|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00061966 ID=TCONS_00061966|Name=TCONS_00061966|organism=Clytia hemisphaerica|type=transcript|length=676bp
CCTGTTCCATCCCAGAACGCTTCAATGGTGTAATTCCGTTCTTGTTTTGT
CACATGTTTAGCTGGATAACCTTGGTTCTGAACATTGATCGAGTTGACTA
AATTCAAAACATGCCAATCATAGGGAGGACTATTGGTTAAGATTCCAATT
TTATTATCAAATACTTGTCGACCTTTTCCTTTCGTGTATTCAATCACAAT
AGAATCTCCACTTCGGTCAGCCAATCTCAAATGCAGAGGAAACTGGTATT
TATCTATCTTGATGTCTCCATGCCATTACGTGACGTATTGACCCCAAACA
AATGGAAAGATATCGTACTTGAAAGCTATACGGACCTGCTCAACGCTGGA
AAAATTACCTAGCAAATAATTGATCAATTGCATGTGTGGTATGGAGTGAC
TACAGTGTTGCTCAGGTACTGCATCAGGGTACTCTGTAAACCCTTCAAAC
CATAAAGCTCCTGCAGACAGGCCAGCCTCGTTCTGACCATCCACAATTGA
TCGATTTGAATTAGAGAAATCACCTGCTGACTTGATTCCTAGAATTTTAT
ATCTAGTAAACCATGTTAATGGTGAATGGGTTTGGCAGTTTTCCGGTAAC
ATTGCAAACTCTTTGTATCCCTTAGGCACAACACCAACCACCCACGGGAA
AGCAAATTCGAATTCCATCGTTCGCC Run BLAST on NCBI transcript from alignment at scaffold_361:81226..82312- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00061966 ID=TCONS_00061966|Name=TCONS_00061966|organism=Clytia hemisphaerica|type=transcript|length=1087bp|location=Sequence derived from alignment at scaffold_361:81226..82312- (Clytia hemisphaerica)
CCTGTTCCATCCCAGAACGCTTCAATGGTGTAATTCCGTTCTTGTTTTGT
CACATGTTTAGCTGGATAACCTTGGTTCTGAACATTGATCGAGTTGACTA
AATTCAAAACATGCCAATCATAGGGAGGACTATTGGTTAAGATTCCAATT
TTATTATCAAATACTTGTCGACCTTTTCCTTTCGTGTATTCAATCACAAT
AGAATCTCCACTTCGGTCAGCCAATCTCAAATGCAGAGGAAACTGGTATT
TATCTATCTTGATGTCTCCATGCCATTACGTGACGTATTGACCCCAAACA
AATGGAAAGATATCGTACTTGAAAGCTATACGGACCTGCTCAACGCTGGA
AAAATTACCTGAAATTATAAAGTGTGAAGATTTGTTCAACATTTACATTC
ACGCTAACGATGCTTTTTTGTGAAGCAAATTATTTTTTTTTCAAAGAGTG
AAAGTTTCTTTTAGTTTGAGACCTGACTCACATAGATCTAAAAATGAAAT
ATCTAACTATGATATTATCTTGTTTTTCATAAAGTGTACTAAGAGTTTTT
TTTCACAAGTTTGTGACATAAAATATTCTTGAAATTGTTTTTCCTCTAAA
ATGATTTAGTGCGTGGTGAAAAAATACCTTAATAACATCAAATTATGTAT
TGTATGAGGGAAATCTTATTTGGAAAATCACGGTGTTTTTTTCTGAATGA
TAAAAGGGTCCTTGTTAAGTAAGCCAAGATTGTAGAACTTATAAACGTAG
AAATAAGAATATACATTACCTAGCAAATAATTGATCAATTGCATGTGTGG
TATGGAGTGACTACAGTGTTGCTCAGGTACTGCATCAGGGTACTCTGTAA
ACCCTTCAAACCATAAAGCTCCTGCAGACAGGCCAGCCTCGTTCTGACCA
TCCACAATTGATCGATTTGAATTAGAGAAATCACCTGCTGACTTGATTCC
TAGAATTTTATATCTAGTAAACCATGTTAATGGTGAATGGGTTTGGCAGT
TTTCCGGTAACATTGCAAACTCTTTGTATCCCTTAGGCACAACACCAACC
ACCCACGGGAAAGCAAATTCGAATTCCATCGTTCGCC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00061966-exon-scaffold_361-1575043694:81960..82312 | TCONS_00061966-exon-scaffold_361-1575043694:81960..82312 | Clytia hemisphaerica | exon |
| TCONS_00061966-exon-scaffold_361-1575043694:81226..81548 | TCONS_00061966-exon-scaffold_361-1575043694:81226..81548 | Clytia hemisphaerica | exon |
| TCONS_00061966-exon-scaffold_361-1510915933:81960..82312 | TCONS_00061966-exon-scaffold_361-1510915933:81960..82312 | Clytia hemisphaerica | exon |
| TCONS_00061966-exon-scaffold_361-1510915933:81226..81548 | TCONS_00061966-exon-scaffold_361-1510915933:81226..81548 | Clytia hemisphaerica | exon |
| TCONS_00061966-exon-scaffold_361-1491911889:81960..82312 | TCONS_00061966-exon-scaffold_361-1491911889:81960..82312 | Clytia hemisphaerica | exon |
| TCONS_00061966-exon-scaffold_361-1491911889:81226..81548 | TCONS_00061966-exon-scaffold_361-1491911889:81226..81548 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_361 | supercontig | scaffold_361:81226..82312 - |
Annotated Terms
The following terms have been associated with this transcript:
Blast
The following BLAST results are available for this feature:
|
