TCONS_00061795 (transcript) - C. hemisphaerica

Overview
NameTCONS_00061795
Unique NameTCONS_00061795
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2107

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00061795 ID=TCONS_00061795|Name=TCONS_00061795|organism=Clytia hemisphaerica|type=transcript|length=2107bp
AAAAAAAGTTATGTCATATCTGCAAAAGAATGAAAGTCATCATCAAAGAT
TTGAACTTAAGAATACACTTCCAACTCATAATGATGATAATACATCAGAA
AAAATTGTTATTAGTTTGAGTATTACTGTGCTGATTCTTGCAATAATTGT
TATAATATTTTATTGGTATCGCAGTAAACAAGTACCTCTTGGTTATCAAA
GGGTAAAGACAAATAGTGCTATTAGCTCATCTTATAATTCACACCACAAA
CCAAAACTCACTTTGAAATTACCTCAAGTTTCTGTGTCAAATTTTGAGGA
TGAGAGACGAAAATCTATGGGGAGCACAATAGAACGACATTTTTTATCTG
TCAAAGAGCAAGAAAATATAGATGTAACCACTCCTACAACACCCACAACA
CCAATGACACCAATGACACCTTTATCACCATTAACTCCACTTTCACCGTT
ATCATCTAACCATGGTGCTTCTGAGTTTCCAAAGAAAATGGCTTTGTCAA
AATCTATATCACTACCCGCCAAAAGTGTTTTTGCTTCAAAAGACATTAAT
GCTGACGGTTTATGGAGGAATGCTGTGCGGAAAGCTacaaattctcaatt
tttgcaaaGTCACCCTAAACAAAATAAACGAATATCTTATTGTGCCAgtg
gaaaaatcaaattttctttggtttatgatactcaaaatcaaaaagaacTA
ACAATAAAGattcTGGACTTCATTGATTTACCATTATCCAGAGAAACTGG
TATTTCTGTTCCCTTTGTGAAAGTCTATTTGTATCCACAAAATGCTCATG
CTATGCCACTGACAGAAGTTTCCAAGAACCTTGGTGCTTTTAAATTAGAA
ATTTTAAGCTATCCTAAAGAGAATTCATGTACATTCTATGGCTGTCCAAT
CAACAAACTTTGTAGTTCAGCAATCAAATTTGTTATTTTGGATTATGATC
GTTTTTCAAGAAGTGAGTTTGTTGCGGATAGTGTTATTTTGTTAGACGAA
GTCTCTCTAGAAGGTGAAGCAATTACAAAGCATCTCAATGTACGTCGAAC
TAATGTgGATACTGATATGGGTAGTTTGCTGGTATCTCTATGTTATCAAC
CTGCTGTTTCAAGAATGTGCATTGTTGTACTCAAAGCAAGTGGTTTGCCA
TACCATGGAGAGGGCAGTAGTCATGCTCCAGATCATTTTGTTAAAATCAG
TCTGATGAGAAACAATACAGTGCTGGATAAACGGAGGACAAGAGTCATCA
AAAAGACAATATGTCCTGTTTTCAACGAAAGATTAGTGTTTCCAATTGAT
AACCAAAGTATGCGAAGCCTGGTCTTTGTCTTTGATATTATACGTTACGA
TTCAAAGATCAAACAGGAAAAGATTGCAAATGTTGTACTTGGTAACCATA
GCAATACCAGACAAGTGACACCTCATGAAATCCAACATTTCAATGAAATG
CTTGAATCTCCACAAAGACAAATAGCTGAGTGGCATAAGTTGGTGGTATG
ATactcaaatttatttatttcatttttattccttCCATTCTTTatggttt
ttggaaagttttattttcattttgatctcCAAGACAAGACCTGAAGCAGT
GATATGTAAAAGAGTTTGGGGGTCGCAATTATACTATGTTATGTTTTCTG
CCATAAAAACATAACTTGGCATCCATACCAATAGTTACTTTCGGTGACGT
AAATTTAGATTTAGCtaagaaacttttcattttttggtcTTTTTACTGAC
TCGAGATTTCTGACTCATCACTCAAGATTTCTAGCTCATCACTCGAGATT
TCTGACTCACGACTCGAGATTTCTGACTCGTGACTCGAGATTTCTGACTC
GCGACTCGAGATTTCTGACTCACAACTCGAGATTTCTGACTCACAACTTG
AGATTTCTCACTCACAACTCGAGATTTCTGACTCGTGATTCATGactcaa
tatttttattttctcatccTCTCAATAGATATTCATTGTAACAGTATTCT
TAAAATTGTTCGCCTGGACTTTGCAGATCAGTGGTAAAGTAACACCaagg
ttttctttttgctttaaaCTGACTGGTTGACCTTACTTGCTAAGTGTAAA
ACAGGTA
Run BLAST on NCBI

protein sequence of TCONS_00061795-protein

