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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00061842 ID=TCONS_00061842|Name=TCONS_00061842|organism=Clytia hemisphaerica|type=transcript|length=1303bp
GGCTTGGccaggcgatgtcaatcgaactgttcgatgaTCGAACTaatatc
gaactaatcgaacttaatcgaacgattactgttcgattaccgaaccaaat
cgaacagtaatcAAGCCAAGAAATTtcggtaaagttcgattaagtttgat
tgatGTACGATCATGATTCGATGTTAGTTCGATGAGTTCTAtcgtaccgt
aacttggtctaatgtcgacacccctcctctaattctgacaccttttttat
cagctgaaatttatagaaaaggttgaaactgtttttctttgcttagtagt
cagagaggaataatccttttccaatcagtgattcaagctttcatattatt
cctttctctaaaggagggtgtcggaattagacgagggatgtcgatattag
accaacttacggtagttcGATAGAGTTTGATTTTCTTTCGACTGCCTTTA
GCTTTCCGCTCTCCGTCTACACCCCTACAACGTTGACCATTACTTGGCCA
TTGCTTGATTTAGAGTGAATAGGTTCGATTGCAGTTCGACAAGGTTCAAT
CATCGATCGTCGAACATTTATCGAACTACTCGAGTCATCGAACAACATCG
AACagtatttttaatcgaactaattgaactAATCAAGATATTTTTGtggt
aaagttcgattactgttcgattatttatcgtaatcgaacagctatcattc
gattaagtttgattgaGTTTGATGATATGATTCGATTACGAAAATCGGTT
CGATAAAGTTCGGTTGACATTGCCTGGGCTTGATTACCTATGAATTATCG
GAAtcaatcgatatctaatccatgaTGCATGGATTGGTTATCAATTGGTC
ATcgattgaaaattatcgattgtATCGAGTATCGAGTCCAGGGAGGGCCT
GAAGAAGAAGAACATGATGATGATTGAATTGCAATCAATCATTATCTAAC
CTTACCTAACAAATGCCTTGTTGAGTTTGACAAATCCATGAAAAGTTGTG
GCATCAGTGTGTTATCCAAATATCAATCTTTATCAAGTTACAACAAGCCA
AATCATACTCATCTCATCCCTGAATCATACTGTGCTGTGTGTTTTTAGCT
CCTCTTTGATCTATCCAGTCCTATCCATCTCGCATCTCGCCATGTGAGTA
CTACAAGCTAGCTAGGTGtttcttcatctttttttaaaacttttgactTT
TCGGGGGTTCGAACCCACTCGTGAAAAAATGACATAACCACTAGTCCAAC
GCTCTCTCCATCGCGCCACGAGCACTGGTCACATTTCAGATTTTTGATAT
ATT Run BLAST on NCBI transcript from alignment at scaffold_360:324828..326130 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00061842 ID=TCONS_00061842|Name=TCONS_00061842|organism=Clytia hemisphaerica|type=transcript|length=1303bp|location=Sequence derived from alignment at scaffold_360:324828..326130 (Clytia hemisphaerica)
AATATATCAAAAATCTGAAATGTGACCAGTGCTCGTGGCGCGATGGAGAG
AGCGTTGGACTAGTGGTTATGTCATTTTTTCACGAGTGGGTTCGAACCCC
CGAAAagtcaaaagttttaaaaaaagatgaagaaaCACCTAGCTAGCTTG
TAGTACTCACATGGCGAGATGCGAGATGGATAGGACTGGATAGATCAAAG
AGGAGCTAAAAACACACAGCACAGTATGATTCAGGGATGAGATGAGTATG
ATTTGGCTTGTTGTAACTTGATAAAGATTGATATTTGGATAACACACTGA
TGCCACAACTTTTCATGGATTTGTCAAACTCAACAAGGCATTTGTTAGGT
AAGGTTAGATAATGATTGATTGCAATTCAATCATCATCATGTTCTTCTTC
TTCAGGCCCTCCCTGGACTCGATACTCGATacaatcgataattttcaatc
gATGACCAATTGATAACCAATCCATGCAtcatggattagatatcgattga
TTCCGATAATTCATAGGTAATCAAGCCCAGGCAATGTCAACCGAACTTTA
TCGAACCGATTTTCGTAATCGAATCATATCATCAAACtcaatcaaactta
atcgaatgatagctgttcgattacgataaataatcgaacagtaatcgaac
tttaccaCAAAAATATCTTGATTagttcaattagttcgattaaaaatact
GTTCGATGTTGTTCGATGACTCGAGTAGTTCGATAAATGTTCGACGATCG
ATGATTGAACCTTGTCGAACTGCAATCGAACCTATTCACTCTAAATCAAG
CAATGGCCAAGTAATGGTCAACGTTGTAGGGGTGTAGACGGAGAGCGGAA
AGCTAAAGGCAGTCGAAAGAAAATCAAACTCTATCgaactaccgtaagtt
ggtctaatatcgacatccctcgtctaattccgacaccctcctttagagaa
aggaataatatgaaagcttgaatcactgattggaaaaggattattcctct
ctgactactaagcaaagaaaaacagtttcaaccttttctataaatttcag
ctgataaaaaaggtgtcagaattagaggaggggtgtcgacattagaccaa
gttacggtacgaTAGAACTCATCGAACTAACATCGAATCATGATCGTACa
tcaatcaaacttaatcgaactttaccgaAATTTCTTGGCTTgattactgt
tcgatttggttcggtaatcgaacagtaatcgttcgattaagttcgattag
ttcgatattAGTTCGAtcatcgaacagttcgattgacatcgcctggCCAA
GCC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00061842-exon-scaffold_360-1491911889:324828..326130 | TCONS_00061842-exon-scaffold_360-1491911889:324828..326130 | Clytia hemisphaerica | exon |
| TCONS_00061842-exon-scaffold_360-1510915933:324828..326130 | TCONS_00061842-exon-scaffold_360-1510915933:324828..326130 | Clytia hemisphaerica | exon |
| TCONS_00061842-exon-scaffold_360-1575043694:324828..326130 | TCONS_00061842-exon-scaffold_360-1575043694:324828..326130 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_360 | supercontig | scaffold_360:324828..326130 . |
Blast
The following BLAST results are available for this feature:
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