TCONS_00061861 (transcript) - C. hemisphaerica

Overview
NameTCONS_00061861
Unique NameTCONS_00061861
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2751

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00061861 ID=TCONS_00061861|Name=TCONS_00061861|organism=Clytia hemisphaerica|type=transcript|length=2751bp
ctttttatctttttttttaatttttgatataaGAGATAAGAAATGATCAT
ATTTTGATGCCTTATATTCTTTGTTTGATGACTTGATACTTCAGACTTCT
AAGCAAAAGCAAATAAAGGTAACAGCAAAATTAGAAGAATATAAATAATG
TAAAATTTCCTTTATCTAAGTAAATAACCAAAAATCTCAGTGTCAAAGAT
GGACGATAAAAAAACTATTGGTATTGTTGATTATGTGATATTTGGAGCTC
TGCTTCTATCATCCAGTTTGGTTGGCATATATTTTGGTTACAAACACAGG
AAAAGAGTGACATCGGCAGAATATTTACTGGCTAACAAGAGTATGTCATG
GTTCACAATTTGTATATCCTTGGTTGTGTCTTTTTTCTCTTCAGTTGGTG
TGATGGGAATCACCACTAACATATACATGACTGGTGTCACTTTTTCTCTT
CACATTTTGACCTTTCTGGTGCCTATTATTCTGAATGCAGAATTTTTCGC
ACCTATTTTCAGAAGATTGGAGCTGATCAGTGTAAATCATtatTTGGAAT
TGAGGTTCTCTAGAGGAGTTCGCTTTATCGGATGTTTCCTGTTCTTTCTG
CAGTATGTTATTTACCTGGCTATTGTGTTGTATGCTCCTAGTCTGGCATT
AGAAACAGTCGCAGATGTGCCTTTGATGGCAACCATCATCACCACTGGAC
TTGTTTGCACATTCTACACTACTCTGGGTGGAATGAGAGCGGTTATATGG
ACAGACGTCTTCCAATCAATGGTCATGGTCATTGGGCTGGGAACTAGTTT
GGTCATTGGTGTGATAAATATTGGTTCATTTGAAAAGATTTATAATGTAA
CATCAGAATTCAAAAGATTTGACATTGATATTAATCCTGATCCAAGAGGT
CATCAAACAGTATGGGGAGTCACCATTGGAGGGACTTTCTCTATCATGGC
TGCTTGGACGATTTCACAACCAACTATGCAGCGAGTCATTGCTGCCAGAA
GCCTGGGCGATGCAAAAAAAGCTCTTTATGGTGCATATGTTGGACTCTTG
TTGATTGGAGCATTCTTAACGACACTTGCTATTGTCATCTTTGCAACATA
TGCTGAGTGTGATCTATTGAAATCTGGAAAAATCAAGAGCCCTGATCAGG
TGCTTCCATATTACGTGGTTGATAATTTTTCACATATACCTGGTGTGACT
GGGGTATTCATCGCCTGTTTGTTCAGTTTCTCTATCAGtaCACTTTCATC
AGCTTTGAATTCATTGGCTGCAGTTTTCTTGGAAGACATTGTGAAATCGT
TCAACCCTGTTCTCAGTGAAACTTTCCAAACAAGAGTTTCAAAGATTGTT
GcCTGTGTTCTGGGTGTGGTAATAACAGGTCTTGCATTTGTTGTGCCATT
GATTGGTAACAGTATCATCAAACTTGTCATTCAACTCTTTGGTATCGTAA
GCGGACCTTATTTCGGATTGTTTGTCCTTGGCATATTCTTCAAGAAATCA
AACTCAGTTGGAGCAGGAGTTGGTTCTGTAATAGGACTCCTGGTAGGAAT
TGCAATGATGGTCGGTCAATGGTTCTATCCACCTGGCAAAAATCTACCAC
CTGTGTCAATGGCACAATGCACTAACGTCACCAAACctgatttgaaattt
atctATCCAGCAGATCCTGTTTATAAGGACAACATAATAGCAGACATGGT
CAGTTTCTCTTATATGTGGTTTGGCTTTATCACTGTCGTCCTTACCGTCT
TCATTGGATATTTGGTCAGCTTATGTCATGGACGTTGCAACAAGGAAGAG
TTTGTTGACAAGATTCTGTTGTATCGATACAGTGGATGTTGTGGATGTTG
CGGAGGATGTTGCAGCTGTTGTGATGGGGATGGAGAAACAAGCTATGAAC
CTTATgatcGTGAAGTTCAACTCATGATGATGAAAAAAGACCAAGAAATG
GAAGCCGAAGACGACAGAAGAAACGATGTTGTCATGTAAAGGCTGCACGA
AAATGCGGCTACGTTGATTTTGTGGTGTGGAGATTGCATCATTTTGGGTG
AAACTGTTGTGTTTAGTTTGAATTCCTCTTTGGTTAAAAGTGGAAGGAAC
