATACTGTTCGATGTGTTCGAT
TTCAATTAAACAGTAAACCTCGGAACCTCGATCATCAGGGTGGGGCAAAA
GTAGTTGGCGCCCGCCCCGTAAAAACTGGAACCCTTTAGCATAGCATACA
TTAAAAAAAAGTTAGAAGGGTTCAAAGTTCACGGAAAAATGAAACATTTG
GTTTGACGTCAACAAGAGTTTTGTGACTTCGAGTCGCTATACAAACTAAT
AGAACTCTATTTGAACTCTAAACAAACTTAATCGAACAATATATTGTTTT
CAAACTATAATCAAACAGTAATTTCCGGTAAAGTTCAATTACTGTTTGAT
TTGGTTCGGTAATCGAACAGTTAGCATTTGATTAGTTCAATGAAATTCGA
TTGTTCGATTACGAAAATTGGTTCGATAACGTTCGGTTGGCAGTTAGGAA
CAGGAAGTAGGAAGATTGCTTGCTTGAAGATAGTCCCTACTAACTAACTG
GTTTTTGTCAAATCAGTCTATAGCTTAGTTTGGAGATCCATACTTTCTAA
CCAATACTTACAGTATAAAAGCAAAAAGCTCATACAGTAACCAAAAATTT
TGAAATTGTCAAAAATTGAAGGTCTTCAAATCTCTTTAAAACCTACTTTT
ATGGGAAGCTGTGGTATTTTCTAGCAAAAAGCAAAAAAAAATAGAGCTTA
AAGTCGCTTTAAAAACCTTTTTATCCCACTTTTTAGGTTTTTGTAAAATT
GCGGGCACAAATAAGAGAAAAAATAATTAAGTTTTGGTTTTTCTTCTCGT
TGACTTCGTTTTCAACCCTTCTAACCATTTTTGAAATGTACATAAAATTT
CTGAAAATTTGATATATAACATGCATATGTTCACAAAAAGTCAACATAGG
CTAAGTCTGAACCTGCTGCTACAGTGCTGAAAAAACTGCTTCGGAATGAT
ATGCCTTTATTAAAGGATTTTTTAAAGGTATGGATTCAAAATATTAACCA
AAAAGCCTCTTTTGCAAGCTGAATCAACTTTATATGGACTTGGACTGGTT
AAATCTATGATTTTGAGGTCTTGAAATCCATTTTTTCACAGACTAGTACT
AGGTCAGAGTTTTGGTCATGCTGTGATGGAAAATTTTCAATAGCCTGTAA
AAATCTATGAGAGTGGAATCAAGTCTTAATTTTCTACATGATACATCAAC
CCATCAGTGTTAATCAGAAACCTAAAATAGAAATTGAAAAAAAGTGAACC
CATCTAGCAAGGTAAGCCCAAGATTCGGATTTTCTATTTTTCCTATCGGT
ACAACCTAATTAAAAAGTACAATATAATGAGATCTTCGATAGAACCTCGA
CTCGAGATAGTCGCACCTATGTAAACTTTATTGATTTTGTGGATATGGAT
TGCATTTCTTTACATTACAGTGAGATAAAGTAAAATTCTATTGGTTGTTT
TTACCAATACATGGACTAATTTATGATAAAAAACTCCCTTTTCCTTTCCA
TGGCTCGATCTACAAGCAAAGTCATTGTATTTGATTGAATTATCCAATGA
AATAGAGTGGGATTATTGAAGTTGTGATTCTCACTCAAACTTTAAATTCT
GAAGAATGTTATATATTTCAGGAATATTTTGACACTGATTGTTAAAGATA
TTTAAAAAAAATACATGCCTTTTCTTATTTTCCCCAATTACAAATTTTAA
ACTAAGGCAAAATATTCAACTTTAAAGCCATCTAAAAGGAGACAAATTTA
TTTTTTATATAAGTGGAATCGACATTCTGCAACGGCTCTATGGAAAGAAA
TAGGGAATTTTCCTAAATCTAACATAAGTTTATAAGAATTTTATAGAACA
AGAATTTTTTTAAGTGGAATAGGCTTTCAGGGATTTAATTTATCAAAGAA
TAGCTAAAACATATTGTTTAAGAGTTATGAATTATGTTCTTATAAAGTTG
ATGCTTATAAGAAAAATAAATGTTTCTCTTTTAGGCACAATCCTATGTTT
ACTTTGAAAGAACCGATCACTGAAAGCTAATAATTATTGGTTTAATAGTT
ATGAATTGTTTTCTTATAAAGTTGATGCTTATAAGAAAAATAAATTTTTC
TAGCTTAAGCATAATCATATGTTTGCTTTGAAAGAACCAATCGCCAAAAG
CTAATATCTATTGTTTGGAGAATTATGAATTGTGTTCATATAAAGTTGAT
GCTTAAAAGAAAAACAAAATTTTCCTGATTTAGCACAGTCCCCTAGTTGC
TTATAGAACCAATCGCCGAAAGCTAATAATCATTGGTTTAAGAGTTAAGA
ATTGTGTTCTTATAAAGTTAATGCTTATAAGAAAAAATTTTTCTAGCTTA