>TCONS_00061795-protein ID=TCONS_00061795-protein|Name=TCONS_00061795-protein|organism=Clytia hemisphaerica|type=polypeptide|length=499bp
KKVMSYLQKNESHHQRFELKNTLPTHNDDNTSEKIVISLSITVLILAIIV
IIFYWYRSKQVPLGYQRVKTNSAISSSYNSHHKPKLTLKLPQVSVSNFED
ERRKSMGSTIERHFLSVKEQENIDVTTPTTPTTPMTPMTPLSPLTPLSPL
SSNHGASEFPKKMALSKSISLPAKSVFASKDINADGLWRNAVRKATNSQF
LQSHPKQNKRISYCASGKIKFSLVYDTQNQKELTIKILDFIDLPLSRETG
ISVPFVKVYLYPQNAHAMPLTEVSKNLGAFKLEILSYPKENSCTFYGCPI
NKLCSSAIKFVILDYDRFSRSEFVADSVILLDEVSLEGEAITKHLNVRRT
NVDTDMGSLLVSLCYQPAVSRMCIVVLKASGLPYHGEGSSHAPDHFVKIS
LMRNNTVLDKRRTRVIKKTICPVFNERLVFPIDNQSMRSLVFVFDIIRYD
SKIKQEKIANVVLGNHSNTRQVTPHEIQHFNEMLESPQRQIAEWHKLVV
Run BLAST on NCBI

transcript from alignment at scaffold_360:59932..66833-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00061795 ID=TCONS_00061795|Name=TCONS_00061795|organism=Clytia hemisphaerica|type=transcript|length=6902bp|location=Sequence derived from alignment at scaffold_360:59932..66833- (Clytia hemisphaerica)
AAAAAAAGTTATGTCATATCTGCAAAAGAATGAAAGTCATCATCAAAGAT
TTGAACTTAAGAATACACTTCCAACTCATAATGATGATAATACATCAGAA
AAAATTGTTATTAGTTTGAGTATTACTGTGCTGATTCTTGCAATAATTGT
TATAATATTTTATTGGTATCGCAGTAAACAAGTACCTCTTGGTTATCAAA
GGGTAAAGACAAATAGTGCTATTAGCTCATCTTATAATTCACACCACAAA
CCAAAACTCACTTTGAAATTACCTCAAGTTTCTGTGTCAAATTTTGAGGA
TGAGAGACGAAAATCTATGGGGAGCACAATAGAACGACATTTTTTATCTG
TCAAAGAGCAAGAAAATATAGATGTAACCACTCCTACAACACCCACAACA
CCAATGACACCAATGACACCTTTATCACCATTAACTCCACTTTCACCGTT
ATCATCTAACCATGGTGCTTCTGAGTTTCCAAAGAAAATGGCTTTGTCAA
AATCTATATCACTACCCGCCAAAAGTGTTTTTGCTTCAAAAGACATTAAT
GCTGACGGTTTATGGAGGAATGCTGTGCGGAAAGCTACAAATTCTCAATT
TTTGCAAAGTCACCCTAAACAAAATAAACGAATATCTTATTGTGCCAGTG
GAAAAATCAAATTTTCTTTGGTTTATGATACTCAAAATCAAAAAGAACTA
ACAATAAAGGTACTGTATATATAATTTNNNNNNNTAGCTGTCAACTCTCC
TGCATCATTGAGTGGGATACTCTCACCAGCTCTCACATGCCAACAATTTC
TTCGGCATGAAAAAAATTCTGCCAAATCTCTGCCAAATTTCTGGGATTTT
CTTCTCTCGCATTTCCAAAAATTTTCTGATTGAAAAAGGTTTCACAACAG
GTTTTGAAAGAACGAACAGGCAAATCTTCTTGATTTTGGAACATCAGAAC
AAAAAATCCCTGATTTCCTGATTTTCTGATTTTGAAAAATTGGATTATTA
TTAATTGGGGAAATTTTTCTGACTTGGAGCTCTCCCGCATTCGCATTTTG
GTGAGGCGAAGTTGTCAGCTATGTTATCAGCTATGTTATGAAACATCAAT
GTTCGGGCCTGAAGTATATTCATATATTTTGCTATTTGGCCCAAAAATGT
TTGGGTTCTGATCTGGCCATCCATACCGTGGACAGATTTTCCAAAATTTT
TGTTTTTCTCTGGTCTTTCTCAGTTTTACTGTATATACTGGTTTTACACA
CTTATAGTGTACACTTTCTCAGTTCAACCCTTACAGTGCATTTTGGGAAG
CCTGAAAAACTCGCCCTGTTGCTAACTTCTTTTCTATATAGAATAAATAG
AGTAAGGGTGATTTTTCTGAAACTAGAGCTGAGATTTTTTCTTCCATACA
TCAGCCATTTTTCTTGCTTTGGTTGTACTAGGGCCTAATCTAGGCGCTGT
ATGTTGTTTTCCTTTTTCTGCATTTTGATGTATCCTGTATAGGAAACCCT
TCCATATTTGACAACACATAACATCGAGTTGGTGTTATCTTCTCAATAAT
GATAGATATGTAATGCATGGGATTTCACATCAACTTGGATTATATACTTT
AGATTACTGAAAAAACAACAACAATCAAACTCTAGTTTTCTGGGATGAAA
