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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00061698 ID=TCONS_00061698|Name=TCONS_00061698|organism=Clytia hemisphaerica|type=transcript|length=1211bp
TTAGCAGTTTAATTTGGGAAATCGTCTGACTGATAAAGCAActaatataa
aatgaaattgcaAGAGGCAGAAAATCTGAAgctgcttatataaaaaatgt
tcTAATGATATCGTTTAATTTCCTTTGTAGCTCAGAAATCATCCATAGCC
CAAAGATGGCCACCTCTCAGTAAAGCCAGATGCTCTCAAACAACAAAGCT
CAAAGCAATGTATGGTAGGATGACCTTCAACCCTCCTCTTAGTCAAaaac
caatgacgtcatttgaagtTGATGTGGAATGGAATGATTTGCAATTTCAT
CCAACCGAGAATAGACATAAGCGTGGAGGCGTATACGTATCATATACAAT
GGGTATGAAAAATGGACCGGGCGGATATTTTGGCGTTCAAATGGGCGGAA
CTTATGGTGGATTTATTTTCTCAATTTGGGACGGTGATCGAACATATCGA
CTTtcaaatggaaagaaacaaGTCAAGAAATCCACCAAATTGGTTTGGCC
CATGGATTTAAGAAACTGCAAGCGGAACTGTCAAGATTGTGAACTACCTT
CATTACGGGATATTGCCAAACGAGGTTTTACGACTGGTACTAAATGTATA
ACAAAATATCCAATGAAGGTTGGTGATCGCTATACAGTCAAGCTATCAAA
AGCTGTACCGAGAAAACAAATTCACACTTCACAATTTGGTGGTTTTAGAA
AAGTTCATGAAGAAGTTTTAGGAGAGAAAAACCGTTTCATCAAAGGTTCT
GTCTGGCAAGTTAGTGTCACAATCAAGAAGGGCGCTACACCAGGTAAAAT
TATTCCGGTCGGAACAATCATGTTCGAATCGGACGAAATCGGATTCAACC
GTTTTGGAACATTCGACGAAATGATTGGCTGTAACAAGTGTAACGCTATT
TATCACAAAGACACGCGATATGGACCTATAGTTAGCACAGAGGGGCGGTA
TAAAAGACGCCCTGTTCACATGGAAGCATGGACACGCTATAACGAATCCA
CATGCAAAAAGTATCAAATTTCCGGATCGAAACGAGACTGTAGCCTCTCT
TTCGAAAGTGGCCCATTGACTAAAGGCgtcacaaaatcaagaattaaGCT
TTGGTAAAGTTCTTTTTTGCGAAAAAAGAAGATAAATTTGTAATGGTTAT
CTTTGACGTTCtaatagactggagtcgtttataatgcgtgtaatactaat
aatactaaTAC Run BLAST on NCBI protein sequence of TCONS_00061698-protein >TCONS_00061698-protein ID=TCONS_00061698-protein|Name=TCONS_00061698-protein|organism=Clytia hemisphaerica|type=polypeptide|length=299bp
MYGRMTFNPPLSQKPMTSFEVDVEWNDLQFHPTENRHKRGGVYVSYTMGM
KNGPGGYFGVQMGGTYGGFIFSIWDGDRTYRLSNGKKQVKKSTKLVWPMD
LRNCKRNCQDCELPSLRDIAKRGFTTGTKCITKYPMKVGDRYTVKLSKAV
PRKQIHTSQFGGFRKVHEEVLGEKNRFIKGSVWQVSVTIKKGATPGKIIP
VGTIMFESDEIGFNRFGTFDEMIGCNKCNAIYHKDTRYGPIVSTEGRYKR
RPVHMEAWTRYNESTCKKYQISGSKRDCSLSFESGPLTKGVTKSRIKLW Run BLAST on NCBI transcript from alignment at scaffold_36:1457749..1460437- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00061698 ID=TCONS_00061698|Name=TCONS_00061698|organism=Clytia hemisphaerica|type=transcript|length=2689bp|location=Sequence derived from alignment at scaffold_36:1457749..1460437- (Clytia hemisphaerica)
