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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00062018 ID=TCONS_00062018|Name=TCONS_00062018|organism=Clytia hemisphaerica|type=transcript|length=2058bp
ATTTGGTTATGTTTATACATCAACCACAGATGGAGATCCAGGGATAATTA
ATCTTGCATCGAGACAGGTCAACATCGAATCCATGTTTTACAAGCGAGAT
GAAGGAGAGAAGATCAACACCGTGGCTCATGAAATATCACATTCAGCACT
ACAAACATCAGATTATTTGCCACAGTTTATGaatgaAACAACCAACGAAC
TTCAACCTACAAACACATCAAAAGATCAAACAATCTATGGAAAAAAGAAG
GTTGAAAAGGTTGCTGAACTGAATCTCGGTGGTAATATAGGTGACTGTCA
TGGATATTTGGCAGAAAACCTTTACCGCAAAAAATACATAGGGCCAATGG
GAGAAAAAGGGCGATTTGACAACATCGCAAATGTGATCGGCTGCAAAGTC
AATAAAATGCGCGCAAAGAGGCTTCAGAAAGTTGGTGCTTATATCAAGCT
CGATGGTAAAGATGTTGTAAAGCCAGGATCAAGTTCTTGTCCAAATTGGG
ATACACAGTACACTTCTACGGGAAAAGTAAAACGTACAAAGAAAGGAAAA
GTTCGAGTTAAAAAGGCACACAGGTCAAGAAGAAAGAACGAAAACGCTAT
TGGACATCCTAAGCTAACAGCTATTCGTCAACCAGGGAAACGTAAAGTTC
CGAAGAAACCTCATTTCGCTTTAGATGATGTTTACTTCCACAAGCTTAAT
AACAGCGTAGGTGGCGTCAGCTCGAAAATTGGTAGCTGCTCNCATGGATA
TTTGGCAGAAAACCTTTACCGCAAAAAATACATAGGGCCAATGGGAGAAA
AAGGGCGATTTGACAACATCGCAAATGTGATCGGCTGCAAAGTCAATAAA
ATGCGCGCAAAGAGGCTTCAGAAAGTTGGTGCTTATATCAAGCTCGATGG
TAAAGATGTTGTAAAGCCAGGATCAAGTTCTTGTCCAAATTGGGATACAC
AGTACACTTCTACGGGAAAAGTAAAACGTACAAAGAAAGGAAAAGTTCGA
GTTAAAAAGGCACACAGGTCAAGAAGAAAGAACGAAAACGCTATTGGACA
TCCTAAGCTAACAGCTATTCGTCAACCAGGGAAACGTAAAGTTCCGAAGA
AACCTCATTTCGCTTTAGATGATGTTTACTTCCACAAGCTTAATAACAAC
GTAGGTGGCGTCGGCTCGAAAATTGGTAGCTGCTCCGTAAAGCAAGAGAA
AGAAAAAGCTGGTCAGATTGAAAAATCGAGTCTTGGCAAGAAAGACGAGA
AAAGTGCCAAAGAAGAAAACACCATTGTAGATCTCGTTCATCAAATGTCT
CTGGAAGCTGGTTTAAAGATATCAGAGGATGGTGTCAAGCGTGTTGTCCA
TCATAAACTGGAGATGACAGAGGAGGGAGGAGGAGGCGGAGGGGGCGGAA
TCTCAGACGAAGAGGATGAGCAAGAAAAAGAGCTTTGCAGATTCTGTAAA
CCAAAAGGATATCCATGTTGTATGAAATGTTTGACCGGTCAGAGCTCGAA
GAGAATTCGAAGTTTTGGTAATAACATTCatggttttgaaaattaatttc
ttttgcgctgttttcattttataaagAAATCAATGTACAATTTGTTCAAC
GTATCAACTTCTTTTAGCATTCTGTATTATTTTAAAGTATTGAATATCGA
AGtccttatttttattattaaagtTTTTATTATAAAGTATTCAATAAGTG
GCGAATGTGATGATTTAACAAGCTTGTTCAGCTGATTCCGTCAAAGGCGC
CGCCATCTTGCCTGAGATCAAAACTAACTGCCCTGGCTTCTGATGTctac
ataaaaaatgacgttatgtTTGCTTCGGCCAATCACGACCATCAACGGAC