GTACTGTAATAGATCCAGATAATTAAAAGAACCAAATCAGGGCATAAGCT
ATGAGTCAAACTTCCTTCTTGCCTGTTGTGAATTAGGCTTATATGGAATG
GTTGGTCAGAATGGTGAAAATCTGCAAAAACAAGCATCATACACCATACG
GAGGCAACGTCAATGAATTACTGGAAATTACACCCCTACCACACCATAAC
ATAAATTTGATGTTATGTGTTGTCAAATGAATATGGATTGGCCCCTTTAG
TGGGTTTTTTCGGTCAAGATTCTGACAAGGTTACAGTTTCTAAAAGTGCA
CTCCAAAGATGGAGGGAAGAGAAAATGCACTATGAGGGTTTAAAACTACG
AAAAAAATTGACAAAGTGTTTTGAAAAATATTTAAATTATGCACTTGCAT
ATAAGACTAAATTAATAACTTTATATATTAATATCTTTCAAATTCATTTT
TCAGACTAAAAAAAGTTATGTCATATCTGCAAAAGAATGAAAGTCATCAT
CAAAGATTTGAACTTAAGAATACACTTCCAACTCATAATGATGATAATAC
ATCAGAAAAAATTGTTATTAGTTTGAGTATTACTGTGCTGATTCTTGCAA
TAATTGTTATAATATTTTATTGGTATCGCAGTAAACAAGTACCTCTTGGT
TATCAAAGGGTAAAGACAAATAGTGCTATTAGCTCATCTTATAATTCACA
CCACAAACCAAAACTCACTTTGAAATTACCTCAAGTTTCTGTGTCAAATT
TTGAGGATGAGAGACGAAAATCTATGGGGAGCACAATAGAACGACATTTT
TTATCTGTCAAAGAGCAAGAAAATATAGATGTAACCACTCCTACAACACC
CACAACACCAATGACACCAATGACACCTTTATCACCATTAACTCCACTTT
CACCGTTATCATCTAACCATGGTGCTTCTGAGTTTCCAAAGAAAATGGCT
TTGTCAAAATCTATATCACTACCCGCCAAAAGTGTTTTTGCTTCAAAAGA
CATTAATGCTGACGGTTTATGGAGGAATGCTGTGCGGAAAGCTACAAATT
CTCAATTTTTGCAAAGTCACCCTAAACAAAATAAACGAATATCTTATTGT
GCCAGTGGAAAAATCAAATTTTCTTTGGTTTATGATACTCAAAATCAAAA
AGAACTAACAATAAAGGTACTGTATATATAATTTAAGATTTCATATTTAT
CCTGTAACTTTTAATAAGTAGGGCTTTGCTCTTTGTGTTTTTTTTTTTGA
TTTCCAGCGATTGCTTTACAATTTTTCCATTGTCTCAAACTTTCAGATTA
TAGCTTCCATTTTTGTTTTTAGATTCTGGACTTCATTGATTTACCATTAT
CCAGAGAAACTGGTATTTCTGTTCCCTTTGTGAAAGTCTATTTGTATCCA
CAAAATGCTCATGCTATGCCACTGACAGAAGTTTCCAAGAACCTTGGTGC
TTTTAAATTAGAAATTTTAAGCTATCCTAAAGAGAATTCATGTACATTCT
ATGGCTGTCCAATCAACAAACTTTGTAGTTCAGCAATCAAATTTGTTATT
TTGGATTATGATCGTTTTTCAAGAAGTGAGTTTGTTGCGGATAGTGTTAT
TTTGTTAGACGAAGTCTCTCTAGAAGGTGAAGCAATTACAAAGCATCTCA
ATGTACGTCGAACTAATGTGGTAAGATTTTATTTTTTGTATCATATTTAG
ATATCCGTGTAAAAAGTTGTTATATGGAAAAAGTTCTCTGTAATTGCCAC
CAGTTTACACTACTAATAATGTAACAAAGAAAACATGGCAATAAGTTATG
AGGATGCCTATTAATGATCAATAATTTTTGTTCTGTTTTTATTTTAGAAG
AAGTTCTTTTCTCCAGGTTTTTCTTCGGTGTAAAGTCAAACATTTTGGGT
CTTCGATTTACATAACATGATCTAACACTTGATTTATTTTAGGATACTGA
TATGGGTAGTTTGCTGGTATCTCTATGTTATCAACCTGCTGTTTCAAGAA
TGTGCATTGTTGTACTCAAAGCAAGTGGTTTGCCATACCATGGAGAGGGC
AGTAGTCATGCTCCAGGTATGTATGCATTCTTTCAGTGAGTTTTAAGTGG
TTTTCCCTTACAATACAAAAATAGTCTTAGCAATGTTTTTTGTCATAGAC
TTTGGCCATTTCTTTTTGTTTAAAATCTATGAAGTAGCCTGTTTTTGGTT
TTAAGGAGGAATATTTTTGAGTTTTTATTTACAAACAAAACAGTTTTCAA
TCATGTTATTATTATCTATGAAAACAGATAAATCGACTGAGATGTTGTTA
AGTTTTATACAGGATAATCACTCCTTAATCATATCAATTTCCGTATCACT
TGTTATCTTGTTTCCAGAAGGAAAACTATTTAATTTGTGATTTCCTTTAA
ATCAGTTTAAATAGCTGTCTGCCGTCTGTAATGTATCTCTATAAGCAGTT
GTTTTCAATGATAATATATAAACATAAGGGTTTTATAAATCAATTTTAAG