ccaataaaatcaatcaaaaattatgTTACAATAATATTTTTAGTGTTAGG
AATAAAATGAAAACCATTTTCTGAGGTTTCAGCCAAGTAAAGTTGTATTG
AAATTATACTGTTGTTTAAGAAAGTCCAGTTGTGGCAAATAAGAATATGC
CACgtgaccaactttttttttaagtctACGTTGACTGAACTACATTTTCA
TAAAGTCATGATGACGCTACCTTTACTAGGTCTAGCAAGAGTTTATTTTG
ATTATGCTTAGGGGATAGCGTAGTGAAGgtgatttttatttcaaattttt
attttttagcttttaatagaaataattttagatattTGTTTAAGTTTCGC
AAAGGGGAGTATATTTTTGTCATCtttaatttttgaattattcATGCATT
GCTTTGTCTTTTCCACTGTATATTTTGTATACAAATGCTTTAGATTTCTA
TTCAAATGTTTTATGCTTAAAGTTTTATCGATTGTTTTGATACTACATag
aaatttttgtacaaaaatgtCTTGTTTATAACTTGTATATAAattttatc
tttgtttttgtAGGATTTCAACTCGCCAATTATTATAAATTTCACTTTAA
AACATTGTGTTATTTTAAACAGCAACAAAACCACTCAAGAAACTTGTCCT
A
Run BLAST on NCBI

transcript from alignment at scaffold_361:249345..256941+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00061861 ID=TCONS_00061861|Name=TCONS_00061861|organism=Clytia hemisphaerica|type=transcript|length=7597bp|location=Sequence derived from alignment at scaffold_361:249345..256941+ (Clytia hemisphaerica)
ctttttatctttttttttaatttttgatataaGAGATAAGAAATGATCAT ATTTTGATGCCTTATATTCTTTGTTTGATGACTTGATACTTCAGACTTCT AAGCAAAAGCAAATAAAGGTAACAGCAAAATTAGAAGAATATAAATAATG TAAAATTTCCTTTATCTAAGTAAATAACCAAAAATCTCAGTGTCAAAGAT GGACGATAAAAAAACTATTGGTATTGTTGATTATGTGATATTTGGAGCTC TGCTTCTATCATCCAGTTTGGTTGGCATATATTTTGGTTACAAACACAGG AAAAGAGTGACATCGGCAGAATATTTACTGGCTAACAAGAGTATGTCATG GTTCACAATTTGTATATCCTTGGTTGTGTCTTTTTTCTCTTCAGTTGGTG TGATGGGAATCACCACTAACATATACATGACTGGTGTCACTTTTTCTCTT CACATTTTGACCTTTCTGGTGCCTATTATTCTGAATGCAGAATTTTTCGC ACCTATTTTCAGAAGATTGGAGCTGATCAGTGTAAATCATGTAAGATATT ATTAACTCTTAAACAAAATACCATGCATTTTGACCTACTTTTTTGTAAGT TGAGATTATATTTAgtttatttcaatttaaaaaatgtatgAGCAAATCAC AAGGATGGGGTTAAACTTAAAACCTTAGAAAGTGCTAGGAATTCATCTAG GTGGGAAATCATTCATTGCCAGGTGTGAATTCCCACCAGTGTTTGTTAAA TTTTTCCTGTGCTGAATGAGTTTAAATGTCCTaaatttatgttgtttttt aaaGTTCTTGAGGCTAATTTActaagttattatttttttcttttcagtat TTGGAATTGAGGTTCTCTAGAGGAGTTCGCTTTATCGGATGTTTCCTGTT CTTTCTGCAGTATGTAAGTGAAGTTCTTAATTAGACACAGACTTTGAGTC TCCTGCTACACCAAATTAAAACTGACTAATTGCCAGCAAAAACGACCAGC TTGTTGCTGGACAGACTTTGAAGTCCTTTTAAGTCCTTTTAAATCCTTAG CTTTTGTCAGCTTCATTTTTTGtatgattttaattttataGGTTATTTAC CTGGCTATTGTGTTGTATGCTCCTAGTCTGGCATTAGAAACAGGTAAATT TGTTGCTAGACAATTGTAAGAACAATTTAGTGGGTCTCAAAAGGTCTCCA CCAGATATTTTGATACTTTCAAGCCAAGCATGCAAAATTTATAaccaaag aaaaaattgaaaaactggCAGTAATAAGttgtagaaatagaaatagaaat agaaattagCAAGAATTATATTCGTAAGTTGAATTTAGATTCAAAGTGTA ATATTTTGATGTCGTTTTGTTTACAGTCGCAGATGTGCCTTTGATGGCAA CCATCATCACCACTGGACTTGTTTGCACATTCTACACTACTCTGGTAAGc