TCONS_00061954 (transcript) - C. hemisphaerica

Overview
NameTCONS_00061954
Unique NameTCONS_00061954
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2685

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00061954 ID=TCONS_00061954|Name=TCONS_00061954|organism=Clytia hemisphaerica|type=transcript|length=2685bp
gtttgtttgtttgttaatGCAAAGATATGAAAGTTCAATTGTTGAAGTTC
AgaagaatatcttcaaattcGAATGAAGAAGAAGAGCCTCTGCCTCCGCA
TCCGCTACAACATCAAATCTCCAATGGAGGGGGCGGAGAGCGCCTCGCCT
CACCCACCAGCACCATCGCTCCACCCAATGATTTATCACCGCCCCCTTCG
ACTTCAAGTAACAAAGCTGCCTCCCCGATGATGCCGAAAAAACTTTTAGG
ATCGGAAAGCAAAAGCGGTGGCTTCAAAGGTTTCAGTCGCCGACTGTCGA
AACGAGTTACGGGAGGTACCGACGAGGAGAAAGATAAAACGAGGATCAAA
GACAAgctgaaaaaatatttatccaaaCGACCTTCGTTCAACGAACTCGA
AAGTAAAGGAATTATCGCAGattttgttttTGGCTATCCGCTCGAGAAAC
TTTGCGAACGTGAAGATAATTTGGTACCTCGATTCATTGTTCAAATTGTT
CATGAGGTCGAAAAGAGAGGACTTGATGTGGATGGCATATATCGTGTCTC
TGGTAATTTATCGTCAGTCAATAAACTACGTGGACTAATCGACAATGgtG
AGATGCCGGACTACTCTCAACCAGAATGGAATGACATTCACTTACTGACT
GGttgtttgaaattgtatttTCGCGAACTCCCCGAACCTCTTCTACCCTT
TCACCTGTTCGATCGATTTGTTGGTGCTATGAaaAGCCCTTTCAAGCCTG
AGAAGCTGAAACTGATGAGGGAAGTCGTCTCAGAGCTAAAAGCTGAACGC
AAAGAGACTTTAAATCTGCTACTCACGCATTTTAACAGGGTGATGTCTAT
GTCTTCGAAGAATCGAATGCATTCACAAAACATTGCTATTGTTTTCGGAC
CGACGCTGATGTGGCCTGAAACGGACTCTATAAATGTTGCTATGACGAcg
gtttttcaaaatcaagtcATTGAATTTCTTGTGCAAGAGTGGAACGATGT
TTATACGATGTAACACAAATTGCTTGGTGCTAATGAAATGGTTTTGTTAC
GAATTACTTCGTTTGTTTTAAAGTGAGGCTAATTTGTATGGGAGTGAGGC
TGAGTTGTTTATTTCAGATGAATGGTTCCTGAAGACTTCCGAGGTCTTGT
GTATGCCAACGAACTGGTTTGCCACCGAACCTGGATCTTAATCAGTTAGA
GTATTGACACAACTGGACATCATTTtccccccaataattttggGTGTGGT
CTATGACAACGTGTGAATGACATCAATGCGAACATTTCTGGTGCAGGTGA
CAGAACCTTGCTGCAACTGCTAGATGCTTGCCTTGTTCAATAAATAATGA
ATAAATGTTGTATTGATTTCGCTTTTCCAATAACACAATAACTCGCTCAC
CAACAGCCTGAGTTTGATTTCTCACTGTTTTTAAGAACGGTCGATGAAGT
GACAGAAAAATGAtgactttcaaaaaacaatgataaagaaTGAATGAtgt
tgaatgaatgaatgaatgaaaataaTACAGCAAGTTTAGAATTTGATAAT
TAAAGAAatagcaataatttcaaaatttttaatataaCGTCTATATAAAT
ATGTCTAGAATTTttagttaatttttttattactacTGATGGTCGGTTTT
TGCTACATGTGAATTTATTATATTATTGTTATTGATGGATTTATATGAAA
ATTATCTTGTCCAATGTTTTTAGGGGAGGGCACCTGTTTTTCTGAGATGT
TCCTTTTTTTCTGCGTTTTAAGttacttttttatgttttttaaggTTTAT
TTATTACTGTCACTTTCGCCAACCGATACCTACAGCGTTTCAAAAGAAGC
CTGTGTTTTCTCGTTGATTTCCTCTGTACAAAGTcaactgttttcaaatt