TAGTCCTCTTACGGAGCAGTGAACTTTAGAGTTCATACATGTCATGCGCG
ATCTTCCTGGTGATTattaatattcattttttttaataataaagtATTCC
ATAGCCAAACTATTATTTTTTGTACattggaaaatttatttttggagGTC
TATGTTAAGCAAGCGTTCATGTGTTTTAGGCTGTGTTGTGTAATACATTC
TCTTTTCC Run BLAST on NCBI transcript from alignment at scaffold_361:814692..817112- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00062018 ID=TCONS_00062018|Name=TCONS_00062018|organism=Clytia hemisphaerica|type=transcript|length=2421bp|location=Sequence derived from alignment at scaffold_361:814692..817112- (Clytia hemisphaerica)
ATTTGGTTATGTTTATACATCAACCACAGATGGAGATCCAGGGATAATTA
ATCTTGCATCGAGACAGGTCAACATCGAATCCATGTTTTACAAGCGAGAT
GAAGGAGAGAAGATCAACACCGTGGCTCATGAAATATCACATTCAGCACT
ACAAACATCAGATTATTTGCCACAGTTTATGGTGAGTCCAGCTTCAAAAC
CTCCAAACCATTAACCCTTACGTGTTATCTTTTTAAATCTTTTTCTTTTA
GTATCGGAATTTGGGTCGAAATTATTGAACTCAAGGGAAACGAGGGAAAC
GATTGATACCATCGAATAGAGCATAAAGTGCTGCTAGTTTGCATACCATT
GACTTAGATTTCTCAATCTCTGATTAGTATCTTCATATGGCCGTTTATCT
TCGTGTGTTTGAGTATGGAACCCGAGCCCATCATCTGTGATCAGTGGATA
CAATTGCATGAATAGTTGAAGACCGCAATCAATCCAATCTATATATTGAG
ACTTGCAGATTCTTACTACGTTTGCTCTTAATTGTTTTTTTTAGAATGAA
ACAACCAACGAACTTCAACCTACAAACACATCAAAAGATCAAACAATCTA
TGGAAAAAAGAAGGTTGAAAAGGTTGCTGAACTGAATCTCGGTGGTAATA
TAGGTGACTGTCATGGATATTTGGCAGAAAACCTTTACCGCAAAAAATAC
ATAGGGCCAATGGGAGAAAAAGGGCGATTTGACAACATCGCAAATGTGAT
CGGCTGCAAAGTCAATAAAATGCGCGCAAAGAGGCTTCAGAAAGTTGGTG
CTTATATCAAGCTCGATGGTAAAGATGTTGTAAAGCCAGGATCAAGTTCT
TGTCCAAATTGGGATACACAGTACACTTCTACGGGAAAAGTAAAACGTAC
AAAGAAAGGAAAAGTTCGAGTTAAAAAGGCACACAGGTCAAGAAGAAAGA
ACGAAAACGCTATTGGACATCCTAAGCTAACAGCTATTCGTCAACCAGGG
AAACGTAAAGTTCCGAAGAAACCTCATTTCGCTTTAGATGATGTTTACTT
CCACAAGCTTAATAACAGCGTAGGTGGCGTCAGCTCGAAAATTGGTAGCT
GCTCNCATGGATATTTGGCAGAAAACCTTTACCGCAAAAAATACATAGGG
CCAATGGGAGAAAAAGGGCGATTTGACAACATCGCAAATGTGATCGGCTG
CAAAGTCAATAAAATGCGCGCAAAGAGGCTTCAGAAAGTTGGTGCTTATA
TCAAGCTCGATGGTAAAGATGTTGTAAAGCCAGGATCAAGTTCTTGTCCA
AATTGGGATACACAGTACACTTCTACGGGAAAAGTAAAACGTACAAAGAA
AGGAAAAGTTCGAGTTAAAAAGGCACACAGGTCAAGAAGAAAGAACGAAA
ACGCTATTGGACATCCTAAGCTAACAGCTATTCGTCAACCAGGGAAACGT
AAAGTTCCGAAGAAACCTCATTTCGCTTTAGATGATGTTTACTTCCACAA