tcatttcatttttcaatctacTGAATTATTTATTTACCACAAAAAAATAT CCTCTGCCATACACTTAACCAACtacttttttaactttaatttaTTAACT GAAAAATTGCTTTCTTCAATTTACGATAACATAAGAAATTTGACCAAACA AATAATATTAAGCTAGATTAAAAATTATCAGGAAAAGATATCTTTCAATC CATCAagcaaaactgaaaaaattttaaaatgagtacataactcagagttt catgttTCCACATTTATCAAATGGTGTGAGAATGTTGTTTTTTGTTAacg tcaatttttcaattttacagtCATATATTTCTTGTTGTACATTTGATAAA TGTGGAAACATGAAATCTGAGTTATGTactcattttaaaatttttagttt tgtttgatGGATTGAAAGATAACTTTTCCTGATAAATACATTGGCTCTGG TTACCCATCGAGCAATCCAACATCATTGATTCGCCTAACCTAAATTAgat taaaaattattaaaacccGACACAATAAGAAATGATATTGCTATCTTACA GGGTGGAATGAGAGCGGTTATATGGACAGACGTCTTCCAATCAATGGTCA TGGTCATTGGGCTGGGAACTAGTTTGGTCATTGGTGTGATAAATATTGGT TCATTTGAAAAGATTTATAATGTAACATCAGAATTCAAAAGATTTGACAT TGAGTAAGTACGGATTAAAAAAATCTTCCTTTTAGAATCGAAGGAGTATC TCTGATCTTTCTCATACACATGTGGTTATGTAAATTATGCAAATCAAAAC GTGTGTGTATTCTctgtcataatattttgatttattttattaCTTGCAGT ATTAATCCTGATCCAAGAGGTCATCAAACAGTATGGGGAGTCACCATTGG AGGGACTTTCTCTATCATGGCTGCTTGGACGATTTCACAACCAACTATGC AGCGAGTCATTGCTGCCAGAAGCCTGGGCGATGCAAAAAAGtatgaagaa tttttttaaagcgaAGTATTTTTTGCATGCTTTTTCTTAtggatttatgt aaaaacaatcaaaacaactATCTGCTGTTAAAATCAAAGTGACTTCTTTC ACTATTCTCTAGAGCTCTTTATGGTGCATATGTTGGACTCTTGTTGATTG GAGCATTCTTAACGACACTTGCTATTGTCATCTTTGCAACATATGCTGAG TGTGATCTATTGAAATCTGGAAAAATCAAGAGCCCTGATCAGGTAGATAT ATAGATTTTTAAATGTTGTTTGTCATAAAGTTGTTATATCCAAGAACCTN AACATCATTGATTCGCCTAACCTAAATTAgattaaaaattattaaaaccc GACACAATAAGAAATGATATTGCTATCTTACAGGGTGGAATGAGAGCGGT TATATGGACAGACGTCTTCCAATCAATGGTCATGGTCATTGGGCTGGGAA CTAGTTTGGTCATTGGTGTGATAAATATTGGTTCATTTGAAAAGATTTAT AATGTAACATCAGAATTCAAAAGATTTGACATTGAGTAAGTACGGATTAA AAAAATCTTCCTTTTAGAATCGAAGGAGTATCTCTGATCTTTCTCATACA CATGTGGTTATGTAAATTATGCAAATCAAAACGTGTGTGTATTCTctgtc ataatattttgatttattttattaCTTGCAGTATTAATCCTGATCCAAGA GGTCATCAAACAGTATGGGGAGTCACCATTGGAGGGACTTTCTCTATCAT GGCTGCTTGGACGATTTCACAACCAACTATGCAGCGAGTCATTGCTGCCA GAAGCCTGGGCGATGCAAAAAAGtatgaagaatttttttaaagcgaCGTA TTTTTTGCATGCTTTTTCTTAtggatttatttaaaaacaatcgAAACAAC CATCTGCTGTTAAAATCAAAGTGACTTCTTTCACTATTCTCCAGAGCTCT TTATGGTGCATATGTTGGACTCTTGTTGATTGGAGCATTCTTAACGACAC TTGCTATTGTCATCTTTGCAACATATGCTGAGTGTGATCTATTGAAATCT GGAAAAATCAAGAGCCCTGATCAGGTAGATATATAGATTTTTAAATGTTG TTTGTCATAAAGTTGTTATATCCAAGAACCGTGCCGTCCCTTAGAACTGC CAGTATAATATgagattcttttgtaaaaattttttccATCAAATTTGCTT CCAGCCCCTTTTTTCTACAAGTCAATATTTTGCTATCTATTGATTTAGGT GCTTCCATATTACGTGGTTGATAATTTTTCACATATACCTGGTGTGACTG GGGTATTCATCGCCTGTTTGTTCAGTTTCTCTATCAGGTAAAACTTACTA TTGTTATAAAactacattaaaaaaaaatttataatcaGGCATAGAAACCA