TTAGCAGTTTAATTTGGGAAATCGTCTGACTGATAAAGCAACTAATATAA
AATGAAATTGCAAGAGGCAGAAAATCTGAAGCTGCTTATATAAAAAATGT
TCTAATGATATCGTTTAATTTCCTTTGTAGCTCAGAAATCATCCATAGCC
CAAAGATGGCCACCTCTCAGTAAAGCCAGATGCTCTCAAACAACAAAGCT
CAAAGCAATGTATGGTAGGATGACCTTCAACCCTCCTCTTAGTCAAAAAC
CAATGACGTCATTTGAAGTTGATGTGGAATGGAATGATTTGCAATTTCAT
CCAACCGAGAATAGACATAAGCGTGGAGGCGTATACGTATCATATACAAT
GGGTATGAAAAATGGACCGGGCGGATATTTTGGCGTTCAAATGGGCGGAA
CTTATGGTAAGATTTTTGTAATCCATAATAAGTGTTTATTAATACCTTAC
GGGGAACACATTTAGGCGAGAAATAATTTTAGCGAGCAGCAAATTTTTTA
TTACTTTGACGGCGCACTTTATTCTTTTAGTTTTGGTGGAAGCTATTTTC
GCAATTGGATTGTAGGGTGATTTTATTGTGAAAAAGAAACTATGTAACTG
ATTTGAAATCGTGTTGCAGGGTGGTTTGCATCTAGCAATTAAATTTAATT
TAAATCTTTAGGTGGATTTATTTTCTCAATTTGGGACGGTGATCGAACAT
ATCGACTTTCAAATGGAAAGAAACAAGTCAAGAAATCCACCAAATTGGTT
TGGCCCATGGATTTAAGAAACTGCAAGCGGAACTGTCAAGATTGTGAACT
ACCTTCATTACGGGATATTGCCAAACGAGGTTTTACGACTGGTACTAAAT
GTATAACAAAATATCCAATGAAGGTATTTGTCCCTCTTCTAAATTAAGAT
AATCCTATGGATCAGACTCAGGGCCAACGTCATGAAATTGTTAGAGCAAT
GAATATAGAGTCTAAGGAGGCGCAACCAAAGAATTTTACTTTGCAAAAAA
GTGAGGGATAATGCTCCCCTGGCCCGGTGGACCCTGAGACTAGTGAAGTG
GTCTAATTATTGCTTCGCTAAAGCGACAGTTGCCTAAGGTAGCCTTTGTC
ATTTGACCCTATATACGGTGAACGGCTTGTGACCAGAGTCAAGTCAGCCC
TTATTATCTGATTTCGGTCGTTAAATAGGTACGATATACTCAAACTTAAT
GGGTCAATTGCAGGTCTTCGACAACCAGGGTGTGCTGCGTCTGGTACACC
ATCACATGCCGTGGGGTAAGACTTACTATAAGTCCTACCTCCGAGGTATT
TAGTCCAGCCAAAGTAACTGACACTACACTAGTAAGATGGGTTAAAATAT
TTTGATTAAAATAGAAAGTTGGAAAAATCAGTTTGTATATTGGAAAAAAT
TGCAAAACGTACGTACATTTTCCTGATGGAACCCCACCCCGCCACCAAGC
TTTCGTACGCTTTTCGAAAGATCCCCCCTCAGGGTGTATGTACTTTTTGA
ATGGTCCCTAAACACACAGTACTTCTCGAAGTGACCATGAAACTATTCCC
ATTCGTACCTTTACTTAAATTTGAGCTTGTTGATCAAAATTGAGTCTCAT
CCAGCATCCAACAGCTTGGAGCAATAAAACTTTTCAATCATCAACTTTCA
GGTTGGTGATCGCTATACAGTCAAGCTATCAAAAGCTGTACCGAGAAAAC
AAATTCACACTTCACAATTTGGTGGTTTTAGAAAAGTTCATGAAGAAGTT
TTAGGAGAGAAAAACCGTTTCATCAAAGGTTTGTAGTAGTCTAGCCTCGT
TCCTGCCTAAAACAGGCTTTTCACGTTATTTGTGAAAGCCAGAGCAAGGT
CTCTACGAATTTGTTTTCAGCATTTTCAAGGTTTTCAAGTTTTTGGGTCA
TTTTAAAGCTGTTTTTCAAGGCTTTTTGGCAAAAATTTTAGTACTTTTCA
AGGTCTCGTAGACACCATGCAGAGATTGAAATGTAACATTTTATTTTTGG
ATTAAGTAATCGTACATGGTCTAAAGCCGGATGATGACCTTTCCCGGATA
TAGGTGTGAAAGATATGCAGTATTGAAAAAATTGTGAAAATTTGCCATGG
CAATGGCGTATATTGAAATGTTCACGGTATATTTTAGTGTATATACATAC