GCTTAATAACAACGTAGGTGGCGTCGGCTCGAAAATTGGTAGCTGCTCCG
TAAAGCAAGAGAAAGAAAAAGCTGGTCAGATTGAAAAATCGAGTCTTGGC
AAGAAAGACGAGAAAAGTGCCAAAGAAGAAAACACCATTGTAGATCTCGT
TCATCAAATGTCTCTGGAAGCTGGTTTAAAGATATCAGAGGATGGTGTCA
AGCGTGTTGTCCATCATAAACTGGAGATGACAGAGGAGGGAGGAGGAGGC
GGAGGGGGCGGAATCTCAGACGAAGAGGATGAGCAAGAAAAAGAGCTTTG
CAGATTCTGTAAACCAAAAGGATATCCATGTTGTATGAAATGTTTGACCG
GTCAGAGCTCGAAGAGAATTCGAAGTTTTGGTAATAACATTCATGGTTTT
GAAAATTAATTTCTTTTGCGCTGTTTTCATTTTATAAAGAAATCAATGTA
CAATTTGTTCAACGTATCAACTTCTTTTAGCATTCTGTATTATTTTAAAG
TATTGAATATCGAAGTCCTTATTTTTATTATTAAAGTTTTTATTATAAAG
TATTCAATAAGTGGCGAATGTGATGATTTAACAAGCTTGTTCAGCTGATT
CCGTCAAAGGCGCCGCCATCTTGCCTGAGATCAAAACTAACTGCCCTGGC
TTCTGATGTCTACATAAAAAATGACGTTATGTTTGCTTCGGCCAATCACG
ACCATCAACGGACTAGTCCTCTTACGGAGCAGTGAACTTTAGAGTTCATA
CATGTCATGCGCGATCTTCCTGGTGATTATTAATATTCATTTTTTTTAAT
AATAAAGTATTCCATAGCCAAACTATTATTTTTTGTACATTGGAAAATTT
ATTTTTGGAGGTCTATGTTAAGCAAGCGTTCATGTGTTTTAGGCTGTGTT
GTGTAATACATTCTCTTTTCC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00062018-exon-scaffold_361-1575043694:816932..817112 | TCONS_00062018-exon-scaffold_361-1575043694:816932..817112 | Clytia hemisphaerica | exon |
| TCONS_00062018-exon-scaffold_361-1575043694:814692..816568 | TCONS_00062018-exon-scaffold_361-1575043694:814692..816568 | Clytia hemisphaerica | exon |
| TCONS_00062018-exon-scaffold_361-1510915933:816932..817112 | TCONS_00062018-exon-scaffold_361-1510915933:816932..817112 | Clytia hemisphaerica | exon |
| TCONS_00062018-exon-scaffold_361-1510915933:814692..816568 | TCONS_00062018-exon-scaffold_361-1510915933:814692..816568 | Clytia hemisphaerica | exon |
| TCONS_00062018-exon-scaffold_361-1491911889:816932..817112 | TCONS_00062018-exon-scaffold_361-1491911889:816932..817112 | Clytia hemisphaerica | exon |
| TCONS_00062018-exon-scaffold_361-1491911889:814692..816568 | TCONS_00062018-exon-scaffold_361-1491911889:814692..816568 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_361 | supercontig | scaffold_361:814692..817112 - |
Blast
The following BLAST results are available for this feature:
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