TAGCGTCTGCCCACTGAAAAAGGAAAGGGTTGaaaaataccgggtgaccc acgaaaaagttcagacgtttcccgacatcttgaggccgaacaaatgtccc aaagtgcttggagttttgatatttagaaagtagaTAtcttaacttaaaat ttgagctatcaccttttaaatttgaccaacttgttctctacttatgagct tttaaagtcaaaattcacttttcggtaagtgtaaaaaacacgtaaaaaag aggtattaaattttatgcaatcaattagaaatccacttacaaattgactt atttaacgagttttatgacattaataattaataaaaacgactttcaaagt aatttttgtttaaaacaagactagtttttataaaaattggcgcttttgta gatttttcatatttttttcaaaaactgtatatccaaaacgtctaaaaata ccaaattttataccccttttttacatgttttttacactttccgaaaagtg aattttgactttaacaGCTCATAAAaagtagagaacaaattggtcataag tttaaaaatcaaatttaattttaaacaaaacattttagTTTAATCTTGTT GTCTTGTCATTCCATCAAGTTGGACTTTGATGATACTTTACTCctgtatt attttttttagtaCACTTTCATCAGCTTTGAATTCATTGGCTGCAGTTTT CTTGGAAGACATTGTGAAATCGTTCAACCCTGTTCTCAGTGAAACTTTCC AAACAAGAGTTTCAAAGATTGTTGGTAAAACaagcattattttttattaa ttttgtatGTCTTTTTTACAATGAAACAATGGCCTTACTCAGGatgtcta cgggaccttgaaaaccttgaaaaccttgaaattggactaagcaaccttga aaaccttgaaatttaATGTAATGGGAAAGaattccttgaaaaccttgaaa atgcatGATTGTGACAGTATAGTTGTCTTGTTTTGGCTTGGGTTCTCACT AAAGTTTCGGTCTATGCTAAAAACTCTAAGAATTTTCTTGCTTGCTTCGC TCGCAATCATTGTTTCTAGACCAAATACTGGTAGTAACATCTCTTGCACC TTGTCAACAAGTCATATCCTACTATTTAAGTCGATTTGAGTTCTGAAAAA CCTTCAAAATACTCAATAACTGGtccaaaaaccttgaaaaaacactaaaa ttttgccaaaaaaaccttgaaaaccttgaaaatggcGACAAAAATTCTGT AGAGACCCTGTACTTCTTACTCATTAAAACCATAATACAACTTGAGTatg taattttttgtttcttttcagcCTGTGTTCTGGGTGTGGTAATAACAGGT CTTGCATTTGTTGTGCCATTGATTGGTAACAGTATCATCAAAGTAAGTAT TGATGTTTTTAATAAGGTCTTCAAACTAAATGAAGGATATTTTAAATGAA TGTCTCTCAACCTTAGTCGGGAATCTTAGTTGCTTTGTCAGCAAAAATCT TCAATGCTTTTAATTTCAAAGACTTTATCTACCAAGGAAGTTATTTGCAT TAAGgtttcttgagattttaagcACTTGATATTATGTTATACCTTTAATG CCCAGCCATTATTTCTCTCATATTTTTCAGCTTGTCATTCAACTCTTTGG TATCGTAAGCGGACCTTATTTCGGATTGTTTGTCCTTGGCATATTCTTCA AGAAATCAAACTCAGTTGTAAGCTGCTGTGGTTTTTTCTTCTAAATAGTT TTGTTCTACATATAGTTATTTAGCAATGCAACAGAAtgcaatttaaaaga aaagtttaACAAAGCTTCCAGATTCGACCAACTTGTAGAAAGAAAGGGCT TGGTATCTATACTCTTAAATCAAACCAGTACAATGGTAATAAACGTTATT TTTAGCAGGTTGATAGGTAATCCAAACTCATATCGACTACATTTTACATT TGTTCAACTTTCTAAACAGGGAGCAGGAGTTGGTTCTGTAATAGGACTCC TGGTAGGAATTGCAATGATGGTCGGTCAATGGTTCTATCCACCTGGCAAA AATCTACCACCTGTGTCAATGGCACAATGCACTAACGTCACCAAACctga tttgaaatttatctATCCAGCAGATCCTGTTTATAAGGAGTAATTATTCG AACTGTTCCCTGAAAGTTTGTCAATGTTGAAAATATTGCTTACACTGCCC AACTAGTGCTAGAATCTATAGTCTCTTTAGTCATTGGTTGTGGTATACAC GAgtgttttctgaatttttttctaaattcttgtttatatttttctcaaat ttctaaaatGGTCTTTTACCTGTGATATTGTGTTATATTTCAGCCTTTGT AGTTAAGGTCTTCTCTCAGTTTACTCTATCAATGTAAATAATacctaatt ttcttcttttaaattAATAGCAACATAATAGCAGACATGGTCAGTTTCTC