TATAACAGTTTAAAATNATATAAACATAAGGGTTTTATAAATCGATTTTA
AGTATAACAGTTTAAAATGTTTTGCAAAAAAGACAAAATGTCACGTAAGA
AAACAGTGAAATGTTGCAGGATTAGAGGTGGTAACTCGTCCATCTTTTTT
CATAGCATATTTATGAGAATTAGTCAAACACGCTTAGCCCACTTGTACTC
TCATTGATCCATTTCTCTTATCAATTAATGGTTTTTGAATGCCAATATTC
ACTTTTTCTATGCATTAATTAACAGATTAAAAAGGCTTATATCAATCAAA
TGATAGAGCTCTTTAAAAACAGCTTGATAAGCCTACACAAGCTTACGTTT
TTTTTTCTGTAGTGCATTACTCTCCTATTCATTGAAATTAAAAAATAGTC
AAACATTTTTAATAAAGGTTTTAGTTTTACATAAGTGTTCCTGTTTCATA
CCAGACACATGTCTCATATCAGGACAGTGTCTCCTTATTGTTATGTTGTG
CTTTTTTTTAATAAACAACAAACTGTTTTTATTTTCCTTGTTCTGATCAA
TCTTGCTTCATATCTATGTCAATTCAACCTGAAAAAATTAAAATTGATGA
GTAAGCAAAGATATCACTCTTATTGAAGTACAAAACCTTTAAAATTATAA
TCCCTGGGCAGATATCAATAAAATCATAGTTTTTATCCAACCCATTCACA
ACCCTAGTATTGCCTTTTCTGAAACTTAAAGTTCTCAATATTTCTAAAGG
ATAGGTTTCGTTTAAAATGTGCAATTGTAGTTTATCGATAAATACTCAAA
TCCAGCACTAATCAAGTTCATAATTTACCTACCCATTATTGATCATTCCC
ATCAATACCGCCTTTCTCAATATTCAAGGAATTTTACTTATGGTGGGCAA
AATTTTCAGTCTAATTTGAATAATTTGAAGTGGAAGTTATCAATATTTAA
AGCGGTCAAAACAATATTTTTTGCAATAACTTCTACGGGCCATTCCATTT
TATAACCATACAGAGGGGCTGATAGTGATAAACATTTCCAAGGGGGTAAT
TCGAGAAGAATTTCTAGGAGGTGTAAAGAAGTGTTTATTTGTGTTTCCAG
GGGGTAAAAAATTATTCTTAAACTTTCCAGGGGATAAAGGACTGATATTA
GTTCGTCCTCCCTTCACTTTAAGTCATGAAAAGAATTTTTCCAGGTTCCT
TTTTGCAAATTTTCTACCCCCCCCCCAGTATGAAAAAAGCCCAATTTCAG
GCGGTGGTTACACGTAGCCGGGTTGAAATTCACCCCGAGGTGAAATGGAA
AAATAATTCACCCCGGGGTGAAAATCATTTTGGGATACACGTCGGCGAAA
GGCGGGGTGAAAACCCTTTTTTTCAGTTCGGGGTGAAAATTTTAACTTAT
TTTCACCCCAGCGTGAAAACGTAAAGTCTGTCCACGATAAGTGTGCACTC
TTTTTTCTTTTACCTATAACTTTTGAAGAAATTCTTCAATCTTTATAAAT
TTGGTATCGTTAGAGAGATATTTGTGAGTGGAACAATTTGAAATAAAAAA
ATCTTTAAAAAAATTCTAAAAATGAAGGTGATAATAAAGAAGAAAAAAAT
GAAGATCTCAACCCCGGGGTGAGTTCAACCCGCTTAAAAACGGCTTCACC
CCGCCTAAATACGTGTATACAGAAACAGTGTTTTCTTTATAGACCGGAGT
GAAATTCACCCCGGCTAGGAAATTCACCCCGGCTACGTGTAACCGCCGCC
TCAGATGACTTTTTAAAGTGACGTTTCACCCCTATAAAGATGAAAATTGT
AACTATTTCATTTTTTTCATCCCCAGATCATTTTGTTAAAATCAGTCTGA
TGAGAAACAATACAGTGCTGGATAAACGGAGGACAAGAGTCATCAAAAAG
ACAATATGTCCTGTTTTCAACGAAAGATTAGTGTTTCCAATTGATAACCA
AAGTATGCGAAGCCTGGTCTTTGTCTTTGATATTATACGTTACGATTCAA
AGATCAAACAGGAAAAGATTGCAAATGTTGTACTTGGTAACCATAGCAAT
ACCAGACAAGTGACACCTCATGAAATCCAACATTTCAATGAAATGCTTGA
ATCTCCACAAAGACAAATAGCTGAGTGGCATAAGTTGGTGGTATGATACT
CAAATTTATTTATTTCATTTTTATTCCTTCCATTCTTTATGGTTTTTGGA
AAGTTTTATTTTCATTTTGATCTCCAAGACAAGACCTGAAGCAGTGATAT
GTAAAAGAGTTTGGGGGTCGCAATTATACTATGTTATGTTTTCTGCCATA
AAAACATAACTTGGCATCCATACCAATAGTTACTTTCGGTGACGTAAATT
TAGATTTAGCTAAGAAACTTTTCATTTTTTGGTCTTTTTACTGACTCGAG
ATTTCTGACTCATCACTCAAGATTTCTAGCTCATCACTCGAGATTTCTGA
CTCACGACTCGAGATTTCTGACTCGTGACTCGAGATTTCTGACTCGCGAC
TCGAGATTTCTGACTCACAACTCGAGATTTCTGACTCACAACTTGAGATT