AAAAAAGAGAATCGTGGATTAAAGTCGGTGCGTAAAAGGATGATTATTTT
TACATTATGTCATTATTTTTCAGGTTCTGTCTGGCAAGTTAGTGTCACAA
TCAAGAAGGGCGCTACACCAGGTAAAATTATTCCGGTCGGAACAATCATG
TTCGAATCGGACGAAATCGGATTCAACCGTTTTGGAACATTCGACGAAAT
GATTGGCTGTAACAAGTGTAACGCTATTTATCACAAAGACACGCGATATG
GACCTATAGTTAGCACAGAGGGGCGGTATAAAAGACGCCCTGTTCACATG
GAAGCATGGACACGCTATAACGAATCCACATGCAAAAAGTATCAAATTTC
CGGATCGAAACGAGACTGTAGCCTCTCTTTCGAAAGTGGCCCATTGACTA
AAGGCGTCACAAAATCAAGAATTAAGCTTTGGTAAAGTTCTTTTTTGCGA
AAAAAGAAGATAAATTTGTAATGGTTATCTTTGACGTTCTAATAGACTGG
AGTCGTTTATAATGCGTGTAATACTAATAATACTAATAC Coding sequence (CDS) from alignment at scaffold_36:1457749..1460437- >TCONS_00061698 ID=TCONS_00061698|Name=TCONS_00061698|organism=Clytia hemisphaerica|type=CDS|length=3600bp|location=Sequence derived from alignment at scaffold_36:1457749..1460437- (Clytia hemisphaerica)
GTTCTGTCTGGCAAGTTAGTGTCACAATCAAGAAGGGCGCTACACCAGGT
AAAATTATTCCGGTCGGAACAATCATGTTCGAATCGGACGAAATCGGATT
CAACCGTTTTGGAACATTCGACGAAATGATTGGCTGTAACAAGTGTAACG
CTATTTATCACAAAGACACGCGATATGGACCTATAGTTAGCACAGAGGGG
CGGTATAAAAGACGCCCTGTTCACATGGAAGCATGGACACGCTATAACGA
ATCCACATGCAAAAAGTATCAAATTTCCGGATCGAAACGAGACTGTAGCC
TCTCTTTCGAAAGTGGCCCATTGACTAAAGGCGTCACAAAATCAAGAATT
AAGCTTTGGTAAGTTGGTGATCGCTATACAGTCAAGCTATCAAAAGCTGT
ACCGAGAAAACAAATTCACACTTCACAATTTGGTGGTTTTAGAAAAGTTC
ATGAAGAAGTTTTAGGAGAGAAAAACCGTTTCATCAAAGGTGGATTTATT
TTCTCAATTTGGGACGGTGATCGAACATATCGACTTTCAAATGGAAAGAA
ACAAGTCAAGAAATCCACCAAATTGGTTTGGCCCATGGATTTAAGAAACT
GCAAGCGGAACTGTCAAGATTGTGAACTACCTTCATTACGGGATATTGCC
AAACGAGGTTTTACGACTGGTACTAAATGTATAACAAAATATCCAATGAA
GATGTATGGTAGGATGACCTTCAACCCTCCTCTTAGTCAAAAACCAATGA
CGTCATTTGAAGTTGATGTGGAATGGAATGATTTGCAATTTCATCCAACC
GAGAATAGACATAAGCGTGGAGGCGTATACGTATCATATACAATGGGTAT
GAAAAATGGACCGGGCGGATATTTTGGCGTTCAAATGGGCGGAACTTATG
GTTCTGTCTGGCAAGTTAGTGTCACAATCAAGAAGGGCGCTACACCAGGT
AAAATTATTCCGGTCGGAACAATCATGTTCGAATCGGACGAAATCGGATT
CAACCGTTTTGGAACATTCGACGAAATGATTGGCTGTAACAAGTGTAACG
CTATTTATCACAAAGACACGCGATATGGACCTATAGTTAGCACAGAGGGG
CGGTATAAAAGACGCCCTGTTCACATGGAAGCATGGACACGCTATAACGA
ATCCACATGCAAAAAGTATCAAATTTCCGGATCGAAACGAGACTGTAGCC
TCTCTTTCGAAAGTGGCCCATTGACTAAAGGCGTCACAAAATCAAGAATT
AAGCTTTGGTAAGTTGGTGATCGCTATACAGTCAAGCTATCAAAAGCTGT
ACCGAGAAAACAAATTCACACTTCACAATTTGGTGGTTTTAGAAAAGTTC