TTATATGTGGTTTGGCTTTATCACTGTCGTCCTTACCGTCTTCATTGGAT ATTTGGTCAGCTTATGTCATGGACGTTGCAACAAGGAAGAGTTTGTTGAC AAGATTCTGTTGTATCGATACAGTGGATGTTGTGGATGTTGCGGAGGATG TTGCAGCTGTTGTGATGGGGATGGAGAAACAAGCTATGAACCTTATGTAA GTCTCGGTAAAAGAAACCGAAAATCAgagttaaattattttttttaaaga aatttcgtAGCAAAATCTTGACCTTATCTTATCTgcaatctgccaaatta aattgtCACTTTTTGGTCATCTAAAAGATTCAATTCTCGCCAAAGTTAAA TATATTATTCACTCAAAAATTTACGACGAAGATATGAGGTTTCAATGTTT TGCCACAATGTTGTCACAGCAATTATTGTtacagttttttttcattttca ggatcGTGAAGTTCAACTCATGATGATGAAAAAAGACCAAGAAATGGAAG CCGAAGACGACAGAAGAAACGATGTTGTCATGTAAAGGCTGCACGAAAAT GCGGCTACGTTGATTTTGTGGTGTGGAGATTGCATCATTTTGGGTGAAAC TGTTGTGTTTAGTTTGAATTCCTCTTTGGTTAAAAGTGGAAGGAACccaa taaaatcaatcaaaaattatgTTACAATAATATTTTTAGTGTTAGGAATA AAATGAAAACCATTTTCTGAGGTTTCAGCCAAGTAAAGTTGTATTGAAAT TATACTGTTGTTTAAGAAAGTCCAGTTGTGGCAAATAAGAATATGCCACg tgaccaactttttttttaagtctACGTTGACTGAACTACATTTTCATAAA GTCATGATGACGCTACCTTTACTAGGTCTAGCAAGAGTTTATTTTGATTA TGCTTAGGGGATAGCGTAGTGAAGgtgatttttatttcaaatttttattt tttagcttttaatagaaataattttagatattTGTTTAAGTTTCGCAAAG GGGAGTATATTTTTGTCATCtttaatttttgaattattcATGCATTGCTT TGTCTTTTCCACTGTATATTTTGTATACAAATGCTTTAGATTTCTATTCA AATGTTTTATGCTTAAAGTTTTATCGATTGTTTTGATACTACATagaaat ttttgtacaaaaatgtCTTGTTTATAACTTGTATATAAattttatctttg tttttgtAGGATTTCAACTCGCCAATTATTATAAATTTCACTTTAAAACA TTGTGTTATTTTAAACAGCAACAAAACCACTCAAGAAACTTGTCCTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_038803XLOC_038803Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00061861-exon-scaffold_361-1491911889:249345..249884TCONS_00061861-exon-scaffold_361-1491911889:249345..249884Clytia hemisphaericaexon
TCONS_00061861-exon-scaffold_361-1510915933:249345..249884TCONS_00061861-exon-scaffold_361-1510915933:249345..249884Clytia hemisphaericaexon
TCONS_00061861-exon-scaffold_361-1575043694:249345..249884TCONS_00061861-exon-scaffold_361-1575043694:249345..249884Clytia hemisphaericaexon
TCONS_00061861-exon-scaffold_361-1491911889:250192..250257TCONS_00061861-exon-scaffold_361-1491911889:250192..250257Clytia hemisphaericaexon
TCONS_00061861-exon-scaffold_361-1510915933:250192..250257TCONS_00061861-exon-scaffold_361-1510915933:250192..250257Clytia hemisphaericaexon
TCONS_00061861-exon-scaffold_361-1575043694:250192..250257TCONS_00061861-exon-scaffold_361-1575043694:250192..250257Clytia hemisphaericaexon
TCONS_00061861-exon-scaffold_361-1491911889:250436..250487TCONS_00061861-exon-scaffold_361-1491911889:250436..250487Clytia hemisphaericaexon