AGCACTATCCTATGTTTGTTTTGAAAGAACCAAACGCCAAAAGCTAATGT
CTATTGGTTTAAGAGTTATGAATTGTGTTTTTATAAAATTGATGCTTATA
AGAAAAATAAATTTTTCCTCATTTATAGCACTGTCCCCTAGTTGCTTTGA
TAGAATCAATCGCCGAAAGCCAATATCACTTATAAAGATGATGCTTAAAA
GAAAAACAACAATCGCCAAATGTTTGCCATAGTCCAAGAACAATGCGATT
AAATACTTTGAAAAATTAATGTTAAAATTGAGTCAGTCTTTCAAAATTGG
CTCCTTTTTAGGTCAAAATCCAAGTAACCTGAAAATAACCCTTATCATGT
TATATATCAGTGGAAGCAGAATTTTGAGTAGATTATTAATATAATGCTTT
AACCAGTTAAAAAAGACGCATGTGCATGAGCTTTTTGCTTACATGAGCAG
AATTCCTCTGTTTTTGGCTGTCATTTGTCATCTCATGTACTGTATATATA
ATACACATGTTGAGATTTTTTTATATAGACAGTGTGTAGGCCAAGCCTCT
CAGCTATCTATAGCTAGGGAGATTCTGGTAGAAAAGAACACTTATTTTAT
TTTGCAGCTATGGTTAGTTTACACGGGCAGGATGGGTAATTTCAGGGTGA
GATTTCTACTTTGATCCCAGTGTGGAAACAATGCAAAGTCCACGCGCCGA
ATTGTTATTTGTTTAAACTAAGATCTACACCTAAAAAACTTCCGCTAAAG
AAACTGCAAAATTGCAGGGCGTTAGAATGGCGGTGCTCTTCTTGTCTTCA
AAAGCTTTGACTTACGCCAATATTTAACTTTATATCCGCTCCATACGCCA
ATACGTCAAAAGTATATATGGCCCAAACACCAAACATTTACCCAGAAAGG
GGTCATGTTAGGCAAAACATTTCATATAAAATTTGGGATCTTTGCCTTCA
AAAACCAGGCCCAAAACACTGAGCGTGTGTGGGTCAGTTCGGGTCATGTT
CAGGACTTTTCAAGTTTGAAATTACAAAGTGGTTCGATAAGTTCAGGCCA
TACTGTGGGTTGTCACCCAACATCTTCCATTATTTGTATAAATCATGGTC
AGATTTCCTTTGAAAATATGCAAAAAAACCTATGCAAAAATATAAACTTA
TTCTCAACTTCAGTTGAGCTACAATCTGACAATGTCTGTCTGTCTGTCTG
TCTCTGTGTGTGTGTGTCTGTCTGTCTGTCTGTCACAAAAACTTTAGGGC
AGCCTGGAGACTTCAAAAATGCTTGGATTTGGCTGAAATTTGGCACACTT
GTTCCTTGGGCGAATATCTGGGGGTATTTTTTTCATATTTTAAAAATTTT
GATTTTTGGGGCCTGGGGACGAGTTTTTCGTCAAAACGAGGCTAAAACTT
TTGGGCAGCCTGGAGACTTCAAAAATGGTCGGATTTGGCTAAAATTTGGC
TCACTTGTTCCTTGGGTGAATATCTGGGGGTGCTTTTTTTATTTTTTGAA
AATTTTGATTTTTGGGGCCTAGGGGCGAGTTTTTCGCCAAAACGAGGCTA
AAACTTTGGGGCAGCCTGGAGACTTCAAAAATGGTTGGATTTGGCTGAAA
TTTGGCACACTTGTTCCTTGGGTGAATATCTGGGGATGTTTTTTTAATTT
TTTGAAAATTTTGATTTTTGGGGCCCAGGGACGAGATTTCGCCAAAACGA
GGCTAAAACTTTAGGGCAGCCTGGAGACTTCAAAAATTGTTCGATTTGGC
TGAAATTTTGCACACTTGTTCCTTGGGTGAATATCTGGGGTTCTACAATT
GGCCCTATGAATAGTTTGAAAGCACTGAAGTTGAGCCCAGTGCGTTGCGC
ACGTTCGACTATATATACACAATGTTGGTTATTGATTAAAATTTAATCTT
GTAGATGAAAGATTAAAGGTTTGTTTTTAAATAAGATTGATATCGTTTGC
TTATACTCTTTCTTCAATCTTAATTTACAAGCTTTTCATTTGTTGAGTTT
ACACTAATGATGCTGGCAAACTGTCTACTGACTTTTTGCCGGCTGTAATT
GATGGATTGCCAGACTCAACAAGAGTGCCGGTATTTTTTATGTACTTAAA
ATCGCTTGTTGGAGATTCACATTATGTGGATTTTCTAACAAATTATAAAC
ATCAATATCTTTGCAACATATTACGGTATGGCACTCAAATTTTGGAAATG
AGTTAACATCAAAGAAAAGAAAATTTAGAAAAAAAAATTTCCTTTGTGAT
GACATCATATTATCATAATGGCCAGGGGGGGGGTCTTGCAGTTACTCCTT