ATGAAGAAGTTTTAGGAGAGAAAAACCGTTTCATCAAAGGTGGATTTATT
TTCTCAATTTGGGACGGTGATCGAACATATCGACTTTCAAATGGAAAGAA
ACAAGTCAAGAAATCCACCAAATTGGTTTGGCCCATGGATTTAAGAAACT
GCAAGCGGAACTGTCAAGATTGTGAACTACCTTCATTACGGGATATTGCC
AAACGAGGTTTTACGACTGGTACTAAATGTATAACAAAATATCCAATGAA
GATGTATGGTAGGATGACCTTCAACCCTCCTCTTAGTCAAAAACCAATGA
CGTCATTTGAAGTTGATGTGGAATGGAATGATTTGCAATTTCATCCAACC
GAGAATAGACATAAGCGTGGAGGCGTATACGTATCATATACAATGGGTAT
GAAAAATGGACCGGGCGGATATTTTGGCGTTCAAATGGGCGGAACTTATG
GTTCTGTCTGGCAAGTTAGTGTCACAATCAAGAAGGGCGCTACACCAGGT
AAAATTATTCCGGTCGGAACAATCATGTTCGAATCGGACGAAATCGGATT
CAACCGTTTTGGAACATTCGACGAAATGATTGGCTGTAACAAGTGTAACG
CTATTTATCACAAAGACACGCGATATGGACCTATAGTTAGCACAGAGGGG
CGGTATAAAAGACGCCCTGTTCACATGGAAGCATGGACACGCTATAACGA
ATCCACATGCAAAAAGTATCAAATTTCCGGATCGAAACGAGACTGTAGCC
TCTCTTTCGAAAGTGGCCCATTGACTAAAGGCGTCACAAAATCAAGAATT
AAGCTTTGGTAAGTTGGTGATCGCTATACAGTCAAGCTATCAAAAGCTGT
ACCGAGAAAACAAATTCACACTTCACAATTTGGTGGTTTTAGAAAAGTTC
ATGAAGAAGTTTTAGGAGAGAAAAACCGTTTCATCAAAGGTGGATTTATT
TTCTCAATTTGGGACGGTGATCGAACATATCGACTTTCAAATGGAAAGAA
ACAAGTCAAGAAATCCACCAAATTGGTTTGGCCCATGGATTTAAGAAACT
GCAAGCGGAACTGTCAAGATTGTGAACTACCTTCATTACGGGATATTGCC
AAACGAGGTTTTACGACTGGTACTAAATGTATAACAAAATATCCAATGAA
GATGTATGGTAGGATGACCTTCAACCCTCCTCTTAGTCAAAAACCAATGA
CGTCATTTGAAGTTGATGTGGAATGGAATGATTTGCAATTTCATCCAACC
GAGAATAGACATAAGCGTGGAGGCGTATACGTATCATATACAATGGGTAT
GAAAAATGGACCGGGCGGATATTTTGGCGTTCAAATGGGCGGAACTTATG
GTTCTGTCTGGCAAGTTAGTGTCACAATCAAGAAGGGCGCTACACCAGGT
AAAATTATTCCGGTCGGAACAATCATGTTCGAATCGGACGAAATCGGATT
CAACCGTTTTGGAACATTCGACGAAATGATTGGCTGTAACAAGTGTAACG
CTATTTATCACAAAGACACGCGATATGGACCTATAGTTAGCACAGAGGGG
CGGTATAAAAGACGCCCTGTTCACATGGAAGCATGGACACGCTATAACGA
ATCCACATGCAAAAAGTATCAAATTTCCGGATCGAAACGAGACTGTAGCC
TCTCTTTCGAAAGTGGCCCATTGACTAAAGGCGTCACAAAATCAAGAATT
AAGCTTTGGTAAGTTGGTGATCGCTATACAGTCAAGCTATCAAAAGCTGT
ACCGAGAAAACAAATTCACACTTCACAATTTGGTGGTTTTAGAAAAGTTC
ATGAAGAAGTTTTAGGAGAGAAAAACCGTTTCATCAAAGGTGGATTTATT
TTCTCAATTTGGGACGGTGATCGAACATATCGACTTTCAAATGGAAAGAA
ACAAGTCAAGAAATCCACCAAATTGGTTTGGCCCATGGATTTAAGAAACT
GCAAGCGGAACTGTCAAGATTGTGAACTACCTTCATTACGGGATATTGCC
AAACGAGGTTTTACGACTGGTACTAAATGTATAACAAAATATCCAATGAA
GATGTATGGTAGGATGACCTTCAACCCTCCTCTTAGTCAAAAACCAATGA
CGTCATTTGAAGTTGATGTGGAATGGAATGATTTGCAATTTCATCCAACC
GAGAATAGACATAAGCGTGGAGGCGTATACGTATCATATACAATGGGTAT