TCONS_00061861-exon-scaffold_361-1510915933:250436..250487TCONS_00061861-exon-scaffold_361-1510915933:250436..250487Clytia hemisphaericaexon
TCONS_00061861-exon-scaffold_361-1575043694:250436..250487TCONS_00061861-exon-scaffold_361-1575043694:250436..250487Clytia hemisphaericaexon
TCONS_00061861-exon-scaffold_361-1491911889:250721..250788TCONS_00061861-exon-scaffold_361-1491911889:250721..250788Clytia hemisphaericaexon
TCONS_00061861-exon-scaffold_361-1510915933:250721..250788TCONS_00061861-exon-scaffold_361-1510915933:250721..250788Clytia hemisphaericaexon
TCONS_00061861-exon-scaffold_361-1575043694:250721..250788TCONS_00061861-exon-scaffold_361-1575043694:250721..250788Clytia hemisphaericaexon
TCONS_00061861-exon-scaffold_361-1491911889:251346..251497TCONS_00061861-exon-scaffold_361-1491911889:251346..251497Clytia hemisphaericaexon
TCONS_00061861-exon-scaffold_361-1510915933:251346..251497TCONS_00061861-exon-scaffold_361-1510915933:251346..251497Clytia hemisphaericaexon
TCONS_00061861-exon-scaffold_361-1575043694:251346..251497TCONS_00061861-exon-scaffold_361-1575043694:251346..251497Clytia hemisphaericaexon
TCONS_00061861-exon-scaffold_361-1491911889:251644..251784TCONS_00061861-exon-scaffold_361-1491911889:251644..251784Clytia hemisphaericaexon
TCONS_00061861-exon-scaffold_361-1510915933:251644..251784TCONS_00061861-exon-scaffold_361-1510915933:251644..251784Clytia hemisphaericaexon
TCONS_00061861-exon-scaffold_361-1575043694:251644..251784TCONS_00061861-exon-scaffold_361-1575043694:251644..251784Clytia hemisphaericaexon
TCONS_00061861-exon-scaffold_361-1491911889:251907..252036TCONS_00061861-exon-scaffold_361-1491911889:251907..252036Clytia hemisphaericaexon
TCONS_00061861-exon-scaffold_361-1510915933:251907..252036TCONS_00061861-exon-scaffold_361-1510915933:251907..252036Clytia hemisphaericaexon
TCONS_00061861-exon-scaffold_361-1575043694:251907..252036TCONS_00061861-exon-scaffold_361-1575043694:251907..252036Clytia hemisphaericaexon
TCONS_00061861-exon-scaffold_361-1491911889:253043..253131TCONS_00061861-exon-scaffold_361-1491911889:253043..253131Clytia hemisphaericaexon
TCONS_00061861-exon-scaffold_361-1510915933:253043..253131TCONS_00061861-exon-scaffold_361-1510915933:253043..253131Clytia hemisphaericaexon
TCONS_00061861-exon-scaffold_361-1575043694:253043..253131TCONS_00061861-exon-scaffold_361-1575043694:253043..253131Clytia hemisphaericaexon
TCONS_00061861-exon-scaffold_361-1491911889:253856..253968TCONS_00061861-exon-scaffold_361-1491911889:253856..253968Clytia hemisphaericaexon