GACACTATGTGGAGTAACTGCAATTTTGGACATTTTCTACAGACACCACC
ACCCTTGCAGTTATTCCATAGTGTACTNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNGTGTTTATATAATAACTGCATGACCCCCCCCCT
GTAATGGCGCCAAATTTTATAAACAAATAATTATGACAATTTTGGGGCAC
TGGACTGTCTTGGGCAATGAAAATTTTGGCAATCTAGTTAAAATTGTTTG
TGAGGAATTTAATTGAATTAAAAAATCTTTTCTACATCAAGAGCTATAGC
AGTTTAAAGTTATTAGGCCATTCTTTGGAAATTTTTGCAAAAGTTCTCAC
AAAAAACTGCTTCAATTATTTTTAAAGATTTTATGAGGGGTGGGATATTT
TGTCCCCCGGACTATAATTCCTCAAAAAGGCCTTGGTTATTCCCTCTGGA
AAAACTCTTTTGGCCATTCACTGAATTAATTCCCTATCCCACCAAAATTT
CTTCCCTAAAATATATACGCATTTATCAACTTAGATGAATAGTTTTCTTC
AGCTGAAGTTTATAATAATCTAGAAGTTTATTGTAATTTTAATTTCGACT
GATGTCAGAGAAGAGAAAGACAGGTCTAGAACCCTTTGTAGAGAGAGTGA
TTATGGGCTATGTGACAGGATTGAATTTATTCAATGGAAACTATCATTAA
AATTTTTCAATTTTTCCATTCTAGAATGGCTGAATCAATACCAAACATGG
CCCAAAAGGTAATTGAAGTAGTTACATCCAACTTTAGCTGGGAAATCTGG
CTCTGAAACCTTCTTTAATAAATGCTCTTTATGAATTTGCTTAACGCTGG
CTTCAGCAAAATGTTTCAAATTCAAGGACTTCTTTTTTTTAACTTTTGGA
CTTTGTATATTAACAACAGAGTTCCAAATGATAAATGACTGGTAACTCTC
TCCTAACCACAAGTACTAAGCAGCATTTGTGATGGTACCTCCAGCTTTTA
AACTTTTTCTCTTAGATAGAAACACGGGAAGATGAGGAGCAGGGAAAGAA
GTTTCATGAAACAGTTGATTTGCTTCTTGCTGCTGGATATTTTCGAGCAA
GAATTAAAGGATTATCTCCCTTCGATAAGGTTTGTTTATTTTCTTTAATT
CAATCTACCTCGAGGTCCTTTAAAACGACCCTTGTCTGTTCATTTGTCGG
TTTGTCCATCTGTTACTAACTTTTTTTGGGGATTGGCTTACATTAGTTTC
TTTTCTTAATTCTTTCACAAAGACTATGTCGGAAATGTGAGGGATCCGAG
AGTTTTTCTGATAAAAAATGCTAATTACATACTCGTTATATATTCAATAT
AATTATATCATATTATACACTTCTTTGGAAGGCAATTGGAATGTAAGCTT
CACTTTCAATTTATAATACTTCGGATGGCACTAATCCCATTATAAATTTC
TTGGATAGGTAGTTGGTGGTATGACATGGTGTATTACCACGTGTGATTTC
GATGTTGANTCATGAATTTCTTGGATAGGTAGTTGGTGGTATGACATGGT
GTATTACCACTTGTGATTTCGATGTTGATGTCGACCTTTTATTTCAAGAA
AACTCTACAATCGGTCAGAAAATGTATGATACTCTCAATATTTCATTTTA
TAAATCGTTGCTTACTCAGCTCCTTTATGTTAGATTCAAAAAAGCATGAC
TGTCAATAAAAACTGTACGGTCCCATTTTTTTCAATTTTGCATTGGATCG
TTTAACGATTCTTAAAAATCCATATTCATTTAAAAAGAAACTCCCTGTCC
TACATTAAAACATGATTCTTATTTCTCTACCGCAATATCATCCAAAGTCT
ATTCACGATAAGTGTGCACTCTTTTTTCTTTTACCTATAACTTTTGAAGG
AATTCTTCAATCTTCATAAATTTGGTATCATTTGAAAGATATTAGTGAGT
GGAACAATTTGAAATAAAAAAATCTTCAAAAAATTCTGAAAATGAAGATG
AAAATGAAGAAGTCATCACTGTGAAGAAATTTCATTAAAATATTTATTCA
ATATAAAGTTATGATACAAAGTTAATAAGTGATTGACCCCAAAAAACAGC
AAAAAACTGCAAAAACAGCGTTTTTAGACGTCAATCAGCTTATAACTTTG
TTTGATATCGTTTGACTGAATGATTATTTTTGAGAAATTTTTTCACAGTG
ATGACGTTCGATGATCAAGGATTCACTTCAGTGAAAATGATAGTTATACT
GTAGCACTTTTCTACAAGATCTTCATTTTTTTCTTCTTCATTTTCATCTT