ttaaacttttttttttcgttcagttctttttttttttgttcgttctCTTA
TTGgacatttttttatgtttttttgtactttttgctATTTGTTATTTCAC
AACGACATAATTcaatttcgaaaataatttgTTCAATCATAGACAAGGAC
AACAAATAATTCATTATAAAAGTAGTCCTGAAACCATTTGTTTTAGGTGT
GCACTAGTTTTTGTTATCCCTGCTACTTTTGAACAAATGTTTTAATGtaa
tcttaaaaagttataaacctttgaaaaacctttgaaaagataattcagag
gtCTTTAACTGACAAAAGATGATgataaatttgcgaaaaaacagagaaga
aaaagaatttaatATCCCTTGATTCTAGAAACTTTATTTTTGGTACTAAA
TTACTTTGAAGCCCTGATTTCaactaaataattatttttccctGCATTAT
TGCATCTAAAGTTGCAGCCTTCAACGAGCTACCTTTTGGAGACtgtaatt
tttgaaacattcattcaaaaatggcaagcaaaacaaGGATAAGTGCAAAC
TTAAAAGCGAATTGACtctagtttttaatttttgttggaatgatcttttt
gattttatctGCTACCAGTGATCGAATTTCCTATTATGTAATATACTTAA
ATCATCCGACTACCAGTCGTCTACTACTAAACTTGAAACTAAAACTGTGT
AAATTTTCTTGCTTTTGCTTAATATCAAattgtttttgtataaaaaagat
ATAATTATCAAACCTAACCATTTGTTACGTCGTTT
Run BLAST on NCBI

transcript from alignment at scaffold_361:1653823..1660781+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00061954 ID=TCONS_00061954|Name=TCONS_00061954|organism=Clytia hemisphaerica|type=transcript|length=6959bp|location=Sequence derived from alignment at scaffold_361:1653823..1660781+ (Clytia hemisphaerica)
gtttgtttgtttgttaatGCAAAGATATGAAAGTTCAATTGTTGAAGTTC
AgaagaatatcttcaaattcGAATGTAAGTTTCCTTTTCATCGAAACACA
TTTTGAAGGCTTATTCAATGAAAGTATGTActgttgactctctctaattc
gatctttatggaaccaaagttgttttttttcaaattagagaaaaattcaa
attttaaccaCTTTCGAGGgatcaatattttagttcgaattacaaaaaaa
ttcgaataatagaggttcgaattagagtgaGTTGATTTCAATGGAAGGAT
GATTTAACCCTTTGTGCGCGCtggtttttttttaagttgaaGTGTGTCAG
GTGCTATAGCCCGAACTAGAAActaaatttcatcaaaacaaGTACATCCA
TACCAAATTCATGAAAACGTTCTACTGCATGCCCTCAATCCCTCTTCTTA
AAGCTGAGTAATTCAGTTATAGTTCCCTTGTATGACTCAGATTTATGCAT
TATTAATAACCTAAAAAAGTACCTTTTTACAGATTTTGTTACTAGTACTT
TCACAGTAAGTATTTTTCCGAAAACTTTCTAACACACAACAAAGCATAGC
CATCTGCCATGCGATGCTTACTTTAAATACCGTGGAAGCTGTCACTCTTA
CTCACTCTTACAAGGCAAAAGAGACGATCAACTGAAAATGCTTTAttcgt
tttgtttttttaattctcgGATGTAATGTATCTTACCAacacataacttt
ttgaaaactaATAATGCCAGTGGCCAATTCAAATCTCTGCGTTCTTGTTT
ATAACACTTTATTTTCCACCGAATCTGCCACGAAACGAAGATTTCTCAAG
CTACCAGATTGTGATGCATGATACTCACAAACTTTTCCTTTCCTCGTTCT
CCTTATGCAAATGATTGAGCTTGCACTTCTTTTATTTACtttctttcttt
ggtttttatttgaCGAATATTCTCTTTTGCTTGCTTTCATCAGATTCCAA
AAGTTTCTTTGACATTTGAATGTCTTTTAAAAGAGGAGTTTACTCGATGT