TCTCACTCACAACTCGAGATTTCTGACTCGTGATTCATGACTCAATATTT
TTATTTTCTCATCCTCTCAATAGATATTCATTGTAACAGTATTCTTAAAA
TTGTTCGCCTGGACTTTGCAGATCAGTGGTAAAGTAACACCAAGGTTTTC
TTTTTGCTTTAAACTGACTGGTTGACCTTACTTGCTAAGTGTAAAACAGG
TA

Coding sequence (CDS) from alignment at scaffold_360:59932..66833-

>TCONS_00061795 ID=TCONS_00061795|Name=TCONS_00061795|organism=Clytia hemisphaerica|type=CDS|length=6000bp|location=Sequence derived from alignment at scaffold_360:59932..66833- (Clytia hemisphaerica)
ATCATTTTGTTAAAATCAGTCTGATGAGAAACAATACAGTGCTGGATAAA
CGGAGGACAAGAGTCATCAAAAAGACAATATGTCCTGTTTTCAACGAAAG
ATTAGTGTTTCCAATTGATAACCAAAGTATGCGAAGCCTGGTCTTTGTCT
TTGATATTATACGTTACGATTCAAAGATCAAACAGGAAAAGATTGCAAAT
GTTGTACTTGGTAACCATAGCAATACCAGACAAGTGACACCTCATGAAAT
CCAACATTTCAATGAAATGCTTGAATCTCCACAAAGACAAATAGCTGAGT
GGCATAAGTTGGTGGTATGAGATACTGATATGGGTAGTTTGCTGGTATCT
CTATGTTATCAACCTGCTGTTTCAAGAATGTGCATTGTTGTACTCAAAGC
AAGTGGTTTGCCATACCATGGAGAGGGCAGTAGTCATGCTCCAGATTCTG
GACTTCATTGATTTACCATTATCCAGAGAAACTGGTATTTCTGTTCCCTT
TGTGAAAGTCTATTTGTATCCACAAAATGCTCATGCTATGCCACTGACAG
AAGTTTCCAAGAACCTTGGTGCTTTTAAATTAGAAATTTTAAGCTATCCT
AAAGAGAATTCATGTACATTCTATGGCTGTCCAATCAACAAACTTTGTAG
TTCAGCAATCAAATTTGTTATTTTGGATTATGATCGTTTTTCAAGAAGTG
AGTTTGTTGCGGATAGTGTTATTTTGTTAGACGAAGTCTCTCTAGAAGGT
GAAGCAATTACAAAGCATCTCAATGTACGTCGAACTAATGTGAAAAAAGT
TATGTCATATCTGCAAAAGAATGAAAGTCATCATCAAAGATTTGAACTTA
AGAATACACTTCCAACTCATAATGATGATAATACATCAGAAAAAATTGTT
ATTAGTTTGAGTATTACTGTGCTGATTCTTGCAATAATTGTTATAATATT
TTATTGGTATCGCAGTAAACAAGTACCTCTTGGTTATCAAAGGGTAAAGA
CAAATAGTGCTATTAGCTCATCTTATAATTCACACCACAAACCAAAACTC
ACTTTGAAATTACCTCAAGTTTCTGTGTCAAATTTTGAGGATGAGAGACG
AAAATCTATGGGGAGCACAATAGAACGACATTTTTTATCTGTCAAAGAGC
AAGAAAATATAGATGTAACCACTCCTACAACACCCACAACACCAATGACA
CCAATGACACCTTTATCACCATTAACTCCACTTTCACCGTTATCATCTAA
CCATGGTGCTTCTGAGTTTCCAAAGAAAATGGCTTTGTCAAAATCTATAT
CACTACCCGCCAAAAGTGTTTTTGCTTCAAAAGACATTAATGCTGACGGT
TTATGGAGGAATGCTGTGCGGAAAGCTACAAATTCTCAATTTTTGCAAAG
TCACCCTAAACAAAATAAACGAATATCTTATTGTGCCAGTGGAAAAATCA
AATTTTCTTTGGTTTATGATACTCAAAATCAAAAAGAACTAACAATAAAG
ATCATTTTGTTAAAATCAGTCTGATGAGAAACAATACAGTGCTGGATAAA
CGGAGGACAAGAGTCATCAAAAAGACAATATGTCCTGTTTTCAACGAAAG
ATTAGTGTTTCCAATTGATAACCAAAGTATGCGAAGCCTGGTCTTTGTCT
TTGATATTATACGTTACGATTCAAAGATCAAACAGGAAAAGATTGCAAAT
GTTGTACTTGGTAACCATAGCAATACCAGACAAGTGACACCTCATGAAAT
CCAACATTTCAATGAAATGCTTGAATCTCCACAAAGACAAATAGCTGAGT
GGCATAAGTTGGTGGTATGAGATACTGATATGGGTAGTTTGCTGGTATCT
CTATGTTATCAACCTGCTGTTTCAAGAATGTGCATTGTTGTACTCAAAGC
AAGTGGTTTGCCATACCATGGAGAGGGCAGTAGTCATGCTCCAGATTCTG
GACTTCATTGATTTACCATTATCCAGAGAAACTGGTATTTCTGTTCCCTT
TGTGAAAGTCTATTTGTATCCACAAAATGCTCATGCTATGCCACTGACAG