CATGTTCAGAATTCTTTTAAAGATTTTTTTATTTCAAATTGTTCCACTCA
CTAATATCTTTCCAATGATACCAAATTTGTAAAGATTAAAGAATTCCTTC
GAAAGTTATAGGTAAAAGAAAAAAGAGTGCACACTTATCGTGAATAGACT
TTAGCATCCCATTCAGTATTTGAAAGCATATAAATAGCCCAGAGTTTGAC
CATTCAGTGATAGGCTCAAATTACTGTAGCCTTTAAACATGCCATAGTTA
CCATTGTTATTACTATTAGCACCAAAAAGACACATATTTGGCCACATCGG
TACTTCATAGTCCCTCATAGTAATAATCATCAAGTTAAATCAACTGTTGT
TTTACTCCTTCATTTGTTTTATTCATAGTGCATTGACTGAGAAGATTGTT
GCAGTTTTACCAAAGATGAAATGTCCACATCGCATAGAACCTCATCAAAT
TCAAGGGCTCGATTTCATTCATATATTTCCTGTCATCCAGGTACCATATC
ACCAACACAATTATATTCATAACATTGTTAATAATATTTGAAAAAAAGAC
AGTTTGGTTAGAAATTACATCTCCCTCCGTAATACTATAGTAACTTCGAG
ATAATCAGGGTCAAAAAGCTTACAATGTTAATGTTACAAATCATTGATTA
CTAGTTTAATTACTGAAAATTTCAAAAAAGAATTTCGAATTTGATGAGGT
CATCGTTTTTTTTGCTAAAAAACTGAAATCCTTAAAAAATTCTGATGGAT
CATAATTTTGAAAATTTATATAACATGCACCTTTGGTCAAAATTTGTAAT
TGTTGTTTCATCAAAAGTCATTAAATAAAATCTTTATGACGTCATCGAAA
AAACTCGAATTGGTGTTTTTGCGAATCACGCCAGATTTCCTAAACAGAAA
CCATCTCCTTAGAAAAATCTTAATCTACTCATTAATTTACCTCTCTCAAG
CCCAAAATGAGCTTCTAGAACAATTTGTAACGTTGCAAGTCTTTGACCCC
TGTAGAATAAGAACTTTCAAAAATTCTTTTACTTAATTTTATGATGTTGA
CGTTTTATTTTCAGTGGCTTGTAAAGAGGGCAATCGAAGTTCGAGAAGAA
TTGGGTGATAAGATTCGTGAATACTCAATTAATCAATTTCACAAATCATA
TTCCATGCCCAAAGATGAAGAAGCAAAGGAAAAAGAATTCCTATCCCTTG
ATGCCGTCAAAACATTCAAGGTTTTGATTATTTTTGTTAAAATCGTTTAA
AGGTTTTATTTTTGAATAAGAGTGATATCGTTTGCTTACACATCAATTTT
AATTTACAAGCTTTTTCACATTGGATTGACACGGATGTGGAGCAAGATTG
GTCAGAACAAGGAAAAGAAAAACGCTTTTTTGCTAATATCAGCAAAATAT
AATAAAAGGCAGACACTGTCCTGATATGAAATATGTGTCTGACATGAAAC
GGAGACACTTTGATATGTGAAAAGAAAACTTTTAAGATCGCATTAACTCC
GAACTTCATTACTTCATTTATATGAAGTTGTTCTTTCAGTTAAGTTCAGT
AAAATGATTCTCTTCTCTTTATAGTCGCATCCTTCGGATAGTGGATTTTC
TTAATCCTTTATTGTTCCGGTTGAAAATTGTATGCTATGCCTGTGAAAAA
CATACTTGCGTAGAAAAAGCTACAATACTATTGACAATAATGTGTCATTT
CAGTGGTTTTGTTTTATTGCTTTTTTATTCCCTTATCGGACTAAAATTCG
CATTCCTTCAAATTCAACCAAATTTAATTTTTATAATGCAACAGGAATCA
TACAAGCCAAAACGAATGTTCAAGAAGCCCTCCAAGTTTGCCAAAGCTGA
TGAAGACACACAAGTTCAAAGCACGCTCTTAGAATACGGTCAACGCTTTG
GTTTCAGTGGGAGTAAAGCAAACAAGGAAGAAACAGAAGCCAAACAAAAA
GCCATTGCTGCAGGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_038876XLOC_038876Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00062025-exon-scaffold_361-1575043694:895931..895990TCONS_00062025-exon-scaffold_361-1575043694:895931..895990Clytia hemisphaericaexon
TCONS_00062025-exon-scaffold_361-1575043694:889383..889416TCONS_00062025-exon-scaffold_361-1575043694:889383..889416Clytia hemisphaericaexon
