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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00061725 ID=TCONS_00061725|Name=TCONS_00061725|organism=Clytia hemisphaerica|type=transcript|length=1029bp
CACTACtaacatcctgtgaaaatttcggacctccaagttaccccaatcaa
aatttagcttttttgaaaatgccaaaaacgaaacaattaaaaaacatgtc
cttatcCAAGGAGAACTTACGAGAGGGATCAGAGTGAGCTGATCAATCAA
AAAAAGCCCGTCCGACGCCAGATCTTGGAACTCCTGAAAGCGAAGTGCAT
CAGAAACAGTAAGCATTACGATGTTGAACTTTTAACTAATGaacatttac
aatttttagaagGTTGTATTATGCCGTCTGCTCTTTACAATGTAAAAAGA
ATTGCTTTTAATCAGAATTGTTATCGTCCAATTGTACCTTATTTTGAGAG
AACTGTGTATGGGTGTTTAGATGAGTATACATGTAGACTCCATTAGATGA
AAAGAATACCCAGCAACACAGCCATCGCACGCTTTAAAGTCACATGGTAT
GTAATTANTTTTGAGAGAACTGTGTATGGGTGTTTAGATGAGTTTACATG
TAGACTCCATTAGATGAAAAGAATACCCAGCAACACAGCCATCGCACGCT
TTAAAGTCACATGGTATGTAATTATTGTTTAAATGTATTTATTGAATATC
TTTCATGactttttagatcaaaagtcGAGTGAGACTCCATTAGATGAAAA
GAATACCCAGCAACACAGCCATCGCACGCTTTAAAGTCACATGATATTTA
ATTATTGTTTAAATGTATTTATTGAATATCTTTCATGactttttagatca
aaagtcGAGTGAGACTCCATTAGATTAAAAGAATACCCAGCAACACAGCC
ATCGCACGCTTTAAAGTCACATGGTATGTAATTATTGTTTAAATGTATTT
ATTGAATATCTTTCATGactttttagatcaaaagtcGAGTGAGACTCCAT
TAGATGAAAAGAATACCCAGCAACACAGCCATCGCACACTTTAAAGTCAC
ATGGTATGTAATTATTATTTAAATGTATTTATTGAATATCTTTCATGact
ttttagatcaaaagtcGAGTGAGACTCCA Run BLAST on NCBI transcript from alignment at scaffold_36:537777..538805 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00061725 ID=TCONS_00061725|Name=TCONS_00061725|organism=Clytia hemisphaerica|type=transcript|length=1029bp|location=Sequence derived from alignment at scaffold_36:537777..538805 (Clytia hemisphaerica)
TGGAGTCTCACTCgacttttgatctaaaaagtCATGAAAGATATTCAATA
AATACATTTAAATAATAATTACATACCATGTGACTTTAAAGTGTGCGATG
GCTGTGTTGCTGGGTATTCTTTTCATCTAATGGAGTCTCACTCgactttt
gatctaaaaagtCATGAAAGATATTCAATAAATACATTTAAACAATAATT
ACATACCATGTGACTTTAAAGCGTGCGATGGCTGTGTTGCTGGGTATTCT
TTTAATCTAATGGAGTCTCACTCgacttttgatctaaaaagtCATGAAAG
ATATTCAATAAATACATTTAAACAATAATTAAATATCATGTGACTTTAAA
GCGTGCGATGGCTGTGTTGCTGGGTATTCTTTTCATCTAATGGAGTCTCA
CTCgacttttgatctaaaaagtCATGAAAGATATTCAATAAATACATTTA
AACAATAATTACATACCATGTGACTTTAAAGCGTGCGATGGCTGTGTTGC
TGGGTATTCTTTTCATCTAATGGAGTCTACATGTAAACTCATCTAAACAC
CCATACACAGTTCTCTCAAAANTAATTACATACCATGTGACTTTAAAGCG
TGCGATGGCTGTGTTGCTGGGTATTCTTTTCATCTAATGGAGTCTACATG
TATACTCATCTAAACACCCATACACAGTTCTCTCAAAATAAGGTACAATT
GGACGATAACAATTCTGATTAAAAGCAATTCTTTTTACATTGTAAAGAGC
AGACGGCATAATACAACcttctaaaaattgtaaatgttCATTAGTTAAAA
GTTCAACATCGTAATGCTTACTGTTTCTGATGCACTTCGCTTTCAGGAGT
TCCAAGATCTGGCGTCGGACGGGCTTTTTTTGATTGATCAGCTCACTCTG
ATCCCTCTCGTAAGTTCTCCTTGgataaggacatgttttttaattgtttc
gtttttggcattttcaaaaaagctaaattttgattggggtaacttggagg
tccgaaattttcacaggatgttaGTAGTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00061725-exon-scaffold_36-1491911889:537777..538805 | TCONS_00061725-exon-scaffold_36-1491911889:537777..538805 | Clytia hemisphaerica | exon |
| TCONS_00061725-exon-scaffold_36-1510915933:537777..538805 | TCONS_00061725-exon-scaffold_36-1510915933:537777..538805 | Clytia hemisphaerica | exon |
| TCONS_00061725-exon-scaffold_36-1575043694:537777..538805 | TCONS_00061725-exon-scaffold_36-1575043694:537777..538805 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_36 | supercontig | scaffold_36:537777..538805 . |
Blast
The following BLAST results are available for this feature:
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