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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00061831 ID=TCONS_00061831|Name=TCONS_00061831|organism=Clytia hemisphaerica|type=transcript|length=1043bp
aaaaaattggaaaaagagaTTGGATTTATGTTGGAACTTTTATTGGATTT
CAAGAAAAAGCCTCTTCCAAACATGAAACGTTTATAATCACTCATCGTTT
GTggaattttcaattatcccAGCCTCAGTCTTTGGCCTATAGCCTATGAA
CTTTTTGTACTGTATATGTTTTATTTGGGCTATtacttttcttagaaaaa
ctttttctgctcactTTGGGCCTCAGTTGAGTATGATAAGTAGATTTTGG
GTTGGGAAATaggtaaaaagtaaaatcataCATAAACATGTTTAAGTGTT
TGAGAGTATTTTGACTTCATGTtatgtttttcttatctttaccaCCACAA
AATTATCCAACAGAATAGAATTTATAAACTATTttcaagcataaaaatat
ttggctgATGCAAActttgtacaaattttatatatttaatgataaagtaa
aaacatctcgtaatttttttatcataatcCTTTGTGACAGTACTTGGGAA
GTTGGAAGCTTTTCCACCGAACAGAATTGAGCACTgataatccaaataaa
aaataatttcagacaGTGCTTTAGGCATCATAACTTTGCCTGAAAATGCA
ATGACTACAAAGTGGATTTGTACCGTCAagggctctaacttgggacagca
attcggcaatcattttaccgaacctccaaagtcatttaattaacatagtc
gcaaatcatagaaaacaaacttgttgtcaacagAGACTTAACagtgaaaa
tacagtccagaAAGTCAACCATCCCATAATATgaccactcgtcccaagtt
agagccgttgatGGTGTGCTGGATATCCAAAACAATAATAATCCATTATA
TGATAAACACAGTCATGTCAATGTCGTAACGTACTTTCAATTTTTGCGGT
ACttccaaaatttcagaattttttggcactttcttcgGATTTGCTTATCC
TTTTCTTGTCCTGGATCCAATCAAAGCCTGTACGTAAAACGTACTACAAA
ATCAGTCACTTTTATAACATTATAACTCGGTCTTTGACGACTG Run BLAST on NCBI transcript from alignment at scaffold_360:38549..39591 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00061831 ID=TCONS_00061831|Name=TCONS_00061831|organism=Clytia hemisphaerica|type=transcript|length=1043bp|location=Sequence derived from alignment at scaffold_360:38549..39591 (Clytia hemisphaerica)
CAGTCGTCAAAGACCGAGTTATAATGTTATAAAAGTGACTGATTTTGTAG
TACGTTTTACGTACAGGCTTTGATTGGATCCAGGACAAGAAAAGGATAAG
CAAATCcgaagaaagtgccaaaaaattctgaaattttggaaGTACCGCAA
AAATTGAAAGTACGTTACGACATTGACATGACTGTGTTTATCATATAATG
GATTATTATTGTTTTGGATATCCAGCACACCatcaacggctctaacttgg
gacgagtggtcATATTATGGGATGGTTGACTTtctggactgtattttcac
tGTTAAGTCTctgttgacaacaagtttgttttctatgatttgcgactatg
ttaattaaatgactttggaggttcggtaaaatgattgccgaattgctgtc
ccaagttagagccctTGACGGTACAAATCCACTTTGTAGTCATTGCATTT
TCAGGCAAAGTTATGATGCCTAAAGCACtgtctgaaattattttttattt
ggattatcAGTGCTCAATTCTGTTCGGTGGAAAAGCTTCCAACTTCCCAA
GTACTGTCACAAAGgattatgataaaaaaattacgagatgtttttacttt
atcattaaatatataaaatttgtacaaagTTTGCATcagccaaatatttt
tatgcttgaaAATAGTTTATAAATTCTATTCTGTTGGATAATTTTGTGGt
ggtaaagataagaaaaacataACATGAAGTCAAAATACTCTCAAACACTT
AAACATGTTTATGtatgattttactttttacctATTTCCCAACCCAAAAT
CTACTTATCATACTCAACTGAGGCCCAAagtgagcagaaaaagtttttct
aagaaaagtaATAGCCCAAATAAAACATATACAGTACAAAAAGTTCATAG
GCTATAGGCCAAAGACTGAGGCTgggataattgaaaattccACAAACGAT
GAGTGATTATAAACGTTTCATGTTTGGAAGAGGCTTTTTCTTGAAATCCA
ATAAAAGTTCCAACATAAATCCAAtctctttttccaatttttt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00061831-exon-scaffold_360-1491911889:38549..39591 | TCONS_00061831-exon-scaffold_360-1491911889:38549..39591 | Clytia hemisphaerica | exon |
| TCONS_00061831-exon-scaffold_360-1510915933:38549..39591 | TCONS_00061831-exon-scaffold_360-1510915933:38549..39591 | Clytia hemisphaerica | exon |
| TCONS_00061831-exon-scaffold_360-1575043694:38549..39591 | TCONS_00061831-exon-scaffold_360-1575043694:38549..39591 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_360 | supercontig | scaffold_360:38549..39591 . |
Blast
The following BLAST results are available for this feature:
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