TATGTTTTAACAAAAACTTCAGGTAGATATTGGTTGTTGGTTGTTTTGGA
TAGGTTTGTTGGTAAATTAGAAGTTCAATCGACACTAAGACTTGTTATTT
TTAGATCTAGCTCCCTAAGGAATCTATTTTAAAAGTAGTTTTCAAACTTG
AGGGCGGTGGTTTTTGCATGGGAGGGAGCAATAACAGTTTGACAATTTCG
TATTTCTACTTGTATATCCAATCTTCGACATACTTGATCGAGCCTTCTGT
CTACTGACTAATAATCTAATTTAAAGTGATAGAACTAACTAAACTAAAGT
TGAACCTCTGGGCTTTTACGTTCCTACAAGTCTAGTTTGAGCACATGTAA
CGATATAAACTTAGATTCATAAAATGGAATTGCGTCTACACTAGTGACTC
TATACCAGAACATACAAATCaaataaagttttcaaaagaatgACTGGAGC
AAAGTTTAAGATATTTTTTGGCTTCAAGGAGGATGTTTGTGCAGATCCTG
TTCTCTTGAATTGCTCTCAAAGAATCGTGGTAAGAAGAACTCCTGATGAA
ATTTCTATTGGGCCGCTCTACATTCATGACTTTTTTACCTTTCCCATGTC
TAACATTCAGGCGATTAATTTTTCACCAAACGTGCTCTCCTAAATATGTT
TTGGAGCattgtttttcaaacttactttTCCTCCTTCAAACGTTAAACTT
CTGAATTTCATTGGTCGAAAATATTTAACAGTGTTAGAAGTTGCTTCTTT
TGCGAACGAAAGATCCAAGCTCTTCGCTTTTATTCTCAACGTATTTCAAC
TCGTTTGTGTGCAATTTTAAACGAAGCATGGCATCGTCGTTGCTAGGGAA
CATTATATCACGTGCTTACACATTCGTTACCATTCTCCTACAGGAAGAAG
AAGAGCCTCTGCCTCCGCATCCGCTACAACATCAAATCTCCAATGGAGGG
GGCGGAGAGCGCCTCGCCTCACCCACCAGCACCATCGCTCCACCCAATGA
TTTATCACCGCCCCCTTCGACTTCAAGTAACAAAGCTGCCTCCCCGATGA
TGCCGAAAAAACTTTTAGGATCGGAAAGCAAAAGCGGTGGCTTCAAAGGT
TTCAGTCGCCGACTGTCGAAACGAGGTACAGTAAACTTATTACTTATtac
ttattcgaacttctaccGTATTATTTGTCCCCAGTCCCCGTCACGGAGAA
ATCCTCCTAATAtgctttttataattcgaatccctctataattcgaacaa
ataatatTCCCCGTTccagttcgaattagcgaggtacttctttcttattt
tcctttttgtgcaTCGGAGTTTTTAAATCGGGGATTTCACAAGGGTGcgg
aaatcaaaatttttagaatatctGCCTGTTTGACAAGGAATTTTCCAGTA
ATGATTGCACAGTGTAGCAAATAtgatttcatttcttttgaCATCAGTTA
CGGGAGGTACCGACGAGGAGAAAGATAAAACGAGGATCAAAGACAAgctg
aaaaaatatttatccaaaCGACCTTCGTTCAACGAACTCGAAAGTAAAGG
AATTATCGCAGGTAGGAATCATGTGAAGATCCTGTCTGTCtgcctgtctg
tctgtctgtcttgTTTGCTGGTCTACATGTAGTGACATTAAGGAGACTTT
ATTTGAGAGTTCTTTTTAGCGATAAATCTCTGTAAACTTTCTTGTAGCTG
ACTTCTAAATTTGATGGTATGCCATTATCTTGCTGTTTCtgagctctagt
ttagacggccctcTTTTAaggtcaatgcaatgtcttttttcaatcttttc
caagcaaagattttaactgccaactttgtgcccactttGTGCCTACTCTA
ATAATTAGAATAGGCtaggcagaaagtcggccgtctaaactagagctgaG
ATTTTTTACtcttatatttttcagattttgttttTGGCTATCCGCTCGAG
AAACTTTGCGAACGTGAAGATAATTTGGTACCTCGATTCATTGTTCAAAT
TGTTCATGAGGTCGAAAAGAGAGGTCAGTGAAAAAAAAgctttcagattt
ttcaaaagctCACCTATTAAGTAAAGAGTCAGGAGAGTTGAACCTTTCAT
CAATAAAGTGTATTATCAAAGGAAATAGTCcctcaaatttttccaaaaga
attaGTCCAAAACTGAGAGAACTGTTGTTCCTACATACAAATTAAAAGGA