AAGTTTCCAAGAACCTTGGTGCTTTTAAATTAGAAATTTTAAGCTATCCT
AAAGAGAATTCATGTACATTCTATGGCTGTCCAATCAACAAACTTTGTAG
TTCAGCAATCAAATTTGTTATTTTGGATTATGATCGTTTTTCAAGAAGTG
AGTTTGTTGCGGATAGTGTTATTTTGTTAGACGAAGTCTCTCTAGAAGGT
GAAGCAATTACAAAGCATCTCAATGTACGTCGAACTAATGTGAAAAAAGT
TATGTCATATCTGCAAAAGAATGAAAGTCATCATCAAAGATTTGAACTTA
AGAATACACTTCCAACTCATAATGATGATAATACATCAGAAAAAATTGTT
ATTAGTTTGAGTATTACTGTGCTGATTCTTGCAATAATTGTTATAATATT
TTATTGGTATCGCAGTAAACAAGTACCTCTTGGTTATCAAAGGGTAAAGA
CAAATAGTGCTATTAGCTCATCTTATAATTCACACCACAAACCAAAACTC
ACTTTGAAATTACCTCAAGTTTCTGTGTCAAATTTTGAGGATGAGAGACG
AAAATCTATGGGGAGCACAATAGAACGACATTTTTTATCTGTCAAAGAGC
AAGAAAATATAGATGTAACCACTCCTACAACACCCACAACACCAATGACA
CCAATGACACCTTTATCACCATTAACTCCACTTTCACCGTTATCATCTAA
CCATGGTGCTTCTGAGTTTCCAAAGAAAATGGCTTTGTCAAAATCTATAT
CACTACCCGCCAAAAGTGTTTTTGCTTCAAAAGACATTAATGCTGACGGT
TTATGGAGGAATGCTGTGCGGAAAGCTACAAATTCTCAATTTTTGCAAAG
TCACCCTAAACAAAATAAACGAATATCTTATTGTGCCAGTGGAAAAATCA
AATTTTCTTTGGTTTATGATACTCAAAATCAAAAAGAACTAACAATAAAG
ATCATTTTGTTAAAATCAGTCTGATGAGAAACAATACAGTGCTGGATAAA
CGGAGGACAAGAGTCATCAAAAAGACAATATGTCCTGTTTTCAACGAAAG
ATTAGTGTTTCCAATTGATAACCAAAGTATGCGAAGCCTGGTCTTTGTCT
TTGATATTATACGTTACGATTCAAAGATCAAACAGGAAAAGATTGCAAAT
GTTGTACTTGGTAACCATAGCAATACCAGACAAGTGACACCTCATGAAAT
CCAACATTTCAATGAAATGCTTGAATCTCCACAAAGACAAATAGCTGAGT
GGCATAAGTTGGTGGTATGAGATACTGATATGGGTAGTTTGCTGGTATCT
CTATGTTATCAACCTGCTGTTTCAAGAATGTGCATTGTTGTACTCAAAGC
AAGTGGTTTGCCATACCATGGAGAGGGCAGTAGTCATGCTCCAGATTCTG
GACTTCATTGATTTACCATTATCCAGAGAAACTGGTATTTCTGTTCCCTT
TGTGAAAGTCTATTTGTATCCACAAAATGCTCATGCTATGCCACTGACAG
AAGTTTCCAAGAACCTTGGTGCTTTTAAATTAGAAATTTTAAGCTATCCT
AAAGAGAATTCATGTACATTCTATGGCTGTCCAATCAACAAACTTTGTAG
TTCAGCAATCAAATTTGTTATTTTGGATTATGATCGTTTTTCAAGAAGTG
AGTTTGTTGCGGATAGTGTTATTTTGTTAGACGAAGTCTCTCTAGAAGGT
GAAGCAATTACAAAGCATCTCAATGTACGTCGAACTAATGTGAAAAAAGT
TATGTCATATCTGCAAAAGAATGAAAGTCATCATCAAAGATTTGAACTTA
AGAATACACTTCCAACTCATAATGATGATAATACATCAGAAAAAATTGTT
ATTAGTTTGAGTATTACTGTGCTGATTCTTGCAATAATTGTTATAATATT
TTATTGGTATCGCAGTAAACAAGTACCTCTTGGTTATCAAAGGGTAAAGA
CAAATAGTGCTATTAGCTCATCTTATAATTCACACCACAAACCAAAACTC
ACTTTGAAATTACCTCAAGTTTCTGTGTCAAATTTTGAGGATGAGAGACG
AAAATCTATGGGGAGCACAATAGAACGACATTTTTTATCTGTCAAAGAGC
AAGAAAATATAGATGTAACCACTCCTACAACACCCACAACACCAATGACA
CCAATGACACCTTTATCACCATTAACTCCACTTTCACCGTTATCATCTAA
CCATGGTGCTTCTGAGTTTCCAAAGAAAATGGCTTTGTCAAAATCTATAT
CACTACCCGCCAAAAGTGTTTTTGCTTCAAAAGACATTAATGCTGACGGT
TTATGGAGGAATGCTGTGCGGAAAGCTACAAATTCTCAATTTTTGCAAAG
TCACCCTAAACAAAATAAACGAATATCTTATTGTGCCAGTGGAAAAATCA
AATTTTCTTTGGTTTATGATACTCAAAATCAAAAAGAACTAACAATAAAG
ATCATTTTGTTAAAATCAGTCTGATGAGAAACAATACAGTGCTGGATAAA
CGGAGGACAAGAGTCATCAAAAAGACAATATGTCCTGTTTTCAACGAAAG