TCONS_00062025-exon-scaffold_361-1575043694:889012..889125TCONS_00062025-exon-scaffold_361-1575043694:889012..889125Clytia hemisphaericaexon
TCONS_00062025-exon-scaffold_361-1575043694:888666..888682TCONS_00062025-exon-scaffold_361-1575043694:888666..888682Clytia hemisphaericaexon
TCONS_00062025-exon-scaffold_361-1575043694:888518..888595TCONS_00062025-exon-scaffold_361-1575043694:888518..888595Clytia hemisphaericaexon
TCONS_00062025-exon-scaffold_361-1575043694:887351..887462TCONS_00062025-exon-scaffold_361-1575043694:887351..887462Clytia hemisphaericaexon
TCONS_00062025-exon-scaffold_361-1575043694:886621..886776TCONS_00062025-exon-scaffold_361-1575043694:886621..886776Clytia hemisphaericaexon
TCONS_00062025-exon-scaffold_361-1575043694:885876..886046TCONS_00062025-exon-scaffold_361-1575043694:885876..886046Clytia hemisphaericaexon
TCONS_00062025-exon-scaffold_361-1510915933:895931..895990TCONS_00062025-exon-scaffold_361-1510915933:895931..895990Clytia hemisphaericaexon
TCONS_00062025-exon-scaffold_361-1510915933:889383..889416TCONS_00062025-exon-scaffold_361-1510915933:889383..889416Clytia hemisphaericaexon
TCONS_00062025-exon-scaffold_361-1510915933:889012..889125TCONS_00062025-exon-scaffold_361-1510915933:889012..889125Clytia hemisphaericaexon
TCONS_00062025-exon-scaffold_361-1510915933:888666..888682TCONS_00062025-exon-scaffold_361-1510915933:888666..888682Clytia hemisphaericaexon
TCONS_00062025-exon-scaffold_361-1510915933:888518..888595TCONS_00062025-exon-scaffold_361-1510915933:888518..888595Clytia hemisphaericaexon
TCONS_00062025-exon-scaffold_361-1510915933:887351..887462TCONS_00062025-exon-scaffold_361-1510915933:887351..887462Clytia hemisphaericaexon
TCONS_00062025-exon-scaffold_361-1510915933:886621..886776TCONS_00062025-exon-scaffold_361-1510915933:886621..886776Clytia hemisphaericaexon
TCONS_00062025-exon-scaffold_361-1510915933:885876..886046TCONS_00062025-exon-scaffold_361-1510915933:885876..886046Clytia hemisphaericaexon
TCONS_00062025-exon-scaffold_361-1491911889:895931..895990TCONS_00062025-exon-scaffold_361-1491911889:895931..895990Clytia hemisphaericaexon
TCONS_00062025-exon-scaffold_361-1491911889:889383..889416TCONS_00062025-exon-scaffold_361-1491911889:889383..889416Clytia hemisphaericaexon