GCAAAATTGAAGTGATGAATTTGTATCATTATCATTTGTTTGTTAACAGG
ACTTGATGTGGATGGCATATATCGTGTCTCTGGTAATTTATCGTCAGTCA
ATAAACTACGTGGACTAATCGACAATGGTATGCTTAAatcatttcttttt
tattattggATAACTTACTCCGGTGGGTTCATTGGAAGATATGCATTCTT
AGAATCTTTTGCTAGAACCCTTTGTTTTGCATAATGTGGAAGCGTGGAAA
AACTCAGTGCTACTGACAGCGCAAGATCTTTGGCCTGATTCGgcaataca
gttgactcttCATGAATCAAACACGCACGGAGAACACAAGTTTGATCGAG
TAATGGAAATGTTGAGTTATGGAGTAACTTAtataagacattgttaactg
aagggaccggAAAACGTGTCCAAGTTATTGAGACCCGatttaaagagact
ccactctAGTGCcaaataccgagtttatgtatgtgtgttttctgCAAcag
agacggtaaggttctaatttgactagatcctgaccagctgaggacgacgg
tgaatcagcacttttaccgtcctcgatattgcgggtcagaactgcgggtt
attccaaatcgcttcagtgactttaccgtcctcaaaagtgcaaatacata
aactcgctaatgtgtGTAGCGGTAACGTTACCAAATTCTTGACATTCTAt
tgctcttctttttttttgaaggtGAGATGCCGGACTACTCTCAACCAGAA
TGGAATGACATTCACTTACTGACTGGttgtttgaaattgtatttTCGCGA
ACTCCCCGAACCTCTTCTACCCTTTCACCTGTTCGATCGATTTGTTGGTG
CTATGAGTAAGTCACCGACCTTTTCTGTTCACCAAACTATAGTCCTTCCA
AACAAATAGAAGCTCAGAGATGAGGTTGTCCCTAATTAGTTggaaatata
aatttctaccatgtaacacccctgtctcagtgccccggtggtaccttttc
cctcagtggggatgaaaacttctatcgaaatcccaatggggatagaaaat
ctattgtttccagctcgaaaatttcagtggggatggttttggagtccaat
tttttccattcaattttcaatggggatagaatcatAGGGCAATTTCCCAG
TTGGGTTGAAAATGTAGGCTATTTTTTCCACTGgagacgattttttggcc
tatttttccaccggggcgggggtccaccgggtctgtgacacaggggtgtc
atgTAAAAAGAGTGCAGGAACTTACAGGACTTTTCATATcgatttctttc
tttgtttagaaAGCCCTTTCAAGCCTGAGAAGCTGAAACTGATGAGGGAA
GTCGTCTCAGAGCTAAAAGCTGAACGCAAAGAGACTTTAAATCTGCTACT
CACGCATTTTAACAGGTAGTGTATATTATGCTGAAGAGGTCTGTTGTGAA
GGCATTAAATGTTGAAATGGACACGTAAAGCTAGCATTTCATTGGTTCTA
AACAAGCAACCGTAGCTTGAAGGTAGAGCATCTGGCTACGGTGTGCAAGG
TCTTAGGTTCAAACCCTgaccgggtcataccaaagacttcttaaaaatgg
tacttgatgcctctctgcttgatgctcagcaattaagggaaggatcaagg
gtaagtggaggaatccagagagaaagagtggcgccctcccctactttcgg
gtagacagctatcgaaagagaagccttcagggtcgcctccgactgcggtc
gcagattTACTTACTACTAAACAAGcgaaatgttttattttcaatctcTA
ATCTCGTGTTTAAATTTAGCCCTATCGTTGTGGAATATTAATTGAATTTG
TTGTTTTTCCAGGGTGATGTCTATGTCTTCGAAGAATCGAATGCATTCAC
AAAACATTGCTATTGTTTTCGGACCGACGCTGATGTGGCCTGAAACGGAC
TCTATAAATGTTGCTATGACGAcggtttttcaaaatcaagtcATTGAATT
TCTTGTGCAAGAGTGGAACGATGTTTATACGATGTAACACAAATTGCTTG
GTGCTAATGAAATGGTTTTGTTACGAATTACTTCGTTTGTTTTAAAGTGA
GGCTAATTTGTATGGGAGTGAGGCTGAGTTGTTTATTTCAGATGAATGGT
TCCTGAAGACTTCCGAGGTCTTGTGTATGCCAACGAACTGGTTTGCCACC