ATTAGTGTTTCCAATTGATAACCAAAGTATGCGAAGCCTGGTCTTTGTCT
TTGATATTATACGTTACGATTCAAAGATCAAACAGGAAAAGATTGCAAAT
GTTGTACTTGGTAACCATAGCAATACCAGACAAGTGACACCTCATGAAAT
CCAACATTTCAATGAAATGCTTGAATCTCCACAAAGACAAATAGCTGAGT
GGCATAAGTTGGTGGTATGAGATACTGATATGGGTAGTTTGCTGGTATCT
CTATGTTATCAACCTGCTGTTTCAAGAATGTGCATTGTTGTACTCAAAGC
AAGTGGTTTGCCATACCATGGAGAGGGCAGTAGTCATGCTCCAGATTCTG
GACTTCATTGATTTACCATTATCCAGAGAAACTGGTATTTCTGTTCCCTT
TGTGAAAGTCTATTTGTATCCACAAAATGCTCATGCTATGCCACTGACAG
AAGTTTCCAAGAACCTTGGTGCTTTTAAATTAGAAATTTTAAGCTATCCT
AAAGAGAATTCATGTACATTCTATGGCTGTCCAATCAACAAACTTTGTAG
TTCAGCAATCAAATTTGTTATTTTGGATTATGATCGTTTTTCAAGAAGTG
AGTTTGTTGCGGATAGTGTTATTTTGTTAGACGAAGTCTCTCTAGAAGGT
GAAGCAATTACAAAGCATCTCAATGTACGTCGAACTAATGTGAAAAAAGT
TATGTCATATCTGCAAAAGAATGAAAGTCATCATCAAAGATTTGAACTTA
AGAATACACTTCCAACTCATAATGATGATAATACATCAGAAAAAATTGTT
ATTAGTTTGAGTATTACTGTGCTGATTCTTGCAATAATTGTTATAATATT
TTATTGGTATCGCAGTAAACAAGTACCTCTTGGTTATCAAAGGGTAAAGA
CAAATAGTGCTATTAGCTCATCTTATAATTCACACCACAAACCAAAACTC
ACTTTGAAATTACCTCAAGTTTCTGTGTCAAATTTTGAGGATGAGAGACG
AAAATCTATGGGGAGCACAATAGAACGACATTTTTTATCTGTCAAAGAGC
AAGAAAATATAGATGTAACCACTCCTACAACACCCACAACACCAATGACA
CCAATGACACCTTTATCACCATTAACTCCACTTTCACCGTTATCATCTAA
CCATGGTGCTTCTGAGTTTCCAAAGAAAATGGCTTTGTCAAAATCTATAT
CACTACCCGCCAAAAGTGTTTTTGCTTCAAAAGACATTAATGCTGACGGT
TTATGGAGGAATGCTGTGCGGAAAGCTACAAATTCTCAATTTTTGCAAAG
TCACCCTAAACAAAATAAACGAATATCTTATTGTGCCAGTGGAAAAATCA
AATTTTCTTTGGTTTATGATACTCAAAATCAAAAAGAACTAACAATAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_038771XLOC_038771Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00061795-exon-scaffold_360-1575043694:66125..66833TCONS_00061795-exon-scaffold_360-1575043694:66125..66833Clytia hemisphaericaexon
TCONS_00061795-exon-scaffold_360-1575043694:63514..63861TCONS_00061795-exon-scaffold_360-1575043694:63514..63861Clytia hemisphaericaexon
TCONS_00061795-exon-scaffold_360-1575043694:63118..63241TCONS_00061795-exon-scaffold_360-1575043694:63118..63241Clytia hemisphaericaexon
TCONS_00061795-exon-scaffold_360-1575043694:59932..60857TCONS_00061795-exon-scaffold_360-1575043694:59932..60857Clytia hemisphaericaexon
TCONS_00061795-exon-scaffold_360-1510915933:66125..66833TCONS_00061795-exon-scaffold_360-1510915933:66125..66833Clytia hemisphaericaexon
TCONS_00061795-exon-scaffold_360-1510915933:63514..63861TCONS_00061795-exon-scaffold_360-1510915933:63514..63861Clytia hemisphaericaexon
TCONS_00061795-exon-scaffold_360-1510915933:63118..63241TCONS_00061795-exon-scaffold_360-1510915933:63118..63241Clytia hemisphaericaexon
TCONS_00061795-exon-scaffold_360-1510915933:59932..60857TCONS_00061795-exon-scaffold_360-1510915933:59932..60857Clytia hemisphaericaexon