TCONS_00061861-exon-scaffold_361-1510915933:253856..253968TCONS_00061861-exon-scaffold_361-1510915933:253856..253968Clytia hemisphaericaexon
TCONS_00061861-exon-scaffold_361-1575043694:253856..253968TCONS_00061861-exon-scaffold_361-1575043694:253856..253968Clytia hemisphaericaexon
TCONS_00061861-exon-scaffold_361-1491911889:254516..254586TCONS_00061861-exon-scaffold_361-1491911889:254516..254586Clytia hemisphaericaexon
TCONS_00061861-exon-scaffold_361-1510915933:254516..254586TCONS_00061861-exon-scaffold_361-1510915933:254516..254586Clytia hemisphaericaexon
TCONS_00061861-exon-scaffold_361-1575043694:254516..254586TCONS_00061861-exon-scaffold_361-1575043694:254516..254586Clytia hemisphaericaexon
TCONS_00061861-exon-scaffold_361-1491911889:254825..254911TCONS_00061861-exon-scaffold_361-1491911889:254825..254911Clytia hemisphaericaexon
TCONS_00061861-exon-scaffold_361-1510915933:254825..254911TCONS_00061861-exon-scaffold_361-1510915933:254825..254911Clytia hemisphaericaexon
TCONS_00061861-exon-scaffold_361-1575043694:254825..254911TCONS_00061861-exon-scaffold_361-1575043694:254825..254911Clytia hemisphaericaexon
TCONS_00061861-exon-scaffold_361-1491911889:255164..255333TCONS_00061861-exon-scaffold_361-1491911889:255164..255333Clytia hemisphaericaexon
TCONS_00061861-exon-scaffold_361-1510915933:255164..255333TCONS_00061861-exon-scaffold_361-1510915933:255164..255333Clytia hemisphaericaexon
TCONS_00061861-exon-scaffold_361-1575043694:255164..255333TCONS_00061861-exon-scaffold_361-1575043694:255164..255333Clytia hemisphaericaexon
TCONS_00061861-exon-scaffold_361-1491911889:255615..255840TCONS_00061861-exon-scaffold_361-1491911889:255615..255840Clytia hemisphaericaexon
TCONS_00061861-exon-scaffold_361-1510915933:255615..255840TCONS_00061861-exon-scaffold_361-1510915933:255615..255840Clytia hemisphaericaexon
TCONS_00061861-exon-scaffold_361-1575043694:255615..255840TCONS_00061861-exon-scaffold_361-1575043694:255615..255840Clytia hemisphaericaexon
TCONS_00061861-exon-scaffold_361-1491911889:256096..256941TCONS_00061861-exon-scaffold_361-1491911889:256096..256941Clytia hemisphaericaexon
TCONS_00061861-exon-scaffold_361-1510915933:256096..256941TCONS_00061861-exon-scaffold_361-1510915933:256096..256941Clytia hemisphaericaexon