GAACCTGGATCTTAATCAGTTAGAGTATTGACACAACTGGACATCATTTt
ccccccaataattttggGTGTGGTCTATGACAACGTGTGAATGACATCAA
TGCGAACATTTCTGGTGCAGGTGACAGAACCTTGCTGCAACTGCTAGATG
CTTGCCTTGTTCAATAAATAATGAATAAATGTTGTATTGATTTCGCTTTT
CCAATAACACAATAACTCGCTCACCAACAGCCTGAGTTTGATTTCTCACT
GTTTTTAAGAACGGTCGATGAAGTGACAGAAAAATGAtgactttcaaaaa
acaatgataaagaaTGAATGAtgttgaatgaatgaatgaatgaaaataaT
ACAGCAAGTTTAGAATTTGATAATTAAAGAAatagcaataatttcaaaat
ttttaatataaCGTCTATATAAATATGTCTAGAATTTttagttaattttt
ttattactacTGATGGTCGGTTTTTGCTACATGTGAATTTATTATATTAT
TGTTATTGATGGATTTATATGAAAATTATCTTGTCCAATGTTTTTAGGGG
AGGGCACCTGTTTTTCTGAGATGTTCCTTTTTTTCTGCGTTTTAAGttac
ttttttatgttttttaaggTTTATTTATTACTGTCACTTTCGCCAACCGA
TACCTACAGCGTTTCAAAAGAAGCCTGTGTTTTCTCGTTGATTTCCTCTG
TACAAAGTcaactgttttcaaattttaaacttttttttttcgttcagttc
tttttttttttgttcgttctCTTATTGgacatttttttatgtttttttgt
actttttgctATTTGTTATTTCACAACGACATAATTcaatttcgaaaata
atttgTTCAATCATAGACAAGGACAACAAATAATTCATTATAAAAGTAGT
CCTGAAACCATTTGTTTTAGGTGTGCACTAGTTTTTGTTATCCCTGCTAC
TTTTGAACAAATGTTTTAATGtaatcttaaaaagttataaacctttgaaa
aacctttgaaaagataattcagaggtCTTTAACTGACAAAAGATGATgat
aaatttgcgaaaaaacagagaagaaaaagaatttaatATCCCTTGATTCT
AGAAACTTTATTTTTGGTACTAAATTACTTTGAAGCCCTGATTTCaacta
aataattatttttccctGCATTATTGCATCTAAAGTTGCAGCCTTCAACG
AGCTACCTTTTGGAGACtgtaatttttgaaacattcattcaaaaatggca
agcaaaacaaGGATAAGTGCAAACTTAAAAGCGAATTGACtctagttttt
aatttttgttggaatgatctttttgattttatctGCTACCAGTGATCGAA
TTTCCTATTATGTAATATACTTAAATCATCCGACTACCAGTCGTCTACTA
CTAAACTTGAAACTAAAACTGTGTAAATTTTCTTGCTTTTGCTTAATATC
AAattgtttttgtataaaaaagatATAATTATCAAACCTAACCATTTGTT
ACGTCGTTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_038839XLOC_038839Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00061954-exon-scaffold_361-1491911889:1653823..1653896TCONS_00061954-exon-scaffold_361-1491911889:1653823..1653896Clytia hemisphaericaexon
TCONS_00061954-exon-scaffold_361-1510915933:1653823..1653896TCONS_00061954-exon-scaffold_361-1510915933:1653823..1653896Clytia hemisphaericaexon
TCONS_00061954-exon-scaffold_361-1575043694:1653823..1653896TCONS_00061954-exon-scaffold_361-1575043694:1653823..1653896Clytia hemisphaericaexon
TCONS_00061954-exon-scaffold_361-1491911889:1655766..1655997TCONS_00061954-exon-scaffold_361-1491911889:1655766..1655997Clytia hemisphaericaexon