TCONS_00062025-exon-scaffold_361-1491911889:889012..889125TCONS_00062025-exon-scaffold_361-1491911889:889012..889125Clytia hemisphaericaexon
TCONS_00062025-exon-scaffold_361-1491911889:888666..888682TCONS_00062025-exon-scaffold_361-1491911889:888666..888682Clytia hemisphaericaexon
TCONS_00062025-exon-scaffold_361-1491911889:888518..888595TCONS_00062025-exon-scaffold_361-1491911889:888518..888595Clytia hemisphaericaexon
TCONS_00062025-exon-scaffold_361-1491911889:887351..887462TCONS_00062025-exon-scaffold_361-1491911889:887351..887462Clytia hemisphaericaexon
TCONS_00062025-exon-scaffold_361-1491911889:886621..886776TCONS_00062025-exon-scaffold_361-1491911889:886621..886776Clytia hemisphaericaexon
TCONS_00062025-exon-scaffold_361-1491911889:885876..886046TCONS_00062025-exon-scaffold_361-1491911889:885876..886046Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_361supercontigscaffold_361:885876..895990 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	2.03587	0	0	0	0	0	0	0	0	0	0	1.30248e-08	0.00628332	1.55583	5.59367	0.392617	1.35959	3.18998	3.94312	1.3129e-05	0.0957279	0	0	0.317015	0	0	0	0	0
Blast
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BLAST of TCONS_00062025 vs. Swiss-Prot (Human)
Match: CCD93 (Coiled-coil domain-containing protein 93 OS=Homo sapiens GN=CCDC93 PE=1 SV=2)

HSP 1 Score: 303.523 bits (776), Expect = 2.444e-98
Identity = 138/217 (63.59%), Postives = 180/217 (82.95%), Query Frame = 2 
Query:   95 IETREDEEQGKKFHETVDLLLAAGYFRARIKGLSPFDKVVGGMTWCITTCDFDVDVDLLFQENSTIGQKIALTEKIVAVLPKMKCPHRIEPHQIQGLDFIHIFPVIQWLVKRAIEVREELGDKIREYSINQFHKSYSMPKDEEAKEKEFLSLDAVKTFKESYKPKRMFKKPSKFAK-ADEDTQVQSTLLEYGQRFGFSGSKANKEETEAKQKAIAAG 742
            +ETREDEEQ  K  E ++LL+AAGYFRARIKGLSPFDKVVGGMTWCITTC+FDVDVDLLFQENSTIGQKIAL+EKIV+VLP+MKCPH++EPHQIQG+DFIHIFPV+QWLVKRAIE +EE+GD IR YS++QF K+YS+P+D++  +++  ++  V    E YKP+R +K+     +  DE++++ +TLLEYG+R+GFS  ++  E+ E K+ A+ AG
Sbjct:   15 VETREDEEQNVKLTEILELLVAAGYFRARIKGLSPFDKVVGGMTWCITTCNFDVDVDLLFQENSTIGQKIALSEKIVSVLPRMKCPHQLEPHQIQGMDFIHIFPVVQWLVKRAIETKEEMGDYIRSYSVSQFQKTYSLPEDDDFIKRKEKAIKTVVDLSEVYKPRRKYKRHQGAEELLDEESRIHATLLEYGRRYGFS-RQSKMEKAEDKKTALPAG 230
The following BLAST results are available for this feature:
BLAST of TCONS_00062025 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CCD932.444e-9863.59Coiled-coil domain-containing protein 93 OS=Homo s... [more]
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