TCONS_00061795-exon-scaffold_360-1491911889:66125..66833TCONS_00061795-exon-scaffold_360-1491911889:66125..66833Clytia hemisphaericaexon
TCONS_00061795-exon-scaffold_360-1491911889:63514..63861TCONS_00061795-exon-scaffold_360-1491911889:63514..63861Clytia hemisphaericaexon
TCONS_00061795-exon-scaffold_360-1491911889:63118..63241TCONS_00061795-exon-scaffold_360-1491911889:63118..63241Clytia hemisphaericaexon
TCONS_00061795-exon-scaffold_360-1491911889:59932..60857TCONS_00061795-exon-scaffold_360-1491911889:59932..60857Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00061795-proteinTCONS_00061795-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_360supercontigscaffold_360:59932..66833 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.293487	0.290632	0.27669	0.346714	0.218802	0.128169	0.0335365	0.0670743	0.00987004	0.0546046	0.00661372	0.0169222	0.0486879	0.011674	0.0136019	0.0255722	0.0140383	0.0232541	0.0341044	0.0206123	0.0528787	0.0357861	0.0780674	0.117337	0.0201413	0.0719276	0.06704	0.0184044	0.096623	0.0892849
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000008C2_dom
Blast
[Close]
BLAST of TCONS_00061795 vs. Swiss-Prot (Human)
Match: SYT7 (Synaptotagmin-7 OS=Homo sapiens GN=SYT7 PE=1 SV=3)

HSP 1 Score: 137.887 bits (346), Expect = 7.116e-35
Identity = 84/282 (29.79%), Postives = 145/282 (51.42%), Query Frame = 2 
Query:  650 GKIKFSLVYDTQNQKELTIKILDFIDLPLSRETGISVPFVKVYLYPQNAHAMPLTEVSKNLGAFKLEILSYPKENSCTFYGCPINKLCSSAIKFVILDYDRFSRSEFVADSVILLDEVSL-EGEAITKHLNVRRTNVDTDMGSLLVSLCYQPAVSRMCIVVLKASGLPYHGEGSSHAPDHFVKISLMRNNTVLDKRRTRVIKKTICPVFNERLVFPIDNQSMRSLVFVFDIIRYDSKIKQEKIANVVLGNHSNTRQVTPHEIQHFNEMLESPQRQIAEWHKL 1492
            G+I+FS+ Y+ Q +  LT+KI+   +LP    +G S PFVK+YL P   H +      KNL     E           F G P  K+    +   +LDYDRFSR++ + +  I L++V L + +   K L    ++     G LL+SLCY P+ + + + ++KA  L     G +  P  +VK+ LM  +  ++K++T  +K+ + P+FNE   F I  + +R    +  ++  D   + + I  + L   S      P E++H+ +M+  P++ +A+WH+L
Sbjct:  137 GRIQFSVGYNFQ-ESTLTVKIMKAQELPAKDFSGTSDPFVKIYLLPDKKHKLETKVKRKNLNPHWNETF--------LFEGFPYEKVVQRILYLQVLDYDRFSRNDPIGEVSIPLNKVDLTQMQTFWKDLKPC-SDGSGSRGELLLSLCYNPSANSIIVNIIKARNLKAMDIGGTSDP--YVKVWLMYKDKRVEKKKTVTMKRNLNPIFNESFAFDIPTEKLRETTIIITVMDKDKLSRNDVIGKIYLSWKSG-----PGEVKHWKDMIARPRQPVAQWHQL 401
The following BLAST results are available for this feature:
BLAST of TCONS_00061795 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SYT77.116e-3529.79Synaptotagmin-7 OS=Homo sapiens GN=SYT7 PE=1 SV=3[more]
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