TCONS_00061954-exon-scaffold_361-1510915933:1655766..1655997TCONS_00061954-exon-scaffold_361-1510915933:1655766..1655997Clytia hemisphaericaexon
TCONS_00061954-exon-scaffold_361-1575043694:1655766..1655997TCONS_00061954-exon-scaffold_361-1575043694:1655766..1655997Clytia hemisphaericaexon
TCONS_00061954-exon-scaffold_361-1491911889:1656320..1656433TCONS_00061954-exon-scaffold_361-1491911889:1656320..1656433Clytia hemisphaericaexon
TCONS_00061954-exon-scaffold_361-1510915933:1656320..1656433TCONS_00061954-exon-scaffold_361-1510915933:1656320..1656433Clytia hemisphaericaexon
TCONS_00061954-exon-scaffold_361-1575043694:1656320..1656433TCONS_00061954-exon-scaffold_361-1575043694:1656320..1656433Clytia hemisphaericaexon
TCONS_00061954-exon-scaffold_361-1491911889:1656797..1656895TCONS_00061954-exon-scaffold_361-1491911889:1656797..1656895Clytia hemisphaericaexon
TCONS_00061954-exon-scaffold_361-1510915933:1656797..1656895TCONS_00061954-exon-scaffold_361-1510915933:1656797..1656895Clytia hemisphaericaexon
TCONS_00061954-exon-scaffold_361-1575043694:1656797..1656895TCONS_00061954-exon-scaffold_361-1575043694:1656797..1656895Clytia hemisphaericaexon
TCONS_00061954-exon-scaffold_361-1491911889:1657122..1657199TCONS_00061954-exon-scaffold_361-1491911889:1657122..1657199Clytia hemisphaericaexon
TCONS_00061954-exon-scaffold_361-1510915933:1657122..1657199TCONS_00061954-exon-scaffold_361-1510915933:1657122..1657199Clytia hemisphaericaexon
TCONS_00061954-exon-scaffold_361-1575043694:1657122..1657199TCONS_00061954-exon-scaffold_361-1575043694:1657122..1657199Clytia hemisphaericaexon
TCONS_00061954-exon-scaffold_361-1491911889:1657794..1657928TCONS_00061954-exon-scaffold_361-1491911889:1657794..1657928Clytia hemisphaericaexon
TCONS_00061954-exon-scaffold_361-1510915933:1657794..1657928TCONS_00061954-exon-scaffold_361-1510915933:1657794..1657928Clytia hemisphaericaexon
TCONS_00061954-exon-scaffold_361-1575043694:1657794..1657928TCONS_00061954-exon-scaffold_361-1575043694:1657794..1657928Clytia hemisphaericaexon
TCONS_00061954-exon-scaffold_361-1491911889:1658382..1658487TCONS_00061954-exon-scaffold_361-1491911889:1658382..1658487Clytia hemisphaericaexon
TCONS_00061954-exon-scaffold_361-1510915933:1658382..1658487TCONS_00061954-exon-scaffold_361-1510915933:1658382..1658487Clytia hemisphaericaexon