TCONS_00061861-exon-scaffold_361-1575043694:256096..256941TCONS_00061861-exon-scaffold_361-1575043694:256096..256941Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_361supercontigscaffold_361:249345..256941 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.151614 0.147848 0.171665 0.203773 0.20446 0.646269 0.584772 1.45988 0 0 0 0 0.201668 0.209434 0 0 0 0.116658 0 0 0.146589 0.214503 0.695352 0 0 0.581115 0.62368 0 0.16828 0.171451
Blast
BLAST of TCONS_00061861 vs. Swiss-Prot (Human)
Match: SC5AC (Sodium-coupled monocarboxylate transporter 2 OS=Homo sapiens GN=SLC5A12 PE=2 SV=2)

HSP 1 Score: 297.745 bits (761), Expect = 1.502e-88
Identity = 188/536 (35.07%), Postives = 311/536 (58.02%), Query Frame = 1
Query:  205 DKKTIGIVDYVIFGALLLSSSLVGIYFGYKHRKRVTSAEYLLANKSMSWFTICIXXXXXXXXXXXXMGITTNIYMTGVTFSLHILTFLVPIILNAEFFAPIFRRLELISVNHYLELRFSRGVRFIGCFLFFLQYVIYLAIVLYAPSLALETVADVPLMATIITTGLVCTFYTTLGGMRAVIWTDVFQSMVMVIGLGTSLVIGVINIGSFEKIYNVTSEFKRFDI-DINPDPRGHQTVWGVTIGGTFSIMAAWTISQPTMQRVIAARSLGDAKKALYGAYVGLLLIGAFLTTLAIVIFATYAECDLLKSGKIKSPDQVLPYYVVDNFSHIPGVTGVFIACXXXXXXXXXXXXXXXXXXXXXEDIVKSFNPVLSETFQTRVSKIVACVLGVVITGLAFVVPLIGNSIIKLVIQLFGIVSGPYFGLFVLGIFFKKSNXXXXXXXXXXXXXXXXXMMVGQWFY--PPGKNLP-PVSMAQCTNVTKPDLKFIYPADPVYKDNIIADMVSFSYMWFGFITVVLTVFIGYLVSLCHGRCNKEE 1800
            + K   + DYV+F AL   SS +G++F  K RK+ TS E+L+  + MS+  + +SL  SF S+V V+G  + +Y  G +F +  + +L  I+L +E F P+F R  + S   YL+LRF++ VR+    ++ +Q ++Y  +V+YAP+LAL  V    L  ++  TG+VCTFY TLGG++AV+WTD FQ +VM++G  T L+ G  + G F  +   ++   R  I D + DP    T W +T+GGTF+ +  + ++Q T+QR I+ ++   AK ALY   +GL +I        +++++ + +CD   SG I +PDQ++PY+V++ F+ +PG+ G+F+AC FS ++ST++S++N+LA V  ED VKS  P LS+   T +SK +  + GV+ T +A    ++G  +++  + + G+  GP  GLF LGI F   N  GA  G + G+ +   + +G + Y  P  K  P P+S  QC    K ++    P     +  I     S SY+++  +  +  +  G ++SL  GR   E+
Sbjct:    2 EVKNFAVWDYVVFAALFFISSGIGVFFAIKERKKATSREFLVGGRQMSFGPVGLSLTASFMSAVTVLGTPSEVYRFGASFLVFFIAYLFVILLTSELFLPVFYRSGITSTYEYLQLRFNKPVRYAATVIYIVQTILYTGVVVYAPALALNQVTGFDLWGSVFATGIVCTFYCTLGGLKAVVWTDAFQMVVMIVGFLTVLIQGSTHAGGFHNVLEQSTNGSRLHIFDFDVDPLRRHTFWTITVGGTFTWLGIYGVNQSTIQRCISCKTEKHAKLALYFNLLGLWIILVCAVFSGLIMYSHFKDCDPWTSGIISAPDQLMPYFVMEIFATMPGLPGLFVACAFSGTLSTVASSINALATVTFEDFVKSCFPHLSDKLSTWISKGLCLLFGVMCTSMAVAASVMGG-VVQASLSIHGMCGGPMLGLFSLGIVFPFVNWKGALGGLLTGITLSFWVAIGAFIYPAPASKTWPLPLSTDQC---IKSNVTATGPPVLSSRPGIADTWYSISYLYYSAVGCLGCIVAGVIISLITGRQRGED 533          
The following BLAST results are available for this feature:
BLAST of TCONS_00061861 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SC5AC1.502e-8835.07Sodium-coupled monocarboxylate transporter 2 OS=Ho... [more]
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