GAAAAATGGACCGGGCGGATATTTTGGCGTTCAAATGGGCGGAACTTATG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
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| TCONS_00061698-exon-scaffold_36-1575043694:1460032..1460437 | TCONS_00061698-exon-scaffold_36-1575043694:1460032..1460437 | Clytia hemisphaerica | exon |
| TCONS_00061698-exon-scaffold_36-1575043694:1459565..1459776 | TCONS_00061698-exon-scaffold_36-1575043694:1459565..1459776 | Clytia hemisphaerica | exon |
| TCONS_00061698-exon-scaffold_36-1575043694:1458660..1458786 | TCONS_00061698-exon-scaffold_36-1575043694:1458660..1458786 | Clytia hemisphaerica | exon |
| TCONS_00061698-exon-scaffold_36-1575043694:1457749..1458214 | TCONS_00061698-exon-scaffold_36-1575043694:1457749..1458214 | Clytia hemisphaerica | exon |
| TCONS_00061698-exon-scaffold_36-1510915933:1460032..1460437 | TCONS_00061698-exon-scaffold_36-1510915933:1460032..1460437 | Clytia hemisphaerica | exon |
| TCONS_00061698-exon-scaffold_36-1510915933:1459565..1459776 | TCONS_00061698-exon-scaffold_36-1510915933:1459565..1459776 | Clytia hemisphaerica | exon |
| TCONS_00061698-exon-scaffold_36-1510915933:1458660..1458786 | TCONS_00061698-exon-scaffold_36-1510915933:1458660..1458786 | Clytia hemisphaerica | exon |
| TCONS_00061698-exon-scaffold_36-1510915933:1457749..1458214 | TCONS_00061698-exon-scaffold_36-1510915933:1457749..1458214 | Clytia hemisphaerica | exon |
| TCONS_00061698-exon-scaffold_36-1491911889:1460032..1460437 | TCONS_00061698-exon-scaffold_36-1491911889:1460032..1460437 | Clytia hemisphaerica | exon |
| TCONS_00061698-exon-scaffold_36-1491911889:1459565..1459776 | TCONS_00061698-exon-scaffold_36-1491911889:1459565..1459776 | Clytia hemisphaerica | exon |
| TCONS_00061698-exon-scaffold_36-1491911889:1458660..1458786 | TCONS_00061698-exon-scaffold_36-1491911889:1458660..1458786 | Clytia hemisphaerica | exon |
| TCONS_00061698-exon-scaffold_36-1491911889:1457749..1458214 | TCONS_00061698-exon-scaffold_36-1491911889:1457749..1458214 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_36 | supercontig | scaffold_36:1457749..1460437 - |
Blast
The following BLAST results are available for this feature:
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