TCONS_00061954-exon-scaffold_361-1575043694:1658382..1658487TCONS_00061954-exon-scaffold_361-1575043694:1658382..1658487Clytia hemisphaericaexon
TCONS_00061954-exon-scaffold_361-1491911889:1658935..1660781TCONS_00061954-exon-scaffold_361-1491911889:1658935..1660781Clytia hemisphaericaexon
TCONS_00061954-exon-scaffold_361-1510915933:1658935..1660781TCONS_00061954-exon-scaffold_361-1510915933:1658935..1660781Clytia hemisphaericaexon
TCONS_00061954-exon-scaffold_361-1575043694:1658935..1660781TCONS_00061954-exon-scaffold_361-1575043694:1658935..1660781Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_361supercontigscaffold_361:1653823..1660781 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.23788e-06	0	0	0.123899	0	0	0	0	0.718994	1.22764	1.06426	0.28801	1.50238	1.55601	2.48598	1.70915	0.889102	0.60829	5.38068	6.0875	1.16208	1.55066	0.873645	0	0	0	6.76647e-06	2.51139	1.08168	0
Blast
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BLAST of TCONS_00061954 vs. Swiss-Prot (Human)
Match: RHG27 (Rho GTPase-activating protein 27 OS=Homo sapiens GN=ARHGAP27 PE=1 SV=3)

HSP 1 Score: 200.675 bits (509), Expect = 1.756e-53
Identity = 99/213 (46.48%), Postives = 142/213 (66.67%), Query Frame = 3 
Query:  366 YLSKRPSFNELESKGIIADFVFGYPLEKLCEREDNLVPRFIVQIVHEVEKRGLDVDGIYRVSGNLSSVNKLRGLIDNGEMPDYSQPEWNDIHLLTGCLKLYFRXXXXXXXXFHLFDRFVGAMKSPFKPEKLKLMREVVSELKAERKETLNLLLTHFNRVMSMSSKNRMHSQNIAIVFGPTLMWPETDSINVAMTTVFQNQVIEFLVQEWNDVY 1004
            +L +RP+   L  KG I D VFG  L  LCERE + VPRF+ Q +  VE RGLD+DG+YR+SGNL+++ KLR  +D+ E  D     W D+H++TG LKL+FRELPEPL PF  F +F+ A+K   +  + + +R++V  L A   +TL +L  H  RV+    +NRM  Q++AIVFGPTL+ PE +  ++ MT VFQNQV+E ++Q+  D++
Sbjct:  674 FLQRRPTLQSLREKGYIKDQVFGCALAALCERERSRVPRFVQQCIRAVEARGLDIDGLYRISGNLATIQKLRYKVDHDERLDLDDGRWEDVHVITGALKLFFRELPEPLFPFSHFRQFIAAIKLQDQARRSRCVRDLVRSLPAPNHDTLRMLFQHLCRVIEHGEQNRMSVQSVAIVFGPTLLRPEVEETSMPMTMVFQNQVVELILQQCADIF 886
The following BLAST results are available for this feature:
BLAST of TCONS_00061954 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RHG271.756e-5346.48Rho GTPase-activating protein 27 OS=Homo sapiens G... [more]
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